Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23006.t1 | AES82091.2 | 96 | 278 | 11 | 0 | 1 | 278 | 39 | 316 | 2.60E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23006.t1 | Q8N6M0 | 34.9 | 261 | 148 | 6 | 14 | 273 | 42 | 281 | 2.4e-33 | 144.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23006.t1 | G7KRS0 | 96.0 | 278 | 11 | 0 | 1 | 278 | 39 | 316 | 1.9e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene23006 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene050438 | MS.gene23006 | 0.820137 | 8.04E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene23006 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene23006 | 0.800983 | 1.12E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene23006 | 0.803157 | 3.99E-49 | -1.69E-46 |
| MS.gene050815 | MS.gene23006 | 0.815061 | 1.12E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene23006 | 0.829384 | 5.31E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene23006 | 0.833743 | 4.48E-56 | -1.69E-46 |
| MS.gene052020 | MS.gene23006 | 0.811312 | 7.46E-51 | -1.69E-46 |
| MS.gene052611 | MS.gene23006 | 0.824918 | 6.22E-54 | -1.69E-46 |
| MS.gene052612 | MS.gene23006 | 0.801685 | 8.01E-49 | -1.69E-46 |
| MS.gene052613 | MS.gene23006 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene23006 | 0.820403 | 6.99E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene23006 | 0.810831 | 9.48E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene23006 | 0.815784 | 7.74E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene23006 | 0.803249 | 3.81E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene23006 | 0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene23006 | 0.800196 | 1.61E-48 | -1.69E-46 |
| MS.gene056542 | MS.gene23006 | 0.804368 | 2.23E-49 | -1.69E-46 |
| MS.gene056543 | MS.gene23006 | 0.806848 | 6.74E-50 | -1.69E-46 |
| MS.gene056545 | MS.gene23006 | 0.807544 | 4.80E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene23006 | 0.808106 | 3.64E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene23006 | 0.815753 | 7.87E-52 | -1.69E-46 |
| MS.gene059151 | MS.gene23006 | 0.83351 | 5.12E-56 | -1.69E-46 |
| MS.gene059842 | MS.gene23006 | 0.806082 | 9.78E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene23006 | 0.854473 | 1.20E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23006.t1 | MTR_4g104580 | 98.561 | 278 | 4 | 0 | 1 | 278 | 49 | 326 | 0.0 | 571 |
