Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23337.t1 | XP_003607031.1 | 97 | 541 | 12 | 3 | 1 | 538 | 1 | 540 | 1.20E-281 | 978.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23337.t1 | Q8W4G3 | 68.5 | 460 | 143 | 2 | 89 | 546 | 98 | 557 | 4.5e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23337.t1 | G7JJS5 | 97.0 | 541 | 12 | 3 | 1 | 538 | 1 | 540 | 8.8e-282 | 978.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene23337 | 0.80056 | 1.36E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene23337 | 0.802811 | 4.70E-49 | -1.69E-46 |
| MS.gene052271 | MS.gene23337 | 0.812378 | 4.37E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene23337 | 0.839713 | 1.34E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene23337 | 0.817466 | 3.25E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene23337 | 0.80423 | 2.39E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene23337 | 0.811719 | 6.08E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene23337 | 0.812932 | 3.30E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene23337 | 0.812829 | 3.48E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene23337 | 0.82181 | 3.31E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene23337 | 0.803067 | 4.16E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene23337 | 0.800607 | 1.33E-48 | -1.69E-46 |
| MS.gene05806 | MS.gene23337 | 0.828515 | 8.61E-55 | -1.69E-46 |
| MS.gene059029 | MS.gene23337 | 0.816833 | 4.51E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene23337 | 0.802068 | 6.69E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene23337 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene23337 | 0.820376 | 7.09E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene23337 | 0.812345 | 4.44E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23337.t1 | MTR_4g071420 | 97.043 | 541 | 12 | 3 | 1 | 538 | 1 | 540 | 0.0 | 1053 |
| MS.gene23337.t1 | MTR_4g071465 | 82.299 | 548 | 90 | 5 | 1 | 547 | 1 | 542 | 0.0 | 890 |
| MS.gene23337.t1 | MTR_4g071445 | 80.182 | 550 | 103 | 5 | 1 | 547 | 1 | 547 | 0.0 | 874 |
| MS.gene23337.t1 | MTR_4g071420 | 96.798 | 406 | 9 | 3 | 1 | 403 | 1 | 405 | 0.0 | 791 |
| MS.gene23337.t1 | MTR_4g071370 | 68.382 | 544 | 154 | 5 | 11 | 547 | 17 | 549 | 0.0 | 736 |
| MS.gene23337.t1 | MTR_4g071390 | 68.097 | 536 | 158 | 5 | 1 | 536 | 1 | 523 | 0.0 | 717 |
| MS.gene23337.t1 | MTR_4g071370 | 67.094 | 468 | 137 | 4 | 11 | 472 | 17 | 473 | 0.0 | 624 |
| MS.gene23337.t1 | MTR_4g071370 | 67.043 | 443 | 129 | 4 | 11 | 447 | 17 | 448 | 0.0 | 587 |
| MS.gene23337.t1 | MTR_5g099020 | 24.750 | 501 | 321 | 14 | 63 | 531 | 67 | 543 | 4.44e-20 | 94.7 |
| MS.gene23337.t1 | MTR_5g099020 | 24.750 | 501 | 321 | 14 | 63 | 531 | 67 | 543 | 5.78e-20 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23337.t1 | AT2G21340 | 61.027 | 526 | 192 | 3 | 22 | 546 | 44 | 557 | 0.0 | 654 |
| MS.gene23337.t1 | AT2G21340 | 60.646 | 526 | 191 | 4 | 22 | 546 | 44 | 554 | 0.0 | 646 |
| MS.gene23337.t1 | AT4G39030 | 66.667 | 444 | 147 | 1 | 97 | 539 | 90 | 533 | 0.0 | 603 |
| MS.gene23337.t1 | AT2G38330 | 25.587 | 426 | 287 | 10 | 124 | 531 | 95 | 508 | 3.26e-17 | 85.5 |
| MS.gene23337.t1 | AT3G08040 | 24.654 | 361 | 257 | 10 | 176 | 531 | 162 | 512 | 1.74e-13 | 73.9 |
| MS.gene23337.t1 | AT3G08040 | 24.654 | 361 | 257 | 10 | 176 | 531 | 58 | 408 | 2.01e-13 | 73.2 |
| MS.gene23337.t1 | AT4G38380 | 22.736 | 541 | 372 | 13 | 14 | 527 | 12 | 533 | 8.71e-12 | 68.6 |
| MS.gene23337.t1 | AT4G38380 | 22.909 | 550 | 370 | 14 | 14 | 527 | 12 | 543 | 2.54e-11 | 67.0 |
| MS.gene23337.t1 | AT4G38380 | 22.909 | 550 | 370 | 14 | 14 | 527 | 12 | 543 | 2.54e-11 | 67.0 |
| MS.gene23337.t1 | AT1G51340 | 21.674 | 466 | 299 | 10 | 124 | 531 | 51 | 508 | 7.46e-11 | 65.5 |
| MS.gene23337.t1 | AT1G51340 | 21.674 | 466 | 299 | 10 | 124 | 531 | 51 | 508 | 7.46e-11 | 65.5 |
| MS.gene23337.t1 | AT1G51340 | 21.674 | 466 | 299 | 10 | 124 | 531 | 51 | 508 | 7.46e-11 | 65.5 |
Find 156 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGGATTGCTGGGGCTGCT+TGG | 0.217868 | 4.4:-37291159 | MS.gene23337:CDS |
| CTGGACCTGCTATTGGTCTT+TGG | 0.222999 | 4.4:-37293671 | MS.gene23337:CDS |
| CTACTGTTCACAATGTTATT+TGG | 0.227670 | 4.4:-37292345 | MS.gene23337:CDS |
| TGGGATTGCTGGGGCTGCTT+GGG | 0.250299 | 4.4:-37291158 | MS.gene23337:CDS |
| ATTTGTCTCATTGGTGTTAA+AGG | 0.256466 | 4.4:-37290726 | MS.gene23337:intron |
| TCAATTGAACTTGCTGCTTT+AGG | 0.260915 | 4.4:-37293594 | MS.gene23337:intron |
| ATCATTCTGTGCAGATATTT+AGG | 0.264256 | 4.4:-37291184 | MS.gene23337:CDS |
| GCTGTTGCTAGTATTATAAA+TGG | 0.276859 | 4.4:-37291217 | MS.gene23337:CDS |
| GTCGATTGCTACGTCGAATA+TGG | 0.279146 | 4.4:-37293425 | MS.gene23337:CDS |
| AAACCTCGCTGATTTGTTCT+TGG | 0.286580 | 4.4:+37293778 | None:intergenic |
| TTCAAGTGCTCTTGTACTAT+TGG | 0.286743 | 4.4:-37288880 | MS.gene23337:intron |
| TGCTCCTGTATTTGTCTCAT+TGG | 0.309006 | 4.4:-37290735 | MS.gene23337:CDS |
| GCTTTGATTAAGCTAGAAAA+TGG | 0.309053 | 4.4:+37287505 | None:intergenic |
| GCATGGCCTTCTTTACTTGT+TGG | 0.314006 | 4.4:-37291818 | MS.gene23337:CDS |
| GGTGCCTGTGTTGGTATTGA+TGG | 0.318994 | 4.4:+37287443 | None:intergenic |
| TAGCAACAGCCAAAGCCTTC+AGG | 0.320978 | 4.4:+37291230 | None:intergenic |
| TTGGGGACCCCTGAAGGCTT+TGG | 0.326543 | 4.4:-37291239 | MS.gene23337:CDS |
| TACTTGTTGAACAGAGTATA+TGG | 0.327392 | 4.4:-37293722 | MS.gene23337:CDS |
| TGCTACTGCACTTGCTAAAC+AGG | 0.330445 | 4.4:-37293401 | MS.gene23337:intron |
| CTCATTGATACTGCTGTTGT+TGG | 0.336581 | 4.4:-37293627 | MS.gene23337:CDS |
| TTTCCCTTGTTGGATTTCAA+TGG | 0.339549 | 4.4:-37288739 | MS.gene23337:CDS |
| CCCTCCAGGCCGATAGTTGC+AGG | 0.339778 | 4.4:+37289761 | None:intergenic |
| AAGGAAATAGTATTGTTTAC+TGG | 0.339822 | 4.4:-37293690 | MS.gene23337:CDS |
| CATAAATGATTGAGCAGTTT+GGG | 0.341891 | 4.4:+37290395 | None:intergenic |
| GATTGAGCAGTTTGGGAGAT+AGG | 0.343850 | 4.4:+37290402 | None:intergenic |
| GCCTTCTTTACTTGTTGGAT+TGG | 0.344744 | 4.4:-37291813 | MS.gene23337:CDS |
| GCATAAATGATTGAGCAGTT+TGG | 0.352223 | 4.4:+37290394 | None:intergenic |
| TTGTTTACTGGACCTGCTAT+TGG | 0.364742 | 4.4:-37293678 | MS.gene23337:CDS |
| TATTTAGGCTATGGGATTGC+TGG | 0.365085 | 4.4:-37291169 | MS.gene23337:CDS |
| GGCTTCGGGTGGTGGCTAGC+TGG | 0.365335 | 4.4:+37287464 | None:intergenic |
| GTGTGAAGAAGCTTCACTTT+TGG | 0.378371 | 4.4:+37287336 | None:intergenic |
| CATCTTTGCAATACAATCAT+TGG | 0.380014 | 4.4:-37287314 | MS.gene23337:CDS |
| TTAACTATTGGAGCTATACT+TGG | 0.389308 | 4.4:-37290073 | MS.gene23337:CDS |
| CGGCCTGGAGGGAACATTGC+TGG | 0.389943 | 4.4:-37289750 | MS.gene23337:intron |
| TTTGAAGTACGCGAGGTGTT+AGG | 0.390174 | 4.4:+37293829 | None:intergenic |
| TTCCCTTGTTGGATTTCAAT+GGG | 0.393428 | 4.4:-37288738 | MS.gene23337:intron |
| TCGAGCCGGAACCGTCGCTT+CGG | 0.394110 | 4.4:-37293855 | MS.gene23337:CDS |
| GCTATTGGTCTTTGGTTATG+TGG | 0.403668 | 4.4:-37293663 | MS.gene23337:CDS |
| TGGGGCTGCTTGGGCTACAT+TGG | 0.406685 | 4.4:-37291149 | MS.gene23337:CDS |
| CGAGCCGGAACCGTCGCTTC+GGG | 0.407801 | 4.4:-37293854 | MS.gene23337:CDS |
| TCTTGGTATGAAAGACTCTT+GGG | 0.418828 | 4.4:-37291257 | MS.gene23337:CDS |
| TGTGTTGGTATTGATGGCTT+CGG | 0.421062 | 4.4:+37287449 | None:intergenic |
| CTGTGCAGATATTTAGGCTA+TGG | 0.424595 | 4.4:-37291178 | MS.gene23337:CDS |
| GTGTTGGTATTGATGGCTTC+GGG | 0.427588 | 4.4:+37287450 | None:intergenic |
| GTCTTGGTATGAAAGACTCT+TGG | 0.428478 | 4.4:-37291258 | MS.gene23337:CDS |
| GTATTGATGGCTTCGGGTGG+TGG | 0.431114 | 4.4:+37287456 | None:intergenic |
