AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25899

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25899.t1 MTR_3g078730 88.811 572 37 1 1 572 1 545 0.0 1030
MS.gene25899.t1 MTR_3g078740 78.020 596 106 3 1 572 1 595 0.0 966
MS.gene25899.t1 MTR_3g078700 79.682 566 87 2 1 565 1 539 0.0 933
MS.gene25899.t1 MTR_8g091390 50.714 560 258 6 17 569 26 574 0.0 576
MS.gene25899.t1 MTR_5g020620 32.332 566 327 17 1 544 8 539 7.18e-76 251
MS.gene25899.t1 MTR_7g062250 32.143 560 309 16 18 540 27 552 1.34e-71 240
MS.gene25899.t1 MTR_5g083360 30.849 577 334 19 1 544 1 545 3.47e-71 239
MS.gene25899.t1 MTR_5g069680 32.668 551 320 16 16 545 17 537 2.19e-69 234
MS.gene25899.t1 MTR_5g020600 30.810 568 337 17 2 545 10 545 4.17e-69 233
MS.gene25899.t1 MTR_7g058690 31.041 567 336 14 7 542 14 556 4.31e-69 234
MS.gene25899.t1 MTR_7g458880 31.173 571 332 17 4 540 11 554 8.04e-69 233
MS.gene25899.t1 MTR_7g060460 30.823 571 340 15 2 540 8 555 1.33e-67 229
MS.gene25899.t1 MTR_4g064530 31.973 588 311 26 3 540 11 559 3.30e-67 229
MS.gene25899.t1 MTR_3g462760 32.468 539 321 15 22 544 23 534 1.09e-66 226
MS.gene25899.t1 MTR_2g008330 31.349 571 326 20 6 544 21 557 2.87e-66 226
MS.gene25899.t1 MTR_3g101635 30.435 575 336 18 1 544 3 544 8.49e-66 224
MS.gene25899.t1 MTR_4g015120 30.952 546 329 16 19 544 18 535 2.08e-65 223
MS.gene25899.t1 MTR_7g062310 31.469 572 325 17 21 555 43 584 8.83e-65 223
MS.gene25899.t1 MTR_5g073210 30.906 563 336 20 4 541 1 535 1.72e-64 221
MS.gene25899.t1 MTR_3g101640 31.034 580 333 21 1 544 1 549 2.83e-64 221
MS.gene25899.t1 MTR_5g081810 30.916 524 321 11 36 544 10 507 1.24e-63 218
MS.gene25899.t1 MTR_4g064530 31.315 578 308 26 3 530 11 549 1.87e-60 210
MS.gene25899.t1 MTR_3g071890 30.532 583 329 23 2 552 12 550 2.08e-60 210
MS.gene25899.t1 MTR_8g027375 29.749 558 312 21 25 544 34 549 1.01e-58 206
MS.gene25899.t1 MTR_7g065980 28.308 597 350 24 7 562 3 562 1.74e-54 194
MS.gene25899.t1 MTR_8g479390 28.905 557 330 19 25 565 31 537 1.34e-53 191
MS.gene25899.t1 MTR_7g065970 27.496 571 330 22 18 544 18 548 9.31e-53 189
MS.gene25899.t1 MTR_4g019225 27.828 557 335 18 24 544 25 550 6.96e-52 187
MS.gene25899.t1 MTR_5g018270 29.084 557 320 18 25 562 31 531 1.52e-49 180
MS.gene25899.t1 MTR_3g079660 77.320 97 22 0 476 572 5 101 1.05e-48 164
MS.gene25899.t1 MTR_3g083390 27.402 562 342 18 26 567 26 541 1.30e-48 177
MS.gene25899.t1 MTR_3g083440 27.402 562 342 18 26 567 26 541 1.43e-48 177
MS.gene25899.t1 MTR_3g083450 27.402 562 342 18 26 567 27 542 3.85e-48 176
MS.gene25899.t1 MTR_8g479380 27.941 544 310 21 48 567 52 537 4.23e-48 176
MS.gene25899.t1 MTR_4g101650 28.007 557 345 17 27 562 29 550 4.77e-48 177
MS.gene25899.t1 MTR_3g083400 27.402 562 342 18 26 567 26 541 5.65e-48 176
MS.gene25899.t1 MTR_3g083430 27.224 562 343 18 26 567 26 541 1.75e-47 174
MS.gene25899.t1 MTR_3g083410 27.593 540 325 18 48 567 12 505 7.32e-47 172
MS.gene25899.t1 MTR_4g049390 28.036 560 326 17 25 562 27 531 1.04e-46 172
MS.gene25899.t1 MTR_3g008580 27.223 551 337 16 37 562 41 552 3.12e-46 172
MS.gene25899.t1 MTR_4g083190 26.072 583 363 20 7 567 7 543 7.38e-46 170
MS.gene25899.t1 MTR_4g048350 26.978 556 336 15 25 562 27 530 1.13e-45 169
MS.gene25899.t1 MTR_4g132320 27.336 578 338 19 14 565 17 538 9.79e-45 167
MS.gene25899.t1 MTR_1g090707 26.577 523 301 15 44 539 43 509 1.84e-44 167
MS.gene25899.t1 MTR_4g075690 26.476 559 335 16 25 562 30 533 4.97e-44 164
MS.gene25899.t1 MTR_2g088080 27.562 566 321 21 25 562 30 534 1.49e-43 163
MS.gene25899.t1 MTR_7g051440 27.622 572 349 23 26 573 30 560 2.00e-43 164
MS.gene25899.t1 MTR_3g115050 25.880 568 354 16 16 565 19 537 2.15e-43 163
MS.gene25899.t1 MTR_4g083210 26.937 568 333 20 26 567 26 537 8.35e-43 161
MS.gene25899.t1 MTR_1g026410 26.241 564 340 20 25 566 29 538 5.87e-41 156
MS.gene25899.t1 MTR_4g075690 26.271 472 278 14 25 480 30 447 4.78e-34 134
MS.gene25899.t1 MTR_2g088080 26.953 512 286 20 79 562 2 453 9.18e-34 134
MS.gene25899.t1 MTR_2g009230 88.525 61 7 0 130 190 1 61 6.02e-33 121
MS.gene25899.t1 MTR_5g081790 37.589 141 84 2 385 524 283 420 1.30e-18 89.0
MS.gene25899.t1 MTR_5g081790 35.417 144 83 4 6 142 7 147 3.96e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25899.t1 AT5G21105 64.386 570 199 2 9 574 19 588 0.0 788
MS.gene25899.t1 AT5G21105 64.808 520 179 2 9 524 19 538 0.0 716
MS.gene25899.t1 AT5G21100 60.932 558 210 5 17 570 16 569 0.0 712
MS.gene25899.t1 AT4G39830 49.911 563 257 8 19 566 30 582 0.0 577
MS.gene25899.t1 AT5G21105 64.083 387 138 1 189 574 11 397 0.0 533
MS.gene25899.t1 AT4G39830 49.697 495 224 8 87 566 3 487 1.21e-169 491
MS.gene25899.t1 AT4G39830 49.595 494 224 8 88 566 2 485 8.44e-169 488
MS.gene25899.t1 AT4G39830 47.475 495 222 9 87 566 3 474 6.35e-156 455
MS.gene25899.t1 AT5G03260 32.904 544 313 17 22 544 23 535 3.89e-70 236
MS.gene25899.t1 AT5G05390 29.879 579 335 18 1 544 1 543 7.51e-70 235
MS.gene25899.t1 AT5G09360 31.930 570 325 20 2 544 14 547 1.22e-67 229
MS.gene25899.t1 AT5G58910 31.341 552 313 19 24 544 29 545 4.88e-67 228
MS.gene25899.t1 AT5G58910 31.341 552 312 20 24 544 29 544 2.17e-65 223
MS.gene25899.t1 AT5G48100 30.373 563 328 17 14 544 11 541 1.82e-64 221
MS.gene25899.t1 AT2G29130 32.281 570 328 19 1 540 6 547 2.65e-64 221
MS.gene25899.t1 AT5G01050 30.298 571 324 21 11 544 13 546 6.73e-64 220
MS.gene25899.t1 AT2G30210 31.066 544 298 19 40 544 43 548 8.76e-64 219
MS.gene25899.t1 AT3G09220 30.195 563 333 19 12 544 13 545 1.03e-63 219
MS.gene25899.t1 AT5G07130 31.041 567 333 18 10 544 7 547 1.71e-63 218
MS.gene25899.t1 AT2G40370 29.734 602 341 22 7 559 9 577 6.53e-62 214
MS.gene25899.t1 AT5G01040 29.474 570 328 18 11 544 13 544 9.60e-62 214
MS.gene25899.t1 AT1G18140 29.983 587 325 21 20 559 24 571 1.81e-60 211
MS.gene25899.t1 AT2G38080 30.442 565 332 20 8 544 5 536 3.54e-60 209
MS.gene25899.t1 AT5G60020 29.352 586 331 19 1 540 3 551 3.01e-58 204
MS.gene25899.t1 AT5G01190 29.443 557 347 15 7 544 7 536 3.32e-57 201
MS.gene25899.t1 AT2G46570 28.520 554 330 20 22 544 29 547 8.87e-57 200
MS.gene25899.t1 AT5G58910 30.224 536 301 20 40 544 8 501 1.08e-56 199
MS.gene25899.t1 AT5G60020 30.129 541 309 19 40 540 8 519 3.51e-55 195
MS.gene25899.t1 AT5G01190 30.636 519 314 15 45 544 31 522 2.44e-54 193
MS.gene25899.t1 AT5G60020 29.078 564 329 20 1 524 3 535 2.64e-51 185
MS.gene25899.t1 AT4G12420 26.441 590 374 18 1 567 1 553 2.97e-50 183
MS.gene25899.t1 AT4G12420 26.441 590 374 18 1 567 1 553 2.97e-50 183
MS.gene25899.t1 AT1G55570 28.826 562 325 21 26 562 30 541 1.07e-49 181
MS.gene25899.t1 AT1G75790 27.634 579 343 20 12 562 12 542 1.07e-49 180
MS.gene25899.t1 AT4G22010 28.464 534 309 17 25 540 26 504 3.67e-49 179
MS.gene25899.t1 AT5G66920 26.975 519 317 14 25 532 37 504 7.38e-48 175
MS.gene25899.t1 AT1G21860 26.655 574 342 17 16 565 16 534 8.14e-46 169
MS.gene25899.t1 AT5G07130 30.165 484 283 16 91 544 4 462 1.84e-45 167
MS.gene25899.t1 AT5G07130 30.165 484 283 16 91 544 4 462 1.84e-45 167
MS.gene25899.t1 AT1G21850 26.850 581 351 19 4 562 3 531 2.72e-45 168
MS.gene25899.t1 AT3G13390 28.470 562 327 22 26 562 29 540 3.90e-45 168
MS.gene25899.t1 AT4G25240 26.871 588 371 19 2 567 6 556 6.20e-45 168