| MS.gene23006.t1 | MTR_7g108240 | 98.561 | 278 | 4 | 0 | 1 | 278 | 39 | 316 | 0.0 | 567 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23006.t1 | AT3G62940 | 65.169 | 267 | 76 | 4 | 20 | 276 | 52 | 311 | 2.39e-121 | 349 |
| MS.gene23006.t1 | AT3G62940 | 65.169 | 267 | 76 | 4 | 20 | 276 | 52 | 311 | 2.39e-121 | 349 |
| MS.gene23006.t1 | AT3G62940 | 65.169 | 267 | 76 | 4 | 20 | 276 | 68 | 327 | 3.45e-121 | 350 |
| MS.gene23006.t1 | AT3G62940 | 65.169 | 267 | 76 | 4 | 20 | 276 | 68 | 327 | 3.45e-121 | 350 |
| MS.gene23006.t1 | AT3G62940 | 65.169 | 267 | 76 | 4 | 20 | 276 | 68 | 327 | 3.45e-121 | 350 |
| MS.gene23006.t1 | AT5G67170 | 30.128 | 156 | 81 | 6 | 118 | 273 | 31 | 158 | 3.34e-12 | 66.2 |
| MS.gene23006.t1 | AT5G67170 | 30.128 | 156 | 81 | 6 | 118 | 273 | 31 | 158 | 3.34e-12 | 66.2 |
Find 66 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACCATATGCATGCTTT+TGG | 0.248740 | 7.2:-6729197 | MS.gene23006:CDS |
| ATCAGTTGGCCCACCTCTTT+GGG | 0.250180 | 7.2:-6729544 | MS.gene23006:CDS |
| AAATTCTCTGACAAACAAAA+TGG | 0.255126 | 7.2:+6729443 | None:intergenic |
| AATCAGTTGGCCCACCTCTT+TGG | 0.262527 | 7.2:-6729545 | MS.gene23006:CDS |
| CGAAGTTGTTGGTATGTATA+TGG | 0.265726 | 7.2:+6729512 | None:intergenic |
| TTGTCCCATTTGATCATATT+GGG | 0.296913 | 7.2:+6729141 | None:intergenic |
| AAAGAGCAATATGGACAATT+TGG | 0.304162 | 7.2:-6729816 | MS.gene23006:CDS |
| TTTGTCCCATTTGATCATAT+TGG | 0.311395 | 7.2:+6729140 | None:intergenic |
| AAGTAGAATCCACAGCAATA+TGG | 0.313389 | 7.2:-6729364 | MS.gene23006:CDS |
| GCCTAAAGCAGACAGTTCTT+TGG | 0.342046 | 7.2:+6729862 | None:intergenic |
| CCATTTGATCATATTGGGAT+TGG | 0.377862 | 7.2:+6729146 | None:intergenic |
| TTGCTGACCTTTGTATTCTC+AGG | 0.380081 | 7.2:+6729758 | None:intergenic |
| ATATCATAATATGCTTCTTC+AGG | 0.382290 | 7.2:+6729306 | None:intergenic |
| CTGTAAAGGCAGTGCCCATC+AGG | 0.392181 | 7.2:+6729578 | None:intergenic |
| CTGCCATTTCTCGAAGTTGT+TGG | 0.400794 | 7.2:+6729501 | None:intergenic |
| TCCTTCCCCATCTCCACATC+AGG | 0.403765 | 7.2:+6729269 | None:intergenic |
| AGTAGAATCCACAGCAATAT+GGG | 0.405492 | 7.2:-6729363 | MS.gene23006:CDS |
| CATTTGATCATATTGGGATT+GGG | 0.415085 | 7.2:+6729147 | None:intergenic |
| TAATGTCATTCTGCTCTGCT+TGG | 0.417976 | 7.2:+6729678 | None:intergenic |
| GTCCTTCCCTGATGTGGAGA+TGG | 0.419141 | 7.2:-6729276 | MS.gene23006:CDS |
| GCCAAAGAACTGTCTGCTTT+AGG | 0.437434 | 7.2:-6729863 | MS.gene23006:CDS |
| CGGAAATGAAAAGAGCAATA+TGG | 0.438701 | 7.2:-6729825 | MS.gene23006:CDS |
| ATACCAACAACTTCGAGAAA+TGG | 0.439245 | 7.2:-6729504 | MS.gene23006:CDS |
| TCCTTCCCTGATGTGGAGAT+GGG | 0.451922 | 7.2:-6729275 | MS.gene23006:CDS |
