Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30307.t1 | XP_013444418.1 | 97.3 | 548 | 10 | 4 | 1 | 548 | 1 | 543 | 4.40E-304 | 1053.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30307.t1 | Q9ZS97 | 75.8 | 554 | 128 | 2 | 1 | 548 | 1 | 554 | 2.6e-244 | 846.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30307.t1 | A0A072TNQ0 | 97.3 | 548 | 10 | 4 | 1 | 548 | 1 | 543 | 3.2e-304 | 1053.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene30307 | 0.819708 | 1.01E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene30307 | 0.826718 | 2.33E-54 | -1.69E-46 |
| MS.gene049488 | MS.gene30307 | 0.833655 | 4.71E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene30307 | 0.801798 | 7.59E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene30307 | 0.808821 | 2.57E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene30307 | 0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene30307 | 0.829845 | 4.10E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene30307 | 0.83626 | 1.04E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene30307 | 0.816367 | 5.74E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene30307 | 0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene30307 | 0.802142 | 6.46E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene30307 | 0.805857 | 1.09E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene30307 | 0.83005 | 3.65E-55 | -1.69E-46 |
| MS.gene053873 | MS.gene30307 | 0.804711 | 1.89E-49 | -1.69E-46 |
| MS.gene053912 | MS.gene30307 | 0.84086 | 6.74E-58 | -1.69E-46 |
| MS.gene055539 | MS.gene30307 | 0.832398 | 9.67E-56 | -1.69E-46 |
| MS.gene055741 | MS.gene30307 | 0.826996 | 2.00E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene30307 | 0.82702 | 1.97E-54 | -1.69E-46 |
| MS.gene055909 | MS.gene30307 | 0.810693 | 1.02E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene30307 | 0.814 | 1.93E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene30307 | 0.817568 | 3.08E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene30307 | 0.801239 | 9.89E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene30307 | 0.848941 | 4.44E-60 | -1.69E-46 |
| MS.gene05666 | MS.gene30307 | 0.836723 | 7.92E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene30307 | 0.834142 | 3.56E-56 | -1.69E-46 |
| MS.gene057749 | MS.gene30307 | 0.814714 | 1.34E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene30307 | 0.830394 | 3.01E-55 | -1.69E-46 |
| MS.gene058007 | MS.gene30307 | 0.807094 | 5.98E-50 | -1.69E-46 |
| MS.gene058090 | MS.gene30307 | 0.822801 | 1.95E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene30307 | 0.858618 | 7.28E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene30307 | 0.843428 | 1.41E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene30307 | 0.800792 | 1.22E-48 | -1.69E-46 |
| MS.gene059368 | MS.gene30307 | 0.814489 | 1.50E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene30307 | 0.814479 | 1.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30307.t1 | MTR_8g019500 | 96.898 | 548 | 12 | 3 | 1 | 548 | 1 | 543 | 0.0 | 1098 |
| MS.gene30307.t1 | MTR_7g038720 | 94.022 | 552 | 21 | 6 | 1 | 548 | 1 | 544 | 0.0 | 1063 |
| MS.gene30307.t1 | MTR_7g030030 | 94.022 | 552 | 21 | 6 | 1 | 548 | 1 | 544 | 0.0 | 1063 |
| MS.gene30307.t1 | MTR_8g019510 | 84.783 | 184 | 7 | 1 | 559 | 721 | 94 | 277 | 2.44e-97 | 303 |
| MS.gene30307.t1 | MTR_8g019510 | 81.928 | 166 | 19 | 3 | 559 | 721 | 94 | 251 | 1.88e-81 | 261 |
| MS.gene30307.t1 | MTR_8g019490 | 63.514 | 74 | 3 | 1 | 648 | 721 | 1 | 50 | 6.98e-20 | 85.1 |
| MS.gene30307.t1 | MTR_5g014290 | 25.168 | 298 | 196 | 8 | 248 | 532 | 171 | 454 | 4.91e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30307.t1 | AT4G04770 | 76.071 | 560 | 116 | 3 | 1 | 548 | 1 | 554 | 0.0 | 881 |
| MS.gene30307.t1 | AT5G44316 | 56.498 | 554 | 148 | 8 | 1 | 548 | 1 | 467 | 0.0 | 595 |
| MS.gene30307.t1 | AT1G72640 | 52.500 | 200 | 71 | 2 | 546 | 721 | 83 | 282 | 6.98e-58 | 199 |
| MS.gene30307.t1 | AT1G72640 | 55.556 | 180 | 59 | 1 | 563 | 721 | 102 | 281 | 2.29e-57 | 197 |
| MS.gene30307.t1 | AT1G72640 | 55.333 | 150 | 46 | 1 | 563 | 691 | 102 | 251 | 1.87e-45 | 163 |
| MS.gene30307.t1 | AT1G72640 | 51.961 | 102 | 46 | 1 | 563 | 661 | 102 | 203 | 5.99e-25 | 103 |
| MS.gene30307.t1 | AT1G32500 | 24.615 | 325 | 223 | 6 | 218 | 532 | 148 | 460 | 2.28e-18 | 89.4 |
Find 186 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATTTGGTTCTTTCATTT+TGG | 0.166923 | 8.3:+71429823 | None:intergenic |
| GATTTGGTTAGGAGTTATTT+AGG | 0.182519 | 8.3:-71429524 | MS.gene30307:CDS |
| AACGAGCTTCCCGATGAATT+TGG | 0.201736 | 8.3:-71427277 | MS.gene30307:CDS |
| TTAATCTCGGGTTTGTTCTT+AGG | 0.262260 | 8.3:+71429746 | None:intergenic |
| CAATTCACCAGTCCTGATTA+TGG | 0.264858 | 8.3:+71424319 | None:intergenic |
| TAGGAGTATGGTCGAGTATT+TGG | 0.266730 | 8.3:-71429324 | MS.gene30307:CDS |
| TTGAACTTGAACGGTGGTTT+TGG | 0.284114 | 8.3:+71430078 | None:intergenic |
| TTGGGAGGAAGTGGGTTTGA+TGG | 0.306627 | 8.3:+71430137 | None:intergenic |
| CTTCCCTTTATGTATCATCT+TGG | 0.309365 | 8.3:+71428977 | None:intergenic |
| TGATAAGGGTGATTTGTGTT+TGG | 0.317122 | 8.3:+71430102 | None:intergenic |
| CGCGATTACGACAAGAAATT+CGG | 0.317548 | 8.3:-71429977 | MS.gene30307:CDS |
| ACTTGTTCAGGTTCAGTCTA+AGG | 0.317603 | 8.3:-71428889 | MS.gene30307:CDS |
| TCGTGGACCCAGGTGGAAAC+TGG | 0.318338 | 8.3:-71429110 | MS.gene30307:CDS |
| AAACGATTCTGTTCGTTTAA+CGG | 0.320292 | 8.3:+71429668 | None:intergenic |
| GATAAGGGTGATTTGTGTTT+GGG | 0.320412 | 8.3:+71430103 | None:intergenic |
| TCAAAGCAGAAGATGAAGTT+AGG | 0.331086 | 8.3:-71425906 | MS.gene30307:CDS |
| AGAGTTGCACTTGAAGCCTT+TGG | 0.333886 | 8.3:-71425212 | MS.gene30307:CDS |
| GTTTGTGTTGAAAGGCCTTT+TGG | 0.339296 | 8.3:+71429923 | None:intergenic |
| AGCAAGATGAATCTGTATTA+AGG | 0.349638 | 8.3:-71424361 | MS.gene30307:CDS |
| GAAGTATCCGAGCGTGGTTT+TGG | 0.350912 | 8.3:-71429072 | MS.gene30307:CDS |
| TTGAGTGGGTTGTGGGTGTA+AGG | 0.351235 | 8.3:+71430189 | None:intergenic |
| AGGATTAATGCGTTGGAGAC+AGG | 0.359223 | 8.3:-71429380 | MS.gene30307:CDS |
| TGTAAACAAATCTCGAATAA+AGG | 0.360001 | 8.3:-71425252 | MS.gene30307:CDS |
| TAACTATCAGCAGGCGGATA+CGG | 0.360647 | 8.3:-71429003 | MS.gene30307:CDS |
| CATTGACCACTTCCAGTTTG+TGG | 0.363373 | 8.3:+71423748 | None:intergenic |
| CAGTGTGATTCCATGCTTAT+TGG | 0.364179 | 8.3:-71428843 | MS.gene30307:CDS |
| TGCTGGTTTGAGTGGGTTGT+GGG | 0.366969 | 8.3:+71430182 | None:intergenic |
| CTTTGATTGTGGCGGATGAT+AGG | 0.369308 | 8.3:-71429343 | MS.gene30307:CDS |
| CACCTGGGTCCACGATATCT+TGG | 0.371224 | 8.3:+71429118 | None:intergenic |
| TCAGTTTATAGTGGTAAAAC+TGG | 0.374312 | 8.3:-71424425 | MS.gene30307:CDS |
| TGTTAAGGAGTATCCTGATT+TGG | 0.374858 | 8.3:-71429540 | MS.gene30307:CDS |
| ATTTGGTTAGGAGTTATTTA+GGG | 0.377879 | 8.3:-71429523 | MS.gene30307:CDS |
| TCATGCTCAATTCTTGCTGT+TGG | 0.379819 | 8.3:+71427412 | None:intergenic |
| AAATAACTCCTAACCAAATC+AGG | 0.383693 | 8.3:+71429527 | None:intergenic |
| GAGGCTAGTACGTCGAAAAT+TGG | 0.384901 | 8.3:-71427391 | MS.gene30307:CDS |
| CTCCTTAACAGCATCGGAAA+TGG | 0.385724 | 8.3:+71429553 | None:intergenic |
| TTCCATTTCCGATGCTGTTA+AGG | 0.387550 | 8.3:-71429555 | MS.gene30307:CDS |
| CTGGAGTTTGTCCCACAAAC+TGG | 0.394393 | 8.3:-71423760 | MS.gene30307:CDS |
| AGTATTCCACGGTGCAGAAT+TGG | 0.394659 | 8.3:-71429217 | MS.gene30307:CDS |
| TCTTGTCGTAATCGCGGTTA+CGG | 0.398938 | 8.3:+71429984 | None:intergenic |
| CTGCTGGTTTGAGTGGGTTG+TGG | 0.402522 | 8.3:+71430181 | None:intergenic |
| CCAAAATGAAAGAACCAAAT+TGG | 0.406308 | 8.3:-71429823 | MS.gene30307:CDS |