| GAGGTAAGCGGCGGTTTGAA+TGG | 0.431197 | 4.4:+37293940 | None:intergenic |
| GCTAGTATTATAAATGGAAT+TGG | 0.434795 | 4.4:-37291211 | MS.gene23337:CDS |
| TGTAATAATGCGTTGGTTTG+TGG | 0.437933 | 4.4:+37293881 | None:intergenic |
| CAGATCTTACGAAGCAGATA+TGG | 0.438064 | 4.4:-37288779 | MS.gene23337:CDS |
| GACAGGCTAGGTCGCTTCTA+AGG | 0.443810 | 4.4:-37290102 | MS.gene23337:intron |
| CTTCTCCATTCCTTCGGGGA+AGG | 0.446414 | 4.4:-37290783 | MS.gene23337:CDS |
| ACCTGATCAGATGGTCATCC+AGG | 0.449016 | 4.4:-37289993 | MS.gene23337:CDS |
| GTACGGAGTAAATCGGAGTT+TGG | 0.455255 | 4.4:-37290361 | MS.gene23337:CDS |
| AAATACCACTGGGAGATAGA+AGG | 0.457479 | 4.4:+37288607 | None:intergenic |
| GGAACCCGAAGCGACGGTTC+CGG | 0.458074 | 4.4:+37293850 | None:intergenic |
| TTGGTGTTAGATTCGAGGAT+TGG | 0.460274 | 4.4:-37291840 | MS.gene23337:intron |
| TCCTGGATGACCATCTGATC+AGG | 0.465745 | 4.4:+37289992 | None:intergenic |
| TAGTTGGAACATTTGTTCCT+TGG | 0.471829 | 4.4:-37290036 | MS.gene23337:CDS |
| ATCCCTTCTCGATTAGAGTC+TGG | 0.471857 | 4.4:+37290819 | None:intergenic |
| GTTTGTGGAATGGATGGTGG+TGG | 0.477193 | 4.4:+37293896 | None:intergenic |
| TTTGGAGCTGGGAAGAGAAA+GGG | 0.478472 | 4.4:+37287354 | None:intergenic |
| TGTGCAGATATTTAGGCTAT+GGG | 0.478585 | 4.4:-37291177 | MS.gene23337:CDS |
| GTGGCTAGCTGGCGGCGAGT+AGG | 0.478882 | 4.4:+37287475 | None:intergenic |
| AGCAACAGCCAAAGCCTTCA+GGG | 0.480715 | 4.4:+37291231 | None:intergenic |
| GAAAGTTGATGACTGAACTC+TGG | 0.481974 | 4.4:+37287418 | None:intergenic |
| TTCTGAGTATAAAATACCAC+TGG | 0.488881 | 4.4:+37288596 | None:intergenic |
| TGATCAGGTGTAAATGTGTA+GGG | 0.493363 | 4.4:+37290007 | None:intergenic |
| AGTTGATGTACGGAGTAAAT+CGG | 0.494109 | 4.4:-37290368 | MS.gene23337:CDS |
| TGGTGGTGGTGTTGTTGAGA+AGG | 0.500729 | 4.4:+37293910 | None:intergenic |
| ACTCTGGGTGGTGCCTGTGT+TGG | 0.503916 | 4.4:+37287434 | None:intergenic |
| GACACCTGCAACTATCGGCC+TGG | 0.506576 | 4.4:-37289765 | MS.gene23337:CDS |
| AGGTAAGCGGCGGTTTGAAT+GGG | 0.507496 | 4.4:+37293941 | None:intergenic |
| ATTTAGGCTATGGGATTGCT+GGG | 0.507725 | 4.4:-37291168 | MS.gene23337:CDS |
| CTTGAATTAGTCCAAGGTGA+TGG | 0.508769 | 4.4:+37287264 | None:intergenic |
| TAATGCGTTGGTTTGTGGAA+TGG | 0.514924 | 4.4:+37293886 | None:intergenic |
| CATTGGATTAGTATGTGGCT+TGG | 0.515356 | 4.4:-37292373 | MS.gene23337:CDS |
| ACCAATCCAACAAGTAAAGA+AGG | 0.516299 | 4.4:+37291812 | None:intergenic |
| AACACCAATGAGACAAATAC+AGG | 0.516398 | 4.4:+37290731 | None:intergenic |
| AGACTCTTGGGGACCCCTGA+AGG | 0.519624 | 4.4:-37291245 | MS.gene23337:CDS |
| GGTGGTGGTGTTGTTGAGAA+GGG | 0.519739 | 4.4:+37293911 | None:intergenic |
| GGACAAGCATAGCAGTCATA+AGG | 0.520773 | 4.4:+37287286 | None:intergenic |
| CACATTTACACCTGATCAGA+TGG | 0.521609 | 4.4:-37290002 | MS.gene23337:CDS |
| AAATTCCTTCCCCGAAGGAA+TGG | 0.521817 | 4.4:+37290778 | None:intergenic |
| GAGTATATGGATTCAGATGA+AGG | 0.524134 | 4.4:-37293709 | MS.gene23337:CDS |
| TGCAGCTAATACTTATGTCC+AGG | 0.527820 | 4.4:-37292147 | MS.gene23337:intron |
| TTTATAAGTTTGTCAACGAG+TGG | 0.530943 | 4.4:-37288912 | MS.gene23337:CDS |
| TGGGAGATAGAAGGCGCAGA+AGG | 0.531589 | 4.4:+37288616 | None:intergenic |
| GGTACTAAATGTACATTTGT+CGG | 0.536146 | 4.4:+37292170 | None:intergenic |
| TTGAATTAGTCCAAGGTGAT+GGG | 0.537533 | 4.4:+37287265 | None:intergenic |
| CTATGCTTGTCCCATCACCT+TGG | 0.537842 | 4.4:-37287275 | MS.gene23337:CDS |
| TTGGTTTGTGGAATGGATGG+TGG | 0.538761 | 4.4:+37293893 | None:intergenic |
| CTGATCAGGTGTAAATGTGT+AGG | 0.543118 | 4.4:+37290006 | None:intergenic |
| TAACTATTGGAGCTATACTT+GGG | 0.544847 | 4.4:-37290072 | MS.gene23337:CDS |
| TTTATGCCTGAGTTGATGTA+CGG | 0.549209 | 4.4:-37290378 | MS.gene23337:CDS |
| GATTGGTTGCTCAGAGTGCA+AGG | 0.549245 | 4.4:-37291796 | MS.gene23337:intron |
| AGTAAATCGGAGTTTGGTAA+AGG | 0.549929 | 4.4:-37290355 | MS.gene23337:intron |
| TTTACGTTGTGCACAGTATG+TGG | 0.550044 | 4.4:-37290429 | MS.gene23337:CDS |
| TTGAATGGGAAATGAGGTTG+CGG | 0.557483 | 4.4:+37293955 | None:intergenic |
| GCGTTGGTTTGTGGAATGGA+TGG | 0.560812 | 4.4:+37293890 | None:intergenic |
| ATCAATGGGTACACATGCAA+CGG | 0.561868 | 4.4:-37290584 | MS.gene23337:CDS |
| GGCGGTTTGAATGGGAAATG+AGG | 0.564980 | 4.4:+37293949 | None:intergenic |
| ATACCAGCAATGTTCCCTCC+AGG | 0.568305 | 4.4:+37289747 | None:intergenic |
| TATGTTTGTGTAGGATAGGG+AGG | 0.568560 | 4.4:-37292427 | MS.gene23337:intron |
| GAAGCGACGGTTCCGGCTCG+AGG | 0.572994 | 4.4:+37293857 | None:intergenic |
| TTTGGTGCGACAACGCTCGC+AGG | 0.573276 | 4.4:-37292327 | MS.gene23337:intron |
| AAAGTTGATGACTGAACTCT+GGG | 0.573609 | 4.4:+37287419 | None:intergenic |
| GAGCCAGACTCTAATCGAGA+AGG | 0.575815 | 4.4:-37290822 | MS.gene23337:CDS |
| GATATGGTCTGCAAGGCTGT+TGG | 0.575901 | 4.4:-37288763 | MS.gene23337:CDS |
| CGAAGCAGATATGGTCTGCA+AGG | 0.576131 | 4.4:-37288770 | MS.gene23337:CDS |
| TCGAGGATGTAATAATGCGT+TGG | 0.580401 | 4.4:+37293874 | None:intergenic |
| TTGGAGCTGGGAAGAGAAAG+GGG | 0.583777 | 4.4:+37287355 | None:intergenic |
| TATACTCAGAAGATGTAAGC+CGG | 0.586052 | 4.4:-37288584 | MS.gene23337:intron |
| GTTAGATTCGAGGATTGGCA+TGG | 0.588204 | 4.4:-37291835 | MS.gene23337:intron |
| TCTAATCGAGAAGGGATACA+AGG | 0.589386 | 4.4:-37290813 | MS.gene23337:CDS |
| TGATTAAGCTAGAAAATGGA+AGG | 0.590342 | 4.4:+37287509 | None:intergenic |
| CCTGCAACTATCGGCCTGGA+GGG | 0.591317 | 4.4:-37289761 | MS.gene23337:CDS |
| GAATATCTTGAATTAGTCCA+AGG | 0.591887 | 4.4:+37287258 | None:intergenic |
| TGGACATAAGTATTAGCTGC+AGG | 0.592382 | 4.4:+37292149 | None:intergenic |
| GACAGAAATTCCTTCCCCGA+AGG | 0.593713 | 4.4:+37290773 | None:intergenic |
| AGCCAGACTCTAATCGAGAA+GGG | 0.596541 | 4.4:-37290821 | MS.gene23337:CDS |
| GTGTGATCATGCAGATGCAT+AGG | 0.607243 | 4.4:-37289820 | MS.gene23337:intron |
| GATTGAAATGCAGTGAGAGT+TGG | 0.613518 | 4.4:+37294000 | None:intergenic |
| GATACTGCTGTTGTTGGTCA+AGG | 0.613645 | 4.4:-37293621 | MS.gene23337:CDS |
| TTCGGGTGGTGGCTAGCTGG+CGG | 0.616892 | 4.4:+37287467 | None:intergenic |
| GTGTTAGGAACCCGAAGCGA+CGG | 0.617326 | 4.4:+37293844 | None:intergenic |
| ACAAGAACAAGAAGAAGTGA+AGG | 0.617515 | 4.4:-37293748 | MS.gene23337:CDS |
| GTGGTGACACCTGCAACTAT+CGG | 0.619034 | 4.4:-37289770 | MS.gene23337:CDS |
| GGGAGATAGAAGGCGCAGAA+GGG | 0.619859 | 4.4:+37288617 | None:intergenic |
| GAAGCCATCAATACCAACAC+AGG | 0.620335 | 4.4:-37287447 | MS.gene23337:CDS |
| ACCTGCAACTATCGGCCTGG+AGG | 0.621277 | 4.4:-37289762 | MS.gene23337:CDS |
| CTTCCCCGAAGGAATGGAGA+AGG | 0.623971 | 4.4:+37290784 | None:intergenic |
| TTGGTATTGATGGCTTCGGG+TGG | 0.625909 | 4.4:+37287453 | None:intergenic |
| TTTAGGCTATGGGATTGCTG+GGG | 0.629860 | 4.4:-37291167 | MS.gene23337:CDS |
| TTTCCTTCTCCATTCCTTCG+GGG | 0.631065 | 4.4:-37290787 | MS.gene23337:CDS |
| AAATGAGGTTGCGGTTATCG+AGG | 0.638411 | 4.4:+37293964 | None:intergenic |
| TTTACTCCGTACATCAACTC+AGG | 0.639144 | 4.4:+37290372 | None:intergenic |
| CATAACCAAAGACCAATAGC+AGG | 0.639786 | 4.4:+37293666 | None:intergenic |
| CAAGCATAGCAGTCATAAGG+AGG | 0.647209 | 4.4:+37287289 | None:intergenic |
| GCATTATTACATCCTCGAGC+CGG | 0.659051 | 4.4:-37293869 | MS.gene23337:CDS |
| GATCAGGTGTAAATGTGTAG+GGG | 0.673218 | 4.4:+37290008 | None:intergenic |
| TTACCCATTGAAATCCAACA+AGG | 0.673307 | 4.4:+37288735 | None:intergenic |
| GCAACAGCCAAAGCCTTCAG+GGG | 0.673686 | 4.4:+37291232 | None:intergenic |
| AATGTGTAGGGGAATAACCA+AGG | 0.674285 | 4.4:+37290019 | None:intergenic |
| CTTGGTATGAAAGACTCTTG+GGG | 0.674911 | 4.4:-37291256 | MS.gene23337:CDS |
| TACCCATTGAAATCCAACAA+GGG | 0.682977 | 4.4:+37288736 | None:intergenic |