| GAAAGGAAGTTGAAGCCTCT+TGG | 0.456629 | 7.2:-6729623 | MS.gene23006:CDS |
| GCTGATGGTATTGGTTCGTC+TGG | 0.457026 | 7.2:-6729236 | MS.gene23006:CDS |
| TATAAATCAGCTGATGGTAT+TGG | 0.465751 | 7.2:-6729245 | MS.gene23006:CDS |
| TGCTAAGCTCAAGGAGAAGC+AGG | 0.474324 | 7.2:-6729885 | MS.gene23006:CDS |
| TTCAGGGTCCTTCCCTGATG+TGG | 0.478905 | 7.2:-6729282 | MS.gene23006:CDS |
| AATTCTCTGACAAACAAAAT+GGG | 0.488222 | 7.2:+6729444 | None:intergenic |
| ATGGTAAGAAAGCATGATAC+TGG | 0.496674 | 7.2:+6729211 | None:intergenic |
| AATTTGGTGAAGGCCATAGC+TGG | 0.500352 | 7.2:-6729800 | MS.gene23006:CDS |
| CAAGCCCAAAAGCATGCATA+TGG | 0.502108 | 7.2:+6729192 | None:intergenic |
| TTGTCAGAGAATTTGATTGA+AGG | 0.523344 | 7.2:-6729434 | MS.gene23006:CDS |
| GATTCTCAACAGCTCTGTAA+AGG | 0.528906 | 7.2:+6729564 | None:intergenic |
| ACAAGCAGCTAGAGGTAGCA+AGG | 0.534438 | 7.2:-6729960 | MS.gene23006:CDS |
| TTGTCCTCCCCATATTGCTG+TGG | 0.559595 | 7.2:+6729355 | None:intergenic |
| TGGTGAGCATTATAATTCTG+TGG | 0.561039 | 7.2:-6729171 | MS.gene23006:CDS |
| CAGAGCTGTTGAGAATCAGT+TGG | 0.563261 | 7.2:-6729558 | MS.gene23006:CDS |
| TTAGGCTATAGCAGTGGTAA+CGG | 0.571066 | 7.2:-6729845 | MS.gene23006:CDS |
| CCCCATCTCCACATCAGGGA+AGG | 0.576306 | 7.2:+6729274 | None:intergenic |
| TGGGGAGGACAACTAGAGCT+TGG | 0.581684 | 7.2:-6729344 | MS.gene23006:CDS |
| ACTAACAGATACTCCAGCTA+TGG | 0.583680 | 7.2:+6729787 | None:intergenic |
| CCTTCCCTGATGTGGAGATG+GGG | 0.586628 | 7.2:-6729274 | MS.gene23006:CDS |
| CTTCTTCAGGCAGTGAGTCA+AGG | 0.591792 | 7.2:+6729319 | None:intergenic |
| TCAACTCTCTGCTAAGCTCA+AGG | 0.597792 | 7.2:-6729894 | MS.gene23006:CDS |
| CCCTGATGTGGAGATGGGGA+AGG | 0.605910 | 7.2:-6729270 | MS.gene23006:CDS |
| CAGTTGGCCCACCTCTTTGG+GGG | 0.609264 | 7.2:-6729542 | MS.gene23006:CDS |
| AAGGAGTATAAATCAGCTGA+TGG | 0.610891 | 7.2:-6729251 | MS.gene23006:CDS |
| TGACATTATAAGTGATCGCA+CGG | 0.613584 | 7.2:-6729663 | MS.gene23006:CDS |
| TTGAAAATGAGAAACTCGAA+AGG | 0.613680 | 7.2:-6729640 | MS.gene23006:CDS |
| GTATGTGAAATAAAGCCTGA+TGG | 0.628060 | 7.2:-6729593 | MS.gene23006:CDS |
| CAATATGGACAATTTGGTGA+AGG | 0.628539 | 7.2:-6729810 | MS.gene23006:CDS |
| TGAGAATACAAAGGTCAGCA+AGG | 0.636690 | 7.2:-6729756 | MS.gene23006:CDS |
| AAATGGCAGCTGCTTACATG+AGG | 0.636892 | 7.2:-6729487 | MS.gene23006:CDS |
| TCACATACAGTCAAACCAAG+AGG | 0.643986 | 7.2:+6729608 | None:intergenic |
| GAATCCACAGCAATATGGGG+AGG | 0.646499 | 7.2:-6729359 | MS.gene23006:CDS |
| CCTTCCCCATCTCCACATCA+GGG | 0.653564 | 7.2:+6729270 | None:intergenic |