| TTGTTATAGAGGACTTGTTC+AGG | 0.406394 | 8.3:-71428901 | MS.gene30307:CDS |
| TCCAATCAGGTTCGGATTTG+AGG | 0.406509 | 8.3:+71429882 | None:intergenic |
| CCCTCAAATCCGAACCTGAT+TGG | 0.407574 | 8.3:-71429883 | MS.gene30307:CDS |
| CTCATGAGTTTGAAGCTTGA+GGG | 0.414161 | 8.3:-71427238 | MS.gene30307:CDS |
| AGGAGTATCCTGATTTGGTT+AGG | 0.417068 | 8.3:-71429535 | MS.gene30307:CDS |
| ACAAACTGGAAGTGGTCAAT+GGG | 0.419760 | 8.3:-71423746 | MS.gene30307:CDS |
| ATTGACCACTTCCAGTTTGT+GGG | 0.420039 | 8.3:+71423749 | None:intergenic |
| CAATACCTATCCTTACATTC+AGG | 0.426835 | 8.3:-71428805 | MS.gene30307:intron |
| CATGGGACACTTAACATCCT+TGG | 0.426886 | 8.3:+71429421 | None:intergenic |
| TATGTGTTATCTGACCAATT+TGG | 0.431143 | 8.3:+71429809 | None:intergenic |
| GCAATGGCTGCTATGATCTC+TGG | 0.432036 | 8.3:-71427319 | MS.gene30307:CDS |
| TTCTTGTAAGCTATTAATCT+CGG | 0.433516 | 8.3:+71429733 | None:intergenic |
| CCAATCAGGTTCGGATTTGA+GGG | 0.434206 | 8.3:+71429883 | None:intergenic |
| AAACTGGGTCCGCCATTACT+TGG | 0.436623 | 8.3:-71429094 | MS.gene30307:CDS |
| CGAAAATTGAGCATCCAATC+AGG | 0.439256 | 8.3:+71429869 | None:intergenic |
| AACTATCAGCAGGCGGATAC+GGG | 0.442063 | 8.3:-71429002 | MS.gene30307:CDS |
| ATATCTTGAAAATCTATAGT+TGG | 0.442228 | 8.3:+71429785 | None:intergenic |
| ATATCCAAGGGTATTTCTGC+TGG | 0.454886 | 8.3:-71428936 | MS.gene30307:CDS |
| GGGACCAAGATGATACATAA+AGG | 0.457633 | 8.3:-71428981 | MS.gene30307:CDS |
| AACGAATGGTTTGTGTTGAA+AGG | 0.459496 | 8.3:+71429915 | None:intergenic |
| GTATTTCTGCTGGACATTCA+AGG | 0.462029 | 8.3:-71428926 | MS.gene30307:CDS |
| TGGTACGCGGGTGATGAGAA+TGG | 0.462995 | 8.3:-71429197 | MS.gene30307:CDS |
| CACAAACTGGAAGTGGTCAA+TGG | 0.463510 | 8.3:-71423747 | MS.gene30307:CDS |
| TTGCAGTTGTCAGTTTATAG+TGG | 0.466226 | 8.3:-71424434 | MS.gene30307:intron |
| CCAGTCCTGATTATGGTGTA+AGG | 0.469247 | 8.3:+71424326 | None:intergenic |
| TGGCGGACCCAGTTTCCACC+TGG | 0.469453 | 8.3:+71429102 | None:intergenic |
| GAATTCCTTACACCATAATC+AGG | 0.470631 | 8.3:-71424331 | MS.gene30307:CDS |
| GTTGAGTTGTACTGCGGAGA+GGG | 0.471324 | 8.3:-71429251 | MS.gene30307:CDS |
| ATTGAGCATCCAATCAGGTT+CGG | 0.471647 | 8.3:+71429874 | None:intergenic |
| TATCTTGAAAATCTATAGTT+GGG | 0.473477 | 8.3:+71429786 | None:intergenic |
| ATGGGACACTTAACATCCTT+GGG | 0.476418 | 8.3:+71429422 | None:intergenic |
| TGAAGTTAGGGATGCAGTCC+TGG | 0.481958 | 8.3:-71425893 | MS.gene30307:CDS |
| CTCATTTGTTTATATACCCA+AGG | 0.490988 | 8.3:-71429438 | MS.gene30307:CDS |
| TCTTGTAAGCTATTAATCTC+GGG | 0.493336 | 8.3:+71429734 | None:intergenic |
| CACTATCTCCGTCTGTTACC+AGG | 0.494724 | 8.3:+71425875 | None:intergenic |
| ACCTCGGAGCCAAATTCATC+GGG | 0.494987 | 8.3:+71427268 | None:intergenic |
| CGCGGTTACGGAGAATTTCA+CGG | 0.497813 | 8.3:+71429996 | None:intergenic |
| ACAGACGGAGATAGTGATAT+CGG | 0.500112 | 8.3:-71425868 | MS.gene30307:CDS |
| CTGAATGTAAGGATAGGTAT+TGG | 0.505970 | 8.3:+71428806 | None:intergenic |
| CATTCAAGGAATTGTTATAG+AGG | 0.510304 | 8.3:-71428912 | MS.gene30307:CDS |
| GGACCAAGATGATACATAAA+GGG | 0.510423 | 8.3:-71428980 | MS.gene30307:CDS |
| CAAAGCAGAAGATGAAGTTA+GGG | 0.512273 | 8.3:-71425905 | MS.gene30307:CDS |
| TCGAAGTATCTCAAAAGCTC+AGG | 0.512282 | 8.3:+71429704 | None:intergenic |
| TGTGGCGGATGATAGGAGTA+TGG | 0.513582 | 8.3:-71429336 | MS.gene30307:CDS |
| TCATCGGTAGATGAAGAAGT+TGG | 0.514480 | 8.3:+71430025 | None:intergenic |
| GGATTAATGCGTTGGAGACA+GGG | 0.518367 | 8.3:-71429379 | MS.gene30307:CDS |
| CAAGCTTCAAACTCATGAGT+TGG | 0.519035 | 8.3:+71427242 | None:intergenic |
| CAAATCTCGAATAAAGGCAT+TGG | 0.521230 | 8.3:-71425246 | MS.gene30307:CDS |
| GAATCTGTATTAAGGAGCTC+AGG | 0.521293 | 8.3:-71424353 | MS.gene30307:CDS |
| TTGAGATACTTCGATAAGCT+CGG | 0.521652 | 8.3:-71429695 | MS.gene30307:CDS |
| ACTCATGAGTTTGAAGCTTG+AGG | 0.523317 | 8.3:-71427239 | MS.gene30307:CDS |
| ACCAGCACACAATCCTCTCT+TGG | 0.524383 | 8.3:+71429148 | None:intergenic |
| AAGTGGGTTTGATGGAGAAG+TGG | 0.525503 | 8.3:+71430145 | None:intergenic |
| CACCTCGGAGCCAAATTCAT+CGG | 0.533895 | 8.3:+71427267 | None:intergenic |
| GGTACGCGGGTGATGAGAAT+GGG | 0.534979 | 8.3:-71429196 | MS.gene30307:CDS |
| TGAGAAGCTGCTGGTTTGAG+TGG | 0.535482 | 8.3:+71430174 | None:intergenic |
| GAGGGCTGAGATTAAACGAA+TGG | 0.537778 | 8.3:+71429901 | None:intergenic |
| CGTGGACCCAGGTGGAAACT+GGG | 0.539207 | 8.3:-71429109 | MS.gene30307:CDS |
| AGCTGATTCTTATCATAAGA+AGG | 0.540471 | 8.3:+71429287 | None:intergenic |
| TCGAATAAAGGCATTGGTGA+AGG | 0.540972 | 8.3:-71425240 | MS.gene30307:CDS |
| TTGGAGGGAGACGAGAGTGT+TGG | 0.540995 | 8.3:-71429053 | MS.gene30307:CDS |
| AAAGAGTCGGATTATATCCA+AGG | 0.544871 | 8.3:-71428949 | MS.gene30307:CDS |
| AGAAAGACTCTTGAGAAGGC+TGG | 0.546698 | 8.3:-71429590 | MS.gene30307:CDS |
| GTGATGAGAATGGGAAAGGT+GGG | 0.548593 | 8.3:-71429187 | MS.gene30307:CDS |
| GATACACCTGGTGGGAAGCA+AGG | 0.551158 | 8.3:-71424293 | MS.gene30307:CDS |
| CTTGCTGCAAAGTCAATGAC+AGG | 0.552954 | 8.3:-71425105 | MS.gene30307:intron |
| ATTTGAGAGGACTTTGATTG+TGG | 0.553025 | 8.3:-71429354 | MS.gene30307:CDS |
| AACAGCATCCACCGCAACAT+TGG | 0.553710 | 8.3:+71429643 | None:intergenic |
| TTTGTCCCACAAACTGGAAG+TGG | 0.555795 | 8.3:-71423754 | MS.gene30307:CDS |
| AAAATACGTTGATATCTGCA+TGG | 0.556276 | 8.3:+71429403 | None:intergenic |
| GTTCGTATGTGTAAAAGCAC+TGG | 0.556625 | 8.3:-71423779 | MS.gene30307:CDS |
| GGTGATGAGAATGGGAAAGG+TGG | 0.557171 | 8.3:-71429188 | MS.gene30307:CDS |
| ATAAGGGTGATTTGTGTTTG+GGG | 0.558175 | 8.3:+71430104 | None:intergenic |
| GAGAAGCTGCTGGTTTGAGT+GGG | 0.558811 | 8.3:+71430175 | None:intergenic |
| CGTAACTAACTGCGTCGGAA+CGG | 0.560490 | 8.3:+71430053 | None:intergenic |
| TAAGGGTGATTTGTGTTTGG+GGG | 0.560811 | 8.3:+71430105 | None:intergenic |
| GATTCTGTCACAATCCCAAA+AGG | 0.560870 | 8.3:-71429938 | MS.gene30307:CDS |
| GTAAAGCCTTGCTTCCCACC+AGG | 0.563520 | 8.3:+71424287 | None:intergenic |
| CGGAGATAGTGATATCGGTC+GGG | 0.563944 | 8.3:-71425863 | MS.gene30307:intron |
| TACCTCAACATAATTTCCAA+AGG | 0.564714 | 8.3:+71425196 | None:intergenic |
| GCTCGGATACTTCCAAGTAA+TGG | 0.570034 | 8.3:+71429082 | None:intergenic |
| GGAACGGATTTGAACTTGAA+CGG | 0.574156 | 8.3:+71430069 | None:intergenic |
| TGTTACCTGAATGTAAGGAT+AGG | 0.574441 | 8.3:+71428800 | None:intergenic |
| TCCGTTGAGAAGAGAAGTCA+TGG | 0.574500 | 8.3:+71430222 | None:intergenic |
| TTGAGTTGTACTGCGGAGAG+GGG | 0.578213 | 8.3:-71429250 | MS.gene30307:CDS |
| TCTCCCTCCAAAACCACGCT+CGG | 0.578677 | 8.3:+71429065 | None:intergenic |
| TGGAGACAGGGCAATTTGAG+AGG | 0.582867 | 8.3:-71429367 | MS.gene30307:CDS |
| AGGATACTCCTTAACAGCAT+CGG | 0.584101 | 8.3:+71429547 | None:intergenic |
| TTTGACGAATAACTATCAGC+AGG | 0.591228 | 8.3:-71429012 | MS.gene30307:CDS |
| GGCGGACCCAGTTTCCACCT+GGG | 0.592619 | 8.3:+71429103 | None:intergenic |
| TCCATGACTTCTCTTCTCAA+CGG | 0.595997 | 8.3:-71430223 | MS.gene30307:CDS |
| CCTTACACCATAATCAGGAC+TGG | 0.596996 | 8.3:-71424326 | MS.gene30307:CDS |
| AGTATGGTCGAGTATTTGGA+AGG | 0.599972 | 8.3:-71429320 | MS.gene30307:CDS |
| GATAGACTGTACCTTGTCAA+AGG | 0.600275 | 8.3:+71424265 | None:intergenic |
| ACCAAGAGAGGATTGTGTGC+TGG | 0.602369 | 8.3:-71429149 | MS.gene30307:CDS |
| GCATAATAATTGTCGTCGCT+AGG | 0.602620 | 8.3:+71429491 | None:intergenic |
| ACGGATTTGAACTTGAACGG+TGG | 0.603758 | 8.3:+71430072 | None:intergenic |
| AAATACGTTGATATCTGCAT+GGG | 0.604737 | 8.3:+71429404 | None:intergenic |
| TCATGAGTTTGAAGCTTGAG+GGG | 0.607349 | 8.3:-71427237 | MS.gene30307:intron |
| AAGGGAAGAATACAAAGAGT+CGG | 0.607886 | 8.3:-71428962 | MS.gene30307:CDS |
