AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25900.t1 MTR_3g078700 91.166 566 22 2 1 565 1 539 0.0 1060
MS.gene25900.t1 MTR_3g078740 82.852 589 76 3 1 565 1 588 0.0 1023
MS.gene25900.t1 MTR_3g078730 81.770 565 76 1 1 565 1 538 0.0 943
MS.gene25900.t1 MTR_8g091390 49.818 550 269 5 17 564 26 570 0.0 561
MS.gene25900.t1 MTR_5g069680 33.511 564 321 20 4 545 6 537 7.61e-72 240
MS.gene25900.t1 MTR_7g058690 32.230 574 320 16 7 542 14 556 1.17e-71 240
MS.gene25900.t1 MTR_5g083360 30.465 581 331 18 1 544 1 545 5.56e-71 238
MS.gene25900.t1 MTR_5g081810 32.642 530 296 17 40 544 14 507 1.43e-70 236
MS.gene25900.t1 MTR_5g020620 31.634 569 327 19 1 544 8 539 3.15e-70 236
MS.gene25900.t1 MTR_7g060460 33.043 575 322 20 2 540 8 555 1.41e-69 234
MS.gene25900.t1 MTR_7g458880 31.937 573 325 17 4 540 11 554 9.66e-69 233
MS.gene25900.t1 MTR_5g020600 30.976 594 338 22 1 561 12 566 8.66e-68 229
MS.gene25900.t1 MTR_3g462760 33.272 541 316 16 22 545 23 535 1.41e-67 229
MS.gene25900.t1 MTR_7g062250 30.449 601 334 20 7 561 16 578 1.48e-67 229
MS.gene25900.t1 MTR_5g073210 31.373 561 328 18 9 541 4 535 9.30e-67 227
MS.gene25900.t1 MTR_2g008330 32.099 567 317 21 12 544 25 557 1.64e-65 224
MS.gene25900.t1 MTR_4g064530 33.031 551 299 22 25 540 44 559 2.12e-65 224
MS.gene25900.t1 MTR_3g101635 30.245 572 341 16 1 544 3 544 1.77e-62 215
MS.gene25900.t1 MTR_7g062310 30.660 561 338 14 21 553 43 580 2.43e-62 216
MS.gene25900.t1 MTR_8g027375 30.216 556 312 20 25 544 34 549 5.97e-60 209
MS.gene25900.t1 MTR_7g065980 29.066 578 339 21 7 544 3 549 1.98e-59 207
MS.gene25900.t1 MTR_4g064530 31.882 574 310 24 3 530 11 549 1.72e-58 204
MS.gene25900.t1 MTR_3g101640 30.189 583 334 23 1 544 1 549 2.13e-57 202
MS.gene25900.t1 MTR_3g071890 30.561 553 314 22 2 522 12 526 5.38e-57 201
MS.gene25900.t1 MTR_8g479390 28.007 557 335 16 25 565 31 537 1.15e-55 196
MS.gene25900.t1 MTR_4g049390 28.366 557 328 17 25 562 27 531 2.81e-55 195
MS.gene25900.t1 MTR_7g065970 28.098 573 324 23 18 544 18 548 3.98e-55 196
MS.gene25900.t1 MTR_4g132320 28.242 563 327 18 25 565 31 538 3.67e-54 192
MS.gene25900.t1 MTR_4g019225 28.546 557 331 16 24 544 25 550 6.73e-54 192
MS.gene25900.t1 MTR_3g115050 27.692 585 342 22 6 565 9 537 1.44e-53 191
MS.gene25900.t1 MTR_4g083190 26.976 582 361 20 1 562 1 538 3.47e-53 190
MS.gene25900.t1 MTR_4g048350 27.748 555 333 15 25 562 27 530 1.90e-52 187
MS.gene25900.t1 MTR_8g479380 27.341 534 316 18 48 562 52 532 6.65e-52 186
MS.gene25900.t1 MTR_5g018270 28.674 558 321 20 25 562 31 531 8.88e-52 186
MS.gene25900.t1 MTR_3g083440 27.778 576 349 21 7 562 8 536 6.33e-51 184
MS.gene25900.t1 MTR_3g083450 28.366 557 333 20 26 562 27 537 6.84e-51 184
MS.gene25900.t1 MTR_3g083390 28.007 582 340 23 7 562 8 536 8.57e-51 183
MS.gene25900.t1 MTR_3g008580 26.958 549 341 16 37 562 41 552 2.78e-50 182
MS.gene25900.t1 MTR_3g083400 27.778 576 349 21 7 562 8 536 4.86e-50 181
MS.gene25900.t1 MTR_1g026410 26.863 577 345 20 11 562 9 533 5.26e-50 181
MS.gene25900.t1 MTR_4g101650 27.837 564 337 18 27 562 29 550 6.67e-50 182
MS.gene25900.t1 MTR_3g083430 28.007 582 340 23 7 562 8 536 1.32e-49 180
MS.gene25900.t1 MTR_2g088080 27.305 564 325 19 25 562 30 534 1.40e-49 180
MS.gene25900.t1 MTR_1g090707 27.451 510 313 15 44 539 43 509 2.82e-49 180
MS.gene25900.t1 MTR_3g083410 28.224 535 318 21 48 562 12 500 7.44e-49 177
MS.gene25900.t1 MTR_4g075690 26.212 557 339 17 25 562 30 533 2.29e-48 176
MS.gene25900.t1 MTR_7g051440 26.560 561 347 19 26 562 30 549 2.62e-46 172
MS.gene25900.t1 MTR_4g083210 27.224 562 329 21 26 562 26 532 3.58e-45 167
MS.gene25900.t1 MTR_3g079660 75.556 90 22 0 476 565 5 94 3.33e-43 149
MS.gene25900.t1 MTR_2g088080 25.882 510 294 18 79 562 2 453 8.62e-38 145
MS.gene25900.t1 MTR_4g015120 33.559 295 165 9 7 296 9 277 5.40e-37 145
MS.gene25900.t1 MTR_4g015120 40.120 167 95 3 379 544 373 535 7.46e-29 121
MS.gene25900.t1 MTR_4g075690 25.957 470 282 15 25 480 30 447 5.80e-37 143
MS.gene25900.t1 MTR_2g009230 90.164 61 6 0 130 190 1 61 3.86e-33 121
MS.gene25900.t1 MTR_5g081790 30.640 297 170 10 251 524 137 420 3.99e-23 102
MS.gene25900.t1 MTR_5g081790 34.899 149 86 5 6 147 7 151 1.91e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25900.t1 AT5G21105 66.786 560 182 2 9 564 19 578 0.0 800
MS.gene25900.t1 AT5G21100 63.587 552 193 5 17 564 16 563 0.0 738
MS.gene25900.t1 AT5G21105 65.720 528 177 2 1 524 11 538 0.0 737
MS.gene25900.t1 AT4G39830 48.866 573 270 9 7 564 16 580 0.0 572
MS.gene25900.t1 AT5G21105 67.109 377 123 1 189 564 11 387 0.0 549
MS.gene25900.t1 AT4G39830 49.084 491 229 8 87 564 3 485 2.14e-168 487
MS.gene25900.t1 AT4G39830 49.080 489 228 8 89 564 3 483 1.01e-167 485
MS.gene25900.t1 AT4G39830 47.047 491 226 9 87 564 3 472 4.78e-155 452
MS.gene25900.t1 AT5G05390 29.604 581 334 17 1 544 1 543 1.14e-70 237
MS.gene25900.t1 AT5G58910 32.310 554 305 20 24 544 29 545 7.10e-67 227
MS.gene25900.t1 AT5G03260 30.973 565 330 19 7 545 6 536 1.50e-66 226
MS.gene25900.t1 AT5G58910 32.491 554 303 21 24 544 29 544 7.24e-66 224
MS.gene25900.t1 AT5G07130 32.062 577 329 19 1 544 1 547 1.68e-65 224
MS.gene25900.t1 AT5G48100 31.459 569 314 22 14 544 11 541 2.55e-64 220
MS.gene25900.t1 AT2G30210 30.309 551 333 13 21 544 22 548 4.51e-64 220
MS.gene25900.t1 AT2G29130 32.689 569 327 20 1 540 6 547 5.42e-64 219
MS.gene25900.t1 AT2G40370 28.231 588 348 16 1 544 1 558 2.60e-63 218
MS.gene25900.t1 AT5G09360 30.729 576 327 19 1 544 12 547 5.00e-63 217
MS.gene25900.t1 AT2G46570 29.982 557 318 20 22 544 29 547 3.70e-62 214
MS.gene25900.t1 AT1G18140 30.159 567 323 17 20 544 24 559 1.61e-61 213
MS.gene25900.t1 AT5G01040 29.152 566 336 17 10 544 13 544 1.64e-61 213
MS.gene25900.t1 AT5G01050 29.174 569 334 18 10 544 13 546 2.65e-61 213
MS.gene25900.t1 AT2G38080 31.525 590 332 22 8 561 5 558 2.80e-61 212
MS.gene25900.t1 AT3G09220 29.381 565 335 18 12 544 13 545 3.05e-59 207
MS.gene25900.t1 AT1G55570 30.249 562 317 22 26 562 30 541 4.77e-58 203
MS.gene25900.t1 AT5G60020 30.329 577 337 19 1 540 3 551 5.22e-58 204
MS.gene25900.t1 AT5G01190 30.511 567 333 19 24 561 24 558 9.95e-58 202
MS.gene25900.t1 AT5G58910 31.227 538 293 21 40 544 8 501 4.91e-57 200
MS.gene25900.t1 AT5G01190 30.769 546 317 19 45 561 31 544 1.19e-55 196
MS.gene25900.t1 AT5G60020 30.483 538 311 17 40 540 8 519 1.11e-54 194
MS.gene25900.t1 AT4G22010 28.674 558 326 19 25 562 26 531 1.56e-53 191
MS.gene25900.t1 AT1G21860 27.972 572 337 17 16 565 16 534 1.86e-53 190
MS.gene25900.t1 AT3G13390 29.485 563 320 23 26 562 29 540 3.71e-53 190
MS.gene25900.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene25900.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene25900.t1 AT1G21850 27.682 578 350 18 4 562 3 531 1.21e-52 188
MS.gene25900.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene25900.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene25900.t1 AT5G51480 28.164 561 341 21 27 563 30 552 2.31e-52 188
MS.gene25900.t1 AT1G75790 27.243 602 335 21 4 562 1 542 3.48e-51 184
MS.gene25900.t1 AT5G60020 29.196 572 318 21 1 524 3 535 9.59e-51 183
MS.gene25900.t1 AT5G48450 25.907 579 361 17 9 562 8 543 2.78e-50 182