| TATGTGAAATAAAGCCTGAT+GGG | 0.653902 | 7.2:-6729592 | MS.gene23006:CDS |
| TCAGTTGGCCCACCTCTTTG+GGG | 0.655302 | 7.2:-6729543 | MS.gene23006:CDS |
| TCTCTGACAAACAAAATGGG+AGG | 0.660756 | 7.2:+6729447 | None:intergenic |
| GTAGAATCCACAGCAATATG+GGG | 0.661003 | 7.2:-6729362 | MS.gene23006:CDS |
| TTACATGAGGAAGCATACAT+CGG | 0.677679 | 7.2:-6729474 | MS.gene23006:CDS |
| TAGTCAACCTGAGAATACAA+AGG | 0.678538 | 7.2:-6729765 | MS.gene23006:CDS |
| AGGTCAGCAAGGCCAAACAG+AGG | 0.705842 | 7.2:-6729745 | MS.gene23006:CDS |
| TCTGCTTTAGGCTATAGCAG+TGG | 0.730219 | 7.2:-6729851 | MS.gene23006:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGCATATTATGATATTTTC+AGG | - | chr7.2:6729823-6729842 | MS.gene23006:CDS | 20.0% |
| !!! | AGCATATTATGATATTTTCA+GGG | - | chr7.2:6729824-6729843 | MS.gene23006:CDS | 20.0% |
| ! | AAATTCTCTGACAAACAAAA+TGG | + | chr7.2:6729682-6729701 | None:intergenic | 25.0% |
| ! | AATTCTCTGACAAACAAAAT+GGG | + | chr7.2:6729681-6729700 | None:intergenic | 25.0% |
| ! | ATATCATAATATGCTTCTTC+AGG | + | chr7.2:6729819-6729838 | None:intergenic | 25.0% |
| AAAAGCTAAGAAAAAGCAAG+TGG | - | chr7.2:6729192-6729211 | MS.gene23006:CDS | 30.0% | |
| AAAGAGCAATATGGACAATT+TGG | - | chr7.2:6729306-6729325 | MS.gene23006:CDS | 30.0% | |
| TATAAATCAGCTGATGGTAT+TGG | - | chr7.2:6729877-6729896 | MS.gene23006:CDS | 30.0% | |
| TATGTGAAATAAAGCCTGAT+GGG | - | chr7.2:6729530-6729549 | MS.gene23006:CDS | 30.0% | |
| TTGAAAATGAGAAACTCGAA+AGG | - | chr7.2:6729482-6729501 | MS.gene23006:CDS | 30.0% | |
| TTGTCAGAGAATTTGATTGA+AGG | - | chr7.2:6729688-6729707 | MS.gene23006:CDS | 30.0% | |
| AAGTAGAATCCACAGCAATA+TGG | - | chr7.2:6729758-6729777 | MS.gene23006:CDS | 35.0% | |
| AGTAGAATCCACAGCAATAT+GGG | - | chr7.2:6729759-6729778 | MS.gene23006:CDS | 35.0% | |
| ATACCAACAACTTCGAGAAA+TGG | - | chr7.2:6729618-6729637 | MS.gene23006:CDS | 35.0% | |
| ATGAAAAAACAAGCAGCTAG+AGG | - | chr7.2:6729154-6729173 | MS.gene23006:CDS | 35.0% | |
| CGAAGTTGTTGGTATGTATA+TGG | + | chr7.2:6729613-6729632 | None:intergenic | 35.0% | |
| CGGAAATGAAAAGAGCAATA+TGG | - | chr7.2:6729297-6729316 | MS.gene23006:CDS | 35.0% | |
| GTATGTGAAATAAAGCCTGA+TGG | - | chr7.2:6729529-6729548 | MS.gene23006:CDS | 35.0% | |
| TAGTCAACCTGAGAATACAA+AGG | - | chr7.2:6729357-6729376 | MS.gene23006:CDS | 35.0% | |
| TGACATTATAAGTGATCGCA+CGG | - | chr7.2:6729459-6729478 | MS.gene23006:CDS | 35.0% | |
| TGGTGAGCATTATAATTCTG+TGG | - | chr7.2:6729951-6729970 | MS.gene23006:CDS | 35.0% | |