| ACGGAGATAGTGATATCGGT+CGG | 0.607986 | 8.3:-71425864 | MS.gene30307:CDS |
| TGTTGAGTTGTACTGCGGAG+AGG | 0.612602 | 8.3:-71429252 | MS.gene30307:CDS |
| GTCCAAGATATCGTGGACCC+AGG | 0.612745 | 8.3:-71429120 | MS.gene30307:CDS |
| TCGTTTAGCCAATGTTGCGG+TGG | 0.619269 | 8.3:-71429651 | MS.gene30307:CDS |
| GCGGGTGATGAGAATGGGAA+AGG | 0.620116 | 8.3:-71429191 | MS.gene30307:CDS |
| TTACAGGGTTGTGCATCTAA+CGG | 0.622847 | 8.3:-71423826 | MS.gene30307:intron |
| ATGTCCAGCAGAAATACCCT+TGG | 0.626161 | 8.3:+71428932 | None:intergenic |
| CACGGTGCAGAATTGGTACG+CGG | 0.626903 | 8.3:-71429210 | MS.gene30307:CDS |
| TCCCGATGAATTTGGCTCCG+AGG | 0.627231 | 8.3:-71427269 | MS.gene30307:CDS |
| TCATAGAAAGACTCTTGAGA+AGG | 0.628059 | 8.3:-71429594 | MS.gene30307:CDS |
| AGCACTATCACCAATAAGCA+TGG | 0.629725 | 8.3:+71428833 | None:intergenic |
| GGCGGAGATTAAGTATTCCA+CGG | 0.629758 | 8.3:-71429228 | MS.gene30307:CDS |
| TGAGTTGTACTGCGGAGAGG+GGG | 0.630104 | 8.3:-71429249 | MS.gene30307:CDS |
| GCAAGGCTTTACCTTTGACA+AGG | 0.631220 | 8.3:-71424276 | MS.gene30307:intron |
| AACAGCAAGAATTGAGCATG+AGG | 0.637018 | 8.3:-71427410 | MS.gene30307:CDS |
| CGAATTTCTTGTCGTAATCG+CGG | 0.638662 | 8.3:+71429978 | None:intergenic |
| CTCCTCTCAGAGCTTTCTCG+AGG | 0.645251 | 8.3:+71425061 | None:intergenic |
| ACTCATGAGTTGGTTCACCT+CGG | 0.645821 | 8.3:+71427252 | None:intergenic |
| GAATCGTTTAGCCAATGTTG+CGG | 0.646437 | 8.3:-71429654 | MS.gene30307:CDS |
| GTAAGAAGTCCAAGATATCG+TGG | 0.647466 | 8.3:-71429127 | MS.gene30307:CDS |
| AAGAGTCGGATTATATCCAA+GGG | 0.647534 | 8.3:-71428948 | MS.gene30307:CDS |
| AGCCTTTGGAAATTATGTTG+AGG | 0.649082 | 8.3:-71425198 | MS.gene30307:intron |
| TGAGAGGACTTTGATTGTGG+CGG | 0.649909 | 8.3:-71429351 | MS.gene30307:CDS |
| CAAGATATCGTGGACCCAGG+TGG | 0.652885 | 8.3:-71429117 | MS.gene30307:CDS |
| GATGCAGTCCTGGTAACAGA+CGG | 0.654757 | 8.3:-71425883 | MS.gene30307:CDS |
| TACTTGGAAGTATCCGAGCG+TGG | 0.658816 | 8.3:-71429078 | MS.gene30307:CDS |
| TGTTCAGGTTCAGTCTAAGG+CGG | 0.661219 | 8.3:-71428886 | MS.gene30307:CDS |
| ACTATCAGCAGGCGGATACG+GGG | 0.668746 | 8.3:-71429001 | MS.gene30307:CDS |
| GTATGGTCGAGTATTTGGAA+GGG | 0.670307 | 8.3:-71429319 | MS.gene30307:CDS |
| TTCCTCGAGAAAGCTCTGAG+AGG | 0.673501 | 8.3:-71425063 | MS.gene30307:CDS |
| ATTCTTATCATAAGAAGGCG+CGG | 0.675463 | 8.3:+71429292 | None:intergenic |
| GAAGCTCGTTGAAGACATCA+CGG | 0.677101 | 8.3:+71427290 | None:intergenic |
| TAAGAATCAGCTTCATGCCG+CGG | 0.677375 | 8.3:-71429276 | MS.gene30307:CDS |
| GACGAATAACTATCAGCAGG+CGG | 0.677563 | 8.3:-71429009 | MS.gene30307:CDS |
| CGGATACTTCCAAGTAATGG+CGG | 0.687174 | 8.3:+71429085 | None:intergenic |
| AATTGCAAGATACACCTGGT+GGG | 0.691452 | 8.3:-71424301 | MS.gene30307:CDS |
| CAAACTGGAAGTGGTCAATG+GGG | 0.692175 | 8.3:-71423745 | MS.gene30307:CDS |
| AGAATCGTAACTAACTGCGT+CGG | 0.698600 | 8.3:+71430048 | None:intergenic |
| CGCGTACCAATTCTGCACCG+TGG | 0.698721 | 8.3:+71429211 | None:intergenic |
| ACGGTGCAGAATTGGTACGC+GGG | 0.715555 | 8.3:-71429209 | MS.gene30307:CDS |
| GGTGAATTGCAAGATACACC+TGG | 0.721334 | 8.3:-71424305 | MS.gene30307:CDS |
| GCGGTTGTTGAGTTGTACTG+CGG | 0.754954 | 8.3:-71429257 | MS.gene30307:CDS |
| GCAGTACAACTCAACAACCG+CGG | 0.768084 | 8.3:+71429259 | None:intergenic |
| GAATTGCAAGATACACCTGG+TGG | 0.775923 | 8.3:-71424302 | MS.gene30307:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATATTTCATTTAATTTAA+TGG | - | chr8.3:71429224-71429243 | MS.gene30307:CDS | 10.0% |
| !! | ACATCATATATCTTAAAATT+TGG | + | chr8.3:71427086-71427105 | None:intergenic | 15.0% |
| !! | ATTTAAAAAAAAAACTGTTG+TGG | - | chr8.3:71426033-71426052 | MS.gene30307:intron | 15.0% |
| !! | CATCATATATCTTAAAATTT+GGG | + | chr8.3:71427085-71427104 | None:intergenic | 15.0% |
| !! | TAAAAAAAAACTTGATATCA+TGG | - | chr8.3:71428278-71428297 | MS.gene30307:intron | 15.0% |
| !! | TATGAAATAAGCAAATTATT+AGG | + | chr8.3:71429019-71429038 | None:intergenic | 15.0% |
| !!! | TTGTATATATTTTCTAAGAT+TGG | - | chr8.3:71425381-71425400 | MS.gene30307:intron | 15.0% |
| !!! | TTGTTTTAAATGCATATAAT+AGG | - | chr8.3:71428390-71428409 | MS.gene30307:intron | 15.0% |
| !! | AAAATAAGAAGGAAACAAAT+AGG | + | chr8.3:71426441-71426460 | None:intergenic | 20.0% |
| !! | AAAATAGTTCATTGTTGATA+TGG | - | chr8.3:71426345-71426364 | MS.gene30307:intron | 20.0% |
| !! | AAAGCTAAATTTCATTGAAA+AGG | + | chr8.3:71429043-71429062 | None:intergenic | 20.0% |
| !! | ACATTACAGAATAGAAAAAA+GGG | + | chr8.3:71426466-71426485 | None:intergenic | 20.0% |
| !! | ACTTTATTAAAACAGAACAA+AGG | + | chr8.3:71429505-71429524 | None:intergenic | 20.0% |
| !! | ATATATCTTAAAATTTGGGT+TGG | + | chr8.3:71427081-71427100 | None:intergenic | 20.0% |
| !! | ATATCTTGAAAATCTATAGT+TGG | + | chr8.3:71424176-71424195 | None:intergenic | 20.0% |
| !! | ATGTAAATCAATGAATGTTA+TGG | + | chr8.3:71428621-71428640 | None:intergenic | 20.0% |
| !! | TATCTTGAAAATCTATAGTT+GGG | + | chr8.3:71424175-71424194 | None:intergenic | 20.0% |
| !! | TCAAACAACTAACATTTAAT+CGG | + | chr8.3:71428470-71428489 | None:intergenic | 20.0% |
| !! | TGATTGATAAGTTTAAAAGA+TGG | - | chr8.3:71425295-71425314 | MS.gene30307:intron | 20.0% |
| !! | TTATGTTATAGAAATAGCTT+AGG | + | chr8.3:71427740-71427759 | None:intergenic | 20.0% |
| !!! | AAACATATATAGATTTTGTC+TGG | - | chr8.3:71426884-71426903 | MS.gene30307:intron | 20.0% |
| !!! | ACAATTTTTGTTCAGAAAAA+TGG | + | chr8.3:71427707-71427726 | None:intergenic | 20.0% |
| !!! | AGCTATTTCTATAACATAAA+AGG | - | chr8.3:71427741-71427760 | MS.gene30307:intron | 20.0% |
| !!! | ATGCTTTTAGTTAATACTTA+TGG | - | chr8.3:71425267-71425286 | MS.gene30307:CDS | 20.0% |
| !!! | TATATCTTAAAATTTGGGTT+GGG | + | chr8.3:71427080-71427099 | None:intergenic | 20.0% |
| !!! | TTTGGAACTTAATATAATCA+AGG | + | chr8.3:71425653-71425672 | None:intergenic | 20.0% |
| ! | AAAAAAGGGTGAAAATAAGA+AGG | + | chr8.3:71426452-71426471 | None:intergenic | 25.0% |
| ! | AAAAATGTTACCTGAATGTA+AGG | + | chr8.3:71425166-71425185 | None:intergenic | 25.0% |
| ! | AAAATAAAGAGACTAAACCT+AGG | + | chr8.3:71427217-71427236 | None:intergenic | 25.0% |
| ! | AAATAAGCTGAAAAGGTTTA+TGG | - | chr8.3:71427835-71427854 | MS.gene30307:intron | 25.0% |
| ! | AAATCATAGCGCTATATAAT+TGG | + | chr8.3:71426059-71426078 | None:intergenic | 25.0% |
| ! | AAATGTTAGTTGTTTGATCT+TGG | - | chr8.3:71428473-71428492 | MS.gene30307:intron | 25.0% |
| ! | AATAAGCTGAAAAGGTTTAT+GGG | - | chr8.3:71427836-71427855 | MS.gene30307:intron | 25.0% |
| ! | AATAGACTATGAAAAAGCAA+TGG | - | chr8.3:71426623-71426642 | MS.gene30307:intron | 25.0% |
| ! | AATGATAAGGGGTTAAAAAA+AGG | + | chr8.3:71428129-71428148 | None:intergenic | 25.0% |
| ! | ACGATATGTTTATAAGTGAT+AGG | - | chr8.3:71427011-71427030 | MS.gene30307:intron | 25.0% |
| ! | ATAGAAACATGTATATAGGA+AGG | + | chr8.3:71428965-71428984 | None:intergenic | 25.0% |
| ! | ATAGATGCTTACTGAAATTT+GGG | - | chr8.3:71429832-71429851 | MS.gene30307:CDS | 25.0% |
| ! | ATTTGGTTAGGAGTTATTTA+GGG | - | chr8.3:71424435-71424454 | MS.gene30307:intron | 25.0% |
| ! | CAACAATGTTAATTTCAAAC+AGG | + | chr8.3:71428324-71428343 | None:intergenic | 25.0% |
| ! | CAGTTTCTAATACTTAACTA+TGG | + | chr8.3:71429349-71429368 | None:intergenic | 25.0% |
| ! | GAAAAACAATGCAAAGAAAT+TGG | - | chr8.3:71429571-71429590 | MS.gene30307:CDS | 25.0% |
| ! | GACATTACAGAATAGAAAAA+AGG | + | chr8.3:71426467-71426486 | None:intergenic | 25.0% |
| ! | TAAACCAGAATTTCAATACT+CGG | + | chr8.3:71428365-71428384 | None:intergenic | 25.0% |
| ! | TAAGCAAATTATTAGGTTTG+TGG | + | chr8.3:71429012-71429031 | None:intergenic | 25.0% |
| ! | TAGTTAAGTATTAGAAACTG+AGG | - | chr8.3:71429349-71429368 | MS.gene30307:CDS | 25.0% |
