AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23003

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23003.t1 MTR_7g108290 98.331 599 9 1 1 598 1 599 0.0 1208
MS.gene23003.t1 MTR_1g088885 76.899 632 132 6 1 629 1 621 0.0 998
MS.gene23003.t1 MTR_4g022330 47.902 572 275 9 30 594 28 583 4.05e-179 521
MS.gene23003.t1 MTR_7g073980 44.034 595 289 11 34 615 31 594 1.29e-162 480
MS.gene23003.t1 MTR_5g016060 40.156 640 317 14 22 629 25 630 3.45e-151 451
MS.gene23003.t1 MTR_4g095430 38.792 629 327 17 25 629 1 595 1.50e-136 412
MS.gene23003.t1 MTR_3g062540 35.057 619 319 15 20 617 7 563 8.92e-117 360
MS.gene23003.t1 MTR_5g016060 37.818 550 277 13 111 629 1 516 7.77e-113 348
MS.gene23003.t1 MTR_3g062540 35.052 582 296 14 56 617 2 521 1.77e-108 337
MS.gene23003.t1 MTR_2g009340 31.373 663 384 12 13 619 20 667 1.19e-107 340
MS.gene23003.t1 MTR_8g078900 35.392 599 312 12 38 575 22 606 4.61e-107 337
MS.gene23003.t1 MTR_2g084595 35.034 588 334 12 34 590 21 591 7.06e-107 336
MS.gene23003.t1 MTR_5g075640 33.773 607 305 11 20 594 8 549 1.15e-106 334
MS.gene23003.t1 MTR_4g093850 33.120 625 347 15 31 602 38 644 3.96e-106 335
MS.gene23003.t1 MTR_8g078900 35.484 589 305 12 48 575 2 576 6.45e-105 331
MS.gene23003.t1 MTR_8g078900 36.364 539 288 10 78 575 42 566 7.01e-100 318
MS.gene23003.t1 MTR_8g090220 33.387 617 308 15 36 604 52 613 4.86e-99 316
MS.gene23003.t1 MTR_1g094850 34.035 570 337 12 38 590 28 575 4.04e-98 313
MS.gene23003.t1 MTR_2g018750 34.570 593 340 14 20 590 9 575 4.40e-97 310
MS.gene23003.t1 MTR_5g075640 33.509 570 283 10 56 594 2 506 1.34e-96 306
MS.gene23003.t1 MTR_8g090220 36.345 498 246 10 36 499 52 512 6.22e-96 304
MS.gene23003.t1 MTR_1g064360 35.294 544 301 12 34 556 24 537 1.07e-95 305
MS.gene23003.t1 MTR_5g032780 37.618 529 275 12 18 506 12 525 4.53e-89 290
MS.gene23003.t1 MTR_2g048390 35.920 451 249 8 26 448 15 453 2.81e-86 277
MS.gene23003.t1 MTR_1g106430 34.451 537 322 11 34 556 26 546 7.08e-86 281
MS.gene23003.t1 MTR_5g015790 36.157 484 265 11 34 498 25 483 1.35e-85 280
MS.gene23003.t1 MTR_4g134210 33.155 561 309 12 27 566 17 532 1.31e-80 266
MS.gene23003.t1 MTR_1g014070 34.105 475 290 9 34 497 25 487 3.15e-80 266
MS.gene23003.t1 MTR_4g093850 33.881 487 258 11 26 462 33 505 2.30e-79 261
MS.gene23003.t1 MTR_8g069330 33.276 583 331 16 39 587 29 587 3.02e-77 257
MS.gene23003.t1 MTR_8g078900 35.011 457 237 8 38 448 22 464 2.51e-76 251
MS.gene23003.t1 MTR_2g084595 33.710 442 250 9 34 448 21 446 1.56e-71 238
MS.gene23003.t1 MTR_8g078900 36.272 397 213 6 78 448 42 424 1.14e-69 232
MS.gene23003.t1 MTR_2g027410 31.959 485 277 10 27 496 17 463 4.36e-66 227
MS.gene23003.t1 MTR_1g082690 27.406 478 286 7 37 503 59 486 1.21e-64 222
MS.gene23003.t1 MTR_4g011530 33.099 426 231 11 204 616 33 417 1.01e-61 212
MS.gene23003.t1 MTR_2g102730 33.105 438 232 10 213 627 24 423 1.52e-58 202
MS.gene23003.t1 MTR_2g027410 31.002 429 243 10 83 496 1 391 4.45e-53 190
MS.gene23003.t1 MTR_4g045767 25.397 567 368 13 45 593 14 543 3.97e-42 160
MS.gene23003.t1 MTR_1g105870 37.900 219 114 4 43 259 38 236 1.18e-41 152
MS.gene23003.t1 MTR_4g074190 26.337 505 289 14 37 499 4 467 7.59e-41 157
MS.gene23003.t1 MTR_4g074190 26.652 454 254 12 84 499 9 421 4.01e-38 148
MS.gene23003.t1 MTR_4g074190 25.052 479 276 14 37 473 4 441 7.60e-32 129
MS.gene23003.t1 MTR_1g035720 27.682 289 148 6 296 575 286 522 1.08e-26 114
MS.gene23003.t1 MTR_2g010890 25.170 441 258 10 102 518 1 393 4.05e-26 112
MS.gene23003.t1 MTR_2g048375 40.580 138 75 3 464 601 1 131 5.92e-21 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23003.t1 AT1G03010 68.837 645 174 9 1 629 1 634 0.0 862
MS.gene23003.t1 AT1G03010 69.055 614 163 9 32 629 5 607 0.0 816
MS.gene23003.t1 AT1G03010 69.055 614 163 9 32 629 31 633 0.0 815
MS.gene23003.t1 AT2G47860 61.231 650 216 12 1 629 1 635 0.0 743
MS.gene23003.t1 AT2G47860 59.138 673 216 13 1 629 1 658 0.0 730
MS.gene23003.t1 AT2G47860 61.205 531 170 11 121 629 1 517 0.0 583
MS.gene23003.t1 AT2G47860 61.205 531 170 11 121 629 1 517 0.0 583
MS.gene23003.t1 AT2G47860 61.269 457 155 7 1 448 1 444 0.0 531
MS.gene23003.t1 AT2G47860 58.333 480 155 8 1 448 1 467 4.10e-180 518
MS.gene23003.t1 AT5G48800 46.540 578 278 8 23 594 28 580 1.83e-174 509
MS.gene23003.t1 AT5G67385 40.129 618 320 13 22 617 10 599 4.98e-141 424
MS.gene23003.t1 AT3G08570 43.194 551 284 11 34 575 32 562 2.76e-140 422
MS.gene23003.t1 AT3G08660 40.842 546 276 11 34 575 32 534 1.08e-133 404