| ! | AAGGAGTATAAATCAGCTGA+TGG | - | chr7.2:6729871-6729890 | MS.gene23006:CDS | 35.0% |
| ! | ATGGTAAGAAAGCATGATAC+TGG | + | chr7.2:6729914-6729933 | None:intergenic | 35.0% |
| ! | CAATATGGACAATTTGGTGA+AGG | - | chr7.2:6729312-6729331 | MS.gene23006:CDS | 35.0% |
| ! | CTTACCATATGCATGCTTTT+GGG | - | chr7.2:6729926-6729945 | MS.gene23006:CDS | 35.0% |
| ! | TCTTACCATATGCATGCTTT+TGG | - | chr7.2:6729925-6729944 | MS.gene23006:CDS | 35.0% |
| ! | TTACATGAGGAAGCATACAT+CGG | - | chr7.2:6729648-6729667 | MS.gene23006:CDS | 35.0% |
| ACTAACAGATACTCCAGCTA+TGG | + | chr7.2:6729338-6729357 | None:intergenic | 40.0% | |
| AGCTAAGAAAAAGCAAGTGG+AGG | - | chr7.2:6729195-6729214 | MS.gene23006:CDS | 40.0% | |
| GATTCTCAACAGCTCTGTAA+AGG | + | chr7.2:6729561-6729580 | None:intergenic | 40.0% | |
| GTAGAATCCACAGCAATATG+GGG | - | chr7.2:6729760-6729779 | MS.gene23006:CDS | 40.0% | |
| TAATGTCATTCTGCTCTGCT+TGG | + | chr7.2:6729447-6729466 | None:intergenic | 40.0% | |
| TCACATACAGTCAAACCAAG+AGG | + | chr7.2:6729517-6729536 | None:intergenic | 40.0% | |
| TCTCTGACAAACAAAATGGG+AGG | + | chr7.2:6729678-6729697 | None:intergenic | 40.0% | |
| TGAGAATACAAAGGTCAGCA+AGG | - | chr7.2:6729366-6729385 | MS.gene23006:CDS | 40.0% | |
| TTAGGCTATAGCAGTGGTAA+CGG | - | chr7.2:6729277-6729296 | MS.gene23006:CDS | 40.0% | |
| TTGCTGACCTTTGTATTCTC+AGG | + | chr7.2:6729367-6729386 | None:intergenic | 40.0% | |
| AAATGGCAGCTGCTTACATG+AGG | - | chr7.2:6729635-6729654 | MS.gene23006:CDS | 45.0% | |
| CAGAGCTGTTGAGAATCAGT+TGG | - | chr7.2:6729564-6729583 | MS.gene23006:CDS | 45.0% | |
| GAAAAAGCAAGTGGAGGAAG+AGG | - | chr7.2:6729201-6729220 | MS.gene23006:CDS | 45.0% | |
| GAAAGGAAGTTGAAGCCTCT+TGG | - | chr7.2:6729499-6729518 | MS.gene23006:CDS | 45.0% | |
| GCCAAAGAACTGTCTGCTTT+AGG | - | chr7.2:6729259-6729278 | MS.gene23006:CDS | 45.0% | |
| GCCTAAAGCAGACAGTTCTT+TGG | + | chr7.2:6729263-6729282 | None:intergenic | 45.0% | |
| TCAACTCTCTGCTAAGCTCA+AGG | - | chr7.2:6729228-6729247 | MS.gene23006:CDS | 45.0% | |
| ! | AATTTGGTGAAGGCCATAGC+TGG | - | chr7.2:6729322-6729341 | MS.gene23006:CDS | 45.0% |
| ! | AGATTTTCCCCCAAAGAGGT+GGG | + | chr7.2:6729590-6729609 | None:intergenic | 45.0% |
| ! | ATGGAGATTTTCCCCCAAAG+AGG | + | chr7.2:6729594-6729613 | None:intergenic | 45.0% |
| ! | CAAGCCCAAAAGCATGCATA+TGG | + | chr7.2:6729933-6729952 | None:intergenic | 45.0% |
| ! | CATATGCATGCTTTTGGGCT+TGG | - | chr7.2:6729931-6729950 | MS.gene23006:CDS | 45.0% |
| ! | CTGCCATTTCTCGAAGTTGT+TGG | + | chr7.2:6729624-6729643 | None:intergenic | 45.0% |