MS.gene25900.t1 AT5G48450 25.907 579 361 17 9 562 8 543 5.15e-50 182
MS.gene25900.t1 AT1G76160 26.235 587 351 19 5 565 4 534 7.20e-50 181
MS.gene25900.t1 AT5G66920 26.908 524 325 12 25 539 37 511 1.25e-49 180
MS.gene25900.t1 AT2G23630 26.944 553 336 16 27 562 37 538 3.40e-48 176
MS.gene25900.t1 AT2G46570 29.234 496 280 19 83 544 4 462 4.95e-48 174
MS.gene25900.t1 AT2G23630 26.944 553 336 16 27 562 32 533 5.33e-48 176
MS.gene25900.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene25900.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene25900.t1 AT4G28090 26.792 586 344 21 9 565 9 538 6.76e-47 172
MS.gene25900.t1 AT4G37160 25.859 553 343 16 27 562 33 535 6.79e-47 172
MS.gene25900.t1 AT1G41830 24.352 579 360 18 6 562 10 532 2.09e-46 171
MS.gene25900.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene25900.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene25900.t1 AT1G55560 26.354 554 346 19 27 562 28 537 4.34e-41 156
MS.gene25900.t1 AT3G09220 28.452 478 279 17 99 544 2 448 1.17e-40 154
MS.gene25900.t1 AT4G38420 24.735 566 349 18 25 565 30 543 5.73e-40 153
MS.gene25900.t1 AT4G37160 25.966 466 284 14 27 480 33 449 7.91e-36 140
MS.gene25900.t1 AT4G38420 24.405 504 309 16 25 508 30 481 7.75e-31 126
MS.gene25900.t1 AT4G38420 24.580 476 288 15 25 480 30 454 1.82e-29 121

Find 144 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3.2:+69501177 MS.gene25900:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3.2:+69496769 MS.gene25900:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3.2:+69501407 MS.gene25900:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3.2:-69501341 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3.2:+69501094 MS.gene25900:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.2:+69501583 MS.gene25900:CDS
CATATGGTTGGACTGCATTA+AGG 0.257525 3.2:+69501576 MS.gene25900:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3.2:+69498819 MS.gene25900:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3.2:-69501108 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3.2:-69501332 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3.2:+69496069 MS.gene25900:CDS
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3.2:-69498851 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3.2:+69501603 MS.gene25900:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3.2:-69501418 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3.2:+69501604 MS.gene25900:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3.2:+69500942 MS.gene25900:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3.2:-69498893 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3.2:-69496838 None:intergenic
CATTGAACCACATTTGCATA+TGG 0.333948 3.2:+69501640 MS.gene25900:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3.2:+69501681 MS.gene25900:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3.2:+69496186 MS.gene25900:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3.2:-69500908 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3.2:+69501042 MS.gene25900:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3.2:-69496945 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3.2:-69496197 None:intergenic
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3.2:+69496070 MS.gene25900:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3.2:-69501354 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3.2:-69496210 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3.2:-69496209 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3.2:-69501710 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3.2:-69496471 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3.2:+69496410 MS.gene25900:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3.2:-69496159 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3.2:-69500972 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3.2:-69501057 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3.2:+69501161 MS.gene25900:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3.2:-69501032 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3.2:+69501095 MS.gene25900:CDS
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3.2:+69496417 MS.gene25900:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3.2:+69501560 MS.gene25900:CDS
TCCTTCTGTATGGAGCTTGT+TGG 0.424095 3.2:-69496256 None:intergenic
AATACAGATTCAAAGTTGAC+AGG 0.425137 3.2:+69496487 MS.gene25900:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3.2:+69501534 MS.gene25900:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3.2:-69496856 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3.2:-69501575 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3.2:-69496946 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3.2:-69501236 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3.2:+69501178 MS.gene25900:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3.2:-69501072 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3.2:+69496409 MS.gene25900:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3.2:-69500981 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3.2:+69501408 MS.gene25900:CDS
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3.2:+69496796 MS.gene25900:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3.2:+69501564 MS.gene25900:CDS
AGAGAGCCATTTCATTATGA+TGG 0.456007 3.2:+69496850 MS.gene25900:CDS
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3.2:-69498973 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3.2:+69501224 MS.gene25900:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3.2:-69498847 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3.2:-69498892 None:intergenic
GAATAACAGTTCCTTCTGTA+TGG 0.465247 3.2:-69496266 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3.2:-69501305 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3.2:+69501641 MS.gene25900:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3.2:-69500988 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3.2:+69496787 MS.gene25900:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3.2:+69496760 MS.gene25900:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3.2:-69501293 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3.2:+69498820 MS.gene25900:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3.2:-69501614 None:intergenic
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3.2:-69496204 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3.2:-69501122 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3.2:+69498950 MS.gene25900:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3.2:-69501056 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3.2:+69498935 MS.gene25900:CDS