MS.gene23003.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.70e-126 384
MS.gene23003.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.70e-126 384
MS.gene23003.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.70e-126 384
MS.gene23003.t1 AT5G67385 39.347 582 304 12 57 617 1 554 2.70e-126 384
MS.gene23003.t1 AT3G08660 40.232 517 262 11 63 575 1 474 3.79e-121 370
MS.gene23003.t1 AT1G30440 35.434 587 327 12 26 575 15 586 1.37e-111 349
MS.gene23003.t1 AT5G03250 35.593 590 324 13 26 590 15 573 1.77e-106 334
MS.gene23003.t1 AT2G30520 33.445 595 326 13 22 594 15 561 1.58e-105 332
MS.gene23003.t1 AT5G13600 36.538 572 297 16 39 583 29 561 2.79e-101 320
MS.gene23003.t1 AT3G49970 33.956 589 286 16 48 617 6 510 3.17e-98 310
MS.gene23003.t1 AT3G49970 33.956 589 286 16 48 617 6 510 3.17e-98 310
MS.gene23003.t1 AT2G30520 33.036 560 306 12 56 594 2 513 5.69e-95 302
MS.gene23003.t1 AT2G30520 33.036 560 306 12 56 594 2 513 5.69e-95 302
MS.gene23003.t1 AT3G44820 31.940 598 333 11 26 575 12 583 5.20e-94 303
MS.gene23003.t1 AT5G66560 32.039 618 322 9 38 575 21 620 4.20e-92 298
MS.gene23003.t1 AT5G66560 31.908 608 316 9 48 575 2 591 3.72e-90 293
MS.gene23003.t1 AT2G14820 34.375 544 320 13 34 558 25 550 8.95e-90 291
MS.gene23003.t1 AT2G14820 34.375 544 320 13 34 558 25 550 8.95e-90 291
MS.gene23003.t1 AT3G50840 33.333 573 310 10 22 575 2 521 2.62e-88 286
MS.gene23003.t1 AT5G66560 33.582 536 302 7 76 575 64 581 3.39e-88 287
MS.gene23003.t1 AT3G08660 37.915 422 224 9 34 451 32 419 1.78e-87 279
MS.gene23003.t1 AT5G10250 32.184 609 311 16 31 598 44 591 2.50e-87 285
MS.gene23003.t1 AT5G10250 31.886 599 311 15 31 598 44 576 3.21e-84 276
MS.gene23003.t1 AT5G67440 36.059 477 268 10 34 498 25 476 3.64e-84 275
MS.gene23003.t1 AT5G67440 36.059 477 268 10 34 498 25 476 3.64e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT1G67900 33.386 629 356 15 18 600 12 623 9.95e-84 275
MS.gene23003.t1 AT4G31820 35.404 483 265 11 29 498 20 468 4.04e-82 270
MS.gene23003.t1 AT3G50840 33.086 538 288 10 57 575 1 485 7.29e-80 263
MS.gene23003.t1 AT3G50840 33.086 538 288 10 57 575 1 485 7.29e-80 263
MS.gene23003.t1 AT5G67440 36.304 460 256 10 51 498 5 439 9.74e-80 262
MS.gene23003.t1 AT4G37590 32.165 485 271 11 34 501 25 468 1.79e-77 258
MS.gene23003.t1 AT5G03250 34.350 492 270 11 121 590 1 461 3.94e-77 254
MS.gene23003.t1 AT3G26490 35.441 522 270 14 18 498 12 507 5.82e-76 254
MS.gene23003.t1 AT3G26490 35.441 522 270 14 18 498 12 507 5.82e-76 254
MS.gene23003.t1 AT3G26490 35.441 522 270 14 18 498 12 507 5.82e-76 254
MS.gene23003.t1 AT5G47800 32.700 474 287 9 33 496 23 474 1.56e-74 249
MS.gene23003.t1 AT5G47800 32.700 474 287 9 33 496 23 474 1.56e-74 249
MS.gene23003.t1 AT5G47800 32.700 474 287 9 33 496 23 474 1.56e-74 249
MS.gene23003.t1 AT2G23050 32.454 493 268 12 24 505 19 457 2.00e-74 246
MS.gene23003.t1 AT5G47800 32.700 474 287 9 33 496 136 587 3.16e-73 248
MS.gene23003.t1 AT4G31820 34.076 449 249 11 63 498 1 415 8.60e-68 230
MS.gene23003.t1 AT5G66560 31.590 478 242 8 38 448 21 480 8.92e-64 218
MS.gene23003.t1 AT3G26490 33.617 470 259 13 18 453 12 462 4.69e-58 203
MS.gene23003.t1 AT1G52770 34.430 395 209 7 197 575 17 377 6.65e-58 202
MS.gene23003.t1 AT5G64330 34.384 349 202 8 269 596 371 713 7.52e-52 191
MS.gene23003.t1 AT5G64330 34.677 248 135 3 34 256 50 295 5.79e-41 159
MS.gene23003.t1 AT2G23050 32.564 390 209 10 121 505 1 341 1.17e-50 179
MS.gene23003.t1 AT5G64330 41.224 245 129 4 269 503 312 551 4.56e-49 181
MS.gene23003.t1 AT5G64330 34.061 229 124 3 53 256 10 236 5.84e-35 140
MS.gene23003.t1 AT3G15570 36.913 298 142 5 222 499 38 309 5.30e-49 177
MS.gene23003.t1 AT5G64330 41.224 245 129 4 269 503 371 610 6.63e-49 181
MS.gene23003.t1 AT5G64330 34.677 248 135 3 34 256 50 295 2.46e-41 159
MS.gene23003.t1 AT3G19850 25.202 496 303 9 36 497 3 464 8.31e-49 179
MS.gene23003.t1 AT3G22104 29.032 465 265 11 36 483 4 420 3.30e-45 168
MS.gene23003.t1 AT1G50280 25.000 488 309 10 32 492 3 460 1.63e-44 167
MS.gene23003.t1 AT5G48130 27.096 513 292 14 42 534 45 495 1.95e-44 168
MS.gene23003.t1 AT1G50280 24.943 441 282 8 74 492 14 427 1.03e-42 161
MS.gene23003.t1 AT5G17580 27.368 475 302 9 38 503 22 462 1.72e-39 153
MS.gene23003.t1 AT5G17580 27.789 475 300 10 38 503 7 447 2.74e-39 152
MS.gene23003.t1 AT3G03510 28.673 422 226 12 90 501 8 364 1.74e-38 148
MS.gene23003.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.41e-34 136