| ! | TATAGATGCTTACTGAAATT+TGG | - | chr8.3:71429831-71429850 | MS.gene30307:CDS | 25.0% |
| ! | TCTATATCAATATTACTGTG+AGG | + | chr8.3:71425562-71425581 | None:intergenic | 25.0% |
| ! | TGTAAACAAATCTCGAATAA+AGG | - | chr8.3:71428706-71428725 | MS.gene30307:intron | 25.0% |
| ! | TTAAACTAATTACATTCACC+TGG | - | chr8.3:71427350-71427369 | MS.gene30307:CDS | 25.0% |
| ! | TTATTATTAAACTCCAACCA+CGG | - | chr8.3:71427275-71427294 | MS.gene30307:CDS | 25.0% |
| ! | TTCTTGTAAGCTATTAATCT+CGG | + | chr8.3:71424228-71424247 | None:intergenic | 25.0% |
| ! | TTGTAAGGATTCAAATATGA+AGG | + | chr8.3:71427186-71427205 | None:intergenic | 25.0% |
| ! | TTTCTTCCATAACTTCAAAT+TGG | + | chr8.3:71425538-71425557 | None:intergenic | 25.0% |
| !! | AAGACGATATTTTATAAGGA+CGG | + | chr8.3:71429796-71429815 | None:intergenic | 25.0% |
| !! | ACGTAAGACGATATTTTATA+AGG | + | chr8.3:71429800-71429819 | None:intergenic | 25.0% |
| !! | ATCCAAAAATGCTGTTTATA+TGG | - | chr8.3:71427969-71427988 | MS.gene30307:intron | 25.0% |
| !! | ATGAAGGTCATAATTTGTAA+CGG | + | chr8.3:71427170-71427189 | None:intergenic | 25.0% |
| !! | TCCAAAAATGCTGTTTATAT+GGG | - | chr8.3:71427970-71427989 | MS.gene30307:intron | 25.0% |
| !! | TGAAATTGCAATTGTTTTCT+AGG | - | chr8.3:71426515-71426534 | MS.gene30307:intron | 25.0% |
| !!! | AGTTTTTGGTTTGTTTGTTT+TGG | - | chr8.3:71425951-71425970 | MS.gene30307:intron | 25.0% |
| !!! | ATACATTAAGCTTTGAAACT+TGG | + | chr8.3:71426939-71426958 | None:intergenic | 25.0% |
| !!! | ATTTTAGGTTCTGTTTCAAT+TGG | + | chr8.3:71427938-71427957 | None:intergenic | 25.0% |
| !!! | GATGTGACTTTTTTATCTAA+TGG | + | chr8.3:71429206-71429225 | None:intergenic | 25.0% |
| !!! | GTGTCTTTTATTTTGTTTAC+AGG | - | chr8.3:71426290-71426309 | MS.gene30307:intron | 25.0% |
| !!! | GTTGTTTTCATAAGCTATTT+TGG | - | chr8.3:71427801-71427820 | MS.gene30307:intron | 25.0% |
| !!! | GTTTTGTTTTTACGATTACA+GGG | - | chr8.3:71430117-71430136 | MS.gene30307:CDS | 25.0% |
| !!! | TCTTTTATTTTGTTTACAGG+TGG | - | chr8.3:71426293-71426312 | MS.gene30307:intron | 25.0% |
| !!! | TGAAATTTAGCTTTTTGTCA+AGG | - | chr8.3:71429049-71429068 | MS.gene30307:CDS | 25.0% |
| !!! | TGTTTTGTTTTTACGATTAC+AGG | - | chr8.3:71430116-71430135 | MS.gene30307:CDS | 25.0% |
| !!! | TTATTTTACTTTCAACAGAG+AGG | - | chr8.3:71426600-71426619 | MS.gene30307:intron | 25.0% |
| !!! | TTTAGTCTCTTTATTTTCTG+TGG | - | chr8.3:71427220-71427239 | MS.gene30307:intron | 25.0% |
| !!! | TTTTTATCTAATGGTGGAAA+AGG | + | chr8.3:71429197-71429216 | None:intergenic | 25.0% |
| AAAATACGTTGATATCTGCA+TGG | + | chr8.3:71424558-71424577 | None:intergenic | 30.0% | |
| AAACAGTGCCAGATTTAATA+GGG | + | chr8.3:71427435-71427454 | None:intergenic | 30.0% | |
| AAACGATTCTGTTCGTTTAA+CGG | + | chr8.3:71424293-71424312 | None:intergenic | 30.0% | |
| AAATAACTCCTAACCAAATC+AGG | + | chr8.3:71424434-71424453 | None:intergenic | 30.0% | |
| AAATACGTTGATATCTGCAT+GGG | + | chr8.3:71424557-71424576 | None:intergenic | 30.0% | |
| AAATGAGGCATGTAATGATA+AGG | + | chr8.3:71428142-71428161 | None:intergenic | 30.0% | |
| AACCACAAATACAATGACAT+AGG | + | chr8.3:71425468-71425487 | None:intergenic | 30.0% | |
| AAGTTTAAAAGATGGCGATA+AGG | - | chr8.3:71425303-71425322 | MS.gene30307:intron | 30.0% | |
| AATGAGGCATGTAATGATAA+GGG | + | chr8.3:71428141-71428160 | None:intergenic | 30.0% | |
| ACAAACAAACCAAAAACTGA+TGG | + | chr8.3:71425949-71425968 | None:intergenic | 30.0% | |
| AGAATCTGATAACTCATAAG+TGG | - | chr8.3:71428587-71428606 | MS.gene30307:intron | 30.0% | |
| AGACAAAGCCTAAACTTATA+GGG | + | chr8.3:71429134-71429153 | None:intergenic | 30.0% | |
| AGAGAAGTTATATCTAGTGT+TGG | - | chr8.3:71429396-71429415 | MS.gene30307:CDS | 30.0% | |
| AGCAAGATGAATCTGTATTA+AGG | - | chr8.3:71429597-71429616 | MS.gene30307:CDS | 30.0% | |
| AGGTAAGAATTACAAAGACA+TGG | - | chr8.3:71428410-71428429 | MS.gene30307:intron | 30.0% | |
| ATGGGAATTTCAAAATGTGT+AGG | - | chr8.3:71425330-71425349 | MS.gene30307:intron | 30.0% | |
| CAACTTAAGTTATAGTCCAA+TGG | + | chr8.3:71427530-71427549 | None:intergenic | 30.0% | |
| CATAAAGACCCTATAAGTTT+AGG | - | chr8.3:71429123-71429142 | MS.gene30307:CDS | 30.0% | |
| CATTCAAGGAATTGTTATAG+AGG | - | chr8.3:71425046-71425065 | MS.gene30307:CDS | 30.0% | |
| CATTTGATTAGAAGTTGTCA+AGG | - | chr8.3:71428157-71428176 | MS.gene30307:intron | 30.0% | |
| CCAAAATGAAAGAACCAAAT+TGG | - | chr8.3:71424135-71424154 | MS.gene30307:intron | 30.0% | |
| CGTGGTTTAGATCAAATTAA+TGG | - | chr8.3:71426133-71426152 | MS.gene30307:intron | 30.0% | |
| CTAAAGTTGAAAAGCAAAAC+AGG | + | chr8.3:71425196-71425215 | None:intergenic | 30.0% | |
| CTCATTTGTTTATATACCCA+AGG | - | chr8.3:71424520-71424539 | MS.gene30307:intron | 30.0% | |
| GAGCATAGAAACATGTATAT+AGG | + | chr8.3:71428969-71428988 | None:intergenic | 30.0% | |
| GATCTCAATATTGAGAAAGA+AGG | + | chr8.3:71427330-71427349 | None:intergenic | 30.0% | |
| GCTATGATTTAAGCACTATA+TGG | - | chr8.3:71426069-71426088 | MS.gene30307:intron | 30.0% | |
| GGTTGGAGTTTAATAATAAG+TGG | + | chr8.3:71427274-71427293 | None:intergenic | 30.0% | |
| GGTTTAGATCAAATTAATGG+CGG | - | chr8.3:71426136-71426155 | MS.gene30307:intron | 30.0% | |
| GTTCAATCAACAGAGAAAAT+GGG | + | chr8.3:71426232-71426251 | None:intergenic | 30.0% | |
| TAAACTTACGTCGAATTCTA+TGG | + | chr8.3:71429316-71429335 | None:intergenic | 30.0% | |
| TACCTATGTCATTGTATTTG+TGG | - | chr8.3:71425463-71425482 | MS.gene30307:intron | 30.0% | |
| TACCTCAACATAATTTCCAA+AGG | + | chr8.3:71428765-71428784 | None:intergenic | 30.0% | |
| TAGACAAAGCCTAAACTTAT+AGG | + | chr8.3:71429135-71429154 | None:intergenic | 30.0% | |
| TATGTGTTATCTGACCAATT+TGG | + | chr8.3:71424152-71424171 | None:intergenic | 30.0% | |
| TCAGTTTATAGTGGTAAAAC+TGG | - | chr8.3:71429533-71429552 | MS.gene30307:CDS | 30.0% | |
| TCCTTACAAAACTATATCCT+AGG | - | chr8.3:71427197-71427216 | MS.gene30307:intron | 30.0% | |
| TCTTGTAAGCTATTAATCTC+GGG | + | chr8.3:71424227-71424246 | None:intergenic | 30.0% | |
| TGAAAAGACCCTATTAAATC+TGG | - | chr8.3:71427424-71427443 | MS.gene30307:CDS | 30.0% | |
| TGACAACTTCTAATCAAATG+AGG | + | chr8.3:71428157-71428176 | None:intergenic | 30.0% | |
| TGAGTTATCAGATTCTATGA+AGG | + | chr8.3:71428583-71428602 | None:intergenic | 30.0% | |
| TGTTCAATCAACAGAGAAAA+TGG | + | chr8.3:71426233-71426252 | None:intergenic | 30.0% | |
| TTCAATCAACAGAGAAAATG+GGG | + | chr8.3:71426231-71426250 | None:intergenic | 30.0% | |
| ! | AATTTCACGGATTTTGTCAT+CGG | + | chr8.3:71423952-71423971 | None:intergenic | 30.0% |
| ! | ACCCATATAAACAGCATTTT+TGG | + | chr8.3:71427974-71427993 | None:intergenic | 30.0% |
| ! | ACTTGACCAATTTGAAGTTA+TGG | - | chr8.3:71425529-71425548 | MS.gene30307:intron | 30.0% |
| ! | AGACGATATTTTATAAGGAC+GGG | + | chr8.3:71429795-71429814 | None:intergenic | 30.0% |
| ! | AGCTGATTCTTATCATAAGA+AGG | + | chr8.3:71424674-71424693 | None:intergenic | 30.0% |
| ! | GATTTGGTTAGGAGTTATTT+AGG | - | chr8.3:71424434-71424453 | MS.gene30307:intron | 30.0% |
| ! | TATAATTTTGTGACCAAGAG+AGG | - | chr8.3:71424797-71424816 | MS.gene30307:intron | 30.0% |
| ! | TGCAGATATCAACGTATTTT+AGG | - | chr8.3:71424558-71424577 | MS.gene30307:intron | 30.0% |
| ! | TTTGAAACTTGGATGTTTCA+TGG | + | chr8.3:71426928-71426947 | None:intergenic | 30.0% |
| !! | ACTGTTTTTCTATTGTGTAC+TGG | - | chr8.3:71427558-71427577 | MS.gene30307:intron | 30.0% |
| !! | ATTTGTGGTTTCTAGTTGAA+AGG | - | chr8.3:71425478-71425497 | MS.gene30307:intron | 30.0% |
| !! | TAATTTGTAACGGATTACTC+AGG | + | chr8.3:71427160-71427179 | None:intergenic | 30.0% |
| !! | TCCACAATTTTAAGAACCAA+TGG | + | chr8.3:71426797-71426816 | None:intergenic | 30.0% |