| TCTGAGTATAAAATACCACT+GGG | 0.691613 | 4.4:+37288597 | None:intergenic |
| GAAGGGAATGAAGAGGTAAG+CGG | 0.691837 | 4.4:+37293928 | None:intergenic |
| GGGAATGAAGAGGTAAGCGG+CGG | 0.697962 | 4.4:+37293931 | None:intergenic |
| CTGCGCCTTCTATCTCCCAG+TGG | 0.701911 | 4.4:-37288612 | MS.gene23337:CDS |
| TTGTTGAGAAGGGAATGAAG+AGG | 0.725276 | 4.4:+37293921 | None:intergenic |
| TGATCAGATGGTCATCCAGG+AGG | 0.731780 | 4.4:-37289990 | MS.gene23337:intron |
| GTATCAATGAGACTCATCAA+CGG | 0.734956 | 4.4:+37293639 | None:intergenic |
| GTTGATGACTGAACTCTGGG+TGG | 0.747942 | 4.4:+37287422 | None:intergenic |
| GGTTATCGAGGTGAAGAGTG+TGG | 0.755430 | 4.4:+37293976 | None:intergenic |
| ACACCAAGAACAAATCAGCG+AGG | 0.790634 | 4.4:-37293781 | MS.gene23337:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATTATATATTGAC+AGG | - | chr4.4:37291159-37291178 | MS.gene23337:CDS | 10.0% |
| !! | CAATATATAATATAAATTCA+GGG | + | chr4.4:37291157-37291176 | None:intergenic | 10.0% |
| !! | TCAATATATAATATAAATTC+AGG | + | chr4.4:37291158-37291177 | None:intergenic | 10.0% |
| !!! | ATTAATTTTTAAATACTTGT+AGG | + | chr4.4:37293171-37293190 | None:intergenic | 10.0% |
| !!! | TCTTTTAATAGTAAATATAA+AGG | - | chr4.4:37289270-37289289 | MS.gene23337:intron | 10.0% |
| !!! | TTTTATTTTCTTTTTCTTAT+GGG | - | chr4.4:37288207-37288226 | MS.gene23337:intron | 10.0% |
| !!! | TTTTTATTTTCTTTTTCTTA+TGG | - | chr4.4:37288206-37288225 | MS.gene23337:intron | 10.0% |
| !! | AAAAAAATCTATTACTACAA+AGG | + | chr4.4:37293020-37293039 | None:intergenic | 15.0% |
| !! | AACTATAATATTTAGGTAAT+TGG | - | chr4.4:37293493-37293512 | MS.gene23337:intron | 15.0% |
| !! | AGAAATCATAAAACAATTTA+TGG | - | chr4.4:37289219-37289238 | MS.gene23337:intron | 15.0% |
| !! | ATGTTTGGATTTATTATTTA+AGG | - | chr4.4:37291571-37291590 | MS.gene23337:intron | 15.0% |
| !! | ATTAGTAATATCATAACTAT+TGG | - | chr4.4:37289952-37289971 | MS.gene23337:intron | 15.0% |
| !! | ATTCATACAATAAAATAAGA+CGG | - | chr4.4:37288721-37288740 | MS.gene23337:intron | 15.0% |
| !! | ATTTATTATTGAACAATTTC+TGG | - | chr4.4:37291793-37291812 | MS.gene23337:intron | 15.0% |
| !! | GTCAGTTTAAATAAAAATTT+AGG | + | chr4.4:37289862-37289881 | None:intergenic | 15.0% |
| !! | TAATAAGTAATTATTGTTGT+AGG | - | chr4.4:37290195-37290214 | MS.gene23337:intron | 15.0% |
| !! | TATTTCAGTAAATTGAAAAT+AGG | + | chr4.4:37290365-37290384 | None:intergenic | 15.0% |
| !! | TTAGTAATATCATAACTATT+GGG | - | chr4.4:37289953-37289972 | MS.gene23337:intron | 15.0% |
| !!! | AAAATATTTTGTTCTATTTG+TGG | - | chr4.4:37290581-37290600 | MS.gene23337:CDS | 15.0% |
| !!! | ATATAACAAGTGTTATTTTA+AGG | - | chr4.4:37292292-37292311 | MS.gene23337:intron | 15.0% |
| !!! | CATTTTCAATTAAATATAAG+AGG | + | chr4.4:37289821-37289840 | None:intergenic | 15.0% |
| !!! | TCAAATTTTATTAAGTAACA+CGG | + | chr4.4:37289716-37289735 | None:intergenic | 15.0% |
| !!! | TTGTAAATATTCTAAGTTTT+TGG | - | chr4.4:37288038-37288057 | MS.gene23337:intron | 15.0% |
| !! | AAATTAATGATATAGAAGAG+AGG | - | chr4.4:37288350-37288369 | MS.gene23337:intron | 20.0% |
| !! | AAATTGCGTTACATAAAAAT+TGG | + | chr4.4:37292471-37292490 | None:intergenic | 20.0% |
| !! | AAGTATTATGAATTTATGAG+AGG | + | chr4.4:37292154-37292173 | None:intergenic | 20.0% |
| !! | AATAATATCCAAAAGTTTGA+TGG | + | chr4.4:37288751-37288770 | None:intergenic | 20.0% |
| !! | AATTCATAATACTTCATAAG+AGG | - | chr4.4:37292160-37292179 | MS.gene23337:CDS | 20.0% |
| !! | ACATATATTGAAATTGATCA+AGG | - | chr4.4:37289368-37289387 | MS.gene23337:intron | 20.0% |
| !! | AGTAAATATAAAGGTTTGTA+TGG | - | chr4.4:37289279-37289298 | MS.gene23337:intron | 20.0% |
| !! | AGTTTATCCTTTAAATGTAA+CGG | - | chr4.4:37290619-37290638 | MS.gene23337:CDS | 20.0% |
| !! | ATTAGAATGTGTTACAAAAT+AGG | - | chr4.4:37292825-37292844 | MS.gene23337:intron | 20.0% |
| !! | CATATATTGAAATTGATCAA+GGG | - | chr4.4:37289369-37289388 | MS.gene23337:intron | 20.0% |
| !! | TGAACATATGTTTATAAGTA+GGG | - | chr4.4:37289565-37289584 | MS.gene23337:intron | 20.0% |
| !! | TGAATATACATAACAATGTA+TGG | + | chr4.4:37291128-37291147 | None:intergenic | 20.0% |
| !! | TTCATAAACATATTCTAACA+GGG | - | chr4.4:37292604-37292623 | MS.gene23337:intron | 20.0% |
| !! | TTCCTGAACTAATATTAAAA+TGG | + | chr4.4:37292760-37292779 | None:intergenic | 20.0% |
| !! | TTTCATAAACATATTCTAAC+AGG | - | chr4.4:37292603-37292622 | MS.gene23337:intron | 20.0% |
| !!! | AATAAACAGGTTTGAAATTA+AGG | - | chr4.4:37291408-37291427 | MS.gene23337:intron | 20.0% |
| !!! | ACAATCTTAATTTGAATTGA+AGG | + | chr4.4:37289178-37289197 | None:intergenic | 20.0% |
| !!! | ATTTTCTATCCAATAAGAAA+AGG | + | chr4.4:37288252-37288271 | None:intergenic | 20.0% |
| !!! | ATTTTGTATACCATAAGAAA+AGG | + | chr4.4:37287918-37287937 | None:intergenic | 20.0% |
| !!! | TATAAAAGTATCTGAATAGT+TGG | + | chr4.4:37293605-37293624 | None:intergenic | 20.0% |
| !!! | TATTGGTAACAAATTTTACT+TGG | - | chr4.4:37292415-37292434 | MS.gene23337:CDS | 20.0% |
| !!! | TCGTAACAGTATAAATTTTA+AGG | + | chr4.4:37293427-37293446 | None:intergenic | 20.0% |
| !!! | TTTTCTATCCAATAAGAAAA+GGG | + | chr4.4:37288251-37288270 | None:intergenic | 20.0% |
| !!! | TTTTGTATACCATAAGAAAA+GGG | + | chr4.4:37287917-37287936 | None:intergenic | 20.0% |
| ! | AAACTTTCCGTTACATTTAA+AGG | + | chr4.4:37290629-37290648 | None:intergenic | 25.0% |
| ! | AAATATGTTTGTGTAGGATA+GGG | - | chr4.4:37288848-37288867 | MS.gene23337:intron | 25.0% |
| ! | AAATGTATTGTAAATGCAAG+TGG | + | chr4.4:37292872-37292891 | None:intergenic | 25.0% |
| ! | AAGGAAATAGTATTGTTTAC+TGG | - | chr4.4:37287588-37287607 | MS.gene23337:intron | 25.0% |
| ! | AATAACCACTCAAATATTCT+AGG | - | chr4.4:37291949-37291968 | MS.gene23337:intron | 25.0% |
| ! | AATTACTGTTATCCCATAAA+AGG | + | chr4.4:37289009-37289028 | None:intergenic | 25.0% |
| ! | AGAATATTTGAGTGGTTATT+TGG | + | chr4.4:37291949-37291968 | None:intergenic | 25.0% |
| ! | AGTTGAATTACACATTATGT+AGG | - | chr4.4:37291032-37291051 | MS.gene23337:intron | 25.0% |
| ! | ATATTATATATTGACAGGCT+AGG | - | chr4.4:37291164-37291183 | MS.gene23337:CDS | 25.0% |
| ! | ATATTTACTCATGAAAAGCA+GGG | + | chr4.4:37288834-37288853 | None:intergenic | 25.0% |
| ! | ATGAGTAAATATGTTTGTGT+AGG | - | chr4.4:37288842-37288861 | MS.gene23337:intron | 25.0% |
| ! | ATTACTGTTATCCCATAAAA+GGG | + | chr4.4:37289008-37289027 | None:intergenic | 25.0% |
| ! | ATTGTTGTACAAAATGAACA+AGG | - | chr4.4:37293717-37293736 | MS.gene23337:CDS | 25.0% |
| ! | CAATTCCATCATTAACTTTA+TGG | - | chr4.4:37293554-37293573 | MS.gene23337:intron | 25.0% |
| ! | CATTAACTAATTATGATGTG+TGG | + | chr4.4:37290324-37290343 | None:intergenic | 25.0% |
| ! | CTACTTATAAACATATGTTC+AGG | + | chr4.4:37289566-37289585 | None:intergenic | 25.0% |
| ! | CTGAACATATGTTTATAAGT+AGG | - | chr4.4:37289564-37289583 | MS.gene23337:intron | 25.0% |
| ! | CTGAAGATATGTTTATTAGT+GGG | + | chr4.4:37289663-37289682 | None:intergenic | 25.0% |
| ! | GAACATATGTTTATAAGTAG+GGG | - | chr4.4:37289566-37289585 | MS.gene23337:intron | 25.0% |
| ! | GCTAGTATTATAAATGGAAT+TGG | - | chr4.4:37290067-37290086 | MS.gene23337:CDS | 25.0% |
| ! | GTAATTCACTAATGCATAAA+TGG | - | chr4.4:37289023-37289042 | MS.gene23337:intron | 25.0% |
| ! | GTAATTGGTTAAAATGATTG+AGG | - | chr4.4:37293508-37293527 | MS.gene23337:intron | 25.0% |
| ! | GTTTGTACAAGGAATAAATA+AGG | + | chr4.4:37291998-37292017 | None:intergenic | 25.0% |
| ! | TAAATATGTTTGTGTAGGAT+AGG | - | chr4.4:37288847-37288866 | MS.gene23337:intron | 25.0% |
| ! | TATATGTGAAAAAACGACAT+AGG | - | chr4.4:37293085-37293104 | MS.gene23337:intron | 25.0% |