TCAGAATCACAAACTTATTG+TGG 0.512257 3.2:+69500806 MS.gene25900:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3.2:-69501041 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3.2:-69501131 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3.2:+69496940 MS.gene25900:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3.2:+69496810 MS.gene25900:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3.2:+69501646 MS.gene25900:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3.2:-69501287 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3.2:+69500819 MS.gene25900:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3.2:+69496881 MS.gene25900:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3.2:+69501341 MS.gene25900:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3.2:+69496935 MS.gene25900:CDS
CAGAAGGAACTGTTATTCAC+TGG 0.535040 3.2:+69496271 MS.gene25900:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3.2:+69501335 MS.gene25900:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3.2:-69498824 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.2:+69496453 MS.gene25900:CDS
CTGTATGGAGCTTGTTGGTG+AGG 0.546569 3.2:-69496251 None:intergenic
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3.2:-69501047 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3.2:+69501413 MS.gene25900:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3.2:-69498823 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3.2:+69501647 MS.gene25900:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3.2:-69498922 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3.2:-69501647 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3.2:+69500954 MS.gene25900:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3.2:+69501443 MS.gene25900:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3.2:+69496174 MS.gene25900:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.2:+69496276 MS.gene25900:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3.2:+69498852 MS.gene25900:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3.2:-69500895 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.2:-69496760 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3.2:-69500854 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3.2:+69496164 MS.gene25900:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3.2:-69501227 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3.2:+69500809 MS.gene25900:intron
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3.2:-69498952 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.2:-69496933 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3.2:+69501289 MS.gene25900:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3.2:+69496822 MS.gene25900:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3.2:+69496951 MS.gene25900:CDS
TCGATGTCATCAACTGCGAA+TGG 0.586686 3.2:-69500855 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.2:-69501548 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.2:+69496287 MS.gene25900:CDS
CACAAGCTCACATGAACAAG+AGG 0.595059 3.2:+69496906 MS.gene25900:CDS
TTACACGTTTCAGTTGAATG+AGG 0.598282 3.2:+69501367 MS.gene25900:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3.2:-69501138 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3.2:+69496165 MS.gene25900:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3.2:+69498887 MS.gene25900:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3.2:-69498891 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3.2:+69501596 MS.gene25900:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3.2:+69498855 MS.gene25900:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.2:-69501449 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3.2:+69500867 MS.gene25900:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3.2:+69496488 MS.gene25900:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3.2:-69496888 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3.2:+69496910 MS.gene25900:CDS
ACCAACAAGCTCCATACAGA+AGG 0.620491 3.2:+69496255 MS.gene25900:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3.2:+69498786 MS.gene25900:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3.2:-69501044 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3.2:-69501290 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3.2:+69501710 MS.gene25900:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3.2:+69501432 MS.gene25900:CDS
TTCACCAATCCATCTCATTG+GGG 0.642456 3.2:-69496944 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.2:-69496426 None:intergenic
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3.2:+69496788 MS.gene25900:CDS
AATGTGGTTCAATGTGACAA+TGG 0.664380 3.2:-69501631 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3.2:-69501231 None:intergenic
TGTTGGTGAGGTCAATGACA+AGG 0.689203 3.2:-69496239 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3.2:-69501128 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3.2:-69501613 None:intergenic
GTTGGTGAGGTCAATGACAA+GGG 0.718919 3.2:-69496238 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3.2:+69501491 MS.gene25900:CDS
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3.2:-69501145 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATAAAAATTGAAAATT+GGG + chr3.2:69497661-69497680 MS.gene25900:intron 10.0%
!! CATATATATATAATATTAAC+TGG + chr3.2:69496716-69496735 MS.gene25900:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - chr3.2:69499598-69499617 None:intergenic 10.0%
!! TAGAAATAAAAATTGAAAAT+TGG + chr3.2:69497660-69497679 MS.gene25900:intron 10.0%
!!! AAATATCATAGTTTTTTTTT+TGG + chr3.2:69499611-69499630 MS.gene25900:intron 10.0%
!!! AATTTTTCTACTTTTTTTTT+TGG + chr3.2:69498361-69498380 MS.gene25900:intron 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - chr3.2:69500578-69500597 None:intergenic 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - chr3.2:69499974-69499993 None:intergenic 10.0%
!! ACTATATTATCATTCATAAA+AGG - chr3.2:69498745-69498764 None:intergenic 15.0%
!! ATATTTAATTATAACTAGAC+TGG - chr3.2:69496354-69496373 None:intergenic 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + chr3.2:69498334-69498353 MS.gene25900:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - chr3.2:69497898-69497917 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + chr3.2:69496691-69496710 MS.gene25900:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + chr3.2:69496720-69496739 MS.gene25900:intron 15.0%
!! TGTTTAATATATAAAGATAG+TGG - chr3.2:69497899-69497918 None:intergenic 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - chr3.2:69498485-69498504 None:intergenic 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + chr3.2:69499568-69499587 MS.gene25900:intron 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + chr3.2:69498603-69498622 MS.gene25900:intron 15.0%
!!! TATTTTGCATATCATTATTA+GGG + chr3.2:69499112-69499131 MS.gene25900:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + chr3.2:69499423-69499442 MS.gene25900:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + chr3.2:69497811-69497830 MS.gene25900:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr3.2:69498012-69498031 MS.gene25900:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + chr3.2:69497426-69497445 MS.gene25900:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr3.2:69498011-69498030 MS.gene25900:intron 15.0%
!! AAAAAAAAAATTGACAAGTG+GGG - chr3.2:69498271-69498290 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + chr3.2:69501094-69501113 MS.gene25900:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + chr3.2:69501095-69501114 MS.gene25900:CDS 20.0%