| !! | TTACAAAACCGGCTTTTAAA+GGG | + | chr8.3:71427044-71427063 | None:intergenic | 30.0% |
| !! | TTTAAAAGCCGGTTTTGTAA+GGG | - | chr8.3:71427044-71427063 | MS.gene30307:intron | 30.0% |
| !! | TTTGTGGTTTCTAGTTGAAA+GGG | - | chr8.3:71425479-71425498 | MS.gene30307:intron | 30.0% |
| !!! | ACCTAGGATATAGTTTTGTA+AGG | + | chr8.3:71427201-71427220 | None:intergenic | 30.0% |
| !!! | CCAATTTGGTTCTTTCATTT+TGG | + | chr8.3:71424138-71424157 | None:intergenic | 30.0% |
| !!! | GTATTTTAGGATTAATGCGT+TGG | - | chr8.3:71424571-71424590 | MS.gene30307:intron | 30.0% |
| !!! | GTGACTTTTTTATCTAATGG+TGG | + | chr8.3:71429203-71429222 | None:intergenic | 30.0% |
| AAAAACAGAACTAGCAGAAC+AGG | + | chr8.3:71425794-71425813 | None:intergenic | 35.0% | |
| AAAATGGGGTCATGTAAATC+AGG | + | chr8.3:71426217-71426236 | None:intergenic | 35.0% | |
| AAAATTGTGGAAGTTCTCAG+AGG | - | chr8.3:71426806-71426825 | MS.gene30307:intron | 35.0% | |
| AAACATATAACTAGCAGACG+CGG | + | chr8.3:71430101-71430120 | None:intergenic | 35.0% | |
| AAAGAGTCGGATTATATCCA+AGG | - | chr8.3:71425009-71425028 | MS.gene30307:intron | 35.0% | |
| AACATGTATATAGGAAGGCA+TGG | + | chr8.3:71428960-71428979 | None:intergenic | 35.0% | |
| AAGAGTCGGATTATATCCAA+GGG | - | chr8.3:71425010-71425029 | MS.gene30307:intron | 35.0% | |
| AAGGGAAGAATACAAAGAGT+CGG | - | chr8.3:71424996-71425015 | MS.gene30307:intron | 35.0% | |
| ACCTAACATCAAATAGTTGC+AGG | + | chr8.3:71426188-71426207 | None:intergenic | 35.0% | |
| ATGAACTCTTCAACTCTGAA+AGG | - | chr8.3:71427499-71427518 | MS.gene30307:intron | 35.0% | |
| ATGAGGCATGTAATGATAAG+GGG | + | chr8.3:71428140-71428159 | None:intergenic | 35.0% | |
| ATTCTTATCATAAGAAGGCG+CGG | + | chr8.3:71424669-71424688 | None:intergenic | 35.0% | |
| ATTTGAGAGGACTTTGATTG+TGG | - | chr8.3:71424604-71424623 | MS.gene30307:intron | 35.0% | |
| CAAAGCAGAAGATGAAGTTA+GGG | - | chr8.3:71428053-71428072 | MS.gene30307:intron | 35.0% | |
| CAATACCTATCCTTACATTC+AGG | - | chr8.3:71425153-71425172 | MS.gene30307:intron | 35.0% | |
| CACAATAGAAAAACAGTCAG+TGG | + | chr8.3:71427555-71427574 | None:intergenic | 35.0% | |
| CTGAATGTAAGGATAGGTAT+TGG | + | chr8.3:71425155-71425174 | None:intergenic | 35.0% | |
| CTTCCCTTTATGTATCATCT+TGG | + | chr8.3:71424984-71425003 | None:intergenic | 35.0% | |
| CTTGAGGAAATAAGCTGAAA+AGG | - | chr8.3:71427828-71427847 | MS.gene30307:intron | 35.0% | |
| GAAACAGTGCCAGATTTAAT+AGG | + | chr8.3:71427436-71427455 | None:intergenic | 35.0% | |
| GAAGTAGTAGGAGTTAACTT+GGG | + | chr8.3:71426419-71426438 | None:intergenic | 35.0% | |
| GAATTCCTTACACCATAATC+AGG | - | chr8.3:71429627-71429646 | MS.gene30307:CDS | 35.0% | |
| GAGCTTATGAAAATAGCTGA+TGG | + | chr8.3:71427866-71427885 | None:intergenic | 35.0% | |
| GATGTTTCATGGATTCTTTG+TGG | + | chr8.3:71426917-71426936 | None:intergenic | 35.0% | |
| GCATGAACATCTGTATGATT+TGG | + | chr8.3:71425671-71425690 | None:intergenic | 35.0% | |
| GGAAACAAATAGGAAGTAGT+AGG | + | chr8.3:71426431-71426450 | None:intergenic | 35.0% | |
| GGAAGAACACTAGAAATTGT+TGG | - | chr8.3:71426157-71426176 | MS.gene30307:intron | 35.0% | |
| GGACCAAGATGATACATAAA+GGG | - | chr8.3:71424978-71424997 | MS.gene30307:intron | 35.0% | |
| GTTAGTTGTTTGATCTTGGA+TGG | - | chr8.3:71428477-71428496 | MS.gene30307:intron | 35.0% | |
| TAACTCAACCCTTACAAAAC+CGG | + | chr8.3:71427055-71427074 | None:intergenic | 35.0% | |
| TCAAAGCAGAAGATGAAGTT+AGG | - | chr8.3:71428052-71428071 | MS.gene30307:intron | 35.0% | |
| TCATAGAAAGACTCTTGAGA+AGG | - | chr8.3:71424364-71424383 | MS.gene30307:CDS | 35.0% | |
| TCCATGTTATGCTTGATACA+AGG | + | chr8.3:71425693-71425712 | None:intergenic | 35.0% | |
| TCCTGCAACTATTTGATGTT+AGG | - | chr8.3:71426184-71426203 | MS.gene30307:intron | 35.0% | |
| TCTAACATGCACAAGCAAAA+TGG | - | chr8.3:71429151-71429170 | MS.gene30307:CDS | 35.0% | |
| TGGCTAAAACTCTTAGTGTT+TGG | - | chr8.3:71426313-71426332 | MS.gene30307:intron | 35.0% | |
| TGTTACCTGAATGTAAGGAT+AGG | + | chr8.3:71425161-71425180 | None:intergenic | 35.0% | |
| TTACTGAAATTTGGGAAGCA+TGG | - | chr8.3:71429840-71429859 | MS.gene30307:CDS | 35.0% | |
| TTGAGATACTTCGATAAGCT+CGG | - | chr8.3:71424263-71424282 | MS.gene30307:intron | 35.0% | |
| TTGCAGTTGTCAGTTTATAG+TGG | - | chr8.3:71429524-71429543 | MS.gene30307:CDS | 35.0% | |
| TTTGAATTAGCTCAAGCCAT+TGG | - | chr8.3:71426778-71426797 | MS.gene30307:intron | 35.0% | |
| TTTGACGAATAACTATCAGC+AGG | - | chr8.3:71424946-71424965 | MS.gene30307:intron | 35.0% | |
| ! | AACGAATGGTTTGTGTTGAA+AGG | + | chr8.3:71424046-71424065 | None:intergenic | 35.0% |
| ! | AGCCTTTGGAAATTATGTTG+AGG | - | chr8.3:71428760-71428779 | MS.gene30307:intron | 35.0% |
| ! | AGCTTTTTGTCAAGGCTTTA+TGG | - | chr8.3:71429057-71429076 | MS.gene30307:CDS | 35.0% |
| ! | ATAAGGGTGATTTGTGTTTG+GGG | + | chr8.3:71423857-71423876 | None:intergenic | 35.0% |
| ! | CAAATCTCGAATAAAGGCAT+TGG | - | chr8.3:71428712-71428731 | MS.gene30307:intron | 35.0% |
| ! | CTGTTGATTGAACACAACTT+TGG | - | chr8.3:71426239-71426258 | MS.gene30307:intron | 35.0% |
| ! | GATAAGGGTGATTTGTGTTT+GGG | + | chr8.3:71423858-71423877 | None:intergenic | 35.0% |
| ! | TACTGAAATTTGGGAAGCAT+GGG | - | chr8.3:71429841-71429860 | MS.gene30307:CDS | 35.0% |
| ! | TCTAGGCTTTTTATGTTTGC+TGG | - | chr8.3:71425891-71425910 | MS.gene30307:CDS | 35.0% |
| ! | TGATAAGGGTGATTTGTGTT+TGG | + | chr8.3:71423859-71423878 | None:intergenic | 35.0% |
| ! | TGTAGTGCTTTTCTTGTGTA+TGG | - | chr8.3:71427601-71427620 | MS.gene30307:intron | 35.0% |
| ! | TTAATCTCGGGTTTGTTCTT+AGG | + | chr8.3:71424215-71424234 | None:intergenic | 35.0% |
| ! | TTGTTATAGAGGACTTGTTC+AGG | - | chr8.3:71425057-71425076 | MS.gene30307:CDS | 35.0% |
| ! | TTTGTGTTGAAAGGCCTTTT+GGG | + | chr8.3:71424037-71424056 | None:intergenic | 35.0% |
| !! | AGTTGTCAAGGTTTTAATCG+CGG | - | chr8.3:71428169-71428188 | MS.gene30307:intron | 35.0% |
| !! | CTTACAAAACCGGCTTTTAA+AGG | + | chr8.3:71427045-71427064 | None:intergenic | 35.0% |
| !! | CTTTAAAAGCCGGTTTTGTA+AGG | - | chr8.3:71427043-71427062 | MS.gene30307:intron | 35.0% |
| !! | GCCATTGGTTCTTAAAATTG+TGG | - | chr8.3:71426793-71426812 | MS.gene30307:intron | 35.0% |
| !! | TAAGCACTTGTGAAAGTGTT+TGG | + | chr8.3:71427891-71427910 | None:intergenic | 35.0% |
| !! | TGTTAAGGAGTATCCTGATT+TGG | - | chr8.3:71424418-71424437 | MS.gene30307:CDS | 35.0% |
| !! | TTCAGAGTATCGTTGTAACT+TGG | + | chr8.3:71427408-71427427 | None:intergenic | 35.0% |
| !! | TTGTGGTTTCTAGTTGAAAG+GGG | - | chr8.3:71425480-71425499 | MS.gene30307:intron | 35.0% |
| !!! | ACTTTTTCGACTAATACACG+TGG | - | chr8.3:71426115-71426134 | MS.gene30307:intron | 35.0% |
| !!! | AGTCTCTTTATTTTCTGTGG+TGG | - | chr8.3:71427223-71427242 | MS.gene30307:intron | 35.0% |
| !!! | CTGATTTGTGCTGTGTTTTT+TGG | - | chr8.3:71428654-71428673 | MS.gene30307:intron | 35.0% |
| !!! | GAGTGTTGGTGAGTTTTATT+CGG | - | chr8.3:71424919-71424938 | MS.gene30307:intron | 35.0% |
| !!! | TGTTCTGCTAGTTCTGTTTT+TGG | - | chr8.3:71425793-71425812 | MS.gene30307:intron | 35.0% |
| !!! | TGTTTTTTGGCTTATGCAGA+TGG | - | chr8.3:71428667-71428686 | MS.gene30307:intron | 35.0% |
| AACAAAGGTTGTCTTTGTGG+TGG | + | chr8.3:71429490-71429509 | None:intergenic | 40.0% | |
| AACAGCAAGAATTGAGCATG+AGG | - | chr8.3:71426548-71426567 | MS.gene30307:intron | 40.0% | |
| AATTGCAAGATACACCTGGT+GGG | - | chr8.3:71429657-71429676 | MS.gene30307:CDS | 40.0% | |
| ACAAACCAAAAACTGATGGC+AGG | + | chr8.3:71425945-71425964 | None:intergenic | 40.0% | |
| ACAAACTGGAAGTGGTCAAT+GGG | - | chr8.3:71430212-71430231 | MS.gene30307:CDS | 40.0% | |