| ! | TCACAAATTAGTTACCATTA+TGG | + | chr4.4:37292225-37292244 | None:intergenic | 25.0% |
| ! | TCCATTAACTTATCTGTTAT+CGG | + | chr4.4:37288172-37288191 | None:intergenic | 25.0% |
| ! | TGAAGATATGTTTATTAGTG+GGG | + | chr4.4:37289662-37289681 | None:intergenic | 25.0% |
| ! | TTTCTATCCAATAAGAAAAG+GGG | + | chr4.4:37288250-37288269 | None:intergenic | 25.0% |
| ! | TTTGTATACCATAAGAAAAG+GGG | + | chr4.4:37287916-37287935 | None:intergenic | 25.0% |
| !! | AAAGCAGAATCTTATTTGAA+AGG | + | chr4.4:37289332-37289351 | None:intergenic | 25.0% |
| !! | ATTGAGGTATAAGCATATTT+TGG | - | chr4.4:37293524-37293543 | MS.gene23337:intron | 25.0% |
| !! | CACACTGAATTAATTTCTTT+TGG | - | chr4.4:37289419-37289438 | MS.gene23337:intron | 25.0% |
| !! | CATAAAGTTAATGATGGAAT+TGG | + | chr4.4:37293556-37293575 | None:intergenic | 25.0% |
| !! | GAGGTTTTTATGAAATAAAC+AGG | - | chr4.4:37291395-37291414 | MS.gene23337:intron | 25.0% |
| !! | GTATATTTTGCTACATCAAT+GGG | - | chr4.4:37290680-37290699 | MS.gene23337:intron | 25.0% |
| !! | TAGCACTGTATATGAATTTT+AGG | + | chr4.4:37292577-37292596 | None:intergenic | 25.0% |
| !! | TATATACTGTTTTACACATC+TGG | - | chr4.4:37289761-37289780 | MS.gene23337:CDS | 25.0% |
| !! | TGTATATTTTGCTACATCAA+TGG | - | chr4.4:37290679-37290698 | MS.gene23337:intron | 25.0% |
| !! | TTTTATTCCCCTTTTCTTAT+TGG | - | chr4.4:37288240-37288259 | MS.gene23337:intron | 25.0% |
| !!! | ACTGTTTTTTGCGATTATTT+GGG | - | chr4.4:37287812-37287831 | MS.gene23337:intron | 25.0% |
| !!! | CTCCATTTTAATATTAGTTC+AGG | - | chr4.4:37292755-37292774 | MS.gene23337:intron | 25.0% |
| !!! | TACTGTTTTTTGCGATTATT+TGG | - | chr4.4:37287811-37287830 | MS.gene23337:intron | 25.0% |
| AAAAACCTCTGTATTTCCAT+TGG | + | chr4.4:37291384-37291403 | None:intergenic | 30.0% | |
| AAAACGACATAGGAGTAAAA+TGG | - | chr4.4:37293095-37293114 | MS.gene23337:intron | 30.0% | |
| AAACCGATACTGTATATATG+AGG | + | chr4.4:37290992-37291011 | None:intergenic | 30.0% | |
| AACAAAAGTCTTTATGGTAG+TGG | - | chr4.4:37288517-37288536 | MS.gene23337:intron | 30.0% | |
| AATATTGTGTCTATTAGGCT+CGG | - | chr4.4:37292628-37292647 | MS.gene23337:intron | 30.0% | |
| AATGTATGGAGAACATTGTA+AGG | + | chr4.4:37291114-37291133 | None:intergenic | 30.0% | |
| ACCGATAACAGATAAGTTAA+TGG | - | chr4.4:37288168-37288187 | MS.gene23337:intron | 30.0% | |
| AGGAATAGTTGCAAAATACA+AGG | + | chr4.4:37290746-37290765 | None:intergenic | 30.0% | |
| AGGGAAATATTGTGTCTATT+AGG | - | chr4.4:37292623-37292642 | MS.gene23337:intron | 30.0% | |
| ATCATTCTGTGCAGATATTT+AGG | - | chr4.4:37290094-37290113 | MS.gene23337:CDS | 30.0% | |
| ATTCAATGTAGACACAATTC+AGG | - | chr4.4:37292892-37292911 | MS.gene23337:intron | 30.0% | |
| ATTGAACAATTCATCAGTCA+TGG | + | chr4.4:37289062-37289081 | None:intergenic | 30.0% | |
| ATTTGAGTGGTTATTTGGAA+AGG | + | chr4.4:37291944-37291963 | None:intergenic | 30.0% | |
| CAAACTCATCCTTACAAAAT+TGG | + | chr4.4:37289610-37289629 | None:intergenic | 30.0% | |
| CAACCTCATATATACAGTAT+CGG | - | chr4.4:37290986-37291005 | MS.gene23337:intron | 30.0% | |
| CAGATCCATAAAGTTAATGA+TGG | + | chr4.4:37293562-37293581 | None:intergenic | 30.0% | |
| CATAAATGATTGAGCAGTTT+GGG | + | chr4.4:37290886-37290905 | None:intergenic | 30.0% | |
| CATATTTACTCATGAAAAGC+AGG | + | chr4.4:37288835-37288854 | None:intergenic | 30.0% | |
| CATCTTTGCAATACAATCAT+TGG | - | chr4.4:37293964-37293983 | MS.gene23337:CDS | 30.0% | |
| CCACTAATAAACATATCTTC+AGG | - | chr4.4:37289661-37289680 | MS.gene23337:intron | 30.0% | |
| CCAGTAACACTAAAGAATTA+AGG | - | chr4.4:37293631-37293650 | MS.gene23337:CDS | 30.0% | |
| CCATTATGGTCAAAATAGTA+CGG | + | chr4.4:37292211-37292230 | None:intergenic | 30.0% | |
| CCTGAAGATATGTTTATTAG+TGG | + | chr4.4:37289664-37289683 | None:intergenic | 30.0% | |
| CCTTAATTCTTTAGTGTTAC+TGG | + | chr4.4:37293634-37293653 | None:intergenic | 30.0% | |
| CGTTTGTATGCTAAAGATAT+AGG | + | chr4.4:37291648-37291667 | None:intergenic | 30.0% | |
| CTACTGTTCACAATGTTATT+TGG | - | chr4.4:37288933-37288952 | MS.gene23337:CDS | 30.0% | |
| GAAATTAAGGCTTATGTTAG+TGG | - | chr4.4:37291421-37291440 | MS.gene23337:intron | 30.0% | |
| GAACATTGTAAGGAAAACAT+CGG | + | chr4.4:37291104-37291123 | None:intergenic | 30.0% | |
| GAAGATATGTTTATTAGTGG+GGG | + | chr4.4:37289661-37289680 | None:intergenic | 30.0% | |
| GATAACTCAACTCTTATGTT+AGG | - | chr4.4:37290812-37290831 | MS.gene23337:CDS | 30.0% | |
| GCTGTTGCTAGTATTATAAA+TGG | - | chr4.4:37290061-37290080 | MS.gene23337:CDS | 30.0% | |
| GCTTTGATTAAGCTAGAAAA+TGG | + | chr4.4:37293776-37293795 | None:intergenic | 30.0% | |
| GGTACTAAATGTACATTTGT+CGG | + | chr4.4:37289111-37289130 | None:intergenic | 30.0% | |
| GTAATCAGAAGAAAAATACC+TGG | + | chr4.4:37289152-37289171 | None:intergenic | 30.0% | |
| GTTATAGATCTCTAAACTAG+AGG | + | chr4.4:37293295-37293314 | None:intergenic | 30.0% | |
| TAAAGATATAGGTCAGATAC+TGG | + | chr4.4:37291637-37291656 | None:intergenic | 30.0% | |
| TAACTATTGGAGCTATACTT+GGG | - | chr4.4:37291206-37291225 | MS.gene23337:CDS | 30.0% | |
| TAATGTATGTGTGATGTGTA+TGG | - | chr4.4:37287759-37287778 | MS.gene23337:intron | 30.0% | |
| TACACATCTGGCTAAAATTT+CGG | - | chr4.4:37289773-37289792 | MS.gene23337:CDS | 30.0% | |
| TACTGTTACGAGAAAATGAT+TGG | - | chr4.4:37293436-37293455 | MS.gene23337:CDS | 30.0% | |
| TATATCCATTATCCGCTATA+AGG | + | chr4.4:37288148-37288167 | None:intergenic | 30.0% | |
| TCTGAGTATAAAATACCACT+GGG | + | chr4.4:37292684-37292703 | None:intergenic | 30.0% | |
| TCTTGCAACAAAAGTCTTTA+TGG | - | chr4.4:37288511-37288530 | MS.gene23337:intron | 30.0% | |
| TGAACTTATAATTGTGTGAG+TGG | - | chr4.4:37287957-37287976 | MS.gene23337:intron | 30.0% | |
| TGAATTACACATTATGTAGG+TGG | - | chr4.4:37291035-37291054 | MS.gene23337:intron | 30.0% | |
| TGATTAAGCTAGAAAATGGA+AGG | + | chr4.4:37293772-37293791 | None:intergenic | 30.0% | |
| TGCATTAAACTGATAGAAAC+TGG | - | chr4.4:37291739-37291758 | MS.gene23337:intron | 30.0% | |
| TGTATGTTCCATCTATGATT+GGG | + | chr4.4:37291828-37291847 | None:intergenic | 30.0% | |
| TGTATTTGTAAACTGAGAGT+TGG | - | chr4.4:37288283-37288302 | MS.gene23337:intron | 30.0% | |
| TTAACTATTGGAGCTATACT+TGG | - | chr4.4:37291205-37291224 | MS.gene23337:CDS | 30.0% | |
| TTCAATGTAGACACAATTCA+GGG | - | chr4.4:37292893-37292912 | MS.gene23337:intron | 30.0% | |
| TTCTGAGTATAAAATACCAC+TGG | + | chr4.4:37292685-37292704 | None:intergenic | 30.0% | |
| TTGAACAATTCATCAGTCAT+GGG | + | chr4.4:37289061-37289080 | None:intergenic | 30.0% | |
| TTGTATGTTCCATCTATGAT+TGG | + | chr4.4:37291829-37291848 | None:intergenic | 30.0% | |
| TTTATAAGTTTGTCAACGAG+TGG | - | chr4.4:37292366-37292385 | MS.gene23337:CDS | 30.0% | |
| TTTGAGTGGTTATTTGGAAA+GGG | + | chr4.4:37291943-37291962 | None:intergenic | 30.0% | |
| ! | AGTTGAAGACTGTATAGTTT+TGG | - | chr4.4:37292730-37292749 | MS.gene23337:intron | 30.0% |
| ! | ATTGAACAATTTCTGGAGAA+AGG | - | chr4.4:37291800-37291819 | MS.gene23337:CDS | 30.0% |
| ! | CAATTTTGTAAGGATGAGTT+TGG | - | chr4.4:37289608-37289627 | MS.gene23337:intron | 30.0% |
| ! | GTGTATTTTCTGTTTGTACA+AGG | + | chr4.4:37292009-37292028 | None:intergenic | 30.0% |
| ! | TACTTGTTGAACAGAGTATA+TGG | - | chr4.4:37287556-37287575 | MS.gene23337:intron | 30.0% |
| ! | TCTTACAAGCCAATTTTGTA+AGG | - | chr4.4:37289598-37289617 | MS.gene23337:intron | 30.0% |
| ! | TCTTTATTCCCCTTTTCTTA+TGG | - | chr4.4:37287905-37287924 | MS.gene23337:intron | 30.0% |
| ! | TTATCATTTTGTTAGACCCT+TGG | + | chr4.4:37293249-37293268 | None:intergenic | 30.0% |
| ! | TTGTTGTTCCCTATTCTTTA+CGG | - | chr4.4:37288432-37288451 | MS.gene23337:intron | 30.0% |