!! AACATATATCATATATGTAG+TGG - chr3.2:69499007-69499026 None:intergenic 20.0%
!! AACTTCACGTTAAATTATTT+AGG + chr3.2:69500410-69500429 MS.gene25900:intron 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + chr3.2:69498434-69498453 MS.gene25900:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - chr3.2:69499006-69499025 None:intergenic 20.0%
!! ACATCATATTCATATGAAAA+AGG - chr3.2:69497579-69497598 None:intergenic 20.0%
!! ATACATTCAAATAAATGAAG+CGG + chr3.2:69499946-69499965 MS.gene25900:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + chr3.2:69499495-69499514 MS.gene25900:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + chr3.2:69500367-69500386 MS.gene25900:intron 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - chr3.2:69498272-69498291 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + chr3.2:69499327-69499346 MS.gene25900:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + chr3.2:69500432-69500451 MS.gene25900:intron 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - chr3.2:69498273-69498292 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - chr3.2:69500753-69500772 None:intergenic 20.0%
!! TGTTCAATTAGTTGTTATAT+TGG + chr3.2:69499792-69499811 MS.gene25900:intron 20.0%
!! TTAAATATGTCATAATCCAT+TGG - chr3.2:69501308-69501327 None:intergenic 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + chr3.2:69500371-69500390 MS.gene25900:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG - chr3.2:69500021-69500040 None:intergenic 20.0%
!!! CAATTGATTCCTATTTTATT+TGG - chr3.2:69499244-69499263 None:intergenic 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG - chr3.2:69497874-69497893 None:intergenic 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - chr3.2:69500635-69500654 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + chr3.2:69499111-69499130 MS.gene25900:intron 20.0%
!!! TATCATAGTTTTTTTTTTGG+TGG + chr3.2:69499614-69499633 MS.gene25900:intron 20.0%
!!! TTAAATGTGATAATGATGAA+CGG + chr3.2:69500021-69500040 MS.gene25900:intron 20.0%
! AAAAAAAAATTGACAAGTGG+GGG - chr3.2:69498270-69498289 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG + chr3.2:69501408-69501427 MS.gene25900:CDS 25.0%
! AAGACAATAGAAATATGAAC+TGG + chr3.2:69498307-69498326 MS.gene25900:intron 25.0%
! AATCAATTGTCGACATAATA+AGG + chr3.2:69499255-69499274 MS.gene25900:intron 25.0%
! AATTAGTTGTTATATTGGAG+GGG + chr3.2:69499797-69499816 MS.gene25900:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - chr3.2:69499161-69499180 None:intergenic 25.0%
! AATTTGATTGATCCTAAGTA+AGG - chr3.2:69501239-69501258 None:intergenic 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - chr3.2:69497151-69497170 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + chr3.2:69500436-69500455 MS.gene25900:intron 25.0%
! ATAAAGCCAAATGTTTGTAT+AGG + chr3.2:69499766-69499785 MS.gene25900:intron 25.0%
! ATTATTAGGTATTAGGTGAA+TGG - chr3.2:69497708-69497727 None:intergenic 25.0%
! CAATTAGTTGTTATATTGGA+GGG + chr3.2:69499796-69499815 MS.gene25900:intron 25.0%
! CTCAATACACAAAACAAAAT+CGG + chr3.2:69501161-69501180 MS.gene25900:CDS 25.0%
! CTGAAACAAACAGAAATTAT+GGG - chr3.2:69500790-69500809 None:intergenic 25.0%
! CTTAGGAATTATTAGGTATT+AGG - chr3.2:69497715-69497734 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr3.2:69499658-69499677 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + chr3.2:69499305-69499324 MS.gene25900:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + chr3.2:69499376-69499395 MS.gene25900:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3.2:69497959-69497978 None:intergenic 25.0%
! TACTATTCCATTATCTTTCT+TGG - chr3.2:69498587-69498606 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr3.2:69497973-69497992 MS.gene25900:intron 25.0%
! TCAATTAGTTGTTATATTGG+AGG + chr3.2:69499795-69499814 MS.gene25900:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - chr3.2:69500789-69500808 None:intergenic 25.0%
! TGAAATAATTTAGGAACAGT+AGG + chr3.2:69499336-69499355 MS.gene25900:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - chr3.2:69499305-69499324 None:intergenic 25.0%
! TGCATAATATATACAAGGTT+CGG - chr3.2:69499653-69499672 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr3.2:69497972-69497991 MS.gene25900:intron 25.0%
! TTATTAGGTATTAGGTGAAT+GGG - chr3.2:69497707-69497726 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - chr3.2:69500991-69501010 None:intergenic 25.0%
!! CTTTCAAGAATTTTATTGTC+TGG - chr3.2:69497616-69497635 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - chr3.2:69496212-69496231 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + chr3.2:69498225-69498244 MS.gene25900:intron 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - chr3.2:69500791-69500810 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + chr3.2:69498618-69498637 MS.gene25900:intron 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - chr3.2:69496213-69496232 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - chr3.2:69500992-69501011 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - chr3.2:69500929-69500948 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + chr3.2:69497268-69497287 MS.gene25900:intron 25.0%
!!! TATTACCCATTTTTACAAGT+GGG + chr3.2:69497932-69497951 MS.gene25900:intron 25.0%
!!! TATTTCTATCATGGACATTT+TGG + chr3.2:69496769-69496788 MS.gene25900:CDS 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - chr3.2:69497529-69497548 None:intergenic 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - chr3.2:69500149-69500168 None:intergenic 25.0%
!!! TGATTCCTATTTTATTTGGT+GGG - chr3.2:69499240-69499259 None:intergenic 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + chr3.2:69499283-69499302 MS.gene25900:intron 25.0%
!!! TTGATTCCTATTTTATTTGG+TGG - chr3.2:69499241-69499260 None:intergenic 25.0%
AAAGAACGGACAACTATATA+AGG - chr3.2:69498067-69498086 None:intergenic 30.0%
AAATAAGTGATGTGTCATGT+GGG - chr3.2:69497783-69497802 None:intergenic 30.0%
AAATCGGTAGTTTCACTAAA+TGG + chr3.2:69501177-69501196 MS.gene25900:CDS 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.2:69496636-69496655 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.2:69496859-69496878 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + chr3.2:69500922-69500941 MS.gene25900:CDS 30.0%
AATACAGATTCAAAGTTGAC+AGG + chr3.2:69496487-69496506 MS.gene25900:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + chr3.2:69501178-69501197 MS.gene25900:CDS 30.0%
AATCTAAATGCATGATGCTT+TGG + chr3.2:69500645-69500664 MS.gene25900:intron 30.0%
AATCTGACTATCCAATTATG+GGG + chr3.2:69500477-69500496 MS.gene25900:intron 30.0%
AATTAATCAACATGTAGCAG+TGG - chr3.2:69496574-69496593 None:intergenic 30.0%
AATTGTCGACATAATAAGGA+AGG + chr3.2:69499259-69499278 MS.gene25900:intron 30.0%
ACAATCTGACTATCCAATTA+TGG + chr3.2:69500475-69500494 MS.gene25900:intron 30.0%
ACATCTCCTATACAAACATT+TGG - chr3.2:69499775-69499794 None:intergenic 30.0%