MS.gene25899.t1 AT4G25240 26.871 588 371 19 2 567 6 556 6.20e-45 168
MS.gene25899.t1 AT5G51480 27.305 564 350 21 27 567 30 556 8.83e-45 167
MS.gene25899.t1 AT4G37160 25.760 559 344 18 27 566 33 539 5.20e-44 164
MS.gene25899.t1 AT4G28090 27.863 585 339 21 9 565 9 538 2.29e-43 163
MS.gene25899.t1 AT3G09220 28.992 476 279 18 99 544 2 448 4.65e-43 160
MS.gene25899.t1 AT2G46570 27.789 493 291 19 83 544 4 462 5.59e-43 160
MS.gene25899.t1 AT5G48450 25.880 568 360 16 20 567 22 548 8.90e-43 162
MS.gene25899.t1 AT5G48450 25.880 568 360 16 20 567 22 548 9.61e-43 162
MS.gene25899.t1 AT2G23630 27.158 556 331 20 27 562 37 538 1.48e-42 160
MS.gene25899.t1 AT2G23630 27.158 556 331 20 27 562 32 533 1.73e-42 160
MS.gene25899.t1 AT1G76160 25.312 561 345 16 25 565 28 534 3.63e-41 157
MS.gene25899.t1 AT1G41830 23.878 557 352 14 25 562 29 532 3.08e-38 148
MS.gene25899.t1 AT3G13400 25.540 556 350 17 26 562 28 538 5.24e-35 139
MS.gene25899.t1 AT3G13400 25.540 556 350 17 26 562 28 538 5.24e-35 139
MS.gene25899.t1 AT4G38420 24.382 566 351 20 25 565 30 543 9.09e-35 138
MS.gene25899.t1 AT1G55560 25.225 555 347 19 29 562 30 537 7.14e-34 135
MS.gene25899.t1 AT4G37160 25.855 468 282 15 27 480 33 449 6.53e-33 131
MS.gene25899.t1 AT4G38420 24.206 504 310 18 25 508 30 481 5.12e-27 115
MS.gene25899.t1 AT4G38420 24.313 473 293 16 25 480 30 454 5.17e-26 111

Find 144 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAGGGTGTTCATAAAAT+TGG 0.125745 3.2:+69515902 MS.gene25899:CDS
AAATCGGTAATTTCACTAAA+TGG 0.144709 3.2:+69515399 MS.gene25899:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.2:+69515805 MS.gene25899:CDS
CTCAGTTGTGGGTGTTGTTT+AGG 0.244247 3.2:-69515973 None:intergenic
TGTCTGTGGTGTTCCCATTC+TGG 0.244260 3.2:-69515330 None:intergenic
TATTATAGTTAAGGATTGTT+AGG 0.255819 3.2:-69515211 None:intergenic
TTTGTTTGGTATATATGGTT+AGG 0.274547 3.2:+69510262 MS.gene25899:CDS
CTTATGGTTGGACTGCATTA+AGG 0.292432 3.2:+69515798 MS.gene25899:CDS
GCTCCTAAGTAAGGTGTTAT+TGG 0.293518 3.2:-69515449 None:intergenic
GTTGTTGTACTTGGATTAAC+TGG 0.303304 3.2:-69515554 None:intergenic
ACTGCAGTTATATTTCCTTA+TGG 0.308341 3.2:+69515782 MS.gene25899:CDS
TGGCGCTACTTCGAGAATCT+TGG 0.314451 3.2:-69514360 None:intergenic
CGATTGAGAGCCAGTAGTTT+TGG 0.320504 3.2:-69515154 None:intergenic
AGGCAGACAACCCAGGTGTT+TGG 0.321257 3.2:+69515825 MS.gene25899:CDS
CCGTTACCTGTTGTTGTACT+TGG 0.322170 3.2:-69515563 None:intergenic
CACCACCAACCACTCCCTTA+TGG 0.327899 3.2:+69515264 MS.gene25899:CDS
GGCAGACAACCCAGGTGTTT+GGG 0.341272 3.2:+69515826 MS.gene25899:CDS
CAGGGTTTGTATTATAGTTA+AGG 0.342158 3.2:-69515220 None:intergenic
GTTCACCAACCCATCTCATT+GGG 0.342539 3.2:-69511880 None:intergenic
CTGAGGGTGTTCATAAAATT+GGG 0.343862 3.2:+69515903 MS.gene25899:CDS
AATGGCTCGCTTTGGTTGTT+TGG 0.353112 3.2:-69511773 None:intergenic
GTGGTTGGTGGTGGTAATAT+AGG 0.368028 3.2:-69515254 None:intergenic
CATTGAACCACATTTGCATC+TGG 0.368806 3.2:+69515862 MS.gene25899:CDS
GGAATCAATGGTCAGTTTCC+TGG 0.370438 3.2:+69510379 MS.gene25899:CDS
TTAAATATGTCGAAATCAAA+TGG 0.374923 3.2:-69515527 None:intergenic
TTGTTTGGTATATATGGTTA+GGG 0.388048 3.2:+69510263 MS.gene25899:CDS
TCCTTCTGTAGAGAGCTTGT+TGG 0.390891 3.2:-69510449 None:intergenic
GGCGCTACTTCGAGAATCTT+GGG 0.392401 3.2:-69514359 None:intergenic
CTCAACACACAAAGCAAAAT+CGG 0.395873 3.2:+69515383 MS.gene25899:CDS
AATCGGTAATTTCACTAAAT+GGG 0.402093 3.2:+69515400 MS.gene25899:CDS
AGGTGTTATTGGCAATGTTA+AGG 0.403860 3.2:-69515438 None:intergenic
TATTTGATTGCTCCTAAGTA+AGG 0.405813 3.2:-69515458 None:intergenic
TATTTCTATCATGGACACTA+TGG 0.409360 3.2:+69511704 MS.gene25899:CDS
CTTTGAAATTGCATTGAGGC+AGG 0.417474 3.2:-69514319 None:intergenic
TTTGTAGATTGGAACTCCTT+GGG 0.426712 3.2:+69511397 MS.gene25899:intron
TGGTTGGTGGTGGTAATATA+GGG 0.426994 3.2:-69515253 None:intergenic
CAATGAAATGCCCAAACACC+TGG 0.427269 3.2:-69515836 None:intergenic
CTCTTCAGCCCCAATGAGAT+GGG 0.429001 3.2:+69511871 MS.gene25899:CDS
AAATCAAATGGGAATCTATC+TGG 0.430172 3.2:-69515515 None:intergenic
CTGTAATGAAAAGTTTCTCC+TGG 0.432582 3.2:-69511458 None:intergenic
CATAATGAAATGGCTCGCTT+TGG 0.432881 3.2:-69511781 None:intergenic
AACTCACCATCATAATGAAA+TGG 0.432896 3.2:-69511791 None:intergenic
GGTTCACCAACCCATCTCAT+TGG 0.433465 3.2:-69511881 None:intergenic
ATTTGACACGTGCACCTTTG+AGG 0.440703 3.2:+69515756 MS.gene25899:CDS
AGCGAGCCATTTCATTATGA+TGG 0.443509 3.2:+69511785 MS.gene25899:CDS
CAGAGAGCAGCAGGGTTGTA+TGG 0.444015 3.2:+69511731 MS.gene25899:CDS
GATCTTGGTCCGTGTGTAGA+AGG 0.444511 3.2:-69515127 None:intergenic
CCAACTTCAGCTCTAATAGT+TGG 0.449801 3.2:-69510403 None:intergenic
ATTACAGATTCATTGTTGAC+AGG 0.449902 3.2:+69511474 MS.gene25899:CDS
CAGTTATATTTCCTTATGGT+TGG 0.450961 3.2:+69515786 MS.gene25899:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.452079 3.2:+69511870 MS.gene25899:CDS
AAACAAATCATTTCCAGAAT+GGG 0.453424 3.2:+69515317 MS.gene25899:CDS
ATTATAGTTAAGGATTGTTA+GGG 0.461154 3.2:-69515210 None:intergenic
ATTGGAACTCCTTGGGCTGA+TGG 0.463869 3.2:+69511404 MS.gene25899:CDS
GGTGTTGTTTAGGAACATCT+TGG 0.466856 3.2:-69515963 None:intergenic
GTTAATCCAAGTACAACAAC+AGG 0.471363 3.2:+69515557 MS.gene25899:CDS
TTAAGGATTGTTAGGGCTTG+TGG 0.473400 3.2:-69515203 None:intergenic
CCTGGTACATATTTCTATCA+TGG 0.478578 3.2:+69511695 MS.gene25899:CDS
AAAACAAATCATTTCCAGAA+TGG 0.478795 3.2:+69515316 MS.gene25899:CDS
CAAAACTACTGGCTCTCAAT+CGG 0.478813 3.2:+69515155 MS.gene25899:CDS
TATGGCATGCAGAGAGCAGC+AGG 0.482439 3.2:+69511722 MS.gene25899:CDS
CTTAATGCAGTCCAACCATA+AGG 0.485250 3.2:-69515797 None:intergenic
ACCACATTTGCATCTGGGAA+TGG 0.487721 3.2:+69515868 MS.gene25899:CDS
TAAATATGTCGAAATCAAAT+GGG 0.488708 3.2:-69515526 None:intergenic
TCTATGCTATCAACCGTGAA+TGG 0.489752 3.2:-69515077 None:intergenic
CGCTCGAAATCGTTCCATAA+GGG 0.490554 3.2:-69515278 None:intergenic
ACAACATGCTCTATGCAATC+TGG 0.490800 3.2:-69510352 None:intergenic
CAACTTCAGCTCTAATAGTT+GGG 0.494195 3.2:-69510402 None:intergenic
AATATAGGGAAAGTTGAGGC+AGG 0.496705 3.2:-69515239 None:intergenic
GCGCTCGAAATCGTTCCATA+AGG 0.499345 3.2:-69515279 None:intergenic
AGCTTAGCTAGTCTCAGTTG+TGG 0.500207 3.2:-69515985 None:intergenic
AAACTACGTGCACCCATTCA+CGG 0.502338 3.2:+69515064 MS.gene25899:CDS
TTCCATAAGGGAGTGGTTGG+TGG 0.505523 3.2:-69515266 None:intergenic
GTCCTTAGCTTCTCTCAACT+TGG 0.508173 3.2:+69514418 MS.gene25899:CDS
TTGCCAATAACACCTTACTT+AGG 0.510406 3.2:+69515446 MS.gene25899:CDS
GCTTAGCTAGTCTCAGTTGT+GGG 0.510640 3.2:-69515984 None:intergenic
ACTTGCAATCCTAATTCTGT+AGG 0.513702 3.2:-69514390 None:intergenic
CTGTAGAGAGCTTGTTGGTG+AGG 0.522573 3.2:-69510444 None:intergenic
TGTTCACGAAATTAGCTGCT+AGG 0.529978 3.2:-69514292 None:intergenic
CAGAAGGAACTGTTATTCAC+TGG 0.532868 3.2:+69510464 MS.gene25899:CDS
AAGATCCCAACCAAAACTAC+TGG 0.534040 3.2:+69515144 MS.gene25899:CDS
CATAAGGGAGTGGTTGGTGG+TGG 0.534898 3.2:-69515263 None:intergenic
CCACATTTGCATCTGGGAAT+GGG 0.538253 3.2:+69515869 MS.gene25899:CDS
ATTGAACCACATTTGCATCT+GGG 0.538898 3.2:+69515863 MS.gene25899:CDS
CCCATTCCCAGATGCAAATG+TGG 0.540042 3.2:-69515869 None:intergenic
AGCTTGCTCATCAATGGAAG+AGG 0.544734 3.2:+69514254 MS.gene25899:CDS