| !! | ATATCTGTCTTGCTTTTCAT+TGG | - | chr4.4:37288888-37288907 | MS.gene23337:CDS | 30.0% |
| !! | ATTTGTCTCATTGGTGTTAA+AGG | - | chr4.4:37290552-37290571 | MS.gene23337:intron | 30.0% |
| !! | CTAAGGTCTCTTTTAACTAT+TGG | - | chr4.4:37291193-37291212 | MS.gene23337:CDS | 30.0% |
| !! | CTTCACATAAGCTATTTTCA+AGG | + | chr4.4:37289899-37289918 | None:intergenic | 30.0% |
| !! | GGAAAGTTTTGATGTTTAGA+TGG | - | chr4.4:37290640-37290659 | MS.gene23337:intron | 30.0% |
| !! | TAATGTTCTAAGGTGTTTAG+TGG | - | chr4.4:37288386-37288405 | MS.gene23337:intron | 30.0% |
| !! | TTGTGTATATTTGCTTTTGC+AGG | - | chr4.4:37292326-37292345 | MS.gene23337:intron | 30.0% |
| !! | TTTTACATTGGTTGTGAATG+AGG | - | chr4.4:37287984-37288003 | MS.gene23337:intron | 30.0% |
| !!! | CTTCTTTCTTTTTGGTTTGA+GGG | - | chr4.4:37291060-37291079 | MS.gene23337:intron | 30.0% |
| !!! | CTTTTCATTGGATTAGTATG+TGG | - | chr4.4:37288900-37288919 | MS.gene23337:CDS | 30.0% |
| !!! | TCTTCTTTCTTTTTGGTTTG+AGG | - | chr4.4:37291059-37291078 | MS.gene23337:intron | 30.0% |
| !!! | TTCTTTCTTTTTGGTTTGAG+GGG | - | chr4.4:37291061-37291080 | MS.gene23337:intron | 30.0% |
| AAAATCAAAAACTGACCTCC+TGG | + | chr4.4:37291306-37291325 | None:intergenic | 35.0% | |
| AACAACCTGAAAACAAGAAG+GGG | + | chr4.4:37290422-37290441 | None:intergenic | 35.0% | |
| AACACCAATGAGACAAATAC+AGG | + | chr4.4:37290550-37290569 | None:intergenic | 35.0% | |
| AATGGTGTTCTCACATTTCT+TGG | - | chr4.4:37293113-37293132 | MS.gene23337:intron | 35.0% | |
| ACAAGAACAAGAAGAAGTGA+AGG | - | chr4.4:37287530-37287549 | MS.gene23337:CDS | 35.0% | |
| ACCAATCCAACAAGTAAAGA+AGG | + | chr4.4:37289469-37289488 | None:intergenic | 35.0% | |
| AGAACAGATGGACAAAAACA+TGG | - | chr4.4:37291884-37291903 | MS.gene23337:intron | 35.0% | |
| AGTAAATCGGAGTTTGGTAA+AGG | - | chr4.4:37290923-37290942 | MS.gene23337:intron | 35.0% | |
| AGTGTGACTAAATCAAGTAG+AGG | + | chr4.4:37289405-37289424 | None:intergenic | 35.0% | |
| ATTAAGGCTTATGTTAGTGG+TGG | - | chr4.4:37291424-37291443 | MS.gene23337:intron | 35.0% | |
| ATTCTCCCATCAAGTTAACA+CGG | + | chr4.4:37288482-37288501 | None:intergenic | 35.0% | |
| CAACAACCTGAAAACAAGAA+GGG | + | chr4.4:37290423-37290442 | None:intergenic | 35.0% | |
| CATATGTTTATAAGTAGGGG+AGG | - | chr4.4:37289569-37289588 | MS.gene23337:intron | 35.0% | |
| CGATACTGTATATATGAGGT+TGG | + | chr4.4:37290988-37291007 | None:intergenic | 35.0% | |
| CTCATCTGTCTAATGTTCTA+AGG | - | chr4.4:37288376-37288395 | MS.gene23337:intron | 35.0% | |
| GAAACGTTAAACAGAACAGA+TGG | - | chr4.4:37291872-37291891 | MS.gene23337:intron | 35.0% | |
| GAAATATGGGATGTGATATG+GGG | - | chr4.4:37292959-37292978 | MS.gene23337:intron | 35.0% | |
| GAGTATATGGATTCAGATGA+AGG | - | chr4.4:37287569-37287588 | MS.gene23337:intron | 35.0% | |
| GATAACCAATGGAAATACAG+AGG | - | chr4.4:37291376-37291395 | MS.gene23337:intron | 35.0% | |
| GCAGATGAGATATCATAACA+CGG | + | chr4.4:37289799-37289818 | None:intergenic | 35.0% | |
| GCATAAATGATTGAGCAGTT+TGG | + | chr4.4:37290887-37290906 | None:intergenic | 35.0% | |
| GGAAATATGGGATGTGATAT+GGG | - | chr4.4:37292958-37292977 | MS.gene23337:intron | 35.0% | |
| GGTCATATCTCATCCAATAT+AGG | - | chr4.4:37289682-37289701 | MS.gene23337:intron | 35.0% | |
| GTATCAATGAGACTCATCAA+CGG | + | chr4.4:37287642-37287661 | None:intergenic | 35.0% | |
| GTCAAAATAGTACGGTTTAC+TGG | + | chr4.4:37292203-37292222 | None:intergenic | 35.0% | |
| GTTATCAATGATCGTGAGTT+TGG | + | chr4.4:37290798-37290817 | None:intergenic | 35.0% | |
| TAATCGCAAAAAACAGTAGC+AGG | + | chr4.4:37287809-37287828 | None:intergenic | 35.0% | |
| TACCCATTGAAATCCAACAA+GGG | + | chr4.4:37292545-37292564 | None:intergenic | 35.0% | |
| TACTCATTATCAGCCAATGT+GGG | + | chr4.4:37288331-37288350 | None:intergenic | 35.0% | |
| TACTGTATATATGAGGTTGG+AGG | + | chr4.4:37290985-37291004 | None:intergenic | 35.0% | |
| TAGTTGGAACATTTGTTCCT+TGG | - | chr4.4:37291242-37291261 | MS.gene23337:CDS | 35.0% | |
| TATACTCAGAAGATGTAAGC+CGG | - | chr4.4:37292694-37292713 | MS.gene23337:intron | 35.0% | |
| TCAACTCTTATGTTAGGTCA+TGG | - | chr4.4:37290818-37290837 | MS.gene23337:CDS | 35.0% | |
| TCTTGGTATGAAAGACTCTT+GGG | - | chr4.4:37290021-37290040 | MS.gene23337:CDS | 35.0% | |
| TGATCAGGTGTAAATGTGTA+GGG | + | chr4.4:37291274-37291293 | None:intergenic | 35.0% | |
| TGTGCAGATATTTAGGCTAT+GGG | - | chr4.4:37290101-37290120 | MS.gene23337:intron | 35.0% | |
| TTACCCATTGAAATCCAACA+AGG | + | chr4.4:37292546-37292565 | None:intergenic | 35.0% | |
| TTACTCATTATCAGCCAATG+TGG | + | chr4.4:37288332-37288351 | None:intergenic | 35.0% | |
| TTCAAGTGCTCTTGTACTAT+TGG | - | chr4.4:37292398-37292417 | MS.gene23337:CDS | 35.0% | |
| TTCCCTTGTTGGATTTCAAT+GGG | - | chr4.4:37292540-37292559 | MS.gene23337:intron | 35.0% | |
| TTTCCCTTGTTGGATTTCAA+TGG | - | chr4.4:37292539-37292558 | MS.gene23337:intron | 35.0% | |
| ! | ACAAATTTTACTTGGTCTGC+TGG | - | chr4.4:37292423-37292442 | MS.gene23337:intron | 35.0% |
| ! | ACGGAAAACCATCAAACTTT+TGG | - | chr4.4:37288740-37288759 | MS.gene23337:CDS | 35.0% |
| ! | AGGTGGATCTTCTTTCTTTT+TGG | - | chr4.4:37291052-37291071 | MS.gene23337:intron | 35.0% |
| ! | AGTTGATGTACGGAGTAAAT+CGG | - | chr4.4:37290910-37290929 | MS.gene23337:intron | 35.0% |
| ! | ATTTTCCTTCTCCATTCCTT+CGG | - | chr4.4:37290489-37290508 | MS.gene23337:intron | 35.0% |
| ! | TCAGCTTTGCTATAAACTCT+TGG | + | chr4.4:37293213-37293232 | None:intergenic | 35.0% |
| ! | TGTGTGATGTGTATGGATTT+TGG | - | chr4.4:37287766-37287785 | MS.gene23337:intron | 35.0% |
| !! | AAAGTTGATGACTGAACTCT+GGG | + | chr4.4:37293862-37293881 | None:intergenic | 35.0% |
| !! | CAAAATTGGCTTGTAAGACA+AGG | + | chr4.4:37289596-37289615 | None:intergenic | 35.0% |
| !! | CTATTAGGCTCGGTTTTTAA+TGG | - | chr4.4:37292638-37292657 | MS.gene23337:intron | 35.0% |
| !! | TCAATTGAACTTGCTGCTTT+AGG | - | chr4.4:37287684-37287703 | MS.gene23337:intron | 35.0% |
| !! | TGTAATAATGCGTTGGTTTG+TGG | + | chr4.4:37287400-37287419 | None:intergenic | 35.0% |
| !! | TTTATGCCTGAGTTGATGTA+CGG | - | chr4.4:37290900-37290919 | MS.gene23337:intron | 35.0% |
| !!! | ATGCCTTTTTCAGCTTTTAC+TGG | - | chr4.4:37289084-37289103 | MS.gene23337:intron | 35.0% |
| !!! | ATTTTGGTTTCTACATGAGC+AGG | - | chr4.4:37287782-37287801 | MS.gene23337:intron | 35.0% |
| !!! | CCGTACTATTTTGACCATAA+TGG | - | chr4.4:37292208-37292227 | MS.gene23337:intron | 35.0% |
| !!! | GTGAGTGGTTAGTTTTACAT+TGG | - | chr4.4:37287972-37287991 | MS.gene23337:intron | 35.0% |
| !!! | TTCTTTTGGTGTTAGATTCG+AGG | - | chr4.4:37289433-37289452 | MS.gene23337:intron | 35.0% |
| AAACTGACACTCGCAATTTC+TGG | + | chr4.4:37292120-37292139 | None:intergenic | 40.0% | |
| AAATACCACTGGGAGATAGA+AGG | + | chr4.4:37292674-37292693 | None:intergenic | 40.0% | |
| AACTGACACTCGCAATTTCT+GGG | + | chr4.4:37292119-37292138 | None:intergenic | 40.0% | |
| AACTTGATGGGAGAATGAGA+TGG | - | chr4.4:37288486-37288505 | MS.gene23337:intron | 40.0% | |
| AAGACCAAGGCTCATGTTTA+AGG | - | chr4.4:37291675-37291694 | MS.gene23337:intron | 40.0% | |
| AAGTCCTTAAACATGAGCCT+TGG | + | chr4.4:37291682-37291701 | None:intergenic | 40.0% | |
| AATCGGAGTTTGGTAAAGGT+TGG | - | chr4.4:37290927-37290946 | MS.gene23337:intron | 40.0% | |
| AATGTGCAGATAGACAGCAA+AGG | + | chr4.4:37290766-37290785 | None:intergenic | 40.0% | |
| AATGTGTAGGGGAATAACCA+AGG | + | chr4.4:37291262-37291281 | None:intergenic | 40.0% | |
| ACAACCTGAAAACAAGAAGG+GGG | + | chr4.4:37290421-37290440 | None:intergenic | 40.0% | |
| ACAATTCATCAGTCATGGGT+AGG | + | chr4.4:37289057-37289076 | None:intergenic | 40.0% | |