ACTGCAGTTATATTTCCATA+TGG + chr3.2:69501560-69501579 MS.gene25900:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + chr3.2:69496488-69496507 MS.gene25900:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - chr3.2:69499095-69499114 None:intergenic 30.0%
ATCTAAATGCATGATGCTTT+GGG + chr3.2:69500646-69500665 MS.gene25900:intron 30.0%
ATTAGTTGTTATATTGGAGG+GGG + chr3.2:69499798-69499817 MS.gene25900:intron 30.0%
ATTGAACCACATTTGCATAT+GGG + chr3.2:69501641-69501660 MS.gene25900:CDS 30.0%
CAAAAAAGACCTACAGAATA+AGG + chr3.2:69498913-69498932 MS.gene25900:CDS 30.0%
CAAAATGCAAACCAGTTAAA+TGG + chr3.2:69501407-69501426 MS.gene25900:CDS 30.0%
CAACGATGATTTGATGAAAT+GGG - chr3.2:69498211-69498230 None:intergenic 30.0%
CAATCTGACTATCCAATTAT+GGG + chr3.2:69500476-69500495 MS.gene25900:intron 30.0%
CAGTTATATTTCCATATGGT+TGG + chr3.2:69501564-69501583 MS.gene25900:CDS 30.0%
CATCTCAATTATCACCATTT+AGG + chr3.2:69499171-69499190 MS.gene25900:intron 30.0%
CATGCATGTATGATAAAATG+GGG - chr3.2:69500295-69500314 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + chr3.2:69498852-69498871 MS.gene25900:CDS 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + chr3.2:69496399-69496418 MS.gene25900:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - chr3.2:69498854-69498873 None:intergenic 30.0%
GCATAATATATACAAGGTTC+GGG - chr3.2:69499652-69499671 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - chr3.2:69500296-69500315 None:intergenic 30.0%
GCCAAATTTATGTCTATAGA+GGG + chr3.2:69500243-69500262 MS.gene25900:intron 30.0%
GTAGTTGTATTTGGATTAAC+TGG - chr3.2:69501335-69501354 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + chr3.2:69501335-69501354 MS.gene25900:CDS 30.0%
TAAATAAGTGATGTGTCATG+TGG - chr3.2:69497784-69497803 None:intergenic 30.0%
TATAGTTGTCCGTTCTTTAA+CGG + chr3.2:69498069-69498088 MS.gene25900:intron 30.0%
TCAGAATCACAAACTTATTG+TGG + chr3.2:69500806-69500825 MS.gene25900:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - chr3.2:69500247-69500266 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - chr3.2:69500297-69500316 None:intergenic 30.0%
TGCCAAATTTATGTCTATAG+AGG + chr3.2:69500242-69500261 MS.gene25900:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - chr3.2:69496346-69496365 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAT+AGG + chr3.2:69499232-69499251 MS.gene25900:intron 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.2:69496970-69496989 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + chr3.2:69499856-69499875 MS.gene25900:intron 30.0%
! AATTTTTCTTCCTCCAATGA+AGG + chr3.2:69498098-69498117 MS.gene25900:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.2:69501456-69501475 MS.gene25900:CDS 30.0%
! ATTTTTCTTCCTCCAATGAA+GGG + chr3.2:69498099-69498118 MS.gene25900:intron 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.2:69501457-69501476 MS.gene25900:CDS 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + chr3.2:69500933-69500952 MS.gene25900:CDS 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + chr3.2:69499274-69499293 MS.gene25900:intron 30.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + chr3.2:69496307-69496326 MS.gene25900:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - chr3.2:69501001-69501020 None:intergenic 30.0%
!! CTATTACCCATTTTTACAAG+TGG + chr3.2:69497931-69497950 MS.gene25900:intron 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + chr3.2:69496732-69496751 MS.gene25900:intron 30.0%
!! TATTTTATTTGGTGGGAACA+AGG - chr3.2:69499233-69499252 None:intergenic 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + chr3.2:69496822-69496841 MS.gene25900:CDS 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - chr3.2:69500923-69500942 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - chr3.2:69501163-69501182 None:intergenic 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - chr3.2:69498915-69498934 None:intergenic 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - chr3.2:69500930-69500949 None:intergenic 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + chr3.2:69499901-69499920 MS.gene25900:intron 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - chr3.2:69501160-69501179 None:intergenic 30.0%
AAACCACTTGAAAAAGACGA+AGG + chr3.2:69500108-69500127 MS.gene25900:intron 35.0%
AATAAGTGATGTGTCATGTG+GGG - chr3.2:69497782-69497801 None:intergenic 35.0%
AATGTGGTTCAATGTGACAA+TGG - chr3.2:69501634-69501653 None:intergenic 35.0%
ACAATGGTAGTTTCCTAACA+AGG + chr3.2:69497742-69497761 MS.gene25900:intron 35.0%
ACTAGCAATCCTTATTCTGT+AGG - chr3.2:69498925-69498944 None:intergenic 35.0%
AGAGAGCCATTTCATTATGA+TGG + chr3.2:69496850-69496869 MS.gene25900:CDS 35.0%
AGATTTGAATCACATGAGTG+GGG + chr3.2:69500044-69500063 MS.gene25900:intron 35.0%
ATACAAAAAGCCAGATTGTG+TGG + chr3.2:69496149-69496168 MS.gene25900:CDS 35.0%
ATAGTTGTCCGTTCTTTAAC+GGG + chr3.2:69498070-69498089 MS.gene25900:intron 35.0%
CAAATTGCATTGTTGTAGGT+TGG - chr3.2:69498850-69498869 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + chr3.2:69498855-69498874 MS.gene25900:CDS 35.0%
CACTAATAGGTCAAAGAAGT+TGG + chr3.2:69499389-69499408 MS.gene25900:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - chr3.2:69500532-69500551 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + chr3.2:69501640-69501659 MS.gene25900:CDS 35.0%
CCAACGATGATTTGATGAAA+TGG - chr3.2:69498212-69498231 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG + chr3.2:69497845-69497864 MS.gene25900:intron 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.2:69496763-69496782 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + chr3.2:69498209-69498228 MS.gene25900:intron 35.0%
CCTTGTTAGTGTATTGTCAT+TGG - chr3.2:69497848-69497867 None:intergenic 35.0%
CTACGATTCTGCACATTAAA+CGG - chr3.2:69499482-69499501 None:intergenic 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - chr3.2:69496474-69496493 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG - chr3.2:69500707-69500726 None:intergenic 35.0%
GAATAACAGTTCCTTCTGTA+TGG - chr3.2:69496269-69496288 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + chr3.2:69500809-69500828 MS.gene25900:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + chr3.2:69498577-69498596 MS.gene25900:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + chr3.2:69500043-69500062 MS.gene25900:intron 35.0%
GATGAGCATATATTTGGATG+TGG - chr3.2:69499155-69499174 None:intergenic 35.0%
GCATGCTCTTAGGAATTATT+AGG - chr3.2:69497722-69497741 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - chr3.2:69500731-69500750 None:intergenic 35.0%
TAACTGAGATGCATAGTGAT+TGG + chr3.2:69500178-69500197 MS.gene25900:intron 35.0%
TAATCCATTGGAAATCTCTC+TGG - chr3.2:69501296-69501315 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - chr3.2:69498976-69498995 None:intergenic 35.0%
TCAATCTATGGTGCAATTCA+AGG - chr3.2:69500741-69500760 None:intergenic 35.0%
TGGAGTCCTCGTATAAAATA+AGG + chr3.2:69500140-69500159 MS.gene25900:intron 35.0%
TTACACGTTTCAGTTGAATG+AGG + chr3.2:69501367-69501386 MS.gene25900:CDS 35.0%
TTATGAGACAGCTACCTAAA+TGG - chr3.2:69499188-69499207 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.2:69501583-69501602 MS.gene25900:CDS 35.0%
TTGGTCCCACTTGTAAAAAT+GGG - chr3.2:69497940-69497959 None:intergenic 35.0%