MS.gene23003.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.41e-34 136
MS.gene23003.t1 AT3G22104 28.133 391 219 8 107 483 3 345 1.41e-34 136

Find 107 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTTTCCTCTTGTTTCT+AGG 0.091654 7.2:+6691751 MS.gene23003:intron
CACCAATCTAAGGGTGTTTC+TGG 0.142169 7.2:-6692212 None:intergenic
GAGAAAATTGTCAAGTAATT+TGG 0.180360 7.2:-6692792 None:intergenic
GAATTGAAGCCTAGTGTTTC+AGG 0.216646 7.2:+6690153 MS.gene23003:CDS
TTTCTAGGAGTGGAAGATTT+AGG 0.247375 7.2:+6691766 MS.gene23003:CDS
TTCTTTACTACGAACAAATA+AGG 0.259310 7.2:+6693392 MS.gene23003:CDS
AGAATTCTCAGAAAAGAATT+TGG 0.264671 7.2:+6691965 MS.gene23003:CDS
AGAGTTGATCAGCAAAATTT+TGG 0.272364 7.2:+6692313 MS.gene23003:CDS
AACTTCTTGTAGAAGTGATT+TGG 0.280903 7.2:+6692523 MS.gene23003:CDS
ATCTTGTTTGGTGGTATTCA+TGG 0.287931 7.2:+6693448 MS.gene23003:CDS
AAGATATCAACCTTGTTAAT+AGG 0.326340 7.2:+6692087 MS.gene23003:CDS
ATTTACCTTGTGAAGTGAAT+AGG 0.350440 7.2:-6691230 None:intergenic
AGAGTTTCCCCACCAATCTA+AGG 0.353136 7.2:-6692222 None:intergenic
GAGAATGAGGTTGAATGATT+TGG 0.354022 7.2:+6693585 MS.gene23003:CDS
AGTATTCGTGGCAGTGGAAC+TGG 0.358592 7.2:+6693721 MS.gene23003:CDS
AGCTGTTGACATCTTCCTTA+AGG 0.360096 7.2:+6692916 MS.gene23003:CDS
TTAAGAATTGAGCTTTGCTT+TGG 0.368579 7.2:-6692764 None:intergenic
TTCTAAAACATTATCAATGA+TGG 0.372684 7.2:+6692187 MS.gene23003:CDS
TGTATAATGTTCGATGTGTT+TGG 0.373596 7.2:-6692026 None:intergenic
CAAAGATCAGGGAGTGGTAT+AGG 0.379986 7.2:+6693481 MS.gene23003:CDS
GGACACAATCAAATCTTGTT+TGG 0.395537 7.2:+6693436 MS.gene23003:CDS
AAACATGAAAGAAATGCTAT+TGG 0.398126 7.2:-6692470 None:intergenic
TTTCTTCGAACGAGTTATAT+CGG 0.401205 7.2:+6692265 MS.gene23003:CDS
ATAGGTTCATCCGAACATTA+AGG 0.402802 7.2:+6693258 MS.gene23003:intron
GAAAGGCTACCAGTTCAAAT+AGG 0.406258 7.2:+6693361 MS.gene23003:CDS
TGCAAAGAGCAACTAACTTC+TGG 0.410485 7.2:+6692137 MS.gene23003:CDS
GGTCAATTTCCTCAAAGATC+AGG 0.415797 7.2:+6693469 MS.gene23003:CDS
AAAGCAAAGCTCAATTCTTA+AGG 0.417656 7.2:+6692766 MS.gene23003:CDS
GAGCTTTGCTTTGGAGATCC+AGG 0.425100 7.2:-6692755 None:intergenic
AGGTTGATATCTTCTGATAA+AGG 0.430627 7.2:-6692077 None:intergenic
AGCACTTGCAGAACTACTTC+CGG 0.434035 7.2:+6692859 MS.gene23003:CDS
ATACCACTCCCTGATCTTTG+AGG 0.435450 7.2:-6693478 None:intergenic
TATGCACATAATTCTCTTCA+AGG 0.435685 7.2:+6692341 MS.gene23003:CDS
TCACTGGAGACATCAGATAT+TGG 0.444897 7.2:-6691181 None:intergenic
GCTTACTACCAACTCAATCT+AGG 0.447056 7.2:+6692435 MS.gene23003:CDS
GTATAATGTTCGATGTGTTT+GGG 0.449390 7.2:-6692025 None:intergenic
ACTTGTACACCTATTTGAAC+TGG 0.460924 7.2:-6693370 None:intergenic
CGCTCCGAGTCCTTAATGTT+CGG 0.462622 7.2:-6693268 None:intergenic
TTCCGTATTAACAGTATTCG+TGG 0.465111 7.2:+6693709 MS.gene23003:CDS
AGGCTTCGAAATGCGATGAA+TGG 0.467453 7.2:+6693412 MS.gene23003:CDS
TTTCCTCTTGTTTCTAGGAG+TGG 0.473410 7.2:+6691756 MS.gene23003:CDS
TCAGGGAGTGGTATAGGAAG+TGG 0.474984 7.2:+6693487 MS.gene23003:CDS
AGCCTAGTGTTTCAGGAAGA+AGG 0.476944 7.2:+6690160 MS.gene23003:CDS
GGAAACCGGGACCGTGGTTG+TGG 0.476979 7.2:-6693754 None:intergenic
TGCCACGAATACTGTTAATA+CGG 0.478280 7.2:-6693711 None:intergenic
CTTGTAACGCGAGCATGATC+CGG 0.480182 7.2:-6692878 None:intergenic
GATCGGTTTACAACTCGATC+AGG 0.481839 7.2:+6692553 MS.gene23003:CDS
GTAAGTCTTCCGACCGTGCC+AGG 0.485055 7.2:+6691828 MS.gene23003:CDS
TACTTGGATGGTAAGATCAC+TGG 0.486316 7.2:-6691197 None:intergenic
TCTTCTGCAATTCAATGTCA+AGG 0.497562 7.2:-6692382 None:intergenic
AAGAGCTGAATCATATCTAA+AGG 0.501938 7.2:+6691992 MS.gene23003:CDS
AATAGGTTGATGCTCCTACT+TGG 0.504109 7.2:-6691213 None:intergenic
AACCAGAAACACCCTTAGAT+TGG 0.511015 7.2:+6692210 MS.gene23003:CDS
CTTCTGCAATTCAATGTCAA+GGG 0.515528 7.2:-6692381 None:intergenic
AAACACATCGAACATTATAC+AGG 0.516060 7.2:+6692028 MS.gene23003:CDS
AAAATGGGAGTTGTAACTCT+TGG 0.524005 7.2:+6690129 None:intergenic
CACAATCAAATCTTGTTTGG+TGG 0.524281 7.2:+6693439 MS.gene23003:CDS
ATAGCTGCAAAATTCTGCTA+TGG 0.525366 7.2:+6691870 MS.gene23003:CDS
GAGTATGAATTTGACAGTCC+TGG 0.526590 7.2:+6692737 MS.gene23003:CDS
GCATGTCTTATGCTTGAACT+TGG 0.528359 7.2:-6690192 None:intergenic
TGAATCATATCTAAAGGAAA+CGG 0.538877 7.2:+6691998 MS.gene23003:CDS
GCATAAGACATGCCACTGAA+TGG 0.541068 7.2:+6690202 MS.gene23003:CDS
ATTAACAGTATTCGTGGCAG+TGG 0.547672 7.2:+6693715 MS.gene23003:CDS
CATTGATTAGCCTATTAACA+AGG 0.548783 7.2:-6692097 None:intergenic
TGCATCTACACCACCTGGCA+CGG 0.550474 7.2:-6691841 None:intergenic
TCATCCGAACATTAAGGACT+CGG 0.556784 7.2:+6693264 MS.gene23003:CDS