GGCCAAGTTGAGAGAAGCTA+AGG 0.545213 3.2:-69514420 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.2:+69511440 MS.gene25899:CDS
GTTCATCCATGGCATTTGCA+TGG 0.550858 3.2:+69515665 MS.gene25899:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.2:+69510469 MS.gene25899:CDS
TCAGCTCTAATAGTTGGGCC+AGG 0.557489 3.2:-69510397 None:intergenic
GTTCACGAAATTAGCTGCTA+GGG 0.560510 3.2:-69514291 None:intergenic
TTACAGATTCATTGTTGACA+GGG 0.563984 3.2:+69511475 MS.gene25899:CDS
AGGTTTAAGGCAGACAACCC+AGG 0.566878 3.2:+69515818 MS.gene25899:CDS
TCAGCCCCAATGAGATGGGT+TGG 0.567659 3.2:+69511875 MS.gene25899:CDS
AATGGGAATCTATCTGGTGG+TGG 0.568086 3.2:-69515509 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.2:-69511695 None:intergenic
CTATGCTATCAACCGTGAAT+GGG 0.572088 3.2:-69515076 None:intergenic
CCAACTATTAGAGCTGAAGT+TGG 0.572309 3.2:+69510403 MS.gene25899:CDS
CTGCCTCAATGCAATTTCAA+AGG 0.573833 3.2:+69514320 MS.gene25899:CDS
CTTGTTGTGGTGGAAGCAGA+TGG 0.578406 3.2:+69515041 MS.gene25899:CDS
CATGTTGTGATGGGAATCAA+TGG 0.578474 3.2:+69510367 MS.gene25899:CDS
TTACACGTTTCACTTAAATG+AGG 0.579316 3.2:+69515589 MS.gene25899:CDS
TTGCATAGAGCATGTTGTGA+TGG 0.579841 3.2:+69510357 MS.gene25899:CDS
GAAACATTACAAGTTTGATG+TGG 0.579860 3.2:+69510312 MS.gene25899:CDS
CATCTGCTTCCACCACAACA+AGG 0.580093 3.2:-69515040 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.2:-69511868 None:intergenic
ATCTGCTCCTCAGTGATCTG+TGG 0.584818 3.2:+69511816 MS.gene25899:CDS
GAGATGGGTTGGTGAACCAC+AGG 0.584866 3.2:+69511886 MS.gene25899:CDS
ATATAGGGAAAGTTGAGGCA+GGG 0.586056 3.2:-69515238 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.2:-69515770 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.2:+69510480 MS.gene25899:CDS
TCGTTCCATAAGGGAGTGGT+TGG 0.590609 3.2:-69515269 None:intergenic
CACAAGTTCACAAGAACAAG+AGG 0.595059 3.2:+69511841 MS.gene25899:CDS
TGCATAGAGCATGTTGTGAT+GGG 0.595383 3.2:+69510358 MS.gene25899:CDS
CCACCTTTGAAATTGCATTG+AGG 0.597277 3.2:-69514323 None:intergenic
CCAAGTACAACAACAGGTAA+CGG 0.597406 3.2:+69515563 MS.gene25899:CDS
ACCAACAAGCTCTCTACAGA+AGG 0.601317 3.2:+69510448 MS.gene25899:CDS
TTTGAAATTGCATTGAGGCA+GGG 0.606053 3.2:-69514318 None:intergenic
CCTCAATGCAATTTCAAAGG+TGG 0.612230 3.2:+69514323 MS.gene25899:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.2:-69515671 None:intergenic
CCTACACATGCTCTTACTTG+TGG 0.613192 3.2:+69515932 MS.gene25899:CDS
GAATCACACCCTTGTTGTGG+TGG 0.615258 3.2:+69515031 MS.gene25899:intron
TTCACCAACCCATCTCATTG+GGG 0.616416 3.2:-69511879 None:intergenic
AGTTCACAAGAACAAGAGGT+TGG 0.621180 3.2:+69511845 MS.gene25899:CDS
GAAATCGTTCCATAAGGGAG+TGG 0.627108 3.2:-69515273 None:intergenic
ATACTAGTGAAGTTCATCCA+TGG 0.627356 3.2:+69515654 MS.gene25899:CDS
CTACTCAGTCCTTCTACACA+CGG 0.628943 3.2:+69515118 MS.gene25899:CDS
GATAGCATAGACATCTACTC+AGG 0.642343 3.2:+69515089 MS.gene25899:CDS
GCTTGCTCATCAATGGAAGA+GGG 0.643075 3.2:+69514255 MS.gene25899:CDS
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.2:-69511413 None:intergenic
ATCTGCTTCCACCACAACAA+GGG 0.647563 3.2:-69515039 None:intergenic
GTAGAATCACACCCTTGTTG+TGG 0.648768 3.2:+69515028 MS.gene25899:intron
CGTGTGTAGAAGGACTGAGT+AGG 0.651575 3.2:-69515117 None:intergenic
TCAAATGGGAATCTATCTGG+TGG 0.659562 3.2:-69515512 None:intergenic
TGGTAATATAGGGAAAGTTG+AGG 0.684103 3.2:-69515243 None:intergenic
AATGAAATGCCCAAACACCT+GGG 0.687450 3.2:-69515835 None:intergenic
CCACAAGTAAGAGCATGTGT+AGG 0.697143 3.2:-69515932 None:intergenic
GAAATTGCATTGAGGCAGGG+TGG 0.703546 3.2:-69514315 None:intergenic
ATGGCATGCAGAGAGCAGCA+GGG 0.712589 3.2:+69511723 MS.gene25899:CDS
GTTGGTGAGGTCAATGACAA+CGG 0.719426 3.2:-69510431 None:intergenic
TGTTGAGGAGGTAAATTGTG+CGG 0.723525 3.2:-69515367 None:intergenic
GGTGAAGGGAAATTTCAACC+AGG 0.727102 3.2:+69515713 MS.gene25899:CDS
TTGTGTGCCACAGATCACTG+AGG 0.796939 3.2:-69511823 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAGTTATAAAAAGTTTA+GGG - chr3.2:69512559-69512578 None:intergenic 10.0%
!! TAATTAGTTATAAAAAGTTT+AGG - chr3.2:69512560-69512579 None:intergenic 10.0%
!! AAAACAACAAAAAATGTATA+AGG - chr3.2:69511327-69511346 None:intergenic 15.0%
!! AGTATTATAACAATCTAAAT+TGG - chr3.2:69513433-69513452 None:intergenic 15.0%
!! CATTACAAAATAATCTTAAA+CGG - chr3.2:69514727-69514746 None:intergenic 15.0%
!! TACTATATATTGAGTATATA+TGG + chr3.2:69512706-69512725 MS.gene25899:intron 15.0%
!! TTTATATTATTAATCTGAAC+TGG + chr3.2:69513948-69513967 MS.gene25899:intron 15.0%
!! TTTCCTTTATTAAAAGTTAA+AGG - chr3.2:69514002-69514021 None:intergenic 15.0%
!!! AATAATAATGTTTTGTAGAT+TGG + chr3.2:69511386-69511405 MS.gene25899:intron 15.0%
!!! ACCAAAAACATTATTTTATA+GGG - chr3.2:69512637-69512656 None:intergenic 15.0%
!!! GTTTAAGATTATTTTGTAAT+GGG + chr3.2:69514726-69514745 MS.gene25899:intron 15.0%
!!! TACATTTTTTGTTGTTTTTT+TGG + chr3.2:69511329-69511348 MS.gene25899:intron 15.0%
!!! TACCAAAAACATTATTTTAT+AGG - chr3.2:69512638-69512657 None:intergenic 15.0%
!!! TATCCTTTAACTTTTAATAA+AGG + chr3.2:69513996-69514015 MS.gene25899:intron 15.0%
!!! TCATTGTTAATAAGTTATTT+TGG + chr3.2:69513235-69513254 MS.gene25899:intron 15.0%
!!! TTTAAGATTATTTTGTAATG+GGG + chr3.2:69514727-69514746 MS.gene25899:intron 15.0%
!! AAAAAAGTCATCATAATGTA+TGG - chr3.2:69514232-69514251 None:intergenic 20.0%
!! AAAAGTTAAAGGATAAACTA+AGG - chr3.2:69513991-69514010 None:intergenic 20.0%
!! AATGCAAATATATATCTAGT+AGG - chr3.2:69514481-69514500 None:intergenic 20.0%
!! ACAATGCATTATTATATGTA+GGG + chr3.2:69513540-69513559 MS.gene25899:intron 20.0%
!! AGGAAATAAAAATGATATCT+AGG + chr3.2:69510851-69510870 MS.gene25899:intron 20.0%
!! AGTATTATAACAACATAGAT+TGG - chr3.2:69512348-69512367 None:intergenic 20.0%
!! ATATATATGATATTAACGTG+TGG + chr3.2:69511651-69511670 MS.gene25899:intron 20.0%
!! ATTATAGTTAAGGATTGTTA+GGG - chr3.2:69515213-69515232 None:intergenic 20.0%
!! ATTGTGTATAAAAAAATGGT+TGG + chr3.2:69514659-69514678 MS.gene25899:intron 20.0%
!! CCAAATAAAGTATATATTTG+AGG - chr3.2:69514790-69514809 None:intergenic 20.0%
!! CCATAAGATTAATTTAATCA+TGG + chr3.2:69514128-69514147 MS.gene25899:intron 20.0%
!! CCATGATTAAATTAATCTTA+TGG - chr3.2:69514131-69514150 None:intergenic 20.0%
!! CCTCAAATATATACTTTATT+TGG + chr3.2:69514787-69514806 MS.gene25899:intron 20.0%
!! GAAAAAGAAAATATTACAAG+TGG - chr3.2:69513841-69513860 None:intergenic 20.0%
!! GATTAATTTAATCATGGATA+TGG + chr3.2:69514134-69514153 MS.gene25899:intron 20.0%
!! GGAAATAAAAATGATATCTA+GGG + chr3.2:69510852-69510871 MS.gene25899:intron 20.0%
!! GTAAATATTCATAAAGATGA+AGG + chr3.2:69510828-69510847 MS.gene25899:intron 20.0%
!! TAAATATGTCGAAATCAAAT+GGG - chr3.2:69515529-69515548 None:intergenic 20.0%
!! TAACTTATTAACAATGAGTA+TGG - chr3.2:69513232-69513251 None:intergenic 20.0%
!! TATATATGATATTAACGTGT+GGG + chr3.2:69511652-69511671 MS.gene25899:intron 20.0%
!! TATTATAGTTAAGGATTGTT+AGG - chr3.2:69515214-69515233 None:intergenic 20.0%
!! TTAAATATGTCGAAATCAAA+TGG - chr3.2:69515530-69515549 None:intergenic 20.0%
!!! AAAATAATGTTTTTGGTACT+TGG + chr3.2:69512640-69512659 MS.gene25899:intron 20.0%
!!! AATGTGTTATTTTTTTGATC+AGG - chr3.2:69513632-69513651 None:intergenic 20.0%
!!! CGTTTAAGATTATTTTGTAA+TGG + chr3.2:69514725-69514744 MS.gene25899:intron 20.0%