! AAACTTTTCTCATCAACACC+TGG - chr3.2:69501512-69501531 None:intergenic 35.0%
! ACTATTAGAGCATCTCCAAT+GGG - chr3.2:69498161-69498180 None:intergenic 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + chr3.2:69501432-69501451 MS.gene25900:CDS 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.2:69496760-69496779 MS.gene25900:CDS 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG + chr3.2:69496055-69496074 MS.gene25900:CDS 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - chr3.2:69501024-69501043 None:intergenic 35.0%
!! ACACTGGTTTCTTGATAACT+AGG + chr3.2:69500219-69500238 MS.gene25900:intron 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + chr3.2:69496070-69496089 MS.gene25900:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + chr3.2:69496069-69496088 MS.gene25900:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.2:69501664-69501683 MS.gene25900:CDS 35.0%
!!! AGTTTTTTTTTTGGTGGCCA+GGG + chr3.2:69499620-69499639 MS.gene25900:intron 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + chr3.2:69496064-69496083 MS.gene25900:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.2:69501470-69501489 MS.gene25900:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.2:69501464-69501483 MS.gene25900:CDS 35.0%
!!! TAGTTTTTTTTTTGGTGGCC+AGG + chr3.2:69499619-69499638 MS.gene25900:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.2:69501463-69501482 MS.gene25900:CDS 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - chr3.2:69500109-69500128 None:intergenic 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.2:69498780-69498799 MS.gene25900:intron 35.0%
AAAAAATTGACAAGTGGGGG+TGG - chr3.2:69498267-69498286 None:intergenic 40.0%
AAAATAAAGCTAACACCGCG+TGG - chr3.2:69498644-69498663 None:intergenic 40.0%
AAACGTGTAAACACCGTTAC+CGG - chr3.2:69501357-69501376 None:intergenic 40.0%
AAGAAAAACCATTGCTGGCA+TGG - chr3.2:69496631-69496650 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - chr3.2:69497555-69497574 None:intergenic 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - chr3.2:69496841-69496860 None:intergenic 40.0%
ACCACATTTGCATATGGGAA+TGG + chr3.2:69501646-69501665 MS.gene25900:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - chr3.2:69496559-69496578 None:intergenic 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.2:69501551-69501570 None:intergenic 40.0%
ATATATGTCCATGCCAGCAA+TGG + chr3.2:69496620-69496639 MS.gene25900:intron 40.0%
ATGGGAGTCCTTACTTAACA+AGG - chr3.2:69498143-69498162 None:intergenic 40.0%
ATTCATCCATGGCATTTGCA+TGG + chr3.2:69501443-69501462 MS.gene25900:CDS 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - chr3.2:69498081-69498100 None:intergenic 40.0%
CACTACCATTCCCATTTAAC+TGG - chr3.2:69501421-69501440 None:intergenic 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.2:69496271-69496290 MS.gene25900:CDS 40.0%
CATATGGTTGGACTGCATTA+AGG + chr3.2:69501576-69501595 MS.gene25900:CDS 40.0%
CATTGGAGATGCTCTAATAG+TGG + chr3.2:69498160-69498179 MS.gene25900:intron 40.0%
CCAAATACAACTACCGGTAA+CGG + chr3.2:69501341-69501360 MS.gene25900:CDS 40.0%
CCAATGAAGGGTCCTTAATA+GGG + chr3.2:69498111-69498130 MS.gene25900:intron 40.0%
CCACACTTAAGAGCTTCTTT+AGG - chr3.2:69501713-69501732 None:intergenic 40.0%
CCACATTTGCATATGGGAAT+GGG + chr3.2:69501647-69501666 MS.gene25900:CDS 40.0%
CCATTTAAGGAGTCCTTGTT+AGG - chr3.2:69497758-69497777 None:intergenic 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + chr3.2:69501710-69501729 MS.gene25900:CDS 40.0%
CCTAACAAGGACTCCTTAAA+TGG + chr3.2:69497755-69497774 MS.gene25900:intron 40.0%
CGTTTAATGTGCAGAATCGT+AGG + chr3.2:69499480-69499499 MS.gene25900:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + chr3.2:69501681-69501700 MS.gene25900:CDS 40.0%
CTTAATGCAGTCCAACCATA+TGG - chr3.2:69501578-69501597 None:intergenic 40.0%
CTTGGTCCCACTTGTAAAAA+TGG - chr3.2:69497941-69497960 None:intergenic 40.0%
GAAAACAACTCACACTCATG+TGG + chr3.2:69497635-69497654 MS.gene25900:intron 40.0%
GATTGATCCTAAGTAAGGTG+TGG - chr3.2:69501234-69501253 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + chr3.2:69501413-69501432 MS.gene25900:CDS 40.0%
GCATAGAAAACCTTGCAACT+AGG + chr3.2:69498182-69498201 MS.gene25900:intron 40.0%
GCTGTATGGTTCTCTAATAG+TGG + chr3.2:69496810-69496829 MS.gene25900:CDS 40.0%
GGAGATTTGAATCACATGAG+TGG + chr3.2:69500042-69500061 MS.gene25900:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - chr3.2:69497827-69497846 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - chr3.2:69496948-69496967 None:intergenic 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + chr3.2:69498820-69498839 MS.gene25900:CDS 40.0%
TAAATGTACAATTGGCCACG+CGG + chr3.2:69498626-69498645 MS.gene25900:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + chr3.2:69498185-69498204 MS.gene25900:intron 40.0%
TAGTTGTCCGTTCTTTAACG+GGG + chr3.2:69498071-69498090 MS.gene25900:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + chr3.2:69500493-69500512 MS.gene25900:intron 40.0%
TATTAAGGACCCTTCATTGG+AGG - chr3.2:69498111-69498130 None:intergenic 40.0%
TCCAATGAAGGGTCCTTAAT+AGG + chr3.2:69498110-69498129 MS.gene25900:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG + chr3.2:69500487-69500506 MS.gene25900:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG - chr3.2:69500491-69500510 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.2:69496453-69496472 MS.gene25900:CDS 40.0%
TGAGATGCATAGTGATTGGT+CGG + chr3.2:69500182-69500201 MS.gene25900:intron 40.0%
TGTTAAGTAAGGACTCCCAT+TGG + chr3.2:69498143-69498162 MS.gene25900:intron 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + chr3.2:69498819-69498838 MS.gene25900:CDS 40.0%
TGTTCGGTATCGTTCCATAA+GGG - chr3.2:69501059-69501078 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.2:69500984-69501003 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + chr3.2:69500492-69500511 MS.gene25900:intron 40.0%
TTCACCAATCCATCTCATTG+GGG - chr3.2:69496947-69496966 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG + chr3.2:69496596-69496615 MS.gene25900:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - chr3.2:69496612-69496631 None:intergenic 40.0%
! ATTCCTAAGAGCATGCACAA+TGG + chr3.2:69497726-69497745 MS.gene25900:intron 40.0%
! CACTATTAGAGCATCTCCAA+TGG - chr3.2:69498162-69498181 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG - chr3.2:69496613-69496632 None:intergenic 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.2:69496174-69496193 MS.gene25900:CDS 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - chr3.2:69501075-69501094 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + chr3.2:69496410-69496429 MS.gene25900:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - chr3.2:69498995-69499014 None:intergenic 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - chr3.2:69497558-69497577 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + chr3.2:69500942-69500961 MS.gene25900:CDS 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - chr3.2:69500898-69500917 None:intergenic 40.0%
AAAGACGAAGGACCACGTTA+TGG + chr3.2:69500120-69500139 MS.gene25900:intron 45.0%
AATGGAATGCCCAAACACCA+GGG - chr3.2:69501616-69501635 None:intergenic 45.0%