| ACACCCAACAATGACAAAAG+CGG | - | chr4.4:37288653-37288672 | MS.gene23337:intron | 40.0% | |
| ACATCCCATATTTCCCTACT+TGG | + | chr4.4:37292953-37292972 | None:intergenic | 40.0% | |
| ACCACTAGCGCTAAAAAGTA+CGG | + | chr4.4:37291493-37291512 | None:intergenic | 40.0% | |
| ACTTGATGGGAGAATGAGAT+GGG | - | chr4.4:37288487-37288506 | MS.gene23337:intron | 40.0% | |
| ACTTGTATTGGAAGCCAAGT+AGG | - | chr4.4:37292936-37292955 | MS.gene23337:intron | 40.0% | |
| AGGTGATATGTTCACTGTTC+AGG | + | chr4.4:37293000-37293019 | None:intergenic | 40.0% | |
| ATCAATGGGTACACATGCAA+CGG | - | chr4.4:37290694-37290713 | MS.gene23337:intron | 40.0% | |
| ATTTAGGCTATGGGATTGCT+GGG | - | chr4.4:37290110-37290129 | MS.gene23337:intron | 40.0% | |
| CAAAAACATGGTTCCTACCA+AGG | - | chr4.4:37291896-37291915 | MS.gene23337:intron | 40.0% | |
| CAAGACTGCGTGATAAAATG+TGG | + | chr4.4:37290006-37290025 | None:intergenic | 40.0% | |
| CACATTTACACCTGATCAGA+TGG | - | chr4.4:37291276-37291295 | MS.gene23337:intron | 40.0% | |
| CAGATCTTACGAAGCAGATA+TGG | - | chr4.4:37292499-37292518 | MS.gene23337:intron | 40.0% | |
| CATAACCAAAGACCAATAGC+AGG | + | chr4.4:37287615-37287634 | None:intergenic | 40.0% | |
| CTCATTGATACTGCTGTTGT+TGG | - | chr4.4:37287651-37287670 | MS.gene23337:intron | 40.0% | |
| CTCTCCAACAAGTGGTATTT+CGG | - | chr4.4:37288456-37288475 | MS.gene23337:intron | 40.0% | |
| CTGATCAGGTGTAAATGTGT+AGG | + | chr4.4:37291275-37291294 | None:intergenic | 40.0% | |
| CTGTGCAGATATTTAGGCTA+TGG | - | chr4.4:37290100-37290119 | MS.gene23337:CDS | 40.0% | |
| CTTGGTATGAAAGACTCTTG+GGG | - | chr4.4:37290022-37290041 | MS.gene23337:CDS | 40.0% | |
| CTTGTATTGGAAGCCAAGTA+GGG | - | chr4.4:37292937-37292956 | MS.gene23337:intron | 40.0% | |
| GAAAGGTTCCCAATCATAGA+TGG | - | chr4.4:37291817-37291836 | MS.gene23337:CDS | 40.0% | |
| GAAGCCAAGTAGGGAAATAT+GGG | - | chr4.4:37292946-37292965 | MS.gene23337:intron | 40.0% | |
| GATCAGGTGTAAATGTGTAG+GGG | + | chr4.4:37291273-37291292 | None:intergenic | 40.0% | |
| GATTGAAATGCAGTGAGAGT+TGG | + | chr4.4:37287281-37287300 | None:intergenic | 40.0% | |
| GCAACAACCTGAAAACAAGA+AGG | + | chr4.4:37290424-37290443 | None:intergenic | 40.0% | |
| GCTGATAAGCTACCTTATAG+CGG | - | chr4.4:37288133-37288152 | MS.gene23337:intron | 40.0% | |
| GGATTTCAATGGGTAAGACT+CGG | - | chr4.4:37292550-37292569 | MS.gene23337:intron | 40.0% | |
| GGGAAATATGGGATGTGATA+TGG | - | chr4.4:37292957-37292976 | MS.gene23337:intron | 40.0% | |
| GGGATCCTAGAATATTTGAG+TGG | + | chr4.4:37291957-37291976 | None:intergenic | 40.0% | |
| GGTCCAGTAAAAGCTGAAAA+AGG | + | chr4.4:37289090-37289109 | None:intergenic | 40.0% | |
| GGTGATATGTTCACTGTTCA+GGG | + | chr4.4:37292999-37293018 | None:intergenic | 40.0% | |
| GTCTTGGTATGAAAGACTCT+TGG | - | chr4.4:37290020-37290039 | MS.gene23337:CDS | 40.0% | |
| TATGTTTGTGTAGGATAGGG+AGG | - | chr4.4:37288851-37288870 | MS.gene23337:intron | 40.0% | |
| TATTTAGGCTATGGGATTGC+TGG | - | chr4.4:37290109-37290128 | MS.gene23337:intron | 40.0% | |
| TCGAGGATGTAATAATGCGT+TGG | + | chr4.4:37287407-37287426 | None:intergenic | 40.0% | |
| TCTAATCGAGAAGGGATACA+AGG | - | chr4.4:37290465-37290484 | MS.gene23337:intron | 40.0% | |
| TGCAGCTAATACTTATGTCC+AGG | - | chr4.4:37289131-37289150 | MS.gene23337:intron | 40.0% | |
| TGCTCCTGTATTTGTCTCAT+TGG | - | chr4.4:37290543-37290562 | MS.gene23337:intron | 40.0% | |
| TGGACATAAGTATTAGCTGC+AGG | + | chr4.4:37289132-37289151 | None:intergenic | 40.0% | |
| TGGAGAGTCCGTAAAGAATA+GGG | + | chr4.4:37288443-37288462 | None:intergenic | 40.0% | |
| TGGTGTAGATGTGCAAGTTT+GGG | - | chr4.4:37288058-37288077 | MS.gene23337:intron | 40.0% | |
| TGTTCTTAAGCTGCGAATAG+AGG | - | chr4.4:37293398-37293417 | MS.gene23337:intron | 40.0% | |
| TTGAATGGGAAATGAGGTTG+CGG | + | chr4.4:37287326-37287345 | None:intergenic | 40.0% | |
| TTGAGTGTTTAGTCCCACAT+TGG | - | chr4.4:37288315-37288334 | MS.gene23337:intron | 40.0% | |
| TTGGAGAGTCCGTAAAGAAT+AGG | + | chr4.4:37288444-37288463 | None:intergenic | 40.0% | |
| TTGGTGTAGATGTGCAAGTT+TGG | - | chr4.4:37288057-37288076 | MS.gene23337:intron | 40.0% | |
| TTGTTGAGAAGGGAATGAAG+AGG | + | chr4.4:37287360-37287379 | None:intergenic | 40.0% | |
| TTGTTTACTGGACCTGCTAT+TGG | - | chr4.4:37287600-37287619 | MS.gene23337:intron | 40.0% | |
| TTTACGTTGTGCACAGTATG+TGG | - | chr4.4:37290849-37290868 | MS.gene23337:intron | 40.0% | |
| TTTACTCCGTACATCAACTC+AGG | + | chr4.4:37290909-37290928 | None:intergenic | 40.0% | |
| ! | CACATTTTATCACGCAGTCT+TGG | - | chr4.4:37290004-37290023 | MS.gene23337:CDS | 40.0% |
| ! | CATTTTGTTAGACCCTTGGT+TGG | + | chr4.4:37293245-37293264 | None:intergenic | 40.0% |
| ! | GCCTTCTTTACTTGTTGGAT+TGG | - | chr4.4:37289465-37289484 | MS.gene23337:intron | 40.0% |
| ! | GTGTGAAGAAGCTTCACTTT+TGG | + | chr4.4:37293945-37293964 | None:intergenic | 40.0% |
| ! | TTACTGGTCCTGACTTGTAT+TGG | - | chr4.4:37292924-37292943 | MS.gene23337:intron | 40.0% |
| ! | TTTTCCTTCTCCATTCCTTC+GGG | - | chr4.4:37290490-37290509 | MS.gene23337:intron | 40.0% |
| !! | AAACCTCGCTGATTTGTTCT+TGG | + | chr4.4:37287503-37287522 | None:intergenic | 40.0% |
| !! | AGCTACCTTATAGCGGATAA+TGG | - | chr4.4:37288140-37288159 | MS.gene23337:intron | 40.0% |
| !! | CATTGGATTAGTATGTGGCT+TGG | - | chr4.4:37288905-37288924 | MS.gene23337:CDS | 40.0% |
| !! | GAAAGTTGATGACTGAACTC+TGG | + | chr4.4:37293863-37293882 | None:intergenic | 40.0% |
| !! | GCTATTGGTCTTTGGTTATG+TGG | - | chr4.4:37287615-37287634 | MS.gene23337:intron | 40.0% |
| !! | GTATATTTGCTTTTGCAGGC+TGG | - | chr4.4:37292330-37292349 | MS.gene23337:CDS | 40.0% |
| !! | GTCTTTATGGTAGTGGAGTA+AGG | - | chr4.4:37288524-37288543 | MS.gene23337:intron | 40.0% |
| !! | TAATGCGTTGGTTTGTGGAA+TGG | + | chr4.4:37287395-37287414 | None:intergenic | 40.0% |
| !! | TGTGTTGGTATTGATGGCTT+CGG | + | chr4.4:37293832-37293851 | None:intergenic | 40.0% |
| !! | TTGGTGTTAGATTCGAGGAT+TGG | - | chr4.4:37289438-37289457 | MS.gene23337:intron | 40.0% |
| !! | TTTATGGTAGTGGAGTAAGG+TGG | - | chr4.4:37288527-37288546 | MS.gene23337:intron | 40.0% |
| !!! | CTATACTTGGGCTGCTTTTT+GGG | - | chr4.4:37291218-37291237 | MS.gene23337:CDS | 40.0% |
| !!! | TCTTGATTTTGAAGTACGCG+AGG | + | chr4.4:37287459-37287478 | None:intergenic | 40.0% |
| AAATGAGGTTGCGGTTATCG+AGG | + | chr4.4:37287317-37287336 | None:intergenic | 45.0% | |
| AAATTCCTTCCCCGAAGGAA+TGG | + | chr4.4:37290503-37290522 | None:intergenic | 45.0% | |
| AAGTCTCTCGAATCCTTGGT+AGG | + | chr4.4:37291912-37291931 | None:intergenic | 45.0% | |
| AATGTAGACAAGGGCGATAG+TGG | + | chr4.4:37291346-37291365 | None:intergenic | 45.0% | |
| ACACCAAGAACAAATCAGCG+AGG | - | chr4.4:37287497-37287516 | MS.gene23337:CDS | 45.0% | |
| AGAAGATGTAAGCCGGTATG+CGG | - | chr4.4:37292701-37292720 | MS.gene23337:intron | 45.0% | |
| AGCCAGACTCTAATCGAGAA+GGG | - | chr4.4:37290457-37290476 | MS.gene23337:intron | 45.0% | |
| AGGATAGACAAGACGTAGTC+AGG | + | chr4.4:37291978-37291997 | None:intergenic | 45.0% | |
| AGTTCCACCTTGGATGAGTA+TGG | - | chr4.4:37289540-37289559 | MS.gene23337:intron | 45.0% | |
| ATCCCTTCTCGATTAGAGTC+TGG | + | chr4.4:37290462-37290481 | None:intergenic | 45.0% | |
| ATTCAGGGCAGTGAAGTTAC+TGG | - | chr4.4:37292908-37292927 | MS.gene23337:intron | 45.0% | |
| CAAACGAGTGTCAAAGACCA+AGG | - | chr4.4:37291662-37291681 | MS.gene23337:intron | 45.0% | |
| CAAGCATAGCAGTCATAAGG+AGG | + | chr4.4:37293992-37294011 | None:intergenic | 45.0% | |
| CACGGTTGAGAGTCCTATAT+TGG | + | chr4.4:37289698-37289717 | None:intergenic | 45.0% | |