!!! CTTTGAACTTTTTTAGAAAT+TGG - chr3.2:69511258-69511277 None:intergenic 20.0%
!!! GACTTTTTGTAGTTTTAATT+TGG - chr3.2:69512179-69512198 None:intergenic 20.0%
!!! GTTTGTAAAAAGTTTTCTTA+TGG + chr3.2:69511153-69511172 MS.gene25899:intron 20.0%
!!! TCCCTATAAAATAATGTTTT+TGG + chr3.2:69512633-69512652 MS.gene25899:intron 20.0%
!!! TTAATCGCATACTTTTTTTT+TGG - chr3.2:69513658-69513677 None:intergenic 20.0%
!!! TTTTTTGTTGTTTTTTTGGT+AGG + chr3.2:69511333-69511352 MS.gene25899:intron 20.0%
! AAAACAAATCATTTCCAGAA+TGG + chr3.2:69515316-69515335 MS.gene25899:CDS 25.0%
! AAACAAATCATTTCCAGAAT+GGG + chr3.2:69515317-69515336 MS.gene25899:CDS 25.0%
! AAAGAAAATATTACAAGTGG+AGG - chr3.2:69513838-69513857 None:intergenic 25.0%
! AAATCGGTAATTTCACTAAA+TGG + chr3.2:69515399-69515418 MS.gene25899:CDS 25.0%
! AAATTACAAAACGTTTAGAG+AGG - chr3.2:69512595-69512614 None:intergenic 25.0%
! AATATTCATAAAGATGAAGG+AGG + chr3.2:69510831-69510850 MS.gene25899:intron 25.0%
! AATCGGTAATTTCACTAAAT+GGG + chr3.2:69515400-69515419 MS.gene25899:CDS 25.0%
! AGATCAAAAACTTACTGAAA+TGG - chr3.2:69514444-69514463 None:intergenic 25.0%
! CAAAAAAAACCTACAGAATT+AGG + chr3.2:69514381-69514400 MS.gene25899:CDS 25.0%
! CAATGCATTATTATATGTAG+GGG + chr3.2:69513541-69513560 MS.gene25899:intron 25.0%
! CAATTAACATTGTACCAAAA+AGG + chr3.2:69513491-69513510 MS.gene25899:intron 25.0%
! CTCGATTGTGTATAAAAAAA+TGG + chr3.2:69514655-69514674 MS.gene25899:intron 25.0%
! GACAATGCATTATTATATGT+AGG + chr3.2:69513539-69513558 MS.gene25899:intron 25.0%
! GGAAAAAAATGTCATTCATA+AGG - chr3.2:69514202-69514221 None:intergenic 25.0%
! TCTACATGACACAAAAATTA+TGG - chr3.2:69515013-69515032 None:intergenic 25.0%
! TTCATCGATAAAATCAGTTT+AGG - chr3.2:69514935-69514954 None:intergenic 25.0%
! TTGTTTGGTATATATGGTTA+GGG + chr3.2:69510263-69510282 MS.gene25899:CDS 25.0%
! TTTAGAAATTGGTCATAGAT+TGG - chr3.2:69511247-69511266 None:intergenic 25.0%
! TTTGTTTGGTATATATGGTT+AGG + chr3.2:69510262-69510281 MS.gene25899:CDS 25.0%
!! GAAAAAAGACAATGTTGTTT+AGG - chr3.2:69514162-69514181 None:intergenic 25.0%
!! GATTTAAAGCAAAGCATTAT+TGG - chr3.2:69513411-69513430 None:intergenic 25.0%
!!! AATGAGATAGTGATTTTTAG+AGG - chr3.2:69513755-69513774 None:intergenic 25.0%
!!! ACTCACTTTAAGATTCAATT+TGG - chr3.2:69513791-69513810 None:intergenic 25.0%
!!! AGTTTTAATTTGGATCGATT+TGG - chr3.2:69512169-69512188 None:intergenic 25.0%
!!! ATAAGTTATTTTGGTCCATA+TGG + chr3.2:69513244-69513263 MS.gene25899:intron 25.0%
!!! ATGTTTTAGATGGTATCAAT+TGG + chr3.2:69512835-69512854 MS.gene25899:intron 25.0%
!!! CATTTTTTTATACACAATCG+AGG - chr3.2:69514657-69514676 None:intergenic 25.0%
!!! CTAATTCTGTAGGTTTTTTT+TGG - chr3.2:69514383-69514402 None:intergenic 25.0%
!!! CTGTTTTTGTTTGGTATATA+TGG + chr3.2:69510257-69510276 MS.gene25899:CDS 25.0%
!!! TGTTAAAAGCTGTTTTTGTT+TGG + chr3.2:69510248-69510267 MS.gene25899:CDS 25.0%
AAAACTCCCAAACAAAGATT+GGG - chr3.2:69512240-69512259 None:intergenic 30.0%
AAAGAATGGAGAACTTTAGA+GGG + chr3.2:69512297-69512316 MS.gene25899:intron 30.0%
AAAGTCATCATAATGTATGG+CGG - chr3.2:69514229-69514248 None:intergenic 30.0%
AAATCAAATGGGAATCTATC+TGG - chr3.2:69515518-69515537 None:intergenic 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.2:69511578-69511597 None:intergenic 30.0%
AACATATCACTAAGGAAACT+AGG - chr3.2:69512820-69512839 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.2:69511794-69511813 None:intergenic 30.0%
ACATATCACTAAGGAAACTA+GGG - chr3.2:69512819-69512838 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr3.2:69513589-69513608 None:intergenic 30.0%
ACTGCAGTTATATTTCCTTA+TGG + chr3.2:69515782-69515801 MS.gene25899:CDS 30.0%
ATATATGGTCTCAATAGACA+GGG + chr3.2:69512721-69512740 MS.gene25899:intron 30.0%
ATCTCATCTGGATTATTCAA+AGG + chr3.2:69513279-69513298 MS.gene25899:intron 30.0%
ATGATCAATAAAAACGCGTA+AGG - chr3.2:69512519-69512538 None:intergenic 30.0%
ATTAACAATGAGTATGGAGT+GGG - chr3.2:69513226-69513245 None:intergenic 30.0%
ATTACAGATTCATTGTTGAC+AGG + chr3.2:69511474-69511493 MS.gene25899:CDS 30.0%
ATTCAATTTGGAAGCTTAGA+GGG - chr3.2:69513779-69513798 None:intergenic 30.0%
CAGGGTTTGTATTATAGTTA+AGG - chr3.2:69515223-69515242 None:intergenic 30.0%
CAGTTATATTTCCTTATGGT+TGG + chr3.2:69515786-69515805 MS.gene25899:CDS 30.0%
GAAACATTACAAGTTTGATG+TGG + chr3.2:69510312-69510331 MS.gene25899:CDS 30.0%
GAAGCAAGAATCATAAAGAA+TGG + chr3.2:69512283-69512302 MS.gene25899:intron 30.0%
GAGTAATATGGATATGTAGA+AGG - chr3.2:69512901-69512920 None:intergenic 30.0%
GTAGAAGGAAAATCAGTTAT+GGG - chr3.2:69512886-69512905 None:intergenic 30.0%
GTGCTAAGGTTGAATAATAT+GGG - chr3.2:69513024-69513043 None:intergenic 30.0%
TAAAGAATGGAGAACTTTAG+AGG + chr3.2:69512296-69512315 MS.gene25899:intron 30.0%
TACCTTATAAGGTGAATAAG+TGG - chr3.2:69513590-69513609 None:intergenic 30.0%
TATATATGGTCTCAATAGAC+AGG + chr3.2:69512720-69512739 MS.gene25899:intron 30.0%
TATTAACAATGAGTATGGAG+TGG - chr3.2:69513227-69513246 None:intergenic 30.0%
TATTTGATTGCTCCTAAGTA+AGG - chr3.2:69515461-69515480 None:intergenic 30.0%
TGAAAGAAGTTGAATAGGAA+GGG - chr3.2:69513164-69513183 None:intergenic 30.0%
TGGCTAGAATTTACCTTATA+AGG - chr3.2:69513601-69513620 None:intergenic 30.0%
TGTAGAAGGAAAATCAGTTA+TGG - chr3.2:69512887-69512906 None:intergenic 30.0%
TTACACGTTTCACTTAAATG+AGG + chr3.2:69515589-69515608 MS.gene25899:CDS 30.0%
TTACAGATTCATTGTTGACA+GGG + chr3.2:69511475-69511494 MS.gene25899:CDS 30.0%
TTGAAAGAAGTTGAATAGGA+AGG - chr3.2:69513165-69513184 None:intergenic 30.0%
TTGCTCATAATAGTAACAGA+CGG + chr3.2:69510596-69510615 MS.gene25899:intron 30.0%
TTGGGTTTCCATAAATGTAT+TGG - chr3.2:69513102-69513121 None:intergenic 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.2:69511905-69511924 None:intergenic 30.0%
! AAGATGGACCAATTTTTGTT+TGG + chr3.2:69510994-69511013 MS.gene25899:intron 30.0%
! AAGGTAATTATGAAGGGTAT+GGG - chr3.2:69513072-69513091 None:intergenic 30.0%
! ATCACTTATTTGAGATCAAG+TGG + chr3.2:69511537-69511556 MS.gene25899:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.2:69515678-69515697 MS.gene25899:CDS 30.0%
! CCATCTAAAACATATCACTA+AGG - chr3.2:69512828-69512847 None:intergenic 30.0%
! GATTGTTGTTGAAAACCATA+TGG - chr3.2:69513262-69513281 None:intergenic 30.0%
! GTTTCCATAAATGTATTGGT+TGG - chr3.2:69513098-69513117 None:intergenic 30.0%
! TATTTCTATCATGGACACTA+TGG + chr3.2:69511704-69511723 MS.gene25899:CDS 30.0%
! TCATTGTATTTGATGGTTGA+CGG + chr3.2:69510656-69510675 MS.gene25899:intron 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.2:69515679-69515698 MS.gene25899:CDS 30.0%
! TTTTCAACAACAATCTCATC+TGG + chr3.2:69513267-69513286 MS.gene25899:intron 30.0%
! TTTTTATCACTTTGTGTGCA+TGG - chr3.2:69511038-69511057 None:intergenic 30.0%
!! AAGATTATTTTGTAATGGGG+AGG + chr3.2:69514730-69514749 MS.gene25899:intron 30.0%
!! AGATGGACCAATTTTTGTTT+GGG + chr3.2:69510995-69511014 MS.gene25899:intron 30.0%
!! CCTTAGTGATATGTTTTAGA+TGG + chr3.2:69512825-69512844 MS.gene25899:intron 30.0%
AAGGAAAATCAGTTATGGGA+GGG - chr3.2:69512882-69512901 None:intergenic 35.0%
AAGTCATCATAATGTATGGC+GGG - chr3.2:69514228-69514247 None:intergenic 35.0%
ACTTGCAATCCTAATTCTGT+AGG - chr3.2:69514393-69514412 None:intergenic 35.0%