ACAACATGCTCCACACAATC+TGG - chr3.2:69496162-69496181 None:intergenic 45.0%
ACAAGGACCACTCCCTATTA+AGG - chr3.2:69498126-69498145 None:intergenic 45.0%
ACCAACAAGCTCCATACAGA+AGG + chr3.2:69496255-69496274 MS.gene25900:CDS 45.0%
ACCACCAGAGAGATTTCCAA+TGG + chr3.2:69501289-69501308 MS.gene25900:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + chr3.2:69496910-69496929 MS.gene25900:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + chr3.2:69496881-69496900 MS.gene25900:CDS 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - chr3.2:69501290-69501309 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.2:69501534-69501553 MS.gene25900:CDS 45.0%
CACAAGCTCACATGAACAAG+AGG + chr3.2:69496906-69496925 MS.gene25900:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - chr3.2:69499469-69499488 None:intergenic 45.0%
CCCATTCCCATATGCAAATG+TGG - chr3.2:69501650-69501669 None:intergenic 45.0%
CCCTATTAAGGACCCTTCAT+TGG - chr3.2:69498114-69498133 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - chr3.2:69501344-69501363 None:intergenic 45.0%
CGATGTCATCAACTGCGAAT+GGG - chr3.2:69500857-69500876 None:intergenic 45.0%
CTACCATTGTGCATGCTCTT+AGG - chr3.2:69497732-69497751 None:intergenic 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - chr3.2:69501230-69501249 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + chr3.2:69500867-69500886 MS.gene25900:CDS 45.0%
GATTGCTAGTACTACGTCCT+TGG + chr3.2:69498935-69498954 MS.gene25900:CDS 45.0%
GCATGGACATATATGCCACT+TGG - chr3.2:69496614-69496633 None:intergenic 45.0%
GCTCCCATATTTAGCTGCTA+GGG - chr3.2:69498826-69498845 None:intergenic 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.2:69496276-69496295 MS.gene25900:CDS 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + chr3.2:69498132-69498151 MS.gene25900:intron 45.0%
GGTTCACCAATCCATCTCAT+TGG - chr3.2:69496949-69496968 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + chr3.2:69496742-69496761 MS.gene25900:intron 45.0%
GTGTTCGGTATCGTTCCATA+AGG - chr3.2:69501060-69501079 None:intergenic 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - chr3.2:69496200-69496219 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + chr3.2:69500259-69500278 MS.gene25900:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - chr3.2:69500911-69500930 None:intergenic 45.0%
TATACGAGGACTCCATAACG+TGG - chr3.2:69500135-69500154 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - chr3.2:69501148-69501167 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.2:69501452-69501471 None:intergenic 45.0%
TCCATTGGAAATCTCTCTGG+TGG - chr3.2:69501293-69501312 None:intergenic 45.0%
TCCTTCTGTATGGAGCTTGT+TGG - chr3.2:69496259-69496278 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - chr3.2:69500858-69500877 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - chr3.2:69498040-69498059 None:intergenic 45.0%
TGAGCACACCCAATCCAATT+TGG - chr3.2:69500504-69500523 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - chr3.2:69498827-69498846 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - chr3.2:69498895-69498914 None:intergenic 45.0%
TGTCATGTGGGGTCCATTTA+AGG - chr3.2:69497771-69497790 None:intergenic 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + chr3.2:69496165-69496184 MS.gene25900:CDS 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + chr3.2:69498040-69498059 MS.gene25900:intron 45.0%
TTGCCAACCACACCTTACTT+AGG + chr3.2:69501224-69501243 MS.gene25900:CDS 45.0%
TTGGCTCCACATGAAGAATC+TGG - chr3.2:69498896-69498915 None:intergenic 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + chr3.2:69496788-69496807 MS.gene25900:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - chr3.2:69496891-69496910 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + chr3.2:69496164-69496183 MS.gene25900:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + chr3.2:69496787-69496806 MS.gene25900:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + chr3.2:69501596-69501615 MS.gene25900:CDS 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + chr3.2:69500819-69500838 MS.gene25900:CDS 45.0%
! GTTGGTGAGGTCAATGACAA+GGG - chr3.2:69496241-69496260 None:intergenic 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + chr3.2:69496409-69496428 MS.gene25900:intron 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - chr3.2:69496207-69496226 None:intergenic 45.0%
! TGTTGGTGAGGTCAATGACA+AGG - chr3.2:69496242-69496261 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.2:69501477-69501496 MS.gene25900:CDS 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - chr3.2:69500114-69500133 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.2:69501476-69501495 MS.gene25900:CDS 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + chr3.2:69498506-69498525 MS.gene25900:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + chr3.2:69499879-69499898 MS.gene25900:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + chr3.2:69498555-69498574 MS.gene25900:intron 5.0%
AAATGGGCCACCTAGTTGCA+AGG - chr3.2:69498195-69498214 None:intergenic 50.0%
AGGCAGATAACCCTGGTGTT+TGG + chr3.2:69501603-69501622 MS.gene25900:CDS 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - chr3.2:69498050-69498069 None:intergenic 50.0%
ATCGTGCGGTGTGAGGATTT+CGG - chr3.2:69501134-69501153 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.2:69496936-69496955 None:intergenic 50.0%
CAATGGAATGCCCAAACACC+AGG - chr3.2:69501617-69501636 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG + chr3.2:69499682-69499701 MS.gene25900:intron 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG - chr3.2:69499685-69499704 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - chr3.2:69498039-69498058 None:intergenic 50.0%
GAAGGGTCCTTAATAGGGAG+TGG + chr3.2:69498116-69498135 MS.gene25900:intron 50.0%
GGAATCAATGGCCAGTTTCC+AGG + chr3.2:69496186-69496205 MS.gene25900:CDS 50.0%
GGAGTTGGCATGTGAAACAC+TGG + chr3.2:69500203-69500222 MS.gene25900:intron 50.0%
GGCAGATAACCCTGGTGTTT+GGG + chr3.2:69501604-69501623 MS.gene25900:CDS 50.0%
GGCTCCACATGAAGAATCTG+GGG - chr3.2:69498894-69498913 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG + chr3.2:69501491-69501510 MS.gene25900:CDS 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + chr3.2:69500954-69500973 MS.gene25900:CDS 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + chr3.2:69498950-69498969 MS.gene25900:CDS 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + chr3.2:69498039-69498058 MS.gene25900:intron 50.0%
TATAAGGACCCTCTCTCTCC+TGG - chr3.2:69498051-69498070 None:intergenic 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.2:69496287-69496306 MS.gene25900:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + chr3.2:69496940-69496959 MS.gene25900:CDS 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.2:69496935-69496954 MS.gene25900:CDS 50.0%
TGCACCCCAGATTCTTCATG+TGG + chr3.2:69498887-69498906 MS.gene25900:CDS 50.0%