| CCCATAAAAGGGACACAACT+GGG | + | chr4.4:37288997-37289016 | None:intergenic | 45.0% | |
| CTTGGCTTCCAATACAAGTC+AGG | + | chr4.4:37292935-37292954 | None:intergenic | 45.0% | |
| CTTTATGGATCTGCACTTGC+TGG | - | chr4.4:37293569-37293588 | MS.gene23337:intron | 45.0% | |
| GAAATCCTCACCTTACAAGC+CGG | + | chr4.4:37289639-37289658 | None:intergenic | 45.0% | |
| GAAGCCATCAATACCAACAC+AGG | - | chr4.4:37293831-37293850 | MS.gene23337:CDS | 45.0% | |
| GAAGGGAATGAAGAGGTAAG+CGG | + | chr4.4:37287353-37287372 | None:intergenic | 45.0% | |
| GATACTGCTGTTGTTGGTCA+AGG | - | chr4.4:37287657-37287676 | MS.gene23337:intron | 45.0% | |
| GATATGTTCACTGTTCAGGG+TGG | + | chr4.4:37292996-37293015 | None:intergenic | 45.0% | |
| GATTGAGCAGTTTGGGAGAT+AGG | + | chr4.4:37290879-37290898 | None:intergenic | 45.0% | |
| GCATGGCCTTCTTTACTTGT+TGG | - | chr4.4:37289460-37289479 | MS.gene23337:intron | 45.0% | |
| GCATTATTACATCCTCGAGC+CGG | - | chr4.4:37287409-37287428 | MS.gene23337:CDS | 45.0% | |
| GGAAGCCAAGTAGGGAAATA+TGG | - | chr4.4:37292945-37292964 | MS.gene23337:intron | 45.0% | |
| GGACAAGCATAGCAGTCATA+AGG | + | chr4.4:37293995-37294014 | None:intergenic | 45.0% | |
| GGATAGACAAGACGTAGTCA+GGG | + | chr4.4:37291977-37291996 | None:intergenic | 45.0% | |
| GTACGGAGTAAATCGGAGTT+TGG | - | chr4.4:37290917-37290936 | MS.gene23337:intron | 45.0% | |
| GTCGATTGCTACGTCGAATA+TGG | - | chr4.4:37287853-37287872 | MS.gene23337:intron | 45.0% | |
| GTGGTTATTTGGAAAGGGAG+TGG | + | chr4.4:37291938-37291957 | None:intergenic | 45.0% | |
| GTGTGATCATGCAGATGCAT+AGG | - | chr4.4:37291458-37291477 | MS.gene23337:intron | 45.0% | |
| GTGTGTTAAGAGTTCCACCT+TGG | - | chr4.4:37289530-37289549 | MS.gene23337:intron | 45.0% | |
| TACCAAGGATTCGAGAGACT+TGG | - | chr4.4:37291911-37291930 | MS.gene23337:intron | 45.0% | |
| TATCGCCCTTGTCTACATTG+CGG | - | chr4.4:37291347-37291366 | MS.gene23337:intron | 45.0% | |
| TCCCATAAAAGGGACACAAC+TGG | + | chr4.4:37288998-37289017 | None:intergenic | 45.0% | |
| TGAAAGCCAAGACCAACCAA+GGG | - | chr4.4:37293230-37293249 | MS.gene23337:intron | 45.0% | |
| TGATGTGCGAGACTCATAAC+TGG | - | chr4.4:37288587-37288606 | MS.gene23337:CDS | 45.0% | |
| TTTACGGACTCTCCAACAAG+TGG | - | chr4.4:37288448-37288467 | MS.gene23337:intron | 45.0% | |
| TTTAGGCTATGGGATTGCTG+GGG | - | chr4.4:37290111-37290130 | MS.gene23337:intron | 45.0% | |
| TTTCCTTCTCCATTCCTTCG+GGG | - | chr4.4:37290491-37290510 | MS.gene23337:intron | 45.0% | |
| ! | CCCAGTTGTGTCCCTTTTAT+GGG | - | chr4.4:37288994-37289013 | MS.gene23337:intron | 45.0% |
| ! | GTTAGATTCGAGGATTGGCA+TGG | - | chr4.4:37289443-37289462 | MS.gene23337:intron | 45.0% |
| ! | TCAACTTTTGCTCCGCATAC+CGG | + | chr4.4:37292716-37292735 | None:intergenic | 45.0% |
| ! | TGCTACTGCACTTGCTAAAC+AGG | - | chr4.4:37287877-37287896 | MS.gene23337:intron | 45.0% |
| ! | TTCGGCCGTGTTAACTTGAT+GGG | - | chr4.4:37288474-37288493 | MS.gene23337:intron | 45.0% |
| ! | TTTCGGCCGTGTTAACTTGA+TGG | - | chr4.4:37288473-37288492 | MS.gene23337:intron | 45.0% |
| ! | TTTGAAGTACGCGAGGTGTT+AGG | + | chr4.4:37287452-37287471 | None:intergenic | 45.0% |
| ! | TTTGGAGCTGGGAAGAGAAA+GGG | + | chr4.4:37293927-37293946 | None:intergenic | 45.0% |
| !! | ATTTGCTTTTGCAGGCTGGA+CGG | - | chr4.4:37292334-37292353 | MS.gene23337:CDS | 45.0% |
| !! | CCTCCGCTTTTGTCATTGTT+GGG | + | chr4.4:37288659-37288678 | None:intergenic | 45.0% |
| !! | GTGTTGGTATTGATGGCTTC+GGG | + | chr4.4:37293831-37293850 | None:intergenic | 45.0% |
| !! | TCCGTACTTTTTAGCGCTAG+TGG | - | chr4.4:37291489-37291508 | MS.gene23337:intron | 45.0% |
| !! | TCCTCCGCTTTTGTCATTGT+TGG | + | chr4.4:37288660-37288679 | None:intergenic | 45.0% |
| !! | TTGGTTTGTGGAATGGATGG+TGG | + | chr4.4:37287388-37287407 | None:intergenic | 45.0% |
| !!! | AGAAGCTTCACTTTTGGAGC+TGG | + | chr4.4:37293939-37293958 | None:intergenic | 45.0% |
| !!! | GAAGCTTCACTTTTGGAGCT+GGG | + | chr4.4:37293938-37293957 | None:intergenic | 45.0% |
| !!! | GCTATACTTGGGCTGCTTTT+TGG | - | chr4.4:37291217-37291236 | MS.gene23337:CDS | 45.0% |
| !!! | TACACCCCCTTCTTGTTTTC+AGG | - | chr4.4:37290414-37290433 | MS.gene23337:CDS | 45.0% |
| !!! | TTTTGGAGCTGGGAAGAGAA+AGG | + | chr4.4:37293928-37293947 | None:intergenic | 45.0% |
| !!! | TTTTATTAACTATAATATTT+AGG | - | chr4.4:37293486-37293505 | MS.gene23337:intron | 5.0% |
| AAGGATGAGTTTGGCCCAAC+CGG | - | chr4.4:37289617-37289636 | MS.gene23337:intron | 50.0% | |
| ACCTGATCAGATGGTCATCC+AGG | - | chr4.4:37291285-37291304 | MS.gene23337:intron | 50.0% | |
| ACGGCCGAAATACCACTTGT+TGG | + | chr4.4:37288463-37288482 | None:intergenic | 50.0% | |
| AGCAACAGCCAAAGCCTTCA+GGG | + | chr4.4:37290050-37290069 | None:intergenic | 50.0% | |
| AGGTAAGCGGCGGTTTGAAT+GGG | + | chr4.4:37287340-37287359 | None:intergenic | 50.0% | |
| AGTAAGGTGGCGTGCTTTGT+TGG | - | chr4.4:37288540-37288559 | MS.gene23337:intron | 50.0% | |
| ATACCAGCAATGTTCCCTCC+AGG | + | chr4.4:37291534-37291553 | None:intergenic | 50.0% | |
| ATCGCCCTTGTCTACATTGC+GGG | - | chr4.4:37291348-37291367 | MS.gene23337:intron | 50.0% | |
| ATGTTCACTGTTCAGGGTGG+TGG | + | chr4.4:37292993-37293012 | None:intergenic | 50.0% | |
| CCCAACAATGACAAAAGCGG+AGG | - | chr4.4:37288656-37288675 | MS.gene23337:intron | 50.0% | |
| CGAAGCAGATATGGTCTGCA+AGG | - | chr4.4:37292508-37292527 | MS.gene23337:intron | 50.0% | |
| CTATGCTTGTCCCATCACCT+TGG | - | chr4.4:37294003-37294022 | MS.gene23337:CDS | 50.0% | |
| CTGAAAGCCAAGACCAACCA+AGG | - | chr4.4:37293229-37293248 | MS.gene23337:intron | 50.0% | |
| GACAGAAATTCCTTCCCCGA+AGG | + | chr4.4:37290508-37290527 | None:intergenic | 50.0% | |
| GAGCCAGACTCTAATCGAGA+AGG | - | chr4.4:37290456-37290475 | MS.gene23337:intron | 50.0% | |
| GATATGGTCTGCAAGGCTGT+TGG | - | chr4.4:37292515-37292534 | MS.gene23337:intron | 50.0% | |
| GGCGGTTTGAATGGGAAATG+AGG | + | chr4.4:37287332-37287351 | None:intergenic | 50.0% | |
| GGTTATCGAGGTGAAGAGTG+TGG | + | chr4.4:37287305-37287324 | None:intergenic | 50.0% | |
| GTCCAAGTCTCTCGAATCCT+TGG | + | chr4.4:37291916-37291935 | None:intergenic | 50.0% | |
| GTGGTGACACCTGCAACTAT+CGG | - | chr4.4:37291508-37291527 | MS.gene23337:intron | 50.0% | |
| GTTCAGGCCATACTCATCCA+AGG | + | chr4.4:37289550-37289569 | None:intergenic | 50.0% | |
| TAGCAACAGCCAAAGCCTTC+AGG | + | chr4.4:37290051-37290070 | None:intergenic | 50.0% | |
| TCCTGGATGACCATCTGATC+AGG | + | chr4.4:37291289-37291308 | None:intergenic | 50.0% | |
| TGATCAGATGGTCATCCAGG+AGG | - | chr4.4:37291288-37291307 | MS.gene23337:intron | 50.0% | |
| TGTTCACTGTTCAGGGTGGT+GGG | + | chr4.4:37292992-37293011 | None:intergenic | 50.0% | |
| TTGGAGCTGGGAAGAGAAAG+GGG | + | chr4.4:37293926-37293945 | None:intergenic | 50.0% | |
| ! | CTCTTGGCTTTCAGCTTCAG+TGG | + | chr4.4:37293197-37293216 | None:intergenic | 50.0% |
| ! | GATTGGTTGCTCAGAGTGCA+AGG | - | chr4.4:37289482-37289501 | MS.gene23337:intron | 50.0% |
| ! | GCCCAGTTGTGTCCCTTTTA+TGG | - | chr4.4:37288993-37289012 | MS.gene23337:intron | 50.0% |
| ! | GGTGCCTGTGTTGGTATTGA+TGG | + | chr4.4:37293838-37293857 | None:intergenic | 50.0% |
| ! | GTTTGTGGAATGGATGGTGG+TGG | + | chr4.4:37287385-37287404 | None:intergenic | 50.0% |
| !! | CTGGACCTGCTATTGGTCTT+TGG | - | chr4.4:37287607-37287626 | MS.gene23337:intron | 50.0% |
| !! | GCGTTGGTTTGTGGAATGGA+TGG | + | chr4.4:37287391-37287410 | None:intergenic | 50.0% |
| !! | GGTGGTGGTGTTGTTGAGAA+GGG | + | chr4.4:37287370-37287389 | None:intergenic | 50.0% |
| !! | GTTAGACCCTTGGTTGGTCT+TGG | + | chr4.4:37293239-37293258 | None:intergenic | 50.0% |
| !! | GTTGATGACTGAACTCTGGG+TGG | + | chr4.4:37293859-37293878 | None:intergenic | 50.0% |
| !! | TGGTGGTGGTGTTGTTGAGA+AGG | + | chr4.4:37287371-37287390 | None:intergenic | 50.0% |
| !! | TTGGTATTGATGGCTTCGGG+TGG | + | chr4.4:37293828-37293847 | None:intergenic | 50.0% |
| !! | TTTGCTTTTGCAGGCTGGAC+GGG | - | chr4.4:37292335-37292354 | MS.gene23337:CDS | 50.0% |
| !!! | GGCTGTTGGTTTTCCCTTGT+TGG | - | chr4.4:37292529-37292548 | MS.gene23337:intron | 50.0% |
| !!! | GGGCTGCTTTTTGGGATAGT+TGG | - | chr4.4:37291226-37291245 | MS.gene23337:CDS | 50.0% |
| CAGGCCATACTCATCCAAGG+TGG | + | chr4.4:37289547-37289566 | None:intergenic | 55.0% | |
| CCTCACCTTACAAGCCGGTT+GGG | + | chr4.4:37289634-37289653 | None:intergenic | 55.0% | |
| CTTCCCCGAAGGAATGGAGA+AGG | + | chr4.4:37290497-37290516 | None:intergenic | 55.0% | |
| CTTCTCCATTCCTTCGGGGA+AGG | - | chr4.4:37290495-37290514 | MS.gene23337:intron | 55.0% | |
| GACAGGCTAGGTCGCTTCTA+AGG | - | chr4.4:37291176-37291195 | MS.gene23337:CDS | 55.0% | |
| GAGGTAAGCGGCGGTTTGAA+TGG | + | chr4.4:37287341-37287360 | None:intergenic | 55.0% | |
| GCAACAGCCAAAGCCTTCAG+GGG | + | chr4.4:37290049-37290068 | None:intergenic | 55.0% | |
| GGGAATGAAGAGGTAAGCGG+CGG | + | chr4.4:37287350-37287369 | None:intergenic | 55.0% | |
| GTGTTAGGAACCCGAAGCGA+CGG | + | chr4.4:37287437-37287456 | None:intergenic | 55.0% | |
| TCCTCACCTTACAAGCCGGT+TGG | + | chr4.4:37289635-37289654 | None:intergenic | 55.0% | |
| TCGCCCTTGTCTACATTGCG+GGG | - | chr4.4:37291349-37291368 | MS.gene23337:intron | 55.0% | |
| TGCCCCCGCAATGTAGACAA+GGG | + | chr4.4:37291355-37291374 | None:intergenic | 55.0% | |
| ! | AGGTGGCGTGCTTTGTTGGA+TGG | - | chr4.4:37288544-37288563 | MS.gene23337:intron | 55.0% |
| ! | GGGAGATAGAAGGCGCAGAA+GGG | + | chr4.4:37292664-37292683 | None:intergenic | 55.0% |
| ! | GTATTGATGGCTTCGGGTGG+TGG | + | chr4.4:37293825-37293844 | None:intergenic | 55.0% |
| ! | TGGGAGATAGAAGGCGCAGA+AGG | + | chr4.4:37292665-37292684 | None:intergenic | 55.0% |
| !! | TTTGGCCCAACCGGCTTGTA+AGG | - | chr4.4:37289626-37289645 | MS.gene23337:intron | 55.0% |
| ACCTGCAACTATCGGCCTGG+AGG | - | chr4.4:37291516-37291535 | MS.gene23337:intron | 60.0% | |
| ACTCTGGGTGGTGCCTGTGT+TGG | + | chr4.4:37293847-37293866 | None:intergenic | 60.0% | |
| AGACTCTTGGGGACCCCTGA+AGG | - | chr4.4:37290033-37290052 | MS.gene23337:CDS | 60.0% | |
| ATGGGATTGCTGGGGCTGCT+TGG | - | chr4.4:37290119-37290138 | MS.gene23337:intron | 60.0% | |
| CCTGCAACTATCGGCCTGGA+GGG | - | chr4.4:37291517-37291536 | MS.gene23337:intron | 60.0% | |
| CGCCCTTGTCTACATTGCGG+GGG | - | chr4.4:37291350-37291369 | MS.gene23337:intron | 60.0% | |
| CTGCCCCCGCAATGTAGACA+AGG | + | chr4.4:37291356-37291375 | None:intergenic | 60.0% | |
| CTGCGCCTTCTATCTCCCAG+TGG | - | chr4.4:37292666-37292685 | MS.gene23337:intron | 60.0% | |
| CTTGTCTACATTGCGGGGGC+AGG | - | chr4.4:37291354-37291373 | MS.gene23337:intron | 60.0% | |
| GACACCTGCAACTATCGGCC+TGG | - | chr4.4:37291513-37291532 | MS.gene23337:intron | 60.0% | |
| TGCGGGGGCAGGATAACCAA+TGG | - | chr4.4:37291365-37291384 | MS.gene23337:intron | 60.0% | |
| TGGGATTGCTGGGGCTGCTT+GGG | - | chr4.4:37290120-37290139 | MS.gene23337:intron | 60.0% | |
| TGGGGCTGCTTGGGCTACAT+TGG | - | chr4.4:37290129-37290148 | MS.gene23337:intron | 60.0% | |
| TTGGGGACCCCTGAAGGCTT+TGG | - | chr4.4:37290039-37290058 | MS.gene23337:CDS | 60.0% | |
| ! | TTTGGTGCGACAACGCTCGC+AGG | - | chr4.4:37288951-37288970 | MS.gene23337:intron | 60.0% |
| !! | CCCAACCGGCTTGTAAGGTG+AGG | - | chr4.4:37289631-37289650 | MS.gene23337:intron | 60.0% |
| CCCTCCAGGCCGATAGTTGC+AGG | + | chr4.4:37291520-37291539 | None:intergenic | 65.0% | |
| CGGCCTGGAGGGAACATTGC+TGG | - | chr4.4:37291528-37291547 | MS.gene23337:intron | 65.0% | |
| GGAACCCGAAGCGACGGTTC+CGG | + | chr4.4:37287431-37287450 | None:intergenic | 65.0% | |
| TCGAGCCGGAACCGTCGCTT+CGG | - | chr4.4:37287423-37287442 | MS.gene23337:CDS | 65.0% | |
| ! | TTCGGGTGGTGGCTAGCTGG+CGG | + | chr4.4:37293814-37293833 | None:intergenic | 65.0% |
| CGAGCCGGAACCGTCGCTTC+GGG | - | chr4.4:37287424-37287443 | MS.gene23337:CDS | 70.0% | |
| ! | GAAGCGACGGTTCCGGCTCG+AGG | + | chr4.4:37287424-37287443 | None:intergenic | 70.0% |
| ! | GGCTTCGGGTGGTGGCTAGC+TGG | + | chr4.4:37293817-37293836 | None:intergenic | 70.0% |
| ! | GTGGCTAGCTGGCGGCGAGT+AGG | + | chr4.4:37293806-37293825 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37287270 | 37294030 | 37287270 | ID=MS.gene23337 |
| chr4.4 | mRNA | 37287270 | 37294030 | 37287270 | ID=MS.gene23337.t1;Parent=MS.gene23337 |
| chr4.4 | exon | 37293595 | 37294030 | 37293595 | ID=MS.gene23337.t1.exon1;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37293595 | 37294030 | 37293595 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37293402 | 37293496 | 37293402 | ID=MS.gene23337.t1.exon2;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37293402 | 37293496 | 37293402 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37292328 | 37292436 | 37292328 | ID=MS.gene23337.t1.exon3;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37292328 | 37292436 | 37292328 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37292148 | 37292203 | 37292148 | ID=MS.gene23337.t1.exon4;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37292148 | 37292203 | 37292148 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37291797 | 37291852 | 37291797 | ID=MS.gene23337.t1.exon5;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37291797 | 37291852 | 37291797 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37291141 | 37291279 | 37291141 | ID=MS.gene23337.t1.exon6;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37291141 | 37291279 | 37291141 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37290727 | 37290864 | 37290727 | ID=MS.gene23337.t1.exon7;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37290727 | 37290864 | 37290727 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37290573 | 37290641 | 37290573 | ID=MS.gene23337.t1.exon8;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37290573 | 37290641 | 37290573 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37290356 | 37290466 | 37290356 | ID=MS.gene23337.t1.exon9;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37290356 | 37290466 | 37290356 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37289991 | 37290119 | 37289991 | ID=MS.gene23337.t1.exon10;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37289991 | 37290119 | 37289991 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37289751 | 37289828 | 37289751 | ID=MS.gene23337.t1.exon11;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37289751 | 37289828 | 37289751 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37288881 | 37288952 | 37288881 | ID=MS.gene23337.t1.exon12;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37288881 | 37288952 | 37288881 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37288739 | 37288798 | 37288739 | ID=MS.gene23337.t1.exon13;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37288739 | 37288798 | 37288739 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37288585 | 37288655 | 37288585 | ID=MS.gene23337.t1.exon14;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37288585 | 37288655 | 37288585 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| chr4.4 | exon | 37287270 | 37287561 | 37287270 | ID=MS.gene23337.t1.exon15;Parent=MS.gene23337.t1 |
| chr4.4 | CDS | 37287270 | 37287561 | 37287270 | ID=cds.MS.gene23337.t1;Parent=MS.gene23337.t1 |
| Gene Sequence |
| Protein sequence |
