AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074403

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074403.t1 MTR_3g078700 91.166 566 22 2 1 565 1 539 0.0 1060
MS.gene074403.t1 MTR_3g078740 82.852 589 76 3 1 565 1 588 0.0 1023
MS.gene074403.t1 MTR_3g078730 81.770 565 76 1 1 565 1 538 0.0 943
MS.gene074403.t1 MTR_8g091390 49.818 550 269 5 17 564 26 570 0.0 561
MS.gene074403.t1 MTR_5g069680 33.511 564 321 20 4 545 6 537 7.61e-72 240
MS.gene074403.t1 MTR_7g058690 32.230 574 320 16 7 542 14 556 1.17e-71 240
MS.gene074403.t1 MTR_5g083360 30.465 581 331 18 1 544 1 545 5.56e-71 238
MS.gene074403.t1 MTR_5g081810 32.642 530 296 17 40 544 14 507 1.43e-70 236
MS.gene074403.t1 MTR_5g020620 31.634 569 327 19 1 544 8 539 3.15e-70 236
MS.gene074403.t1 MTR_7g060460 33.043 575 322 20 2 540 8 555 1.41e-69 234
MS.gene074403.t1 MTR_7g458880 31.937 573 325 17 4 540 11 554 9.66e-69 233
MS.gene074403.t1 MTR_5g020600 30.976 594 338 22 1 561 12 566 8.66e-68 229
MS.gene074403.t1 MTR_3g462760 33.272 541 316 16 22 545 23 535 1.41e-67 229
MS.gene074403.t1 MTR_7g062250 30.449 601 334 20 7 561 16 578 1.48e-67 229
MS.gene074403.t1 MTR_5g073210 31.373 561 328 18 9 541 4 535 9.30e-67 227
MS.gene074403.t1 MTR_2g008330 32.099 567 317 21 12 544 25 557 1.64e-65 224
MS.gene074403.t1 MTR_4g064530 33.031 551 299 22 25 540 44 559 2.12e-65 224
MS.gene074403.t1 MTR_3g101635 30.245 572 341 16 1 544 3 544 1.77e-62 215
MS.gene074403.t1 MTR_7g062310 30.660 561 338 14 21 553 43 580 2.43e-62 216
MS.gene074403.t1 MTR_8g027375 30.216 556 312 20 25 544 34 549 5.97e-60 209
MS.gene074403.t1 MTR_7g065980 29.066 578 339 21 7 544 3 549 1.98e-59 207
MS.gene074403.t1 MTR_4g064530 31.882 574 310 24 3 530 11 549 1.72e-58 204
MS.gene074403.t1 MTR_3g101640 30.189 583 334 23 1 544 1 549 2.13e-57 202
MS.gene074403.t1 MTR_3g071890 30.561 553 314 22 2 522 12 526 5.38e-57 201
MS.gene074403.t1 MTR_8g479390 28.007 557 335 16 25 565 31 537 1.15e-55 196
MS.gene074403.t1 MTR_4g049390 28.366 557 328 17 25 562 27 531 2.81e-55 195
MS.gene074403.t1 MTR_7g065970 28.098 573 324 23 18 544 18 548 3.98e-55 196
MS.gene074403.t1 MTR_4g132320 28.242 563 327 18 25 565 31 538 3.67e-54 192
MS.gene074403.t1 MTR_4g019225 28.546 557 331 16 24 544 25 550 6.73e-54 192
MS.gene074403.t1 MTR_3g115050 27.692 585 342 22 6 565 9 537 1.44e-53 191
MS.gene074403.t1 MTR_4g083190 26.976 582 361 20 1 562 1 538 3.47e-53 190
MS.gene074403.t1 MTR_4g048350 27.748 555 333 15 25 562 27 530 1.90e-52 187
MS.gene074403.t1 MTR_8g479380 27.341 534 316 18 48 562 52 532 6.65e-52 186
MS.gene074403.t1 MTR_5g018270 28.674 558 321 20 25 562 31 531 8.88e-52 186
MS.gene074403.t1 MTR_3g083440 27.778 576 349 21 7 562 8 536 6.33e-51 184
MS.gene074403.t1 MTR_3g083450 28.366 557 333 20 26 562 27 537 6.84e-51 184
MS.gene074403.t1 MTR_3g083390 28.007 582 340 23 7 562 8 536 8.57e-51 183
MS.gene074403.t1 MTR_3g008580 26.958 549 341 16 37 562 41 552 2.78e-50 182