! AGCTTGCTCATCAATGGACG+AGG + chr3.2:69498786-69498805 MS.gene25900:CDS 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + chr3.2:69500188-69500207 MS.gene25900:intron 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - chr3.2:69501050-69501069 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - chr3.2:69501111-69501130 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - chr3.2:69501047-69501066 None:intergenic 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + chr3.2:69496417-69496436 MS.gene25900:CDS 50.0%
!! CTGTATGGAGCTTGTTGGTG+AGG - chr3.2:69496254-69496273 None:intergenic 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + chr3.2:69496951-69496970 MS.gene25900:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - chr3.2:69501035-69501054 None:intergenic 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + chr3.2:69496796-69496815 MS.gene25900:CDS 55.0%
CACCACCAGTCACACCCTTA+TGG + chr3.2:69501042-69501061 MS.gene25900:CDS 55.0%
TGTGAGGATTTCGGTGGCTG+TGG - chr3.2:69501125-69501144 None:intergenic 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - chr3.2:69501044-69501063 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - chr3.2:69498955-69498974 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + chr3.2:69500512-69500531 MS.gene25900:intron 55.0%
GAGGAGAATCGTGCGGTGTG+AGG - chr3.2:69501141-69501160 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.2:69496429-69496448 None:intergenic 60.0%
GTGCGGTGTGAGGATTTCGG+TGG - chr3.2:69501131-69501150 None:intergenic 60.0%
GTGGGACCCGTTAGTTACCC+AGG + chr3.2:69498030-69498049 MS.gene25900:intron 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG - chr3.2:69500975-69500994 None:intergenic 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - chr3.2:69499640-69499659 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 69496048 69501745 69496048 ID=MS.gene25900
chr3.2 mRNA 69496048 69501745 69496048 ID=MS.gene25900.t1;Parent=MS.gene25900
chr3.2 exon 69496048 69496308 69496048 ID=MS.gene25900.t1.exon1;Parent=MS.gene25900.t1
chr3.2 CDS 69496048 69496308 69496048 ID=cds.MS.gene25900.t1;Parent=MS.gene25900.t1
chr3.2 exon 69496417 69496509 69496417 ID=MS.gene25900.t1.exon2;Parent=MS.gene25900.t1
chr3.2 CDS 69496417 69496509 69496417 ID=cds.MS.gene25900.t1;Parent=MS.gene25900.t1
chr3.2 exon 69496760 69496972 69496760 ID=MS.gene25900.t1.exon3;Parent=MS.gene25900.t1
chr3.2 CDS 69496760 69496972 69496760 ID=cds.MS.gene25900.t1;Parent=MS.gene25900.t1
chr3.2 exon 69498786 69498980 69498786 ID=MS.gene25900.t1.exon4;Parent=MS.gene25900.t1
chr3.2 CDS 69498786 69498980 69498786 ID=cds.MS.gene25900.t1;Parent=MS.gene25900.t1
chr3.2 exon 69500810 69501745 69500810 ID=MS.gene25900.t1.exon5;Parent=MS.gene25900.t1
chr3.2 CDS 69500810 69501745 69500810 ID=cds.MS.gene25900.t1;Parent=MS.gene25900.t1
Gene Sequence

>MS.gene25900

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACCCTTGTCATTGACCTCACCAACAAGCTCCATACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTCTTAGTTCTAGTGGTTTTGATCATGAACCAAAGTACCAGTCTAGTTATAATTAAATATTACATTAATTCTTTGTTGTTAATTACTGTAAAAATGTTTGCAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGGTAATTAATTAATTAATTAATTAAATTTTAGTTCTCTGTTCTATGACCTCTTTTTCTGTTTCCACTGCTACATGTTGATTAATTTGATCACATTTTTGACCCCAAGTGGCATATATGTCCATGCCAGCAATGGTTTTTCTTTTGTTTTTTTGATTACATATTTTATTTTATTTTATAATACTATATAATATAATTAGAGCTAGGTACATATATATATAATATTAACTGGTTGGTGTTAAATATGGTGCAGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGGTATACTTTCAACTTTTCATATATACAAAAATATCATGATCATTCAATTTTTATTTATTTTATTTTATCAAATATTAAAAACAGCTATGTGTACAATAAAAGTTTTTACGTAAAAAAATAATAAAAATTTAAAATAATAATAAAAATATAATATAATTTAACTCGTATACATTGTCCTTGTAAAGAAACTTTTACACTTTCAATCAATAACAATCGTTAGATCTTTAAAAATGTTTGACATTTCTCATTCTTGCATAAGTTATGCTTGAATGTGTTTTTTCTTGTACTCTTAACTAGTTTTAAAGTTGTCATGATCGGTTGAATGTGTAAAACTTCTTAAACTAACATTGAACAAAAATTGAACTCTTAAAATAACTTACTCGTTATACATCTTTAATTTCTTCATTGTAAAATGTTACTTATAAAAAATAAAATTATTTGATATCTAGAACATTTTAAAGCATAATAACTTTTGGCTTATGAATATGATTACGCTAAAGAATTTCATAACTAATTAACATAAGACTTCTTCTCACTATACTTTTCATCATCACCAATGATACTCTTTATTTGTGACATCCACCATATGAGCATTAGTGCTTTCCTTTTTCATATGAATATGATGTCTTTGATCTGTAAACCAGACAATAAAATTCTTGAAAGAAAACAACTCACACTCATGTGGCATAGAAATAAAAATTGAAAATTGGGAAAGAATAAAGAGTCATCTTCCCATTCACCTAATACCTAATAATTCCTAAGAGCATGCACAATGGTAGTTTCCTAACAAGGACTCCTTAAATGGACCCCACATGACACATCACTTATTTATGATTTTTTTAATAAAAGTACCTATTAAGGACTCAATGACTCCAATGACAATACACTAACAAGGACTCCAATGAAAAGTACTTAAATATGTCCCACTATCTTTATATATTAAACAAAAATAATTTATCTATTACCCATTTTTACAAGTGGGACCAAGTAGTACACATTTTATTACTTCTTTATGCAAGTGGGACCAAGTAGTACACATTTTATTACTTTTTTAAACGTGGGACCCGTTAGTTACCCAGGAGAGAGAGGGTCCTTATATAGTTGTCCGTTCTTTAACGGGGACTCAATTTTTCTTCCTCCAATGAAGGGTCCTTAATAGGGAGTGGTCCTTGTTAAGTAAGGACTCCCATTGGAGATGCTCTAATAGTGGCATAGAAAACCTTGCAACTAGGTGGCCCATTTCATCAAATCATCGTTGGAATTTTTCTATAATGGTGAACTCTCGCAGTTGCCACCCCCACTTGTCAATTTTTTTTTTCAACAACACATCTTTCAAGACAATAGAAATATGAACTGGTATTCTTAAAAAAAAAATATGAACTGGTACAAATTTTTCTACTTTTTTTTTTGGACAAATTTTTCTACTTGTATTATACTTATTTTATCTTTTTTTTATAAAAAAATTGTAAGTTAATATGAACTGGTACAAATTTTTTCTTCTTATTTTATCCTTTAAATTTTAATCAAGACAAAAAATTTCAAAAATAAAATAAAGGAAAGCATCGTATTACAGTATAAATATTTAAAATTATAATTTAATCATGGACAGTACCAAGAAAGATAATGGAATAGTATTATTTTTCATTCTTTTGGTAAATGTACAATTGGCCACGCGGTGTTAGCTTTATTTTGACGCAAAAAGAGAAAGACAATCAGAAGAAACGAACAAAAGAAACAGTGTATTTTTCTTAAAATAATTGCATGCGTAACCTTTTATGAATGATAATATAGTATTTGTTTATTTGTTTTTTAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAGTGAGTTTTCTCCTAGCTATGACCCACTACATATATGATATATGTTTGCATTATTTCAATATATATATCGTTGTATTTCTTTCTTATTAATTTATATTATTCTGTCATATTCCAATTAGTTTGTGTGTGTCTATTTTGCATATCATTATTAGGGTTATATCATTATTGCTTCCACATCCAAATATATGCTCATCTCAATTATCACCATTTAGGTAGCTGTCTCATAATTAAGATAGTAGTACTTCATTTCCTTGTTCCCACCAAATAAAATAGGAATCAATTGTCGACATAATAAGGAAGGTTTACTTTTAAGAGGAAATTCCGGAGATTAATAGTCTAATTCATGGAAAACGAATGAAATAATTTAGGAACAGTAGGTGTGTGTTTAAAGCAGCGTAAGAAAAACTTCACTAATAGGTCAAAGAAGTTGGAAAAAATATCTTTGAAAAAATGTTTTAGATATGGAAATCTACGACTTCGTGTGTCCAGCTCAAGTAGCCGTTTAATGTGCAGAATCGTAGGAATTAAAAATTAAGGTTTTGCGTGTCTTAAAACACATGTTAAATTTTACTTCAATACTTTGTAAGAAAAAAACTTTAACTTCAATAGGAACTCCATTTATTCTTTTTTAAATATCATAGTTTTTTTTTTGGTGGCCAGGGTTCGAACCCGAACCTTGTATATATTATGCATTGTCATTACCAACTGAGCTTAACTCACGAGGACTAAATATTGTAGTTTGACTATTTTACATTATTCGTATCTTATTTTAATGATATTATTTTATAAAGCCAAATGTTTGTATAGGAGATGTTCAATTAGTTGTTATATTGGAGGGGGATTCTGATTGATGTACAAATGTTATAAACACTCAGAATTGTCGCATCAATTGTTTTGGTTAAAAATCATTAATTAATATGGCAATTCTGATTGTTTTGATTGGTTGTATTTAAAAAAACAAACATATACATTCAAATAAATGAAGCGGTACCAACAAAAAATAATTCTATAAAGCTGAAAAAACACTAGTCAATTAACCTTTAAATGTGATAATGATGAACGGAGATTTGAATCACATGAGTGGGGATTAGTGAGTTGTCAAACGTGCGACAAAAAATAGTAGATCCAAACCACTTGAAAAAGACGAAGGACCACGTTATGGAGTCCTCGTATAAAATAAGGAAAAGAAAACAACGTTAACTGAGATGCATAGTGATTGGTCGGAGTTGGCATGTGAAACACTGGTTTCTTGATAACTAGGTGCCAAATTTATGTCTATAGAGGGAATCACATCTTGCAGGAATGAAATCTCCCCATTTTATCATACATGCATGCACTTTCATTCAAATCAACAACTGTATTACATAAGTGTACAAAATTCAAATTCGAATTAAATATTGTTTCATTGGTTGGACTCAATTGATTCATGAACTTCACGTTAAATTATTTAGGAAAAGTTGAATTTAAATCTTGGTTGGTTGTTAGATTTTACTTACAATCTGACTATCCAATTATGGGGACCAAATTGGATTGGGTGTGCTCAAAGCACCATGGTTTGTTAGATCAACATGAGACAATATGTTTTTCAACTTTACCAAATAACATTTTTAATAAAACTTAAAATAGTGATTGTTTGATCTTGATCTAACGACCAAGATATTCTAAATCTAAATGCATGATGCTTTGGGAGTAGTCACTGATTTTGATAAATTTTCACATAAAACCTACTGCTGATTATTGCATTTCTCCATATCATTCCTTGAATTGCACCATAGATTGATTCATTATTTCATGAAATAACATTGCCCCATAATTTCTGTTTGTTTCAGAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>MS.gene25900.t1

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA