Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26874.t1 | XP_018459315.1 | 46.8 | 340 | 156 | 6 | 1 | 338 | 1 | 317 | 7.00E-66 | 261.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26874.t1 | A0A2N9I863 | 41.8 | 354 | 172 | 8 | 1 | 339 | 1 | 335 | 2.6e-62 | 248.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene26874 | 0.838046 | 3.63E-57 | -1.69E-46 |
| MS.gene049669 | MS.gene26874 | 0.808602 | 2.86E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene26874 | 0.808821 | 2.57E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene26874 | 0.829427 | 5.18E-55 | -1.69E-46 |
| MS.gene050228 | MS.gene26874 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene26874 | 0.807494 | 4.92E-50 | -1.69E-46 |
| MS.gene050623 | MS.gene26874 | -0.806011 | 1.01E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene26874 | 0.80284 | 4.63E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene26874 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene050780 | MS.gene26874 | 0.802456 | 5.56E-49 | -1.69E-46 |
| MS.gene054468 | MS.gene26874 | 0.803866 | 2.84E-49 | -1.69E-46 |
| MS.gene05468 | MS.gene26874 | 0.820337 | 7.23E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene26874 | 0.827812 | 1.27E-54 | -1.69E-46 |
| MS.gene055926 | MS.gene26874 | 0.802791 | 4.75E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene26874 | 0.801688 | 8.00E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene26874 | 0.826172 | 3.14E-54 | -1.69E-46 |
| MS.gene05761 | MS.gene26874 | 0.819566 | 1.09E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene26874 | 0.80063 | 1.32E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene26874 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene060685 | MS.gene26874 | 0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene26874 | 0.808645 | 2.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26874.t1 | MTR_7g062720 | 40.541 | 148 | 80 | 3 | 1 | 146 | 1 | 142 | 5.04e-31 | 115 |
| MS.gene26874.t1 | MTR_4g037355 | 40.441 | 136 | 61 | 4 | 155 | 290 | 1 | 116 | 1.14e-21 | 89.7 |
| MS.gene26874.t1 | MTR_5g061150 | 35.354 | 99 | 64 | 0 | 52 | 150 | 38 | 136 | 4.24e-18 | 80.1 |
| MS.gene26874.t1 | MTR_4g112730 | 57.971 | 69 | 28 | 1 | 143 | 211 | 2 | 69 | 8.40e-18 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 60 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATCAATGGAACAAATTA+AGG | 0.196151 | 1.4:-80091847 | MS.gene26874:CDS |
| AGTCTTATTGCCCTCATTAA+TGG | 0.201947 | 1.4:-80091867 | MS.gene26874:CDS |
| AAAGTTGTGGCGTTTATTTC+AGG | 0.203868 | 1.4:+80091551 | None:intergenic |