GTCAATTTCCTCAAAGATCA+GGG 0.559074 7.2:+6693470 MS.gene23003:CDS
AGAAACACCCTTAGATTGGT+GGG 0.561564 7.2:+6692214 MS.gene23003:CDS
GCCATGCCGCACAAAATGAA+AGG 0.570379 7.2:+6693344 MS.gene23003:CDS
ACCGATGCATAGTTATCTCT+AGG 0.575158 7.2:-6693520 None:intergenic
GATTTGAAGAATTTGCGTGC+AGG 0.575709 7.2:-6693652 None:intergenic
TTGAATTGCAGAAGAAACAA+AGG 0.576448 7.2:+6692390 MS.gene23003:CDS
CTAGTCCACAACCACGGTCC+CGG 0.580906 7.2:+6693749 MS.gene23003:CDS
TCCTAGAGATAACTATGCAT+CGG 0.582662 7.2:+6693519 MS.gene23003:CDS
AAGTAACAAGAATGAGAATG+AGG 0.586252 7.2:+6693572 MS.gene23003:CDS
CAGAAACACCCTTAGATTGG+TGG 0.586270 7.2:+6692213 MS.gene23003:CDS
GGTTGATGCTCCTACTTGGA+TGG 0.586634 7.2:-6691209 None:intergenic
CTTGTAGAAGTGATTTGGAG+AGG 0.587525 7.2:+6692528 MS.gene23003:CDS
TGAATTGCAGAAGAAACAAA+GGG 0.588131 7.2:+6692391 MS.gene23003:CDS
GCACTCGAAGGTGAATTCGT+TGG 0.590719 7.2:-6692599 None:intergenic
AGTGATTTGGAGAGGCGGAT+CGG 0.592594 7.2:+6692536 MS.gene23003:CDS
TCTACACCACCTGGCACGGT+CGG 0.595705 7.2:-6691837 None:intergenic
CTTCCACTCCTAGAAACAAG+AGG 0.596628 7.2:-6691759 None:intergenic
GAGTTTCCCCACCAATCTAA+GGG 0.605139 7.2:-6692221 None:intergenic
ATATCGGTTATGAAATCGAA+GGG 0.606291 7.2:+6692281 MS.gene23003:CDS
AGTGATCTTACCATCCAAGT+AGG 0.606850 7.2:+6691199 MS.gene23003:CDS
CTTCGAAATGCGATGAATGG+AGG 0.608119 7.2:+6693415 MS.gene23003:CDS
GTCCTTCTTCCTGAAACACT+AGG 0.612878 7.2:-6690162 None:intergenic
ATGCACATAATTCTCTTCAA+GGG 0.619987 7.2:+6692342 MS.gene23003:CDS
TGAAAAGGAAACCGGGACCG+TGG 0.620189 7.2:-6693760 None:intergenic
TCAAATGCATCTACACCACC+TGG 0.627222 7.2:-6691846 None:intergenic
TATATCGGTTATGAAATCGA+AGG 0.631995 7.2:+6692280 MS.gene23003:CDS
ATCAACCTATTCACTTCACA+AGG 0.635818 7.2:+6691225 MS.gene23003:CDS
TAGCATAGCAATATTCGAGA+GGG 0.638972 7.2:-6691910 None:intergenic
TTTCCTCAAAGATCAGGGAG+TGG 0.639154 7.2:+6693475 MS.gene23003:CDS
AAAATTATAATACCATTCAG+TGG 0.645788 7.2:-6690214 None:intergenic
GAAACACCCTTAGATTGGTG+GGG 0.662827 7.2:+6692215 MS.gene23003:CDS
GTAGAAGTGATTTGGAGAGG+CGG 0.668323 7.2:+6692531 MS.gene23003:CDS
ATAGCATAGCAATATTCGAG+AGG 0.677800 7.2:-6691911 None:intergenic
AGTCTTCCGACCGTGCCAGG+TGG 0.688935 7.2:+6691831 MS.gene23003:CDS
CATGCTCGCGTTACAAGCGA+CGG 0.689890 7.2:+6692884 MS.gene23003:CDS
TTCGTGGCAGTGGAACTGGA+AGG 0.695731 7.2:+6693725 MS.gene23003:CDS
ATTCTGCTATGGAATCAATG+TGG 0.703925 7.2:+6691881 MS.gene23003:CDS
ACTATAGTCATGAAACTGAG+TGG 0.715336 7.2:-6693795 None:intergenic
ATTGTGTTGTGAGCACTCGA+AGG 0.726239 7.2:-6692611 None:intergenic
GAAGGTCTAGTCCACAACCA+CGG 0.728361 7.2:+6693743 MS.gene23003:CDS
ACGGTCGGAAGACTTACGCG+CGG 0.751124 7.2:-6691822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTATGATAATAATTGA+TGG - chr7.2:6690752-6690771 None:intergenic 15.0%
!! ATAATTATAACATATCAGAA+TGG - chr7.2:6691268-6691287 None:intergenic 15.0%
!! TTATAATTATACATTCAACA+TGG + chr7.2:6691278-6691297 MS.gene23003:intron 15.0%
!!! AATATTATTTTCTAACGTTA+TGG - chr7.2:6693042-6693061 None:intergenic 15.0%
!!! ACTTTTTTCTTTTTTTTTGA+AGG + chr7.2:6690243-6690262 MS.gene23003:intron 15.0%
!!! ATATTATTTTCTAACGTTAT+GGG - chr7.2:6693041-6693060 None:intergenic 15.0%
!!! CTGTATCAAAATAATATTTT+AGG - chr7.2:6690941-6690960 None:intergenic 15.0%
!!! TCAAAATAATATTTTAGGAA+TGG - chr7.2:6690936-6690955 None:intergenic 15.0%
!!! TTTAAAACCTTTTATACTAA+CGG - chr7.2:6691427-6691446 None:intergenic 15.0%
!!! TTTTTATGTAATGCAATAAA+TGG - chr7.2:6691022-6691041 None:intergenic 15.0%
!! AAAATTATAATACCATTCAG+TGG - chr7.2:6690217-6690236 None:intergenic 20.0%
!! TAATTAATGACTGAAATTGT+TGG + chr7.2:6693223-6693242 MS.gene23003:intron 20.0%
!! TGATAACATACTATATAAGA+TGG - chr7.2:6691594-6691613 None:intergenic 20.0%
!!! ATCATTGATAATGTTTTAGA+AGG - chr7.2:6692188-6692207 None:intergenic 20.0%
!!! ATGATATAGATTCAATTTTG+AGG + chr7.2:6692636-6692655 MS.gene23003:CDS 20.0%
!!! TCTCTGAAAATTTCAATTTT+TGG + chr7.2:6691074-6691093 MS.gene23003:intron 20.0%
!!! TGTTGGTTTATTTATCATAT+AGG + chr7.2:6693240-6693259 MS.gene23003:intron 20.0%
!!! TTAATAGTGTTTTCAATAGA+AGG - chr7.2:6692962-6692981 None:intergenic 20.0%
!!! TTCTAAAACATTATCAATGA+TGG + chr7.2:6692187-6692206 MS.gene23003:CDS 20.0%
! AAACATGAAAGAAATGCTAT+TGG - chr7.2:6692473-6692492 None:intergenic 25.0%
! AACCCATTAATGCAAATAAT+TGG - chr7.2:6690896-6690915 None:intergenic 25.0%
! AAGATATCAACCTTGTTAAT+AGG + chr7.2:6692087-6692106 MS.gene23003:CDS 25.0%
! AATTTCATGAAATCTTGAAG+TGG - chr7.2:6690366-6690385 None:intergenic 25.0%