ATAAAGCGGATATAGGTATG+AGG - chr3.2:69513336-69513355 None:intergenic 35.0%
ATACTAGTGAAGTTCATCCA+TGG + chr3.2:69515654-69515673 MS.gene25899:CDS 35.0%
ATCTCTCTTTCTTGTGTAGT+AGG + chr3.2:69514509-69514528 MS.gene25899:intron 35.0%
ATGGTTAAGTGAGTAGAGAT+TGG + chr3.2:69511172-69511191 MS.gene25899:intron 35.0%
ATTGAACCACATTTGCATCT+GGG + chr3.2:69515863-69515882 MS.gene25899:CDS 35.0%
ATTGTGAGGATCGAGTAATA+TGG - chr3.2:69512913-69512932 None:intergenic 35.0%
CAAAACTCCCAAACAAAGAT+TGG - chr3.2:69512241-69512260 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.2:69511698-69511717 None:intergenic 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr3.2:69513588-69513607 None:intergenic 35.0%
CTCAACACACAAAGCAAAAT+CGG + chr3.2:69515383-69515402 MS.gene25899:CDS 35.0%
CTGTAATGAAAAGTTTCTCC+TGG - chr3.2:69511461-69511480 None:intergenic 35.0%
GAAAATATTACAAGTGGAGG+TGG - chr3.2:69513835-69513854 None:intergenic 35.0%
GAAGGTAATTATGAAGGGTA+TGG - chr3.2:69513073-69513092 None:intergenic 35.0%
GATTCAATTTGGAAGCTTAG+AGG - chr3.2:69513780-69513799 None:intergenic 35.0%
GCAAGGAAAACATGACTAAT+AGG + chr3.2:69514587-69514606 MS.gene25899:intron 35.0%
GCACACAAAGTGATAAAAAG+AGG + chr3.2:69511039-69511058 MS.gene25899:intron 35.0%
GGTGCTAAGGTTGAATAATA+TGG - chr3.2:69513025-69513044 None:intergenic 35.0%
GTGCTCTTCATTGTATTTGA+TGG + chr3.2:69510649-69510668 MS.gene25899:intron 35.0%
GTGTTCAAGATTATGTCACA+TGG + chr3.2:69512662-69512681 MS.gene25899:intron 35.0%
GTTAATCCAAGTACAACAAC+AGG + chr3.2:69515557-69515576 MS.gene25899:CDS 35.0%
GTTGTTGTACTTGGATTAAC+TGG - chr3.2:69515557-69515576 None:intergenic 35.0%
TAAAGCGGATATAGGTATGA+GGG - chr3.2:69513335-69513354 None:intergenic 35.0%
TAAGGTAAATTCTAGCCACT+AGG + chr3.2:69513603-69513622 MS.gene25899:intron 35.0%
TAGCAAACCCAATCTTTGTT+TGG + chr3.2:69512230-69512249 MS.gene25899:intron 35.0%
TCCTCCAACCAATACATTTA+TGG + chr3.2:69513091-69513110 MS.gene25899:intron 35.0%
TCTAAGAGCAAAAGGAGAAA+AGG - chr3.2:69512795-69512814 None:intergenic 35.0%
TCTTTCAACCCATACAATCA+TGG + chr3.2:69513177-69513196 MS.gene25899:intron 35.0%
TGGAGGAAGGTAATTATGAA+GGG - chr3.2:69513078-69513097 None:intergenic 35.0%
TGGTAATATAGGGAAAGTTG+AGG - chr3.2:69515246-69515265 None:intergenic 35.0%
TGGTTAAGTGAGTAGAGATT+GGG + chr3.2:69511173-69511192 MS.gene25899:intron 35.0%
TGTTCTGCCCAAACAAAAAT+TGG - chr3.2:69511005-69511024 None:intergenic 35.0%
TTAGAAAGCGAAGCATAAAG+CGG - chr3.2:69513350-69513369 None:intergenic 35.0%
TTGCCAATAACACCTTACTT+AGG + chr3.2:69515446-69515465 MS.gene25899:CDS 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.2:69515805-69515824 MS.gene25899:CDS 35.0%
TTGGAGGAAGGTAATTATGA+AGG - chr3.2:69513079-69513098 None:intergenic 35.0%
TTGGTAGATGTGCAAATCTA+TGG + chr3.2:69514678-69514697 MS.gene25899:intron 35.0%
TTTGTAGATTGGAACTCCTT+GGG + chr3.2:69511397-69511416 MS.gene25899:intron 35.0%
! AAACTTTTCTGATGAACACC+TGG - chr3.2:69515734-69515753 None:intergenic 35.0%
! AGCAAACCCAATCTTTGTTT+GGG + chr3.2:69512231-69512250 MS.gene25899:intron 35.0%
! CAACTTCAGCTCTAATAGTT+GGG - chr3.2:69510405-69510424 None:intergenic 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.2:69511695-69511714 MS.gene25899:CDS 35.0%
! GAATAGGAAGGGTATAGTAA+AGG - chr3.2:69513153-69513172 None:intergenic 35.0%
! TGGGTTGAAAGAAGTTGAAT+AGG - chr3.2:69513169-69513188 None:intergenic 35.0%
! TTTGAAATTGCATTGAGGCA+GGG - chr3.2:69514321-69514340 None:intergenic 35.0%
! TTTTGTAGATTGGAACTCCT+TGG + chr3.2:69511396-69511415 MS.gene25899:intron 35.0%
!! AGGTGTTATTGGCAATGTTA+AGG - chr3.2:69515441-69515460 None:intergenic 35.0%
!! ATCTTTGTTTGGGAGTTTTG+AGG + chr3.2:69512241-69512260 MS.gene25899:intron 35.0%
!! ATTCAAAGGCACTCTCATAT+GGG + chr3.2:69513293-69513312 MS.gene25899:intron 35.0%
!! CAAAGATTGGGTTTGCTATA+AGG - chr3.2:69512228-69512247 None:intergenic 35.0%
!! CTGAGGGTGTTCATAAAATT+GGG + chr3.2:69515903-69515922 MS.gene25899:CDS 35.0%
!! TAAAAGTGTTTCTGGCTTTG+AGG + chr3.2:69513367-69513386 MS.gene25899:intron 35.0%
!! TAAATGTATTGGTTGGAGGA+AGG - chr3.2:69513091-69513110 None:intergenic 35.0%
!! TATTCAAAGGCACTCTCATA+TGG + chr3.2:69513292-69513311 MS.gene25899:intron 35.0%
!! TCCATAAATGTATTGGTTGG+AGG - chr3.2:69513095-69513114 None:intergenic 35.0%
!! TCGCTTTCTAAAAGTGTTTC+TGG + chr3.2:69513359-69513378 MS.gene25899:intron 35.0%
!! TCTTTGTTTGGGAGTTTTGA+GGG + chr3.2:69512242-69512261 MS.gene25899:intron 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.2:69515886-69515905 MS.gene25899:CDS 35.0%
!!! ATGGGTGTTATTTTTGCTGA+GGG + chr3.2:69515887-69515906 MS.gene25899:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.2:69515692-69515711 MS.gene25899:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.2:69515686-69515705 MS.gene25899:CDS 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.2:69515685-69515704 MS.gene25899:CDS 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.2:69514248-69514267 MS.gene25899:intron 35.0%
AAAGCGGATATAGGTATGAG+GGG - chr3.2:69513334-69513353 None:intergenic 40.0%
AAGATCCCAACCAAAACTAC+TGG + chr3.2:69515144-69515163 MS.gene25899:CDS 40.0%
AATATAGGGAAAGTTGAGGC+AGG - chr3.2:69515242-69515261 None:intergenic 40.0%
AATATGGTGTGTGTGTGGAT+TGG - chr3.2:69512964-69512983 None:intergenic 40.0%
AATGAAATGCCCAAACACCT+GGG - chr3.2:69515838-69515857 None:intergenic 40.0%
ACAACATGCTCTATGCAATC+TGG - chr3.2:69510355-69510374 None:intergenic 40.0%
AGACTGTAGCCATGATTGTA+TGG - chr3.2:69513189-69513208 None:intergenic 40.0%
AGCGAGCCATTTCATTATGA+TGG + chr3.2:69511785-69511804 MS.gene25899:CDS 40.0%
AGGAGAGGTAAAGACCATAT+GGG + chr3.2:69510913-69510932 MS.gene25899:intron 40.0%
AGTAAAGGGTTAAGGGAGAA+AGG + chr3.2:69510944-69510963 MS.gene25899:intron 40.0%
AGTTCACAAGAACAAGAGGT+TGG + chr3.2:69511845-69511864 MS.gene25899:CDS 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.2:69515773-69515792 None:intergenic 40.0%
ATATAGGGAAAGTTGAGGCA+GGG - chr3.2:69515241-69515260 None:intergenic 40.0%
ATATGGGTGAGAGAGAGTAA+AGG + chr3.2:69510929-69510948 MS.gene25899:intron 40.0%
ATATGGTGTGTGTGTGGATT+GGG - chr3.2:69512963-69512982 None:intergenic 40.0%
ATTATTATATGTAGGGGCCG+GGG + chr3.2:69513547-69513566 MS.gene25899:intron 40.0%
ATTATTCCATTCGCATCGCA+AGG + chr3.2:69514570-69514589 MS.gene25899:intron 40.0%
CACAAGTTCACAAGAACAAG+AGG + chr3.2:69511841-69511860 MS.gene25899:CDS 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.2:69510464-69510483 MS.gene25899:CDS 40.0%
CATAATGAAATGGCTCGCTT+TGG - chr3.2:69511784-69511803 None:intergenic 40.0%
CATTATTATATGTAGGGGCC+GGG + chr3.2:69513546-69513565 MS.gene25899:intron 40.0%
CATTGAACCACATTTGCATC+TGG + chr3.2:69515862-69515881 MS.gene25899:CDS 40.0%
CCAACTATTAGAGCTGAAGT+TGG + chr3.2:69510403-69510422 MS.gene25899:CDS 40.0%
CCAAGTACAACAACAGGTAA+CGG + chr3.2:69515563-69515582 MS.gene25899:CDS 40.0%
CCCCACTTATTCACCTTATA+AGG + chr3.2:69513585-69513604 MS.gene25899:intron 40.0%
CCTCAATGCAATTTCAAAGG+TGG + chr3.2:69514323-69514342 MS.gene25899:CDS 40.0%
CGTGTGGGTGTTTAATCATA+TGG + chr3.2:69511667-69511686 MS.gene25899:intron 40.0%
CTATGCTATCAACCGTGAAT+GGG - chr3.2:69515079-69515098 None:intergenic 40.0%
CTGCCTCAATGCAATTTCAA+AGG + chr3.2:69514320-69514339 MS.gene25899:CDS 40.0%