| CAAAAGATCCCAAGATCTTA+TGG | 0.237847 | 1.4:-80091925 | MS.gene26874:CDS |
| GATTCTTGAGGGAGAAGATT+TGG | 0.253340 | 1.4:-80092044 | MS.gene26874:CDS |
| GACAAAATTAAGGCAAGATT+TGG | 0.257188 | 1.4:-80091902 | MS.gene26874:CDS |
| CTCAATTAAGTTGTTGTTCC+AGG | 0.274617 | 1.4:+80092093 | None:intergenic |
| CACGACCTCCACCACGAAAA+TGG | 0.277262 | 1.4:+80091435 | None:intergenic |
| GATCTTATGGGACAAAATTA+AGG | 0.310971 | 1.4:-80091912 | MS.gene26874:CDS |
| ATTTACTGAATACTCTGATT+TGG | 0.313227 | 1.4:-80091657 | MS.gene26874:CDS |
| ATTCTTGAGGGAGAAGATTT+GGG | 0.333151 | 1.4:-80092043 | MS.gene26874:CDS |
| AGACAGGTAGTGTCATTCTT+TGG | 0.342502 | 1.4:+80091179 | None:intergenic |
| GGGAGATGTCCCAGAGGAAT+TGG | 0.345733 | 1.4:-80092023 | MS.gene26874:CDS |
| GAAGAGGTTATATGAATTAC+AGG | 0.363099 | 1.4:-80091412 | MS.gene26874:CDS |
| GATTTCTAGAGGGACCTTCC+TGG | 0.373636 | 1.4:+80091336 | None:intergenic |
| CATAGCCACCACGTCCTCTT+TGG | 0.374275 | 1.4:+80091501 | None:intergenic |
| CGTGGTGGCTATGCTCGTTT+TGG | 0.395091 | 1.4:-80091491 | MS.gene26874:CDS |
| ACAAAATTAAGGCAAGATTT+GGG | 0.416566 | 1.4:-80091901 | MS.gene26874:CDS |
| TATAACTGAAAAGGAAAAGT+TGG | 0.422757 | 1.4:-80091744 | MS.gene26874:CDS |
| TGCCCTCATTAATGGATCAA+TGG | 0.432677 | 1.4:-80091859 | MS.gene26874:CDS |
| CGTGGTGGAGGTCGTGGAAG+AGG | 0.449888 | 1.4:-80091428 | MS.gene26874:CDS |
| AAAAGATCCCAAGATCTTAT+GGG | 0.458748 | 1.4:-80091924 | MS.gene26874:CDS |
| AACCATCAGTTGCGTCCTAC+AGG | 0.459311 | 1.4:-80091587 | MS.gene26874:CDS |
| TGGCAAAACTATAACTGAAA+AGG | 0.467052 | 1.4:-80091753 | MS.gene26874:CDS |
| ATCTGTGGATGGAAAGGAAA+GGG | 0.491819 | 1.4:-80091225 | MS.gene26874:CDS |
| ATCAAGCACCACATTGATGA+TGG | 0.492315 | 1.4:-80091971 | MS.gene26874:CDS |
| TGTTATAGATGCGGAAAGAA+AGG | 0.495634 | 1.4:-80091302 | MS.gene26874:CDS |
| CTGGCGACAACTACATAACC+TGG | 0.502097 | 1.4:-80092111 | MS.gene26874:CDS |
| GTTCCATTGATCCATTAATG+AGG | 0.509644 | 1.4:+80091856 | None:intergenic |
| ATGCGGAAAGAAAGGCCATT+GGG | 0.516896 | 1.4:-80091294 | MS.gene26874:CDS |
| TTTGATTGGTCATATTTGAG+AGG | 0.522357 | 1.4:+80091389 | None:intergenic |
| CAAAGAATCTGTGGATGGAA+AGG | 0.532926 | 1.4:-80091231 | MS.gene26874:CDS |
| TTCCATTGATCCATTAATGA+GGG | 0.533283 | 1.4:+80091857 | None:intergenic |
| CGTGGACGAGGTAGAAATCA+TGG | 0.535808 | 1.4:-80091464 | MS.gene26874:CDS |
| GGACTCGATAAGATTCTTGA+GGG | 0.539399 | 1.4:-80092055 | MS.gene26874:CDS |
| CCCTCTAGAAATCATGATGA+TGG | 0.541875 | 1.4:-80091326 | MS.gene26874:CDS |
| TTCCTGTAGGACGCAACTGA+TGG | 0.562606 | 1.4:+80091585 | None:intergenic |