! ACTCCAATTATTTGCATTAA+TGG + chr7.2:6690890-6690909 MS.gene23003:intron 25.0%
! AGAATTCTCAGAAAAGAATT+TGG + chr7.2:6691965-6691984 MS.gene23003:CDS 25.0%
! ATTAGTTCATCAACCATAAT+AGG - chr7.2:6690495-6690514 None:intergenic 25.0%
! CTCCAATTATTTGCATTAAT+GGG + chr7.2:6690891-6690910 MS.gene23003:intron 25.0%
! GAGAAAATTGTCAAGTAATT+TGG - chr7.2:6692795-6692814 None:intergenic 25.0%
! TGAATCATATCTAAAGGAAA+CGG + chr7.2:6691998-6692017 MS.gene23003:CDS 25.0%
! TTCTTTACTACGAACAAATA+AGG + chr7.2:6693392-6693411 MS.gene23003:CDS 25.0%
! TTGCATTTCCAAATTCATTT+AGG - chr7.2:6690789-6690808 None:intergenic 25.0%
!! AAACTTAAGTAACCATTTTG+AGG + chr7.2:6690967-6690986 MS.gene23003:intron 25.0%
!! ATCTTAATTTTCCAATCTCA+AGG - chr7.2:6690621-6690640 None:intergenic 25.0%
!!! CATACTATTGTTTTAGCTTT+TGG + chr7.2:6690763-6690782 MS.gene23003:intron 25.0%
!!! CTTTTCTACTTTTCTGAATT+TGG + chr7.2:6692661-6692680 MS.gene23003:CDS 25.0%
!!! TTGCTTTGATTTGTAAAGAA+AGG + chr7.2:6693193-6693212 MS.gene23003:intron 25.0%
AAACACATCGAACATTATAC+AGG + chr7.2:6692028-6692047 MS.gene23003:CDS 30.0%
AAAGCAAAGCTCAATTCTTA+AGG + chr7.2:6692766-6692785 MS.gene23003:CDS 30.0%
AACTTCTTGTAGAAGTGATT+TGG + chr7.2:6692523-6692542 MS.gene23003:CDS 30.0%
AAGAGCTGAATCATATCTAA+AGG + chr7.2:6691992-6692011 MS.gene23003:CDS 30.0%
AAGTAACAAGAATGAGAATG+AGG + chr7.2:6693572-6693591 MS.gene23003:CDS 30.0%
ATAGCAAAACTACATTTGAC+AGG - chr7.2:6691629-6691648 None:intergenic 30.0%
ATCATGTCATTGTTTGGTAA+AGG - chr7.2:6690667-6690686 None:intergenic 30.0%
ATGCACATAATTCTCTTCAA+GGG + chr7.2:6692342-6692361 MS.gene23003:CDS 30.0%
ATGGTGCAATAATAAGACAT+TGG - chr7.2:6691003-6691022 None:intergenic 30.0%
ATTTACCTTGTGAAGTGAAT+AGG - chr7.2:6691233-6691252 None:intergenic 30.0%
CCAAAAAAATTGTCCATTGT+CGG - chr7.2:6690818-6690837 None:intergenic 30.0%
CTACGTGTATATAATGATTC+AGG + chr7.2:6691139-6691158 MS.gene23003:intron 30.0%
GACATGAAAATTTCAAAGCA+TGG - chr7.2:6691120-6691139 None:intergenic 30.0%
GTATAATGTTCGATGTGTTT+GGG - chr7.2:6692028-6692047 None:intergenic 30.0%
TATGCACATAATTCTCTTCA+AGG + chr7.2:6692341-6692360 MS.gene23003:CDS 30.0%
TGAATTGCAGAAGAAACAAA+GGG + chr7.2:6692391-6692410 MS.gene23003:CDS 30.0%
TGATACACCGTTAGTATAAA+AGG + chr7.2:6691417-6691436 MS.gene23003:intron 30.0%
TGTATAATGTTCGATGTGTT+TGG - chr7.2:6692029-6692048 None:intergenic 30.0%
TTAAGAATTGAGCTTTGCTT+TGG - chr7.2:6692767-6692786 None:intergenic 30.0%
TTGAATTGCAGAAGAAACAA+AGG + chr7.2:6692390-6692409 MS.gene23003:CDS 30.0%
TTTCATATAGCTAACAGATG+AGG - chr7.2:6690712-6690731 None:intergenic 30.0%
TTTCTTCGAACGAGTTATAT+CGG + chr7.2:6692265-6692284 MS.gene23003:CDS 30.0%
! AAGGAACAAGATTTTCACAA+TGG - chr7.2:6692061-6692080 None:intergenic 30.0%
! ATATCGGTTATGAAATCGAA+GGG + chr7.2:6692281-6692300 MS.gene23003:CDS 30.0%
! CATGTTTCTGAATAACTTCT+AGG - chr7.2:6690311-6690330 None:intergenic 30.0%
! GAATGGCTATTTCAATATAG+TGG - chr7.2:6690919-6690938 None:intergenic 30.0%
! TATATCGGTTATGAAATCGA+AGG + chr7.2:6692280-6692299 MS.gene23003:CDS 30.0%
!! AATCAATTGTTTTGCTTAGG+CGG - chr7.2:6693297-6693316 None:intergenic 30.0%
!! AGAGTTGATCAGCAAAATTT+TGG + chr7.2:6692313-6692332 MS.gene23003:CDS 30.0%
!! AGGTTGATATCTTCTGATAA+AGG - chr7.2:6692080-6692099 None:intergenic 30.0%
!! CATTGATTAGCCTATTAACA+AGG - chr7.2:6692100-6692119 None:intergenic 30.0%
!! GACAATCAATTGTTTTGCTT+AGG - chr7.2:6693300-6693319 None:intergenic 30.0%
!! TTCTCTTTTGAAAAGGAAAC+CGG - chr7.2:6693771-6693790 None:intergenic 30.0%
!!! GATTTTGAGTTCTAACCTTA+AGG - chr7.2:6692934-6692953 None:intergenic 30.0%
ACGAAATACCAACACAAACA+CGG + chr7.2:6690520-6690539 MS.gene23003:intron 35.0%
ACTTGTACACCTATTTGAAC+TGG - chr7.2:6693373-6693392 None:intergenic 35.0%
ATAGCATAGCAATATTCGAG+AGG - chr7.2:6691914-6691933 None:intergenic 35.0%
ATAGCTGCAAAATTCTGCTA+TGG + chr7.2:6691870-6691889 MS.gene23003:CDS 35.0%
ATAGGTTCATCCGAACATTA+AGG + chr7.2:6693258-6693277 MS.gene23003:intron 35.0%
ATCAACCTATTCACTTCACA+AGG + chr7.2:6691225-6691244 MS.gene23003:CDS 35.0%
ATTCTGCTATGGAATCAATG+TGG + chr7.2:6691881-6691900 MS.gene23003:CDS 35.0%
CAACCATAATAGGATCTGAA+GGG - chr7.2:6690485-6690504 None:intergenic 35.0%
CTAGAAACAAGAGGAAACTA+GGG - chr7.2:6691753-6691772 None:intergenic 35.0%
CTTCTGCAATTCAATGTCAA+GGG - chr7.2:6692384-6692403 None:intergenic 35.0%
GAAAATTTCAAAGCATGGCA+AGG - chr7.2:6691115-6691134 None:intergenic 35.0%
GAGAATGAGGTTGAATGATT+TGG + chr7.2:6693585-6693604 MS.gene23003:CDS 35.0%
GGACACAATCAAATCTTGTT+TGG + chr7.2:6693436-6693455 MS.gene23003:CDS 35.0%
GGATAAGAATAGCCTCAAAA+TGG - chr7.2:6690982-6691001 None:intergenic 35.0%
GTCAATTTCCTCAAAGATCA+GGG + chr7.2:6693470-6693489 MS.gene23003:CDS 35.0%
TAGCATAGCAATATTCGAGA+GGG - chr7.2:6691913-6691932 None:intergenic 35.0%
TCAACCATAATAGGATCTGA+AGG - chr7.2:6690486-6690505 None:intergenic 35.0%
TCCTAGAGATAACTATGCAT+CGG + chr7.2:6693519-6693538 MS.gene23003:CDS 35.0%
TCTTCTGCAATTCAATGTCA+AGG - chr7.2:6692385-6692404 None:intergenic 35.0%
TGCCACGAATACTGTTAATA+CGG - chr7.2:6693714-6693733 None:intergenic 35.0%
TTCCGTATTAACAGTATTCG+TGG + chr7.2:6693709-6693728 MS.gene23003:CDS 35.0%
TTTGGTAAAGGACTACATCA+AGG - chr7.2:6690655-6690674 None:intergenic 35.0%
! ACATGATGCACGATTTTGAA+TGG + chr7.2:6690680-6690699 MS.gene23003:intron 35.0%
! ACATTCAACATGGTTTTCTC+TGG + chr7.2:6691288-6691307 MS.gene23003:intron 35.0%
! ATCTTGTTTGGTGGTATTCA+TGG + chr7.2:6693448-6693467 MS.gene23003:CDS 35.0%
! CACAATCAAATCTTGTTTGG+TGG + chr7.2:6693439-6693458 MS.gene23003:CDS 35.0%
! GCAAGTGCTATGAATTTTGA+TGG - chr7.2:6692848-6692867 None:intergenic 35.0%
! GCTTTTGGCCTAAATGAATT+TGG + chr7.2:6690778-6690797 MS.gene23003:intron 35.0%
! GGTTTCCTTTTCAAAAGAGA+AGG + chr7.2:6693770-6693789 MS.gene23003:CDS 35.0%
! GTCTTATTGAGTTCGAGTTT+GGG + chr7.2:6690413-6690432 MS.gene23003:intron 35.0%
! TACTTTTCTGAATTTGGACG+AGG + chr7.2:6692667-6692686 MS.gene23003:CDS 35.0%
! TCTGGTTTACATTCCAAGTT+AGG + chr7.2:6691306-6691325 MS.gene23003:intron 35.0%
! TCTTATTGAGTTCGAGTTTG+GGG + chr7.2:6690414-6690433 MS.gene23003:intron 35.0%
! TGTTTGTGTTGGTATTTCGT+AGG - chr7.2:6690520-6690539 None:intergenic 35.0%
! TTTCTAGGAGTGGAAGATTT+AGG + chr7.2:6691766-6691785 MS.gene23003:CDS 35.0%
!! AGTCTTATTGAGTTCGAGTT+TGG + chr7.2:6690412-6690431 MS.gene23003:intron 35.0%
!! TCTCTTTTGAAAAGGAAACC+GGG - chr7.2:6693770-6693789 None:intergenic 35.0%
!!! CCGACAATGGACAATTTTTT+TGG + chr7.2:6690815-6690834 MS.gene23003:intron 35.0%
AACCAGAAACACCCTTAGAT+TGG + chr7.2:6692210-6692229 MS.gene23003:CDS 40.0%
ACCGATGCATAGTTATCTCT+AGG - chr7.2:6693523-6693542 None:intergenic 40.0%
AGAAACACCCTTAGATTGGT+GGG + chr7.2:6692214-6692233 MS.gene23003:CDS 40.0%
AGCTGTTGACATCTTCCTTA+AGG + chr7.2:6692916-6692935 MS.gene23003:CDS 40.0%
AGTGATCTTACCATCCAAGT+AGG + chr7.2:6691199-6691218 MS.gene23003:CDS 40.0%
ATCAATGTCCGTGTTTGTGT+TGG - chr7.2:6690531-6690550 None:intergenic 40.0%
ATTAACAGTATTCGTGGCAG+TGG + chr7.2:6693715-6693734 MS.gene23003:CDS 40.0%
CCTAGAAACAAGAGGAAACT+AGG - chr7.2:6691754-6691773 None:intergenic 40.0%
CTATTCATTGCCACCTAACT+TGG - chr7.2:6691322-6691341 None:intergenic 40.0%
GAAAGGCTACCAGTTCAAAT+AGG + chr7.2:6693361-6693380 MS.gene23003:CDS 40.0%
GAATTGAAGCCTAGTGTTTC+AGG + chr7.2:6690153-6690172 MS.gene23003:CDS 40.0%
GAGTATGAATTTGACAGTCC+TGG + chr7.2:6692737-6692756 MS.gene23003:CDS 40.0%
GATTTGAAGAATTTGCGTGC+AGG - chr7.2:6693655-6693674 None:intergenic 40.0%
GCATGTCTTATGCTTGAACT+TGG - chr7.2:6690195-6690214 None:intergenic 40.0%
GCTTACTACCAACTCAATCT+AGG + chr7.2:6692435-6692454 MS.gene23003:CDS 40.0%
GGTCAATTTCCTCAAAGATC+AGG + chr7.2:6693469-6693488 MS.gene23003:CDS 40.0%
GGTTTACATTCCAAGTTAGG+TGG + chr7.2:6691309-6691328 MS.gene23003:intron 40.0%
GTTAGGTGGCAATGAATAGT+TGG + chr7.2:6691323-6691342 MS.gene23003:intron 40.0%
GTTATTGGACACCTTGAGAT+TGG + chr7.2:6690607-6690626 MS.gene23003:intron 40.0%
TACTTGGATGGTAAGATCAC+TGG - chr7.2:6691200-6691219 None:intergenic 40.0%
TCACTGGAGACATCAGATAT+TGG - chr7.2:6691184-6691203 None:intergenic 40.0%
TCATCCGAACATTAAGGACT+CGG + chr7.2:6693264-6693283 MS.gene23003:CDS 40.0%
TCGTGCATCATGTCATTGTT+TGG - chr7.2:6690673-6690692 None:intergenic 40.0%
TGCAAAGAGCAACTAACTTC+TGG + chr7.2:6692137-6692156 MS.gene23003:CDS 40.0%
! CCAAGAGCTCAAAAGCATAA+TGG - chr7.2:6691663-6691682 None:intergenic 40.0%
! CCATTATGCTTTTGAGCTCT+TGG + chr7.2:6691660-6691679 MS.gene23003:intron 40.0%
! CCTAGTTTCCTCTTGTTTCT+AGG + chr7.2:6691751-6691770 MS.gene23003:intron 40.0%
! CTTATTGAGTTCGAGTTTGG+GGG + chr7.2:6690415-6690434 MS.gene23003:intron 40.0%
! CTTGTAGAAGTGATTTGGAG+AGG + chr7.2:6692528-6692547 MS.gene23003:CDS 40.0%
! GAGCTTTTCCTAGATTGAGT+TGG - chr7.2:6692446-6692465 None:intergenic 40.0%
! TGGTAGCCTTTCATTTTGTG+CGG - chr7.2:6693353-6693372 None:intergenic 40.0%
! TGTTAGTGTCGTGTCGTTAT+TGG + chr7.2:6690592-6690611 MS.gene23003:intron 40.0%
! TTATGCTTTTGAGCTCTTGG+TGG + chr7.2:6691663-6691682 MS.gene23003:intron 40.0%
! TTTTCTGAATTTGGACGAGG+TGG + chr7.2:6692670-6692689 MS.gene23003:CDS 40.0%
!! AATAGGTTGATGCTCCTACT+TGG - chr7.2:6691216-6691235 None:intergenic 40.0%
!! TGGCACCTTCTCTTTTGAAA+AGG - chr7.2:6693778-6693797 None:intergenic 40.0%
!! TTTCCTCTTGTTTCTAGGAG+TGG + chr7.2:6691756-6691775 MS.gene23003:CDS 40.0%
!!! CAGGAAGAGTCTTTTTTTGC+AGG + chr7.2:6691158-6691177 MS.gene23003:intron 40.0%
AATGCAAAGCTCACCGACAA+TGG + chr7.2:6690802-6690821 MS.gene23003:intron 45.0%
AGAGTTGAATCAGTGTGTCG+CGG - chr7.2:6693171-6693190 None:intergenic 45.0%
AGAGTTTCCCCACCAATCTA+AGG - chr7.2:6692225-6692244 None:intergenic 45.0%
AGCACTTGCAGAACTACTTC+CGG + chr7.2:6692859-6692878 MS.gene23003:CDS 45.0%
AGCCTAGTGTTTCAGGAAGA+AGG + chr7.2:6690160-6690179 MS.gene23003:CDS 45.0%
AGGCTTCGAAATGCGATGAA+TGG + chr7.2:6693412-6693431 MS.gene23003:CDS 45.0%
ATACCACTCCCTGATCTTTG+AGG - chr7.2:6693481-6693500 None:intergenic 45.0%
ATTGGAGTTTCACGCTAGCA+TGG - chr7.2:6690878-6690897 None:intergenic 45.0%
ATTGTGTTGTGAGCACTCGA+AGG - chr7.2:6692614-6692633 None:intergenic 45.0%
CAAAGATCAGGGAGTGGTAT+AGG + chr7.2:6693481-6693500 MS.gene23003:CDS 45.0%
CAGAAACACCCTTAGATTGG+TGG + chr7.2:6692213-6692232 MS.gene23003:CDS 45.0%
CCATAATAGGATCTGAAGGG+AGG - chr7.2:6690482-6690501 None:intergenic 45.0%
CCTCCCTTCAGATCCTATTA+TGG + chr7.2:6690479-6690498 MS.gene23003:intron 45.0%
CTTCCACTCCTAGAAACAAG+AGG - chr7.2:6691762-6691781 None:intergenic 45.0%
CTTCGAAATGCGATGAATGG+AGG + chr7.2:6693415-6693434 MS.gene23003:CDS 45.0%
GAAACACCCTTAGATTGGTG+GGG + chr7.2:6692215-6692234 MS.gene23003:CDS 45.0%
GAGTTTCCCCACCAATCTAA+GGG - chr7.2:6692224-6692243 None:intergenic 45.0%
GCATAAGACATGCCACTGAA+TGG + chr7.2:6690202-6690221 MS.gene23003:CDS 45.0%
GTCCTTCTTCCTGAAACACT+AGG - chr7.2:6690165-6690184 None:intergenic 45.0%
TCAAATGCATCTACACCACC+TGG - chr7.2:6691849-6691868 None:intergenic 45.0%
TTTCCTCAAAGATCAGGGAG+TGG + chr7.2:6693475-6693494 MS.gene23003:CDS 45.0%
! GATCGGTTTACAACTCGATC+AGG + chr7.2:6692553-6692572 MS.gene23003:CDS 45.0%
! GTAGAAGTGATTTGGAGAGG+CGG + chr7.2:6692531-6692550 MS.gene23003:CDS 45.0%
!! CACCAATCTAAGGGTGTTTC+TGG - chr7.2:6692215-6692234 None:intergenic 45.0%
AGTATTCGTGGCAGTGGAAC+TGG + chr7.2:6693721-6693740 MS.gene23003:CDS 50.0%
CGCTCCGAGTCCTTAATGTT+CGG - chr7.2:6693271-6693290 None:intergenic 50.0%
CTTGTAACGCGAGCATGATC+CGG - chr7.2:6692881-6692900 None:intergenic 50.0%
GAAGGTCTAGTCCACAACCA+CGG + chr7.2:6693743-6693762 MS.gene23003:CDS 50.0%
GCACTCGAAGGTGAATTCGT+TGG - chr7.2:6692602-6692621 None:intergenic 50.0%
GCCATGCCGCACAAAATGAA+AGG + chr7.2:6693344-6693363 MS.gene23003:CDS 50.0%
TCAGGGAGTGGTATAGGAAG+TGG + chr7.2:6693487-6693506 MS.gene23003:CDS 50.0%
! AGTGATTTGGAGAGGCGGAT+CGG + chr7.2:6692536-6692555 MS.gene23003:CDS 50.0%
! GCCTTTCATTTTGTGCGGCA+TGG - chr7.2:6693348-6693367 None:intergenic 50.0%
! GGTTGATGCTCCTACTTGGA+TGG - chr7.2:6691212-6691231 None:intergenic 50.0%
!! GAGCTTTGCTTTGGAGATCC+AGG - chr7.2:6692758-6692777 None:intergenic 50.0%
CATGCTCGCGTTACAAGCGA+CGG + chr7.2:6692884-6692903 MS.gene23003:CDS 55.0%
TGAAAAGGAAACCGGGACCG+TGG - chr7.2:6693763-6693782 None:intergenic 55.0%
TGCATCTACACCACCTGGCA+CGG - chr7.2:6691844-6691863 None:intergenic 55.0%
TTCGTGGCAGTGGAACTGGA+AGG + chr7.2:6693725-6693744 MS.gene23003:CDS 55.0%
ACGGTCGGAAGACTTACGCG+CGG - chr7.2:6691825-6691844 None:intergenic 60.0%
ATCAGTGTGTCGCGGCAGCA+AGG - chr7.2:6693163-6693182 None:intergenic 60.0%
CTAGTCCACAACCACGGTCC+CGG + chr7.2:6693749-6693768 MS.gene23003:CDS 60.0%
GTAAGTCTTCCGACCGTGCC+AGG + chr7.2:6691828-6691847 MS.gene23003:CDS 60.0%
TCTACACCACCTGGCACGGT+CGG - chr7.2:6691840-6691859 None:intergenic 60.0%
AGTCTTCCGACCGTGCCAGG+TGG + chr7.2:6691831-6691850 MS.gene23003:CDS 65.0%
GGAAACCGGGACCGTGGTTG+TGG - chr7.2:6693757-6693776 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 6690132 6693810 6690132 ID=MS.gene23003
chr7.2 mRNA 6690132 6693810 6690132 ID=MS.gene23003.t1;Parent=MS.gene23003
chr7.2 exon 6690132 6690223 6690132 ID=MS.gene23003.t1.exon1;Parent=MS.gene23003.t1
chr7.2 CDS 6690132 6690223 6690132 ID=cds.MS.gene23003.t1;Parent=MS.gene23003.t1
chr7.2 exon 6691180 6691246 6691180 ID=MS.gene23003.t1.exon2;Parent=MS.gene23003.t1
chr7.2 CDS 6691180 6691246 6691180 ID=cds.MS.gene23003.t1;Parent=MS.gene23003.t1
chr7.2 exon 6691756 6692937 6691756 ID=MS.gene23003.t1.exon3;Parent=MS.gene23003.t1
chr7.2 CDS 6691756 6692937 6691756 ID=cds.MS.gene23003.t1;Parent=MS.gene23003.t1
chr7.2 exon 6693262 6693810 6693262 ID=MS.gene23003.t1.exon4;Parent=MS.gene23003.t1
chr7.2 CDS 6693262 6693810 6693262 ID=cds.MS.gene23003.t1;Parent=MS.gene23003.t1
Gene Sequence

>MS.gene23003

ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGAAGAAGGACTTTTCGTCCAAGTTCAAGCATAAGACATGCCACTGAATGGTATTATAATTTTCTTACTACTTTTTTCTTTTTTTTTGAAGGATTCTTACTACTTCTAGAAGTTTTTATTTATTTACACATATTCCTAGAAGTTATTCAGAAACATGCAAGTGTCTAAGTCTGTCTCATATCTATAATACCACTTCAAGATTTCATGAAATTCAACAATACTTGAATGAGCTGACACAAGTCTTATTGAGTTCGAGTTTGGGGGTCTTACACAACATCAACGTTAAAGCTCTTGAGATAGCTATACCTCCCTTCAGATCCTATTATGGTTGATGAACTAATTTCCTACGAAATACCAACACAAACACGGACATTGATAACAATTTAAGAAAATGAACGTAGTCAAATATAACTAATCGTGTTAGTGTCGTGTCGTTATTGGACACCTTGAGATTGGAAAATTAAGATGTAAAATTTGACCTTGATGTAGTCCTTTACCAAACAATGACATGATGCACGATTTTGAATGGTTTAGACCTCATCTGTTAGCTATATGAAACAATTGATGTTTTTCATCCATCAATTATTATCATACTATTGTTTTAGCTTTTGGCCTAAATGAATTTGGAAATGCAAAGCTCACCGACAATGGACAATTTTTTTGGCTTCACATAGAACATGACAACTGTGAAATCAACTTGACCATGCTAGCGTGAAACTCCAATTATTTGCATTAATGGGTTCCACTATATTGAAATAGCCATTCCTAAAATATTATTTTGATACAGAAATCAAAACTTAAGTAACCATTTTGAGGCTATTCTTATCCAATGTCTTATTATTGCACCATTTATTGCATTACATAAAAAATATATGCTAATAGAGTAGTCTCTTTCAAATGTCTCTGAAAATTTCAATTTTTGGTAATAATAATGTACGCCTTGCCATGCTTTGAAATTTTCATGTCTACGTGTATATAATGATTCAGGAAGAGTCTTTTTTTGCAGGCCAATATCTGATGTCTCCAGTGATCTTACCATCCAAGTAGGAGCATCAACCTATTCACTTCACAAGGTAAATTAAAACAATCTTCCATTCTGATATGTTATAATTATACATTCAACATGGTTTTCTCTGGTTTACATTCCAAGTTAGGTGGCAATGAATAGTTGGCAATTTTCTAAGTAGATCATTATAATTTTGCTATGAACATACATAGTTAATTAATTTTATGAGTTTAATTTTGATACACCGTTAGTATAAAAGGTTTTAAATCGTCAACAAATCACAAACAATCATATCTGTGACTTAAGAAATAGTTGTGATTAATAAAATCAAACATTTTTAATGATCAGACGATAATGATTGATTGACAACGTAAAAAAAATCTTTATAATGATACTGTATATGAATTCAATCCATCTTATATAGTATGTTATCAGCAGATAATTTTCCTGTCAAATGTAGTTTTGCTATATGTGTAGTTTCCATTATGCTTTTGAGCTCTTGGTGGCTTCTTTTCATGCATCATTATGCATATTTTCTCACTACTTTGTACTTAAACTCTTGTTATTTTTCCCTAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGGAAGCTGCTATCTGAATCAAAAGATTCTAAAGTTCCGCGCGTAAGTCTTCCGACCGTGCCAGGTGGTGTAGATGCATTTGAAATAGCTGCAAAATTCTGCTATGGAATCAATGTGGAATTCACCCTCTCGAATATTGCTATGCTATATTGTATATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAAAAGAATTTGGTGACAAGAGCTGAATCATATCTAAAGGAAACGGTACTCCCAAACACATCGAACATTATACAGGTTCTTCACCATTGTGAAAATCTTGTTCCTTTATCAGAAGATATCAACCTTGTTAATAGGCTAATCAATGCAATTGCAAATAATGCATGCAAAGAGCAACTAACTTCTGGTTTGTTAAAACTTGATCACAACTTTCCTTCTAAAACATTATCAATGATGGAACCAGAAACACCCTTAGATTGGTGGGGAAACTCTTTCAACGTTCTTAGTCTTGATTTCTTCGAACGAGTTATATCGGTTATGAAATCGAAGGGATTAACACAAGAGTTGATCAGCAAAATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTAGTTCCCTTGACATTGAATTGCAGAAGAAACAAAGGGTCATTGTTGAAACTATAGTTCGCTTACTACCAACTCAATCTAGGAAAAGCTCAGTTCCAATAGCATTTCTTTCATGTTTATTGAAAACTGCAATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATTTGGAGAGGCGGATCGGTTTACAACTCGATCAGGCAATTCTTGAAGACATACTTATTCCAACGAATTCACCTTCGAGTGCTCACAACACAATGTATGATATAGATTCAATTTTGAGGATCTTTTCTACTTTTCTGAATTTGGACGAGGTGGATGATGAAGACAGTGACTTCAGAGATGAAAATCAAATGATGTATGAGTATGAATTTGACAGTCCTGGATCTCCAAAGCAAAGCTCAATTCTTAAGGTATCCAAATTACTTGACAATTTTCTCGCTGAAGTAGCACTAGACTCAAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAACTACTTCCGGATCATGCTCGCGTTACAAGCGACGGACTCTATCGAGCTGTTGACATCTTCCTTAAGGTTAGAACTCAAAATCGAGTTCCTTCTATTGAAAACACTATTAAGAATTTCATTACTCTTCTGTTTTATAAAAATGATTTACACATACGTTTATTTATAGCCCATAACGTTAGAAAATAATATTATGACACAACAAGAGAGTAAAATATGATTGTAAGTCTGTGTAAGAATTTTGACAGTGTGATTGCATTATTGCATACTCATTAAACTCTTAACTAAGTGCCTTGCTGCCGCGACACACTGATTCAACTCTTGTTGCTTTGATTTGTAAAGAAAGGAAAATATTAATTAATGACTGAAATTGTTGGTTTATTTATCATATAGGTTCATCCGAACATTAAGGACTCGGAGCGATACCGCCTAAGCAAAACAATTGATTGTCAGAAACTATCTCAAGAAGCATGCAGCCATGCCGCACAAAATGAAAGGCTACCAGTTCAAATAGGTGTACAAGTTCTTTACTACGAACAAATAAGGCTTCGAAATGCGATGAATGGAGGACACAATCAAATCTTGTTTGGTGGTATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCGGTAAGAAGAGAGAATCGAGAGCTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAGCTTGTGAAGACACATCCTGCACGCAAATTCTTCAAATCATTTGCTCAAAAATTAAGAAAGTTCAATGCTCTATTCCGTATTAACAGTATTCGTGGCAGTGGAACTGGAAGGTCTAGTCCACAACCACGGTCCCGGTTTCCTTTTCAAAAGAGAAGGTGCCACTCAGTTTCATGA
Protein sequence

>MS.gene23003.t1

MGVVTLGELKPSVSGRRTFRPSSSIRHATEWPISDVSSDLTIQVGASTYSLHKFPLVSRSGRFRKLLSESKDSKVPRVSLPTVPGGVDAFEIAAKFCYGINVEFTLSNIAMLYCISHFLEMTEEFSEKNLVTRAESYLKETVLPNTSNIIQVLHHCENLVPLSEDINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTLSMMEPETPLDWWGNSFNVLSLDFFERVISVMKSKGLTQELISKILVNYAHNSLQGTSSVSSLDIELQKKQRVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNSPSSAHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQILFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPARKFFKSFAQKLRKFNALFRINSIRGSGTGRSSPQPRSRFPFQKRRCHSVS