CTTAATGCAGTCCAACCATA+AGG - chr3.2:69515800-69515819 None:intergenic 40.0%
CTTATGGTTGGACTGCATTA+AGG + chr3.2:69515798-69515817 MS.gene25899:CDS 40.0%
GAAGGAAAATCAGTTATGGG+AGG - chr3.2:69512883-69512902 None:intergenic 40.0%
GAATGGAGCTATAATACTGG+TGG - chr3.2:69512940-69512959 None:intergenic 40.0%
GACACAAAAATTATGGCGCA+CGG - chr3.2:69515006-69515025 None:intergenic 40.0%
GACTGTAGCCATGATTGTAT+GGG - chr3.2:69513188-69513207 None:intergenic 40.0%
GAGAGAGAGTAAAGGGTTAA+GGG + chr3.2:69510937-69510956 MS.gene25899:intron 40.0%
GATAGCATAGACATCTACTC+AGG + chr3.2:69515089-69515108 MS.gene25899:CDS 40.0%
GCATTATTATATGTAGGGGC+CGG + chr3.2:69513545-69513564 MS.gene25899:intron 40.0%
GGAGGAGATTAAGTGGAATA+TGG - chr3.2:69512980-69512999 None:intergenic 40.0%
GGTTGAATAATATGGGTGAG+AGG - chr3.2:69513017-69513036 None:intergenic 40.0%
GTAGAGCTGAAATGGTGTTT+GGG - chr3.2:69513120-69513139 None:intergenic 40.0%
GTATAGTAAAGGTTGGGTGA+TGG - chr3.2:69513142-69513161 None:intergenic 40.0%
GTTCACGAAATTAGCTGCTA+GGG - chr3.2:69514294-69514313 None:intergenic 40.0%
TATGGGTGAGAGAGAGTAAA+GGG + chr3.2:69510930-69510949 MS.gene25899:intron 40.0%
TCAAATGGGAATCTATCTGG+TGG - chr3.2:69515515-69515534 None:intergenic 40.0%
TCTATGCTATCAACCGTGAA+TGG - chr3.2:69515080-69515099 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.2:69511440-69511459 MS.gene25899:CDS 40.0%
TGAATAATATGGGTGAGAGG+TGG - chr3.2:69513014-69513033 None:intergenic 40.0%
TGAGAGAGAGTAAAGGGTTA+AGG + chr3.2:69510936-69510955 MS.gene25899:intron 40.0%
TGCATAGAGCATGTTGTGAT+GGG + chr3.2:69510358-69510377 MS.gene25899:CDS 40.0%
TGTTCACGAAATTAGCTGCT+AGG - chr3.2:69514295-69514314 None:intergenic 40.0%
TGTTGAGGAGGTAAATTGTG+CGG - chr3.2:69515370-69515389 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.2:69515206-69515225 None:intergenic 40.0%
TTGCATAGAGCATGTTGTGA+TGG + chr3.2:69510357-69510376 MS.gene25899:CDS 40.0%
TTTAATCATATGGTGCAGCC+TGG + chr3.2:69511677-69511696 MS.gene25899:intron 40.0%
TTTACTCTCTCTCACCCATA+TGG - chr3.2:69510930-69510949 None:intergenic 40.0%
! AATGGAGAACTTTAGAGGGT+TGG + chr3.2:69512301-69512320 MS.gene25899:intron 40.0%
! AGGAAGGGTATAGTAAAGGT+TGG - chr3.2:69513149-69513168 None:intergenic 40.0%
! ATGGAGAACTTTAGAGGGTT+GGG + chr3.2:69512302-69512321 MS.gene25899:intron 40.0%
! ATTAATCTGAACTGGTGCTG+CGG + chr3.2:69513956-69513975 MS.gene25899:intron 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.2:69510367-69510386 MS.gene25899:CDS 40.0%
! CCAACTTCAGCTCTAATAGT+TGG - chr3.2:69510406-69510425 None:intergenic 40.0%
! CGATTTTGCTTTGTGTGTTG+AGG - chr3.2:69515385-69515404 None:intergenic 40.0%
! GCTCCTAAGTAAGGTGTTAT+TGG - chr3.2:69515452-69515471 None:intergenic 40.0%
! GGAAGGGTATAGTAAAGGTT+GGG - chr3.2:69513148-69513167 None:intergenic 40.0%
! TATTTGATGGTTGACGGACA+AGG + chr3.2:69510662-69510681 MS.gene25899:intron 40.0%
! TTTTGCTTTGTGTGTTGAGG+AGG - chr3.2:69515382-69515401 None:intergenic 40.0%
! TTTTTGATCAGGTAGCCTAG+TGG - chr3.2:69513621-69513640 None:intergenic 40.0%
!! ACTAGGGTTCTAAGAGCAAA+AGG - chr3.2:69512803-69512822 None:intergenic 40.0%
!! ATCATAATGTATGGCGGGTT+AGG - chr3.2:69514223-69514242 None:intergenic 40.0%
!! CAAAACTACTGGCTCTCAAT+CGG + chr3.2:69515155-69515174 MS.gene25899:CDS 40.0%
!! CCACCTTTGAAATTGCATTG+AGG - chr3.2:69514326-69514345 None:intergenic 40.0%
!! CTTTGAAATTGCATTGAGGC+AGG - chr3.2:69514322-69514341 None:intergenic 40.0%
!! GCTGAGGGTGTTCATAAAAT+TGG + chr3.2:69515902-69515921 MS.gene25899:CDS 40.0%
!! GGTGTTGTTTAGGAACATCT+TGG - chr3.2:69515966-69515985 None:intergenic 40.0%
!! TATTTTGTAATGGGGAGGCT+TGG + chr3.2:69514735-69514754 MS.gene25899:intron 40.0%
!! TGGTTGGTGGTGGTAATATA+GGG - chr3.2:69515256-69515275 None:intergenic 40.0%
!!! AGTAGTTTTGGTTGGGATCT+TGG - chr3.2:69515145-69515164 None:intergenic 40.0%
AAACTACGTGCACCCATTCA+CGG + chr3.2:69515064-69515083 MS.gene25899:CDS 45.0%
AAGAAAAACCATTGCTGGCC+TGG - chr3.2:69511573-69511592 None:intergenic 45.0%
AATGGCTCGCTTTGGTTGTT+TGG - chr3.2:69511776-69511795 None:intergenic 45.0%
AATGGGAATCTATCTGGTGG+TGG - chr3.2:69515512-69515531 None:intergenic 45.0%
ACCAACAAGCTCTCTACAGA+AGG + chr3.2:69510448-69510467 MS.gene25899:CDS 45.0%
ACCACATTTGCATCTGGGAA+TGG + chr3.2:69515868-69515887 MS.gene25899:CDS 45.0%
AGAGAGACAGGGAGTAAAGA+TGG + chr3.2:69510978-69510997 MS.gene25899:intron 45.0%
AGTGGAATATGGTGTGTGTG+TGG - chr3.2:69512969-69512988 None:intergenic 45.0%
ATACTGGTGGTTGCATTGTG+AGG - chr3.2:69512927-69512946 None:intergenic 45.0%
ATCTGCTTCCACCACAACAA+GGG - chr3.2:69515042-69515061 None:intergenic 45.0%
ATTACAAGTGGAGGTGGTTG+TGG - chr3.2:69513829-69513848 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.2:69515756-69515775 MS.gene25899:CDS 45.0%
CAATGAAATGCCCAAACACC+TGG - chr3.2:69515839-69515858 None:intergenic 45.0%
CCACATTTGCATCTGGGAAT+GGG + chr3.2:69515869-69515888 MS.gene25899:CDS 45.0%
CCGTTACCTGTTGTTGTACT+TGG - chr3.2:69515566-69515585 None:intergenic 45.0%
CCTACACATGCTCTTACTTG+TGG + chr3.2:69515932-69515951 MS.gene25899:CDS 45.0%
CGCTCGAAATCGTTCCATAA+GGG - chr3.2:69515281-69515300 None:intergenic 45.0%
CTACCAACTAGCTATGCTCA+CGG - chr3.2:69513519-69513538 None:intergenic 45.0%
CTACTCAGTCCTTCTACACA+CGG + chr3.2:69515118-69515137 MS.gene25899:CDS 45.0%
GAAATCGTTCCATAAGGGAG+TGG - chr3.2:69515276-69515295 None:intergenic 45.0%
GAGAGAGATCGAAGATGAGT+AGG + chr3.2:69510874-69510893 MS.gene25899:intron 45.0%
GAGGAGAGGTAAAGACCATA+TGG + chr3.2:69510912-69510931 MS.gene25899:intron 45.0%
GCGAAGCATAAAGCGGATAT+AGG - chr3.2:69513343-69513362 None:intergenic 45.0%
GCTTGCTCATCAATGGAAGA+GGG + chr3.2:69514255-69514274 MS.gene25899:CDS 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.2:69510469-69510488 MS.gene25899:CDS 45.0%
GGAATCAATGGTCAGTTTCC+TGG + chr3.2:69510379-69510398 MS.gene25899:CDS 45.0%
GGGGAATGGAGCTATAATAC+TGG - chr3.2:69512943-69512962 None:intergenic 45.0%
GGTAGAGCTGAAATGGTGTT+TGG - chr3.2:69513121-69513140 None:intergenic 45.0%
GGTGAAGGGAAATTTCAACC+AGG + chr3.2:69515713-69515732 MS.gene25899:CDS 45.0%
GTAGAATCACACCCTTGTTG+TGG + chr3.2:69515028-69515047 MS.gene25899:intron 45.0%
GTCCTTAGCTTCTCTCAACT+TGG + chr3.2:69514418-69514437 MS.gene25899:CDS 45.0%
GTTCACCAACCCATCTCATT+GGG - chr3.2:69511883-69511902 None:intergenic 45.0%
GTTCATCCATGGCATTTGCA+TGG + chr3.2:69515665-69515684 MS.gene25899:CDS 45.0%
TACCAACTAGCTATGCTCAC+GGG - chr3.2:69513518-69513537 None:intergenic 45.0%
TCAAGTGGCATATATCTCCC+AGG + chr3.2:69511552-69511571 MS.gene25899:intron 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.2:69515674-69515693 None:intergenic 45.0%
TCCTTCTGTAGAGAGCTTGT+TGG - chr3.2:69510452-69510471 None:intergenic 45.0%
TGCACATGGAGGAGATTAAG+TGG - chr3.2:69512987-69513006 None:intergenic 45.0%
TGGAGCTGAAATAGGTGCTA+AGG - chr3.2:69513038-69513057 None:intergenic 45.0%
TTCACCAACCCATCTCATTG+GGG - chr3.2:69511882-69511901 None:intergenic 45.0%
! AGAAAAACCATTGCTGGCCT+GGG - chr3.2:69511572-69511591 None:intergenic 45.0%
! AGCTTGCTCATCAATGGAAG+AGG + chr3.2:69514254-69514273 MS.gene25899:CDS 45.0%
! ATTGTGCGGTCTGCGATTTT+TGG - chr3.2:69515356-69515375 None:intergenic 45.0%
! CCACAAGTAAGAGCATGTGT+AGG - chr3.2:69515935-69515954 None:intergenic 45.0%
! CGATTGAGAGCCAGTAGTTT+TGG - chr3.2:69515157-69515176 None:intergenic 45.0%
! CGTAAGGCTCTTTGAGAGTT+GGG - chr3.2:69512503-69512522 None:intergenic 45.0%
! GAAGGGTATGGGTTTGATGA+TGG - chr3.2:69513061-69513080 None:intergenic 45.0%
! GTTGGTGAGGTCAATGACAA+CGG - chr3.2:69510434-69510453 None:intergenic 45.0%
! TATGGTGTGTGTGTGGATTG+GGG - chr3.2:69512962-69512981 None:intergenic 45.0%
! TCTTAAACGGCTAGTTGAGC+TGG - chr3.2:69514714-69514733 None:intergenic 45.0%
! TGTTTTCCTTGCGATGCGAA+TGG - chr3.2:69514579-69514598 None:intergenic 45.0%
!! GATGATGGTGGAGCTGAAAT+AGG - chr3.2:69513046-69513065 None:intergenic 45.0%
!! GTGGTTGGTGGTGGTAATAT+AGG - chr3.2:69515257-69515276 None:intergenic 45.0%
!! TATGGGAGGGTTTTGTGATC+AGG - chr3.2:69512869-69512888 None:intergenic 45.0%
!! TGGCTTTGAGGCTATTGCTT+AGG + chr3.2:69513379-69513398 MS.gene25899:intron 45.0%
!! TTAATCTGAACTGGTGCTGC+GGG + chr3.2:69513957-69513976 MS.gene25899:intron 45.0%
!!! GAGAGCCAGTAGTTTTGGTT+GGG - chr3.2:69515152-69515171 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.2:69515699-69515718 MS.gene25899:CDS 45.0%
!!! TCTGCGATTTTTGGTGTCTG+TGG - chr3.2:69515347-69515366 None:intergenic 45.0%
!!! TGAGAGCCAGTAGTTTTGGT+TGG - chr3.2:69515153-69515172 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.2:69515698-69515717 MS.gene25899:CDS 45.0%
!! TTATAATAATATAATAACTA+GGG + chr3.2:69511623-69511642 MS.gene25899:intron 5.0%
!! TTTATAATAATATAATAACT+AGG + chr3.2:69511622-69511641 MS.gene25899:intron 5.0%
AAGCAAGAGAGGAAGAGGAG+AGG + chr3.2:69510898-69510917 MS.gene25899:intron 50.0%
AATGAGTATGGAGTGGGTGC+AGG - chr3.2:69513220-69513239 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.2:69511871-69511890 None:intergenic 50.0%
ATCTGCTCCTCAGTGATCTG+TGG + chr3.2:69511816-69511835 MS.gene25899:CDS 50.0%
ATTGGAACTCCTTGGGCTGA+TGG + chr3.2:69511404-69511423 MS.gene25899:CDS 50.0%
CATCTGCTTCCACCACAACA+AGG - chr3.2:69515043-69515062 None:intergenic 50.0%
CATGAGAGTGGAGAGAGACA+GGG + chr3.2:69510967-69510986 MS.gene25899:intron 50.0%
CCCATTCCCAGATGCAAATG+TGG - chr3.2:69515872-69515891 None:intergenic 50.0%
CGTGAGCATAGCTAGTTGGT+AGG + chr3.2:69513517-69513536 MS.gene25899:intron 50.0%
CGTGTGTAGAAGGACTGAGT+AGG - chr3.2:69515120-69515139 None:intergenic 50.0%
CTCTTCAGCCCCAATGAGAT+GGG + chr3.2:69511871-69511890 MS.gene25899:CDS 50.0%
GAAATTGCATTGAGGCAGGG+TGG - chr3.2:69514318-69514337 None:intergenic 50.0%
GATCTTGGTCCGTGTGTAGA+AGG - chr3.2:69515130-69515149 None:intergenic 50.0%
GATGAGTAGGCAAGCAAGAG+AGG + chr3.2:69510887-69510906 MS.gene25899:intron 50.0%
GCGCTCGAAATCGTTCCATA+AGG - chr3.2:69515282-69515301 None:intergenic 50.0%
GGACAATGAGACGTGGACTT+TGG - chr3.2:69512478-69512497 None:intergenic 50.0%
GGCGCTACTTCGAGAATCTT+GGG - chr3.2:69514362-69514381 None:intergenic 50.0%
GGTTCACCAACCCATCTCAT+TGG - chr3.2:69511884-69511903 None:intergenic 50.0%
TAGGCAAGCAAGAGAGGAAG+AGG + chr3.2:69510893-69510912 MS.gene25899:intron 50.0%
TATATCTCCCAGGCCAGCAA+TGG + chr3.2:69511562-69511581 MS.gene25899:intron 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.2:69510480-69510499 MS.gene25899:CDS 50.0%
TCGTTCCATAAGGGAGTGGT+TGG - chr3.2:69515272-69515291 None:intergenic 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.2:69511870-69511889 MS.gene25899:CDS 50.0%
TGAGAGGTGGAGTATGCACA+TGG - chr3.2:69513001-69513020 None:intergenic 50.0%
TGCAAATCTATGGCGTCGCA+TGG + chr3.2:69514688-69514707 MS.gene25899:intron 50.0%
TGGCGCTACTTCGAGAATCT+TGG - chr3.2:69514363-69514382 None:intergenic 50.0%
TGTCTGTGGTGTTCCCATTC+TGG - chr3.2:69515333-69515352 None:intergenic 50.0%
TTCCATAAGGGAGTGGTTGG+TGG - chr3.2:69515269-69515288 None:intergenic 50.0%
TTGTGTGCCACAGATCACTG+AGG - chr3.2:69511826-69511845 None:intergenic 50.0%
! AAGGCTCTTTGAGAGTTGGG+AGG - chr3.2:69512500-69512519 None:intergenic 50.0%
! AAGGGAGAAAGGCATGAGAG+TGG + chr3.2:69510955-69510974 MS.gene25899:intron 50.0%
! AGGCTCTTTGAGAGTTGGGA+GGG - chr3.2:69512499-69512518 None:intergenic 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG - chr3.2:69513581-69513600 None:intergenic 50.0%
! AGGTTTAAGGCAGACAACCC+AGG + chr3.2:69515818-69515837 MS.gene25899:CDS 50.0%
! CTATGCTCACGGGACCTTTT+TGG - chr3.2:69513508-69513527 None:intergenic 50.0%
! CTTGTTGTGGTGGAAGCAGA+TGG + chr3.2:69515041-69515060 MS.gene25899:CDS 50.0%
! GAATCACACCCTTGTTGTGG+TGG + chr3.2:69515031-69515050 MS.gene25899:intron 50.0%
! GCGTAAGGCTCTTTGAGAGT+TGG - chr3.2:69512504-69512523 None:intergenic 50.0%
! GGCCAAGTTGAGAGAAGCTA+AGG - chr3.2:69514423-69514442 None:intergenic 50.0%
! GGGTGATGGTAGAGCTGAAA+TGG - chr3.2:69513128-69513147 None:intergenic 50.0%
! TCAGCTCTAATAGTTGGGCC+AGG - chr3.2:69510400-69510419 None:intergenic 50.0%
!! CTGTAGAGAGCTTGTTGGTG+AGG - chr3.2:69510447-69510466 None:intergenic 50.0%
!! GGGTATGGGTTTGATGATGG+TGG - chr3.2:69513058-69513077 None:intergenic 50.0%
!! TGTGTGTGTGGATTGGGGAA+TGG - chr3.2:69512957-69512976 None:intergenic 50.0%
AAGTGAGTTCTCACCACCGC+TGG + chr3.2:69513803-69513822 MS.gene25899:intron 55.0%
AGGCAGACAACCCAGGTGTT+TGG + chr3.2:69515825-69515844 MS.gene25899:CDS 55.0%
ATGGCATGCAGAGAGCAGCA+GGG + chr3.2:69511723-69511742 MS.gene25899:CDS 55.0%
CACCACCAACCACTCCCTTA+TGG + chr3.2:69515264-69515283 MS.gene25899:CDS 55.0%
CAGAGAGCAGCAGGGTTGTA+TGG + chr3.2:69511731-69511750 MS.gene25899:CDS 55.0%
GAGGTGGAGTATGCACATGG+AGG - chr3.2:69512998-69513017 None:intergenic 55.0%
GCATGAGAGTGGAGAGAGAC+AGG + chr3.2:69510966-69510985 MS.gene25899:intron 55.0%
GGCAGACAACCCAGGTGTTT+GGG + chr3.2:69515826-69515845 MS.gene25899:CDS 55.0%
GTCCCGTGAGCATAGCTAGT+TGG + chr3.2:69513513-69513532 MS.gene25899:intron 55.0%
TATGGCATGCAGAGAGCAGC+AGG + chr3.2:69511722-69511741 MS.gene25899:CDS 55.0%
TCAGCCCCAATGAGATGGGT+TGG + chr3.2:69511875-69511894 MS.gene25899:CDS 55.0%
TTGGGAGGGACAATGAGACG+TGG - chr3.2:69512485-69512504 None:intergenic 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG - chr3.2:69513580-69513599 None:intergenic 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG - chr3.2:69513579-69513598 None:intergenic 55.0%
!! CATAAGGGAGTGGTTGGTGG+TGG - chr3.2:69515266-69515285 None:intergenic 55.0%
!! GAGATGGGTTGGTGAACCAC+AGG + chr3.2:69511886-69511905 MS.gene25899:CDS 55.0%
GAGTATGGAGTGGGTGCAGG+TGG - chr3.2:69513217-69513236 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.2:69511416-69511435 None:intergenic 60.0%
GTGGAGGTGGTTGTGGCCAG+CGG - chr3.2:69513822-69513841 None:intergenic 65.0%
GAGGTGGTTGTGGCCAGCGG+TGG - chr3.2:69513819-69513838 None:intergenic 70.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr3.2:69513567-69513586 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr3.2:69513559-69513578 MS.gene25899:intron 75.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 69510241 69515994 69510241 ID=MS.gene25899
chr3.2 mRNA 69510241 69515994 69510241 ID=MS.gene25899.t1;Parent=MS.gene25899
chr3.2 exon 69510241 69510501 69510241 ID=MS.gene25899.t1.exon1;Parent=MS.gene25899.t1
chr3.2 CDS 69510241 69510501 69510241 ID=cds.MS.gene25899.t1;Parent=MS.gene25899.t1
chr3.2 exon 69511404 69511496 69511404 ID=MS.gene25899.t1.exon2;Parent=MS.gene25899.t1
chr3.2 CDS 69511404 69511496 69511404 ID=cds.MS.gene25899.t1;Parent=MS.gene25899.t1
chr3.2 exon 69511695 69511907 69511695 ID=MS.gene25899.t1.exon3;Parent=MS.gene25899.t1
chr3.2 CDS 69511695 69511907 69511695 ID=cds.MS.gene25899.t1;Parent=MS.gene25899.t1
chr3.2 exon 69514254 69514448 69514254 ID=MS.gene25899.t1.exon4;Parent=MS.gene25899.t1
chr3.2 CDS 69514254 69514448 69514254 ID=cds.MS.gene25899.t1;Parent=MS.gene25899.t1
chr3.2 exon 69515032 69515994 69515032 ID=MS.gene25899.t1.exon5;Parent=MS.gene25899.t1
chr3.2 CDS 69515032 69515994 69515032 ID=cds.MS.gene25899.t1;Parent=MS.gene25899.t1
Gene Sequence

>MS.gene25899

ATGAGTTTGTTAAAAGCTGTTTTTGTTTGGTATATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAAACATTACAAGTTTGATGTGGAATACATGTACAAAACGCCAGATTGCATAGAGCATGTTGTGATGGGAATCAATGGTCAGTTTCCTGGCCCAACTATTAGAGCTGAAGTTGGTGACACCGTTGTCATTGACCTCACCAACAAGCTCTCTACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTTTCTTTCTCTTATTCTAGATGTTTTAATCATCACAAGCTAAGTATAATTAACATTAGTGATGTCTTTGATTAGTAAAATGTTAAGTATTGCTCATAATAGTAACAGACGGTATTAAACTGTACATGAATTATTATTTTTTGTGCTCTTCATTGTATTTGATGGTTGACGGACAAGGCAAATAATTTTGTGATGCATCTTGTTTAATATTTCTATGTATTTGATAAAATAATATAACTTTTAATACAATACTTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAATGTAAATATTCATAAAGATGAAGGAGGAAATAAAAATGATATCTAGGGAGAGAGATCGAAGATGAGTAGGCAAGCAAGAGAGGAAGAGGAGAGGTAAAGACCATATGGGTGAGAGAGAGTAAAGGGTTAAGGGAGAAAGGCATGAGAGTGGAGAGAGACAGGGAGTAAAGATGGACCAATTTTTGTTTGGGCAGAACAAAATGTATAGCCATGCACACAAAGTGATAAAAAGAGGCACATATTCTAAAAATGTTCGATCAATTTTTATTTTTTTTTTATTAGAGAGAAGCTATTTTTATATAGAAAATAAAATTATTATTTTGATAGTTTGTAAAAAGTTTTCTTATGGTTAAGTGAGTAGAGATTGGGACAAATTTTTTTTTTTGTTTTTGTTCAATATCTTGCTGTCTGTTTTATCCAATCTATGACCAATTTCTAAAAAAGTTCAAAGTAATTTTTTTTGTCAATTCATCGAGTTTTAAAATAAAATTAATGCACCTTATACATTTTTTGTTGTTTTTTTGGTAGGATACAATTTTTGTTGTTGTTTGCTAATTAAAATAATAATGTTTTGTAGATTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCATTACAGATTCATTGTTGACAGGGTAATTAATTAGTTAATTAATTAAATATTTGATTAGTTTAATCACTTATTTGAGATCAAGTGGCATATATCTCCCAGGCCAGCAATGGTTTTTCTTTTGTTGTTTTGTTTTTGAGTATCTTTTATTTTATAATAATATAATAACTAGGGCTAACATATATATGATATTAACGTGTGGGTGTTTAATCATATGGTGCAGCCTGGTACATATTTCTATCATGGACACTATGGCATGCAGAGAGCAGCAGGGTTGTATGGTTCTCTAATAGTAGATTTACCAAACAACCAAAGCGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTCAGTGATCTGTGGCACACAAGTTCACAAGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGGTTGGTGAACCACAGGTATACTTTCAACTTTTTTAATACAAAAATATCATGTTCATTCAATTTACATTTTATTTATTTATGTTATCAAATCTTAAAAATAGCTATATTTATCAATATAATAATAGAATAAAAATTTAATTCATATACATCGTTAGTGTAAAAAAAAATTACATCGTAAATCAATCGCAACTGTTAAATCATTAAAAATGTTTGACATTTGTTTTTGTACTATATCATAATAACTACTTTTAACGTTTGTTATGATGTTCAAATCCAAATCGATCCAAATTAAAACTACAAAAAGTCAAAGATTATTGCATGTCTTTATAATTCCTTATAGCAAACCCAATCTTTGTTTGGGAGTTTTGAGGGTAGAGCTTGTAAAAAAACGAAGCAAGAATCATAAAGAATGGAGAACTTTAGAGGGTTGGGTTTTGTGTAAATTTTTAAATCCAATCTATGTTGTTATAATACTTAGAAGAAGAAAAAATTAATCGTAAGTATTAATTTATTATTTTCTACAAAAACATTCTCTTAAAATTTTGAAAAATTTCTCAATTTTTCTACTCTAATTTCATCTCTCCAAAGTCCACGTCTCATTGTCCCTCCCAACTCTCAAAGAGCCTTACGCGTTTTTATTGATCATGCATGTATTATTTGTTACCCTAAACTTTTTATAACTAATTAACGTATATAAGACCTCTCTAAACGTTTTGTAATTTCTATGCTTCTGTTACTTTTCCCTATAAAATAATGTTTTTGGTACTTGGTGTTCAAGATTATGTCACATGGATAGCTATGAACTAGTTAGAATACTATATATTGAGTATATATGGTCTCAATAGACAGGGAATAAAAATGAATGAAAAAGTTATTTTAATTTTTTTAATTAGTTTTGTCCTTTTCTCCTTTTGCTCTTAGAACCCTAGTTTCCTTAGTGATATGTTTTAGATGGTATCAATTGGTGCTTCATCCTGATCACAAAACCCTCCCATAACTGATTTTCCTTCTACATATCCATATTACTCGATCCTCACAATGCAACCACCAGTATTATAGCTCCATTCCCCAATCCACACACACACCATATTCCACTTAATCTCCTCCATGTGCATACTCCACCTCTCACCCATATTATTCAACCTTAGCACCTATTTCAGCTCCACCATCATCAAACCCATACCCTTCATAATTACCTTCCTCCAACCAATACATTTATGGAAACCCAAACACCATTTCAGCTCTACCATCACCCAACCTTTACTATACCCTTCCTATTCAACTTCTTTCAACCCATACAATCATGGCTACAGTCTATATACCACCTGCACCCACTCCATACTCATTGTTAATAAGTTATTTTGGTCCATATGGTTTTCAACAACAATCTCATCTGGATTATTCAAAGGCACTCTCATATGGGAAATTTTTCAGTGTTCCCCTCATACCTATATCCGCTTTATGCTTCGCTTTCTAAAAGTGTTTCTGGCTTTGAGGCTATTGCTTAGGTTGATGCCAATAATGCTTTGCTTTAAATCCAATTTAGATTGTTATAATACTCATAAGATTAAATATATTAATCATAACTCATAAGTATGCAATTAACATTGTACCAAAAAGGTCCCGTGAGCATAGCTAGTTGGTAGGACAATGCATTATTATATGTAGGGGCCGGGGTTCGAACCCCGGACACCCCACTTATTCACCTTATAAGGTAAATTCTAGCCACTAGGCTACCTGATCAAAAAAATAACACATTGTACCAAAAAAAAAGTATGCGATTAACATTATCTGAAAATCTGAAAAAAAATACTCTCTTAAATTTTTAAAAGATTTCTTTATTTTTTCTCTACTCTTATCCTCTAAAAATCACTATCTCATTTCCCTCTAAGCTTCCAAATTGAATCTTAAAGTGAGTTCTCACCACCGCTGGCCACAACCACCTCCACTTGTAATATTTTCTTTTTCAACAGCACATATTTGAAGAAAGAAATTTGAATTTGATTTTTATATTATTACAATAATGTATTTTTTTTATTAATAATATTTTATATTTTTATATTATTAATCTGAACTGGTGCTGCGGGATCTATATCCTTAGTTTATCCTTTAACTTTTAATAAAGGAAAACATATTTTTTAAAATAAATAAAACAAGTGAAAGCATCTTATTACAGTAAGTATTTTAAATTTCTACAAAAAAACAAAACAGTAAGTATTTTAAATAAAAGTAATACCATAAGATTAATTTAATCATGGATATGGTACCTAAACAACATTGTCTTTTTTCTTATTTATAATTGCATGCCTTATGAATGACATTTTTTTCCTAACCCGCCATACATTATGATGACTTTTTTAGAGCTTGCTCATCAATGGAAGAGGGCAGTTCAATTGTTCCCTAGCAGCTAATTTCGTGAACACCACCCTGCCTCAATGCAATTTCAAAGGTGGTGAAGAATGCGCACCCAAGATTCTCGAAGTAGCGCCAAAAAAAACCTACAGAATTAGGATTGCAAGTACAACGTCCTTAGCTTCTCTCAACTTGGCCATTTCAGTAAGTTTTTGATCTATTTCTAGTTATGACCTACTAGATATATATTTGCATTATTTTACTATCTCTCTTTCTTGTGTAGTAGGTATGAAAGGTATACATTGTCTTACGTTACATAATTTATATTATTCCATTCGCATCGCAAGGAAAACATGACTAATAGGTCAAAGAAGTTAGAAAAATATATTTGAAAAAAATCGACAACAATCCTCGATTGTGTATAAAAAAATGGTTGGTAGATGTGCAAATCTATGGCGTCGCATGGCCAGCTCAACTAGCCGTTTAAGATTATTTTGTAATGGGGAGGCTTGGTTGTATGCACAACTCTTGCATGAATAGAACCTCAAATATATACTTTATTTGGATAGACATAAATGATTAAAAAATTACAAGAGATATGATATTAAATTATGTGTCTTTTTTTATTTGTATTAAATCAATGTGAGTTTCACATTTTAGAAATAGATTTGACATAAAGTTATGTGACCTAAACTGATTTTATCGATGAACGTAGAGTTTTTTATTATGTTCATTATTATCATTCATTCATCAATTAACCGTGCGCCATAATTTTTGTGTCATGTAGAATCACACCCTTGTTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCACGGTTGATAGCATAGACATCTACTCAGGCGAAACCTACTCAGTCCTTCTACACACGGACCAAGATCCCAACCAAAACTACTGGCTCTCAATCGGCATTATAAGCAGAAAATCAGACACACCACAAGCCCTAACAATCCTTAACTATAATACAAACCCTGCCTCAACTTTCCCTATATTACCACCACCAACCACTCCCTTATGGAACGATTTCGAGCGCAGCAAAGCATTCACAAAACAAATCATTTCCAGAATGGGAACACCACAGACACCAAAAATCGCAGACCGCACAATTTACCTCCTCAACACACAAAGCAAAATCGGTAATTTCACTAAATGGGCTATTAATAATGTTTCCTTAACATTGCCAATAACACCTTACTTAGGAGCAATCAAATATAAACTAAACAATACATTTGATAGAAATCCACCACCAGATAGATTCCCATTTGATTTCGACATATTTAAAACTCCAGTTAATCCAAGTACAACAACAGGTAACGGTGTTTACACGTTTCACTTAAATGAGGTTGTTGATGTGATACTACAAAATGCAAACATGTTAAAAGATAATACTAGTGAAGTTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAAATTTCAACCAGGTGTTCATCAGAAAAGTTTGAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCTTATGGTTGGACTGCATTAAGGTTTAAGGCAGACAACCCAGGTGTTTGGGCATTTCATTGTCACATTGAACCACATTTGCATCTGGGAATGGGTGTTATTTTTGCTGAGGGTGTTCATAAAATTGGGAACATACCTACACATGCTCTTACTTGTGGTGCTACAGCCAAGATGTTCCTAAACAACACCCACAACTGA
Protein sequence

>MS.gene25899.t1

MSLLKAVFVWYIWLGLFELSLAKVKHYKFDVEYMYKTPDCIEHVVMGINGQFPGPTIRAEVGDTVVIDLTNKLSTEGTVIHWHGIRQIGTPWADGTAAISQCAINPGETFHYRFIVDRPGTYFYHGHYGMQRAAGLYGSLIVDLPNNQSEPFHYDGEFNLLLSDLWHTSSQEQEVGLSSAPMRWVGEPQSLLINGRGQFNCSLAANFVNTTLPQCNFKGGEECAPKILEVAPKKTYRIRIASTTSLASLNLAISNHTLVVVEADGNYVHPFTVDSIDIYSGETYSVLLHTDQDPNQNYWLSIGIISRKSDTPQALTILNYNTNPASTFPILPPPTTPLWNDFERSKAFTKQIISRMGTPQTPKIADRTIYLLNTQSKIGNFTKWAINNVSLTLPITPYLGAIKYKLNNTFDRNPPPDRFPFDFDIFKTPVNPSTTTGNGVYTFHLNEVVDVILQNANMLKDNTSEVHPWHLHGHDFWVLGYGEGKFQPGVHQKSLNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHLGMGVIFAEGVHKIGNIPTHALTCGATAKMFLNNTHN