| AAAATCAGCAGCCTCAAGAC+AGG | 0.562896 | 1.4:+80091163 | None:intergenic |
| AATTGAGTATCTTGCATGTG+AGG | 0.565013 | 1.4:-80092077 | MS.gene26874:CDS |
| GCCATTGGGCTAAAACATGC+AGG | 0.566864 | 1.4:-80091280 | MS.gene26874:CDS |
| ATTGAGTATCTTGCATGTGA+GGG | 0.575966 | 1.4:-80092076 | MS.gene26874:CDS |
| TTTGGTTGCAGCCCTTCTAG+TGG | 0.582793 | 1.4:-80091639 | MS.gene26874:CDS |
| GATGCGGAAAGAAAGGCCAT+TGG | 0.583841 | 1.4:-80091295 | MS.gene26874:CDS |
| TTGTGCAATAATTTGATGCA+TGG | 0.588693 | 1.4:+80091787 | None:intergenic |
| TAAAAGATACAAAGAATCTG+TGG | 0.594054 | 1.4:-80091240 | MS.gene26874:CDS |
| AGATACAAAGAATCTGTGGA+TGG | 0.602731 | 1.4:-80091236 | MS.gene26874:CDS |
| GGGACTCGATAAGATTCTTG+AGG | 0.606176 | 1.4:-80092056 | MS.gene26874:CDS |
| ACGCCCTTGATTAAAAGTTG+TGG | 0.608515 | 1.4:+80091538 | None:intergenic |
| GCAATATCACTTGAGATGCA+TGG | 0.608661 | 1.4:+80091702 | None:intergenic |
| TATAATCGCCAAAGAGGACG+TGG | 0.608957 | 1.4:-80091509 | MS.gene26874:CDS |
| ACCATCATCATGATTTCTAG+AGG | 0.616492 | 1.4:+80091325 | None:intergenic |
| GGATACGACATTGTTCCTGT+AGG | 0.627452 | 1.4:+80091572 | None:intergenic |
| GGTGGTTATAATCGCCAAAG+AGG | 0.642086 | 1.4:-80091515 | MS.gene26874:CDS |
| CCATCATCATGATTTCTAGA+GGG | 0.647682 | 1.4:+80091326 | None:intergenic |
| GAATGACACTACCTGTCTTG+AGG | 0.649563 | 1.4:-80091174 | MS.gene26874:CDS |
| AATCTGTGGATGGAAAGGAA+AGG | 0.653361 | 1.4:-80091226 | MS.gene26874:CDS |
| GATGATGGTTGTTATAGATG+CGG | 0.696569 | 1.4:-80091311 | MS.gene26874:CDS |
| AATCGCCAAAGAGGACGTGG+TGG | 0.698905 | 1.4:-80091506 | MS.gene26874:CDS |
| TTTGTAATCCATCATCAATG+TGG | 0.715751 | 1.4:+80091963 | None:intergenic |
| AGATTTGGGAGATGTCCCAG+AGG | 0.741186 | 1.4:-80092029 | MS.gene26874:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCAAAATTTTAAGCATAAC+TGG | - | chr1.4:80091157-80091176 | MS.gene26874:CDS | 20.0% |
| ! | ACAAAATTAAGGCAAGATTT+GGG | - | chr1.4:80091386-80091405 | MS.gene26874:CDS | 25.0% |
| ! | ATTTACTGAATACTCTGATT+TGG | - | chr1.4:80091630-80091649 | MS.gene26874:CDS | 25.0% |
| ! | CAATCAAACAAAAATCATCA+GGG | - | chr1.4:80091913-80091932 | MS.gene26874:CDS | 25.0% |
| ! | TAAAAGATACAAAGAATCTG+TGG | - | chr1.4:80092047-80092066 | MS.gene26874:CDS | 25.0% |
| ! | TATAACTGAAAAGGAAAAGT+TGG | - | chr1.4:80091543-80091562 | MS.gene26874:CDS | 25.0% |
| !! | ATTGCACAATTAGAATTTTG+TGG | - | chr1.4:80091514-80091533 | MS.gene26874:CDS | 25.0% |
| !! | TATCTTTTACATAGATACTC+TGG | + | chr1.4:80092036-80092055 | None:intergenic | 25.0% |
| !!! | CAACAACAGTTTTATAATCT+TGG | + | chr1.4:80091468-80091487 | None:intergenic | 25.0% |
| !!! | TGTTGAAGGAGATTTTAATA+TGG | - | chr1.4:80092146-80092165 | MS.gene26874:CDS | 25.0% |
| AAAAGATCCCAAGATCTTAT+GGG | - | chr1.4:80091363-80091382 | MS.gene26874:CDS | 30.0% | |
| AACAAAAATCATCAGGGTAA+AGG | - | chr1.4:80091919-80091938 | MS.gene26874:CDS | 30.0% | |
| CCAATCAAACAAAAATCATC+AGG | - | chr1.4:80091912-80091931 | MS.gene26874:CDS | 30.0% | |
| GAAGAGGTTATATGAATTAC+AGG | - | chr1.4:80091875-80091894 | MS.gene26874:CDS | 30.0% | |
| GACAAAATTAAGGCAAGATT+TGG | - | chr1.4:80091385-80091404 | MS.gene26874:CDS | 30.0% | |
| GATCTTATGGGACAAAATTA+AGG | - | chr1.4:80091375-80091394 | MS.gene26874:CDS | 30.0% | |
| TGGATCAATGGAACAAATTA+AGG | - | chr1.4:80091440-80091459 | MS.gene26874:CDS | 30.0% | |
| TGGCAAAACTATAACTGAAA+AGG | - | chr1.4:80091534-80091553 | MS.gene26874:CDS | 30.0% | |
| TTCCATTGATCCATTAATGA+GGG | + | chr1.4:80091433-80091452 | None:intergenic | 30.0% | |
| TTGTGCAATAATTTGATGCA+TGG | + | chr1.4:80091503-80091522 | None:intergenic | 30.0% | |
| TTTGTAATCCATCATCAATG+TGG | + | chr1.4:80091327-80091346 | None:intergenic | 30.0% | |
| ! | AATTTTGTCCCATAAGATCT+TGG | + | chr1.4:80091374-80091393 | None:intergenic | 30.0% |
| ! | ATTTTGTCCCATAAGATCTT+GGG | + | chr1.4:80091373-80091392 | None:intergenic | 30.0% |
| ! | TTTGATTGGTCATATTTGAG+AGG | + | chr1.4:80091901-80091920 | None:intergenic | 30.0% |
| !! | CCTGATGATTTTTGTTTGAT+TGG | + | chr1.4:80091915-80091934 | None:intergenic | 30.0% |
| AAAGGTAAAAACATCCAGGA+AGG | - | chr1.4:80091937-80091956 | MS.gene26874:CDS | 35.0% | |
| AAAGTTGTGGCGTTTATTTC+AGG | + | chr1.4:80091739-80091758 | None:intergenic | 35.0% | |
| AATTGAGTATCTTGCATGTG+AGG | - | chr1.4:80091210-80091229 | MS.gene26874:CDS | 35.0% | |
| AGATACAAAGAATCTGTGGA+TGG | - | chr1.4:80092051-80092070 | MS.gene26874:CDS | 35.0% | |
| ATTCTTGAGGGAGAAGATTT+GGG | - | chr1.4:80091244-80091263 | MS.gene26874:CDS | 35.0% | |
| ATTGAGTATCTTGCATGTGA+GGG | - | chr1.4:80091211-80091230 | MS.gene26874:CDS | 35.0% | |
| CAAAAGATCCCAAGATCTTA+TGG | - | chr1.4:80091362-80091381 | MS.gene26874:CDS | 35.0% | |
| GTTCCATTGATCCATTAATG+AGG | + | chr1.4:80091434-80091453 | None:intergenic | 35.0% | |
| TGTTATAGATGCGGAAAGAA+AGG | - | chr1.4:80091985-80092004 | MS.gene26874:CDS | 35.0% | |
| ! | AACGCCACAACTTTTAATCA+AGG | - | chr1.4:80091745-80091764 | MS.gene26874:CDS | 35.0% |
| ! | ACCATCATCATGATTTCTAG+AGG | + | chr1.4:80091965-80091984 | None:intergenic | 35.0% |
| ! | ACGCCACAACTTTTAATCAA+GGG | - | chr1.4:80091746-80091765 | MS.gene26874:CDS | 35.0% |
| ! | ATTTTGTTCAGCCACTAGAA+GGG | + | chr1.4:80091662-80091681 | None:intergenic | 35.0% |
| ! | CCATCATCATGATTTCTAGA+GGG | + | chr1.4:80091964-80091983 | None:intergenic | 35.0% |
| ! | CTCAATTAAGTTGTTGTTCC+AGG | + | chr1.4:80091197-80091216 | None:intergenic | 35.0% |
| ! | GATGATGGTTGTTATAGATG+CGG | - | chr1.4:80091976-80091995 | MS.gene26874:CDS | 35.0% |
| ! | TATTTTGTTCAGCCACTAGA+AGG | + | chr1.4:80091663-80091682 | None:intergenic | 35.0% |
| ! | TTTTCTTTGCCAATTCCTCT+GGG | + | chr1.4:80091276-80091295 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGCCAATTCCTC+TGG | + | chr1.4:80091277-80091296 | None:intergenic | 35.0% |
| !! | AGTCTTATTGCCCTCATTAA+TGG | - | chr1.4:80091420-80091439 | MS.gene26874:CDS | 35.0% |
| AATCTGTGGATGGAAAGGAA+AGG | - | chr1.4:80092061-80092080 | MS.gene26874:CDS | 40.0% | |
| ACGCCCTTGATTAAAAGTTG+TGG | + | chr1.4:80091752-80091771 | None:intergenic | 40.0% | |
| ATCAAGCACCACATTGATGA+TGG | - | chr1.4:80091316-80091335 | MS.gene26874:CDS | 40.0% | |
| ATCTGTGGATGGAAAGGAAA+GGG | - | chr1.4:80092062-80092081 | MS.gene26874:CDS | 40.0% | |
| CAAAGAATCTGTGGATGGAA+AGG | - | chr1.4:80092056-80092075 | MS.gene26874:CDS | 40.0% | |
| GATTCTTGAGGGAGAAGATT+TGG | - | chr1.4:80091243-80091262 | MS.gene26874:CDS | 40.0% | |
| GCAATATCACTTGAGATGCA+TGG | + | chr1.4:80091588-80091607 | None:intergenic | 40.0% | |
| GGACTCGATAAGATTCTTGA+GGG | - | chr1.4:80091232-80091251 | MS.gene26874:CDS | 40.0% | |
| GGGTAAAGGTAAAAACATCC+AGG | - | chr1.4:80091933-80091952 | MS.gene26874:CDS | 40.0% | |
| ! | ACAACTTTTAATCAAGGGCG+TGG | - | chr1.4:80091751-80091770 | MS.gene26874:CDS | 40.0% |
| ! | AGACAGGTAGTGTCATTCTT+TGG | + | chr1.4:80092111-80092130 | None:intergenic | 40.0% |
| ! | CCCTCTAGAAATCATGATGA+TGG | - | chr1.4:80091961-80091980 | MS.gene26874:CDS | 40.0% |
| ! | TGCCCTCATTAATGGATCAA+TGG | - | chr1.4:80091428-80091447 | MS.gene26874:CDS | 40.0% |
| AAAATCAGCAGCCTCAAGAC+AGG | + | chr1.4:80092127-80092146 | None:intergenic | 45.0% | |
| ATGCGGAAAGAAAGGCCATT+GGG | - | chr1.4:80091993-80092012 | MS.gene26874:CDS | 45.0% | |
| GAATGACACTACCTGTCTTG+AGG | - | chr1.4:80092113-80092132 | MS.gene26874:CDS | 45.0% | |
| GGATACGACATTGTTCCTGT+AGG | + | chr1.4:80091718-80091737 | None:intergenic | 45.0% | |
| GGGACTCGATAAGATTCTTG+AGG | - | chr1.4:80091231-80091250 | MS.gene26874:CDS | 45.0% | |
| GGTGGTTATAATCGCCAAAG+AGG | - | chr1.4:80091772-80091791 | MS.gene26874:CDS | 45.0% | |
| TATAATCGCCAAAGAGGACG+TGG | - | chr1.4:80091778-80091797 | MS.gene26874:CDS | 45.0% | |
| ! | CATGGTCGAAACCATTTTCG+TGG | - | chr1.4:80091841-80091860 | MS.gene26874:CDS | 45.0% |
| !! | ACTTTTAATCAAGGGCGTGG+TGG | - | chr1.4:80091754-80091773 | MS.gene26874:CDS | 45.0% |
| !!! | GAGGCTGCTGATTTTGTTGA+AGG | - | chr1.4:80092132-80092151 | MS.gene26874:CDS | 45.0% |
| !!! | TCCTGCATGTTTTAGCCCAA+TGG | + | chr1.4:80092011-80092030 | None:intergenic | 45.0% |
| AACCATCAGTTGCGTCCTAC+AGG | - | chr1.4:80091700-80091719 | MS.gene26874:CDS | 50.0% | |
| AGATTTGGGAGATGTCCCAG+AGG | - | chr1.4:80091258-80091277 | MS.gene26874:CDS | 50.0% | |
| CGTGGACGAGGTAGAAATCA+TGG | - | chr1.4:80091823-80091842 | MS.gene26874:CDS | 50.0% | |
| CTGGCGACAACTACATAACC+TGG | - | chr1.4:80091176-80091195 | MS.gene26874:CDS | 50.0% | |
| GATGCGGAAAGAAAGGCCAT+TGG | - | chr1.4:80091992-80092011 | MS.gene26874:CDS | 50.0% | |
| GCCATTGGGCTAAAACATGC+AGG | - | chr1.4:80092007-80092026 | MS.gene26874:CDS | 50.0% | |
| TTCCTGTAGGACGCAACTGA+TGG | + | chr1.4:80091705-80091724 | None:intergenic | 50.0% | |
| TTTGGTTGCAGCCCTTCTAG+TGG | - | chr1.4:80091648-80091667 | MS.gene26874:CDS | 50.0% | |
| ! | CGAAACCATTTTCGTGGTGG+AGG | - | chr1.4:80091847-80091866 | MS.gene26874:CDS | 50.0% |
| ! | GATTTCTAGAGGGACCTTCC+TGG | + | chr1.4:80091954-80091973 | None:intergenic | 50.0% |
| ! | GGTCGAAACCATTTTCGTGG+TGG | - | chr1.4:80091844-80091863 | MS.gene26874:CDS | 50.0% |
| !! | TATGCTCGTTTTGGTGGTCG+TGG | - | chr1.4:80091805-80091824 | MS.gene26874:CDS | 50.0% |
| AATCGCCAAAGAGGACGTGG+TGG | - | chr1.4:80091781-80091800 | MS.gene26874:CDS | 55.0% | |
| CACGACCTCCACCACGAAAA+TGG | + | chr1.4:80091855-80091874 | None:intergenic | 55.0% | |
| CATAGCCACCACGTCCTCTT+TGG | + | chr1.4:80091789-80091808 | None:intergenic | 55.0% | |
| GGGAGATGTCCCAGAGGAAT+TGG | - | chr1.4:80091264-80091283 | MS.gene26874:CDS | 55.0% | |
| ! | CGTGGTGGCTATGCTCGTTT+TGG | - | chr1.4:80091796-80091815 | MS.gene26874:CDS | 55.0% |
| ! | GGTGGCTATGCTCGTTTTGG+TGG | - | chr1.4:80091799-80091818 | MS.gene26874:CDS | 55.0% |
| !! | CATTTTCGTGGTGGAGGTCG+TGG | - | chr1.4:80091853-80091872 | MS.gene26874:CDS | 55.0% |
| !! | CGTTTTGGTGGTCGTGGACG+AGG | - | chr1.4:80091811-80091830 | MS.gene26874:CDS | 60.0% |
| ! | CGTGGTGGAGGTCGTGGAAG+AGG | - | chr1.4:80091859-80091878 | MS.gene26874:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 80091136 | 80092173 | 80091136 | ID=MS.gene26874 |
| chr1.4 | mRNA | 80091136 | 80092173 | 80091136 | ID=MS.gene26874.t1;Parent=MS.gene26874 |
| chr1.4 | exon | 80091136 | 80092173 | 80091136 | ID=MS.gene26874.t1.exon1;Parent=MS.gene26874.t1 |
| chr1.4 | CDS | 80091136 | 80092173 | 80091136 | ID=cds.MS.gene26874.t1;Parent=MS.gene26874.t1 |
| Gene Sequence |
| Protein sequence |