| ACAGACGGAGATAGTGATAT+CGG | - | chr8.3:71428090-71428109 | MS.gene30307:intron | 40.0% | |
| AGAATCGTAACTAACTGCGT+CGG | + | chr8.3:71423913-71423932 | None:intergenic | 40.0% | |
| AGCACTATCACCAATAAGCA+TGG | + | chr8.3:71425128-71425147 | None:intergenic | 40.0% | |
| AGCCTAGAAAACAAACACAC+AGG | + | chr8.3:71425879-71425898 | None:intergenic | 40.0% | |
| AGGATACTCCTTAACAGCAT+CGG | + | chr8.3:71424414-71424433 | None:intergenic | 40.0% | |
| AGTACCATCAACCAAAATGG+CGG | + | chr8.3:71427683-71427702 | None:intergenic | 40.0% | |
| AGTATGGTCGAGTATTTGGA+AGG | - | chr8.3:71424638-71424657 | MS.gene30307:intron | 40.0% | |
| ATGGGACACTTAACATCCTT+GGG | + | chr8.3:71424539-71424558 | None:intergenic | 40.0% | |
| ATTGACCACTTCCAGTTTGT+GGG | + | chr8.3:71430212-71430231 | None:intergenic | 40.0% | |
| ATTGAGCATCCAATCAGGTT+CGG | + | chr8.3:71424087-71424106 | None:intergenic | 40.0% | |
| CAAGCTTCAAACTCATGAGT+TGG | + | chr8.3:71426719-71426738 | None:intergenic | 40.0% | |
| CAATTCACCAGTCCTGATTA+TGG | + | chr8.3:71429642-71429661 | None:intergenic | 40.0% | |
| CAGAACAAAGGTTGTCTTTG+TGG | + | chr8.3:71429493-71429512 | None:intergenic | 40.0% | |
| CAGTGTGATTCCATGCTTAT+TGG | - | chr8.3:71425115-71425134 | MS.gene30307:intron | 40.0% | |
| CGAAAATTGAGCATCCAATC+AGG | + | chr8.3:71424092-71424111 | None:intergenic | 40.0% | |
| CGAATTTCTTGTCGTAATCG+CGG | + | chr8.3:71423983-71424002 | None:intergenic | 40.0% | |
| CGCGATTACGACAAGAAATT+CGG | - | chr8.3:71423981-71424000 | MS.gene30307:intron | 40.0% | |
| GAAAGGGGAGACAGATATAA+AGG | - | chr8.3:71425495-71425514 | MS.gene30307:intron | 40.0% | |
| GAATCGTTTAGCCAATGTTG+CGG | - | chr8.3:71424304-71424323 | MS.gene30307:CDS | 40.0% | |
| GAATCTGTATTAAGGAGCTC+AGG | - | chr8.3:71429605-71429624 | MS.gene30307:CDS | 40.0% | |
| GAGATTTATTGATCCAGTGG+TGG | - | chr8.3:71429248-71429267 | MS.gene30307:CDS | 40.0% | |
| GATAGACTGTACCTTGTCAA+AGG | + | chr8.3:71429696-71429715 | None:intergenic | 40.0% | |
| GATTCTGTCACAATCCCAAA+AGG | - | chr8.3:71424020-71424039 | MS.gene30307:intron | 40.0% | |
| GCATAATAATTGTCGTCGCT+AGG | + | chr8.3:71424470-71424489 | None:intergenic | 40.0% | |
| GCCTTGTATCAAGCATAACA+TGG | - | chr8.3:71425689-71425708 | MS.gene30307:intron | 40.0% | |
| GGAAGTAGTAGGAGTTAACT+TGG | + | chr8.3:71426420-71426439 | None:intergenic | 40.0% | |
| GGCAAGTTATGCATACGTTT+GGG | + | chr8.3:71428939-71428958 | None:intergenic | 40.0% | |
| GGGACCAAGATGATACATAA+AGG | - | chr8.3:71424977-71424996 | MS.gene30307:intron | 40.0% | |
| GGTGAGATTTATTGATCCAG+TGG | - | chr8.3:71429245-71429264 | MS.gene30307:CDS | 40.0% | |
| GTAAGAAGTCCAAGATATCG+TGG | - | chr8.3:71424831-71424850 | MS.gene30307:intron | 40.0% | |
| GTATGGTCGAGTATTTGGAA+GGG | - | chr8.3:71424639-71424658 | MS.gene30307:intron | 40.0% | |
| TACGCAAAACACAGACAACT+AGG | + | chr8.3:71428005-71428024 | None:intergenic | 40.0% | |
| TCATCGGTAGATGAAGAAGT+TGG | + | chr8.3:71423936-71423955 | None:intergenic | 40.0% | |
| TGAGCCATCACTAAAAACAG+CGG | + | chr8.3:71424504-71424523 | None:intergenic | 40.0% | |
| TGGCAAGTTATGCATACGTT+TGG | + | chr8.3:71428940-71428959 | None:intergenic | 40.0% | |
| TTACAGGGTTGTGCATCTAA+CGG | - | chr8.3:71430132-71430151 | MS.gene30307:CDS | 40.0% | |
| TTCATGGATTCTTTGTGGCA+TGG | + | chr8.3:71426912-71426931 | None:intergenic | 40.0% | |
| TTCCATTTCCGATGCTGTTA+AGG | - | chr8.3:71424403-71424422 | MS.gene30307:CDS | 40.0% | |
| TTGTCTTTGTGGTGGTACAA+GGG | + | chr8.3:71429482-71429501 | None:intergenic | 40.0% | |
| TTTCATGAGCAGAAGTCTTG+AGG | + | chr8.3:71426500-71426519 | None:intergenic | 40.0% | |
| ! | AATCAATGCTTTTACAGCCG+TGG | + | chr8.3:71427295-71427314 | None:intergenic | 40.0% |
| ! | ACTCATGAGTTTGAAGCTTG+AGG | - | chr8.3:71426719-71426738 | MS.gene30307:intron | 40.0% |
| ! | ACTTGTTCAGGTTCAGTCTA+AGG | - | chr8.3:71425069-71425088 | MS.gene30307:CDS | 40.0% |
| ! | AGTAGGAGTTAACTTGGGTA+TGG | + | chr8.3:71426414-71426433 | None:intergenic | 40.0% |
| ! | AGTCGGATAAACAGCTTGTT+AGG | - | chr8.3:71426746-71426765 | MS.gene30307:intron | 40.0% |
| ! | CTCATGAGTTTGAAGCTTGA+GGG | - | chr8.3:71426720-71426739 | MS.gene30307:intron | 40.0% |
| ! | GGAACGGATTTGAACTTGAA+CGG | + | chr8.3:71423892-71423911 | None:intergenic | 40.0% |
| ! | GTATTTCTGCTGGACATTCA+AGG | - | chr8.3:71425032-71425051 | MS.gene30307:intron | 40.0% |
| ! | GTTCGTATGTGTAAAAGCAC+TGG | - | chr8.3:71430179-71430198 | MS.gene30307:CDS | 40.0% |
| ! | GTTTGTGTTGAAAGGCCTTT+TGG | + | chr8.3:71424038-71424057 | None:intergenic | 40.0% |
| ! | TAAGGGTGATTTGTGTTTGG+GGG | + | chr8.3:71423856-71423875 | None:intergenic | 40.0% |
| ! | TAGGAGTATGGTCGAGTATT+TGG | - | chr8.3:71424634-71424653 | MS.gene30307:intron | 40.0% |
| ! | TCATGAGTTTGAAGCTTGAG+GGG | - | chr8.3:71426721-71426740 | MS.gene30307:intron | 40.0% |
| ! | TCATGCTCAATTCTTGCTGT+TGG | + | chr8.3:71426549-71426568 | None:intergenic | 40.0% |
| ! | TCGAAGTATCTCAAAAGCTC+AGG | + | chr8.3:71424257-71424276 | None:intergenic | 40.0% |
| ! | TTGAACTTGAACGGTGGTTT+TGG | + | chr8.3:71423883-71423902 | None:intergenic | 40.0% |
| ! | TTGGTAGCCTTCAACTTCAA+GGG | - | chr8.3:71429415-71429434 | MS.gene30307:CDS | 40.0% |
| !! | AAGAGAGTACCTGTGATAAG+AGG | + | chr8.3:71429455-71429474 | None:intergenic | 40.0% |
| !! | AAGCTATTTTGGAGAGCTTG+AGG | - | chr8.3:71427812-71427831 | MS.gene30307:intron | 40.0% |
| !! | AGGAGTATCCTGATTTGGTT+AGG | - | chr8.3:71424423-71424442 | MS.gene30307:CDS | 40.0% |
| !! | ATATCCAAGGGTATTTCTGC+TGG | - | chr8.3:71425022-71425041 | MS.gene30307:intron | 40.0% |
| !! | GCATCCGAGTATTGAAATTC+TGG | - | chr8.3:71428358-71428377 | MS.gene30307:intron | 40.0% |
| !! | GGAAGTACCATCAACCAAAA+TGG | + | chr8.3:71427686-71427705 | None:intergenic | 40.0% |
| !! | GGATCACTGTGAGTCATTTT+AGG | + | chr8.3:71427953-71427972 | None:intergenic | 40.0% |
| !! | TCGAATAAAGGCATTGGTGA+AGG | - | chr8.3:71428718-71428737 | MS.gene30307:intron | 40.0% |
| !! | TGCCTGTGTGTTTGTTTTCT+AGG | - | chr8.3:71425874-71425893 | MS.gene30307:CDS | 40.0% |
| !! | TTATAAGGACGGGTTAGACT+CGG | + | chr8.3:71429785-71429804 | None:intergenic | 40.0% |
| !!! | AACGGTGGTTTTGGATGATA+AGG | + | chr8.3:71423874-71423893 | None:intergenic | 40.0% |
| !!! | AATGCCGCTGTTTTTAGTGA+TGG | - | chr8.3:71424497-71424516 | MS.gene30307:intron | 40.0% |
| !!! | ACGGTGGTTTTGGATGATAA+GGG | + | chr8.3:71423873-71423892 | None:intergenic | 40.0% |
| !!! | AGTTCTGTTTTTGGCTGGTT+GGG | - | chr8.3:71425802-71425821 | MS.gene30307:intron | 40.0% |
| !!! | ATTTTGAGATTGGGAGGAAG+TGG | + | chr8.3:71423833-71423852 | None:intergenic | 40.0% |
| !!! | GTGTGTTTCTGTTTTGGTTG+CGG | - | chr8.3:71425754-71425773 | MS.gene30307:intron | 40.0% |
| !!! | GTTTGGGGGATTTTGAGATT+GGG | + | chr8.3:71423842-71423861 | None:intergenic | 40.0% |
| !!! | TAGTTCTGTTTTTGGCTGGT+TGG | - | chr8.3:71425801-71425820 | MS.gene30307:intron | 40.0% |
| !!! | TGGTTTTTTTGAGAAGCTGC+TGG | + | chr8.3:71423796-71423815 | None:intergenic | 40.0% |
| !!! | TGTTTGGGGGATTTTGAGAT+TGG | + | chr8.3:71423843-71423862 | None:intergenic | 40.0% |
| !!! | TTTTGAGATTGGGAGGAAGT+GGG | + | chr8.3:71423832-71423851 | None:intergenic | 40.0% |
| AACGAGCTTCCCGATGAATT+TGG | - | chr8.3:71426681-71426700 | MS.gene30307:intron | 45.0% | |
| AACGGCGAGGAAATACAAAG+AGG | + | chr8.3:71425977-71425996 | None:intergenic | 45.0% | |
| AAGATGGCGATAAGGAAGCA+TGG | - | chr8.3:71425311-71425330 | MS.gene30307:intron | 45.0% | |
| ACGGAGATAGTGATATCGGT+CGG | - | chr8.3:71428094-71428113 | MS.gene30307:intron | 45.0% | |
| ACGGATTTGAACTTGAACGG+TGG | + | chr8.3:71423889-71423908 | None:intergenic | 45.0% | |