| ! | TCTGCTTTAGGCTATAGCAG+TGG | - | chr7.2:6729271-6729290 | MS.gene23006:CDS | 45.0% |
| ! | TCTTTTGTCACGCCTCTGTT+TGG | + | chr7.2:6729392-6729411 | None:intergenic | 45.0% |
| AATCAGTTGGCCCACCTCTT+TGG | - | chr7.2:6729577-6729596 | MS.gene23006:CDS | 50.0% | |
| ACAAGCAGCTAGAGGTAGCA+AGG | - | chr7.2:6729162-6729181 | MS.gene23006:CDS | 50.0% | |
| ATCAGTTGGCCCACCTCTTT+GGG | - | chr7.2:6729578-6729597 | MS.gene23006:CDS | 50.0% | |
| CTTCTTCAGGCAGTGAGTCA+AGG | + | chr7.2:6729806-6729825 | None:intergenic | 50.0% | |
| GAATCCACAGCAATATGGGG+AGG | - | chr7.2:6729763-6729782 | MS.gene23006:CDS | 50.0% | |
| TCCTTCCCTGATGTGGAGAT+GGG | - | chr7.2:6729847-6729866 | MS.gene23006:CDS | 50.0% | |
| TGCTAAGCTCAAGGAGAAGC+AGG | - | chr7.2:6729237-6729256 | MS.gene23006:CDS | 50.0% | |
| TTGTCCTCCCCATATTGCTG+TGG | + | chr7.2:6729770-6729789 | None:intergenic | 50.0% | |
| ! | GAGATTTTCCCCCAAAGAGG+TGG | + | chr7.2:6729591-6729610 | None:intergenic | 50.0% |
| !! | GCTGATGGTATTGGTTCGTC+TGG | - | chr7.2:6729886-6729905 | MS.gene23006:CDS | 50.0% |
| AGGTCAGCAAGGCCAAACAG+AGG | - | chr7.2:6729377-6729396 | MS.gene23006:CDS | 55.0% | |
| CCTTCCCCATCTCCACATCA+GGG | + | chr7.2:6729855-6729874 | None:intergenic | 55.0% | |
| CCTTCCCTGATGTGGAGATG+GGG | - | chr7.2:6729848-6729867 | MS.gene23006:CDS | 55.0% | |
| CTGTAAAGGCAGTGCCCATC+AGG | + | chr7.2:6729547-6729566 | None:intergenic | 55.0% | |
| GTCCTTCCCTGATGTGGAGA+TGG | - | chr7.2:6729846-6729865 | MS.gene23006:CDS | 55.0% | |
| TCAGTTGGCCCACCTCTTTG+GGG | - | chr7.2:6729579-6729598 | MS.gene23006:CDS | 55.0% | |
| TCCTTCCCCATCTCCACATC+AGG | + | chr7.2:6729856-6729875 | None:intergenic | 55.0% | |
| TGGGGAGGACAACTAGAGCT+TGG | - | chr7.2:6729778-6729797 | MS.gene23006:CDS | 55.0% | |
| TTCAGGGTCCTTCCCTGATG+TGG | - | chr7.2:6729840-6729859 | MS.gene23006:CDS | 55.0% | |
| CAGTTGGCCCACCTCTTTGG+GGG | - | chr7.2:6729580-6729599 | MS.gene23006:CDS | 60.0% | |
| CCCCATCTCCACATCAGGGA+AGG | + | chr7.2:6729851-6729870 | None:intergenic | 60.0% | |
| CCCTGATGTGGAGATGGGGA+AGG | - | chr7.2:6729852-6729871 | MS.gene23006:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6729154 | 6729990 | 6729154 | ID=MS.gene23006 |
| chr7.2 | mRNA | 6729154 | 6729990 | 6729154 | ID=MS.gene23006.t1;Parent=MS.gene23006 |
| chr7.2 | exon | 6729154 | 6729990 | 6729154 | ID=MS.gene23006.t1.exon1;Parent=MS.gene23006.t1 |
| chr7.2 | CDS | 6729154 | 6729990 | 6729154 | ID=cds.MS.gene23006.t1;Parent=MS.gene23006.t1 |
| Gene Sequence |
| Protein sequence |