| ACTTCAAGGGGTAAAGCATG+TGG | - | chr8.3:71429428-71429447 | MS.gene30307:CDS | 45.0% | |
| AGAAAGACTCTTGAGAAGGC+TGG | - | chr8.3:71424368-71424387 | MS.gene30307:CDS | 45.0% | |
| AGAGTTGCACTTGAAGCCTT+TGG | - | chr8.3:71428746-71428765 | MS.gene30307:intron | 45.0% | |
| AGGACATCTGACTTCGATCT+AGG | + | chr8.3:71428304-71428323 | None:intergenic | 45.0% | |
| AGGATTAATGCGTTGGAGAC+AGG | - | chr8.3:71424578-71424597 | MS.gene30307:intron | 45.0% | |
| AGTATTCCACGGTGCAGAAT+TGG | - | chr8.3:71424741-71424760 | MS.gene30307:intron | 45.0% | |
| ATGTCCAGCAGAAATACCCT+TGG | + | chr8.3:71425029-71425048 | None:intergenic | 45.0% | |
| CAAACTGGAAGTGGTCAATG+GGG | - | chr8.3:71430213-71430232 | MS.gene30307:CDS | 45.0% | |
| CACAAACTGGAAGTGGTCAA+TGG | - | chr8.3:71430211-71430230 | MS.gene30307:CDS | 45.0% | |
| CATGGGACACTTAACATCCT+TGG | + | chr8.3:71424540-71424559 | None:intergenic | 45.0% | |
| CATTGACCACTTCCAGTTTG+TGG | + | chr8.3:71430213-71430232 | None:intergenic | 45.0% | |
| CCAATCAGGTTCGGATTTGA+GGG | + | chr8.3:71424078-71424097 | None:intergenic | 45.0% | |
| CCAGTCCTGATTATGGTGTA+AGG | + | chr8.3:71429635-71429654 | None:intergenic | 45.0% | |
| CCTTACACCATAATCAGGAC+TGG | - | chr8.3:71429632-71429651 | MS.gene30307:CDS | 45.0% | |
| CGGATACTTCCAAGTAATGG+CGG | + | chr8.3:71424876-71424895 | None:intergenic | 45.0% | |
| CTTGCTGCAAAGTCAATGAC+AGG | - | chr8.3:71428853-71428872 | MS.gene30307:CDS | 45.0% | |
| GAAGCTCGTTGAAGACATCA+CGG | + | chr8.3:71426671-71426690 | None:intergenic | 45.0% | |
| GAATGCCTTAACCGTGTATG+AGG | - | chr8.3:71425721-71425740 | MS.gene30307:intron | 45.0% | |
| GAATTGCAAGATACACCTGG+TGG | - | chr8.3:71429656-71429675 | MS.gene30307:CDS | 45.0% | |
| GACGAATAACTATCAGCAGG+CGG | - | chr8.3:71424949-71424968 | MS.gene30307:intron | 45.0% | |
| GAGGCTAGTACGTCGAAAAT+TGG | - | chr8.3:71426567-71426586 | MS.gene30307:intron | 45.0% | |
| GAGGGCTGAGATTAAACGAA+TGG | + | chr8.3:71424060-71424079 | None:intergenic | 45.0% | |
| GAGTTCATTGCTTGTGTGCA+AGG | + | chr8.3:71427487-71427506 | None:intergenic | 45.0% | |
| GCAAGGCTTTACCTTTGACA+AGG | - | chr8.3:71429682-71429701 | MS.gene30307:CDS | 45.0% | |
| GCTCGGATACTTCCAAGTAA+TGG | + | chr8.3:71424879-71424898 | None:intergenic | 45.0% | |
| GCTTTACCCCTTGAAGTTGA+AGG | + | chr8.3:71429425-71429444 | None:intergenic | 45.0% | |
| GGATTAATGCGTTGGAGACA+GGG | - | chr8.3:71424579-71424598 | MS.gene30307:intron | 45.0% | |
| GGCGGAGATTAAGTATTCCA+CGG | - | chr8.3:71424730-71424749 | MS.gene30307:intron | 45.0% | |
| GGTGAATTGCAAGATACACC+TGG | - | chr8.3:71429653-71429672 | MS.gene30307:CDS | 45.0% | |
| GTACCATCAACCAAAATGGC+GGG | + | chr8.3:71427682-71427701 | None:intergenic | 45.0% | |
| GTGATGAGAATGGGAAAGGT+GGG | - | chr8.3:71424771-71424790 | MS.gene30307:intron | 45.0% | |
| GTTGTCTTTGTGGTGGTACA+AGG | + | chr8.3:71429483-71429502 | None:intergenic | 45.0% | |
| TAACTATCAGCAGGCGGATA+CGG | - | chr8.3:71424955-71424974 | MS.gene30307:intron | 45.0% | |
| TAAGAATCAGCTTCATGCCG+CGG | - | chr8.3:71424682-71424701 | MS.gene30307:intron | 45.0% | |
| TACCATCAACCAAAATGGCG+GGG | + | chr8.3:71427681-71427700 | None:intergenic | 45.0% | |
| TCAGACAATGCATTGCCTGA+GGG | + | chr8.3:71428517-71428536 | None:intergenic | 45.0% | |
| TCATTGCTTGTGTGCAAGGA+GGG | + | chr8.3:71427483-71427502 | None:intergenic | 45.0% | |
| TCCAATCAGGTTCGGATTTG+AGG | + | chr8.3:71424079-71424098 | None:intergenic | 45.0% | |
| TCTTGTCGTAATCGCGGTTA+CGG | + | chr8.3:71423977-71423996 | None:intergenic | 45.0% | |
| TGACTTTGCAGCAAGCAACA+TGG | + | chr8.3:71428848-71428867 | None:intergenic | 45.0% | |
| TGAGAGGACTTTGATTGTGG+CGG | - | chr8.3:71424607-71424626 | MS.gene30307:intron | 45.0% | |
| TGGTAGCCTTCAACTTCAAG+GGG | - | chr8.3:71429416-71429435 | MS.gene30307:CDS | 45.0% | |
| TGGTTGGGAGTTTCTGCTAT+GGG | - | chr8.3:71425817-71425836 | MS.gene30307:intron | 45.0% | |
| TTACTGCGAGTGCAATGCAA+AGG | + | chr8.3:71428261-71428280 | None:intergenic | 45.0% | |
| TTCATTGCTTGTGTGCAAGG+AGG | + | chr8.3:71427484-71427503 | None:intergenic | 45.0% | |
| TTTGTCCCACAAACTGGAAG+TGG | - | chr8.3:71430204-71430223 | MS.gene30307:CDS | 45.0% | |
| ! | AAGTGGGTTTGATGGAGAAG+TGG | + | chr8.3:71423816-71423835 | None:intergenic | 45.0% |
| ! | AATGCTTTTACAGCCGTGGT+TGG | + | chr8.3:71427291-71427310 | None:intergenic | 45.0% |
| ! | ACACGGTTAAGGCATTCTCT+AGG | + | chr8.3:71425718-71425737 | None:intergenic | 45.0% |
| ! | ACACGTGTACAAGTTTTGCC+AGG | + | chr8.3:71427371-71427390 | None:intergenic | 45.0% |
| ! | ACTCTGAAAGGTCTTGCCAT+TGG | - | chr8.3:71427511-71427530 | MS.gene30307:intron | 45.0% |
| ! | AGATGGCGATAAGGAAGCAT+GGG | - | chr8.3:71425312-71425331 | MS.gene30307:intron | 45.0% |
| ! | CTCCTTAACAGCATCGGAAA+TGG | + | chr8.3:71424408-71424427 | None:intergenic | 45.0% |
| ! | GGTTTCCTGCCATCAGTTTT+TGG | - | chr8.3:71425937-71425956 | MS.gene30307:intron | 45.0% |
| ! | TGATTTTCCATGCTGGTGTG+CGG | - | chr8.3:71425916-71425935 | MS.gene30307:CDS | 45.0% |
| ! | TGTTCAGGTTCAGTCTAAGG+CGG | - | chr8.3:71425072-71425091 | MS.gene30307:CDS | 45.0% |
| ! | TTGGTGCCTGTGTGATTTCT+AGG | - | chr8.3:71425851-71425870 | MS.gene30307:intron | 45.0% |
| !! | ACTCATGAGTTGGTTCACCT+CGG | + | chr8.3:71426709-71426728 | None:intergenic | 45.0% |
| !! | ATGGGGGTGTGTTTCTGTTT+TGG | - | chr8.3:71425748-71425767 | MS.gene30307:intron | 45.0% |
| !! | CAAAACCGGCTTTTAAAGGG+TGG | + | chr8.3:71427041-71427060 | None:intergenic | 45.0% |
| !! | CTTTGATTGTGGCGGATGAT+AGG | - | chr8.3:71424615-71424634 | MS.gene30307:intron | 45.0% |
| !! | GTTGGTAGCCTTCAACTTCA+AGG | - | chr8.3:71429414-71429433 | MS.gene30307:CDS | 45.0% |
| !!! | CTGCTAGTTCTGTTTTTGGC+TGG | - | chr8.3:71425797-71425816 | MS.gene30307:intron | 45.0% |
| AAACTGGGTCCGCCATTACT+TGG | - | chr8.3:71424864-71424883 | MS.gene30307:intron | 50.0% | |
| AACAGCATCCACCGCAACAT+TGG | + | chr8.3:71424318-71424337 | None:intergenic | 50.0% | |
| AACCGTGTATGAGGCGAGAT+GGG | - | chr8.3:71425730-71425749 | MS.gene30307:intron | 50.0% | |
| AACTATCAGCAGGCGGATAC+GGG | - | chr8.3:71424956-71424975 | MS.gene30307:intron | 50.0% | |
| ACCAAGAGAGGATTGTGTGC+TGG | - | chr8.3:71424809-71424828 | MS.gene30307:intron | 50.0% | |
| ACCAGCACACAATCCTCTCT+TGG | + | chr8.3:71424813-71424832 | None:intergenic | 50.0% | |
| ACCTCGGAGCCAAATTCATC+GGG | + | chr8.3:71426693-71426712 | None:intergenic | 50.0% | |
| CACCTCGGAGCCAAATTCAT+CGG | + | chr8.3:71426694-71426713 | None:intergenic | 50.0% | |
| CACTATCTCCGTCTGTTACC+AGG | + | chr8.3:71428086-71428105 | None:intergenic | 50.0% | |
| CAGGCACCTAGAAATCACAC+AGG | + | chr8.3:71425860-71425879 | None:intergenic | 50.0% | |
| CCCTCAAATCCGAACCTGAT+TGG | - | chr8.3:71424075-71424094 | MS.gene30307:intron | 50.0% | |
| CGCGGTTACGGAGAATTTCA+CGG | + | chr8.3:71423965-71423984 | None:intergenic | 50.0% | |
| CGGAGATAGTGATATCGGTC+GGG | - | chr8.3:71428095-71428114 | MS.gene30307:intron | 50.0% | |
| CGTAACTAACTGCGTCGGAA+CGG | + | chr8.3:71423908-71423927 | None:intergenic | 50.0% | |
| CTCAGACAATGCATTGCCTG+AGG | + | chr8.3:71428518-71428537 | None:intergenic | 50.0% | |
| CTGGAGTTTGTCCCACAAAC+TGG | - | chr8.3:71430198-71430217 | MS.gene30307:CDS | 50.0% | |
| CTGGTTGGGAGTTTCTGCTA+TGG | - | chr8.3:71425816-71425835 | MS.gene30307:intron | 50.0% | |
| GATGCAGTCCTGGTAACAGA+CGG | - | chr8.3:71428075-71428094 | MS.gene30307:intron | 50.0% | |
| GCAATGGCTGCTATGATCTC+TGG | - | chr8.3:71426639-71426658 | MS.gene30307:intron | 50.0% | |
| GCAGTACAACTCAACAACCG+CGG | + | chr8.3:71424702-71424721 | None:intergenic | 50.0% | |
| GCATGTGGTCCTCTTATCAC+AGG | - | chr8.3:71429443-71429462 | MS.gene30307:CDS | 50.0% | |
| GGTGATGAGAATGGGAAAGG+TGG | - | chr8.3:71424770-71424789 | MS.gene30307:intron | 50.0% | |
| GTAGACGATCAGATTCCCTC+AGG | - | chr8.3:71428499-71428518 | MS.gene30307:intron | 50.0% | |
| GTTCTCAGAGGTAGTGTGTC+TGG | - | chr8.3:71426818-71426837 | MS.gene30307:intron | 50.0% | |
| TAACCGTGTATGAGGCGAGA+TGG | - | chr8.3:71425729-71425748 | MS.gene30307:intron | 50.0% | |
| TCGTTTAGCCAATGTTGCGG+TGG | - | chr8.3:71424307-71424326 | MS.gene30307:CDS | 50.0% | |
| TCTCGCCTCATACACGGTTA+AGG | + | chr8.3:71425729-71425748 | None:intergenic | 50.0% | |
| TGAAGTTAGGGATGCAGTCC+TGG | - | chr8.3:71428065-71428084 | MS.gene30307:intron | 50.0% | |
| TGGAGACAGGGCAATTTGAG+AGG | - | chr8.3:71424591-71424610 | MS.gene30307:intron | 50.0% | |
| TTGAAGCTTGAGGGGTCAGT+CGG | - | chr8.3:71426729-71426748 | MS.gene30307:intron | 50.0% | |
| ! | AACCAAAATGGCGGGGTATG+TGG | + | chr8.3:71427674-71427693 | None:intergenic | 50.0% |
| ! | AACCACATACCCCGCCATTT+TGG | - | chr8.3:71427669-71427688 | MS.gene30307:intron | 50.0% |
| ! | CACAAGCTAGTTTCCACCAC+TGG | + | chr8.3:71429264-71429283 | None:intergenic | 50.0% |
| ! | CACGCACCAGAAGTGCAAAA+CGG | + | chr8.3:71425995-71426014 | None:intergenic | 50.0% |
| ! | GCAGACCACCCTTTAAAAGC+CGG | - | chr8.3:71427033-71427052 | MS.gene30307:intron | 50.0% |
| ! | GCGGTTGTTGAGTTGTACTG+CGG | - | chr8.3:71424701-71424720 | MS.gene30307:intron | 50.0% |
| ! | GCTATGGGTCTGCTGTGTTT+TGG | - | chr8.3:71425832-71425851 | MS.gene30307:intron | 50.0% |
| ! | GTTGAGTTGTACTGCGGAGA+GGG | - | chr8.3:71424707-71424726 | MS.gene30307:intron | 50.0% |
| ! | TGTTGAGTTGTACTGCGGAG+AGG | - | chr8.3:71424706-71424725 | MS.gene30307:intron | 50.0% |
| ! | TTGAGTTGTACTGCGGAGAG+GGG | - | chr8.3:71424708-71424727 | MS.gene30307:intron | 50.0% |
| ! | TTGGGAGGAAGTGGGTTTGA+TGG | + | chr8.3:71423824-71423843 | None:intergenic | 50.0% |
| !! | GAAGTATCCGAGCGTGGTTT+TGG | - | chr8.3:71424886-71424905 | MS.gene30307:intron | 50.0% |
| !! | GAGAAGCTGCTGGTTTGAGT+GGG | + | chr8.3:71423786-71423805 | None:intergenic | 50.0% |
| !! | GCTGGACTGATTTTCCATGC+TGG | - | chr8.3:71425909-71425928 | MS.gene30307:CDS | 50.0% |
| !! | GTGGAAAAGGCACTTGTGCA+TGG | + | chr8.3:71429184-71429203 | None:intergenic | 50.0% |
| !! | TACTTGGAAGTATCCGAGCG+TGG | - | chr8.3:71424880-71424899 | MS.gene30307:intron | 50.0% |
| !! | TGAGAAGCTGCTGGTTTGAG+TGG | + | chr8.3:71423787-71423806 | None:intergenic | 50.0% |
| !! | TGCTGGTTTGAGTGGGTTGT+GGG | + | chr8.3:71423779-71423798 | None:intergenic | 50.0% |
| !! | TGTGGCGGATGATAGGAGTA+TGG | - | chr8.3:71424622-71424641 | MS.gene30307:intron | 50.0% |
| !! | TTCCTCGAGAAAGCTCTGAG+AGG | - | chr8.3:71428895-71428914 | MS.gene30307:CDS | 50.0% |
| !! | TTGAGTGGGTTGTGGGTGTA+AGG | + | chr8.3:71423772-71423791 | None:intergenic | 50.0% |
| !!! | TACCCCGCCATTTTGGTTGA+TGG | - | chr8.3:71427676-71427695 | MS.gene30307:intron | 50.0% |
| !!! | TATCCGAGCGTGGTTTTGGA+GGG | - | chr8.3:71424890-71424909 | MS.gene30307:intron | 50.0% |
| !!! | TGGGGGATTTTGAGATTGGG+AGG | + | chr8.3:71423839-71423858 | None:intergenic | 50.0% |
| ACCGTGTATGAGGCGAGATG+GGG | - | chr8.3:71425731-71425750 | MS.gene30307:intron | 55.0% | |
| ACGGTGCAGAATTGGTACGC+GGG | - | chr8.3:71424749-71424768 | MS.gene30307:intron | 55.0% | |
| ACTATCAGCAGGCGGATACG+GGG | - | chr8.3:71424957-71424976 | MS.gene30307:intron | 55.0% | |
| CAAGATATCGTGGACCCAGG+TGG | - | chr8.3:71424841-71424860 | MS.gene30307:intron | 55.0% | |
| CACCTGGGTCCACGATATCT+TGG | + | chr8.3:71424843-71424862 | None:intergenic | 55.0% | |
| CACGGTGCAGAATTGGTACG+CGG | - | chr8.3:71424748-71424767 | MS.gene30307:intron | 55.0% | |
| CTCCTCTCAGAGCTTTCTCG+AGG | + | chr8.3:71428900-71428919 | None:intergenic | 55.0% | |
| GATACACCTGGTGGGAAGCA+AGG | - | chr8.3:71429665-71429684 | MS.gene30307:CDS | 55.0% | |
| GCGGGTGATGAGAATGGGAA+AGG | - | chr8.3:71424767-71424786 | MS.gene30307:intron | 55.0% | |
| GGTACGCGGGTGATGAGAAT+GGG | - | chr8.3:71424762-71424781 | MS.gene30307:intron | 55.0% | |
| GTAAAGCCTTGCTTCCCACC+AGG | + | chr8.3:71429674-71429693 | None:intergenic | 55.0% | |
| GTCCAAGATATCGTGGACCC+AGG | - | chr8.3:71424838-71424857 | MS.gene30307:intron | 55.0% | |
| TCTCCCTCCAAAACCACGCT+CGG | + | chr8.3:71424896-71424915 | None:intergenic | 55.0% | |
| TGAGTTGTACTGCGGAGAGG+GGG | - | chr8.3:71424709-71424728 | MS.gene30307:intron | 55.0% | |
| TGGTACGCGGGTGATGAGAA+TGG | - | chr8.3:71424761-71424780 | MS.gene30307:intron | 55.0% | |
| ! | ACCAGAAGTGCAAAACGGCG+AGG | + | chr8.3:71425990-71426009 | None:intergenic | 55.0% |
| ! | CGTTTTGCACTTCTGGTGCG+TGG | - | chr8.3:71425993-71426012 | MS.gene30307:intron | 55.0% |
| ! | TCCCGATGAATTTGGCTCCG+AGG | - | chr8.3:71426689-71426708 | MS.gene30307:intron | 55.0% |
| ! | TTGGAGGGAGACGAGAGTGT+TGG | - | chr8.3:71424905-71424924 | MS.gene30307:intron | 55.0% |
| !! | CTGCTGGTTTGAGTGGGTTG+TGG | + | chr8.3:71423780-71423799 | None:intergenic | 55.0% |
| !! | TCCTCGCCGTTTTGCACTTC+TGG | - | chr8.3:71425986-71426005 | MS.gene30307:intron | 55.0% |
| !!! | GTATCCGAGCGTGGTTTTGG+AGG | - | chr8.3:71424889-71424908 | MS.gene30307:intron | 55.0% |
| CAGGAAACCGCACACCAGCA+TGG | + | chr8.3:71425926-71425945 | None:intergenic | 60.0% | |
| CCCCCATCTCGCCTCATACA+CGG | + | chr8.3:71425735-71425754 | None:intergenic | 60.0% | |
| CCGTGTATGAGGCGAGATGG+GGG | - | chr8.3:71425732-71425751 | MS.gene30307:intron | 60.0% | |
| CGCGTACCAATTCTGCACCG+TGG | + | chr8.3:71424750-71424769 | None:intergenic | 60.0% | |
| CGTGGACCCAGGTGGAAACT+GGG | - | chr8.3:71424849-71424868 | MS.gene30307:intron | 60.0% | |
| TCGTGGACCCAGGTGGAAAC+TGG | - | chr8.3:71424848-71424867 | MS.gene30307:intron | 60.0% | |
| GGCGGACCCAGTTTCCACCT+GGG | + | chr8.3:71424858-71424877 | None:intergenic | 65.0% | |
| GTTGTACTGCGGAGAGGGGG+CGG | - | chr8.3:71424712-71424731 | MS.gene30307:intron | 65.0% | |
| ! | TGGCGGACCCAGTTTCCACC+TGG | + | chr8.3:71424859-71424878 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 71423738 | 71430242 | 71423738 | ID=MS.gene30307 |
| chr8.3 | mRNA | 71423738 | 71430242 | 71423738 | ID=MS.gene30307.t1;Parent=MS.gene30307 |
| chr8.3 | exon | 71428806 | 71430242 | 71428806 | ID=MS.gene30307.t1.exon1;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71428806 | 71430242 | 71428806 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71427238 | 71427443 | 71427238 | ID=MS.gene30307.t1.exon2;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71427238 | 71427443 | 71427238 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71425864 | 71425951 | 71425864 | ID=MS.gene30307.t1.exon3;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71425864 | 71425951 | 71425864 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71425199 | 71425294 | 71425199 | ID=MS.gene30307.t1.exon4;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71425199 | 71425294 | 71425199 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71425038 | 71425115 | 71425038 | ID=MS.gene30307.t1.exon5;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71425038 | 71425115 | 71425038 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71424277 | 71424450 | 71424277 | ID=MS.gene30307.t1.exon6;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71424277 | 71424450 | 71424277 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| chr8.3 | exon | 71423738 | 71423842 | 71423738 | ID=MS.gene30307.t1.exon7;Parent=MS.gene30307.t1 |
| chr8.3 | CDS | 71423738 | 71423842 | 71423738 | ID=cds.MS.gene30307.t1;Parent=MS.gene30307.t1 |
| Gene Sequence |
| Protein sequence |