MS.gene074403.t1 MTR_3g083400 27.778 576 349 21 7 562 8 536 4.86e-50 181
MS.gene074403.t1 MTR_1g026410 26.863 577 345 20 11 562 9 533 5.26e-50 181
MS.gene074403.t1 MTR_4g101650 27.837 564 337 18 27 562 29 550 6.67e-50 182
MS.gene074403.t1 MTR_3g083430 28.007 582 340 23 7 562 8 536 1.32e-49 180
MS.gene074403.t1 MTR_2g088080 27.305 564 325 19 25 562 30 534 1.40e-49 180
MS.gene074403.t1 MTR_1g090707 27.451 510 313 15 44 539 43 509 2.82e-49 180
MS.gene074403.t1 MTR_3g083410 28.224 535 318 21 48 562 12 500 7.44e-49 177
MS.gene074403.t1 MTR_4g075690 26.212 557 339 17 25 562 30 533 2.29e-48 176
MS.gene074403.t1 MTR_7g051440 26.560 561 347 19 26 562 30 549 2.62e-46 172
MS.gene074403.t1 MTR_4g083210 27.224 562 329 21 26 562 26 532 3.58e-45 167
MS.gene074403.t1 MTR_3g079660 75.556 90 22 0 476 565 5 94 3.33e-43 149
MS.gene074403.t1 MTR_2g088080 25.882 510 294 18 79 562 2 453 8.62e-38 145
MS.gene074403.t1 MTR_4g015120 33.559 295 165 9 7 296 9 277 5.40e-37 145
MS.gene074403.t1 MTR_4g015120 40.120 167 95 3 379 544 373 535 7.46e-29 121
MS.gene074403.t1 MTR_4g075690 25.957 470 282 15 25 480 30 447 5.80e-37 143
MS.gene074403.t1 MTR_2g009230 90.164 61 6 0 130 190 1 61 3.86e-33 121
MS.gene074403.t1 MTR_5g081790 30.640 297 170 10 251 524 137 420 3.99e-23 102
MS.gene074403.t1 MTR_5g081790 34.899 149 86 5 6 147 7 151 1.91e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074403.t1 AT5G21105 66.786 560 182 2 9 564 19 578 0.0 800
MS.gene074403.t1 AT5G21100 63.587 552 193 5 17 564 16 563 0.0 738
MS.gene074403.t1 AT5G21105 65.720 528 177 2 1 524 11 538 0.0 737
MS.gene074403.t1 AT4G39830 48.866 573 270 9 7 564 16 580 0.0 572
MS.gene074403.t1 AT5G21105 67.109 377 123 1 189 564 11 387 0.0 549
MS.gene074403.t1 AT4G39830 49.084 491 229 8 87 564 3 485 2.14e-168 487
MS.gene074403.t1 AT4G39830 49.080 489 228 8 89 564 3 483 1.01e-167 485
MS.gene074403.t1 AT4G39830 47.047 491 226 9 87 564 3 472 4.78e-155 452
MS.gene074403.t1 AT5G05390 29.604 581 334 17 1 544 1 543 1.14e-70 237
MS.gene074403.t1 AT5G58910 32.310 554 305 20 24 544 29 545 7.10e-67 227
MS.gene074403.t1 AT5G03260 30.973 565 330 19 7 545 6 536 1.50e-66 226
MS.gene074403.t1 AT5G58910 32.491 554 303 21 24 544 29 544 7.24e-66 224
MS.gene074403.t1 AT5G07130 32.062 577 329 19 1 544 1 547 1.68e-65 224
MS.gene074403.t1 AT5G48100 31.459 569 314 22 14 544 11 541 2.55e-64 220
MS.gene074403.t1 AT2G30210 30.309 551 333 13 21 544 22 548 4.51e-64 220
MS.gene074403.t1 AT2G29130 32.689 569 327 20 1 540 6 547 5.42e-64 219
MS.gene074403.t1 AT2G40370 28.231 588 348 16 1 544 1 558 2.60e-63 218
MS.gene074403.t1 AT5G09360 30.729 576 327 19 1 544 12 547 5.00e-63 217
MS.gene074403.t1 AT2G46570 29.982 557 318 20 22 544 29 547 3.70e-62 214
MS.gene074403.t1 AT1G18140 30.159 567 323 17 20 544 24 559 1.61e-61 213
MS.gene074403.t1 AT5G01040 29.152 566 336 17 10 544 13 544 1.64e-61 213
MS.gene074403.t1 AT5G01050 29.174 569 334 18 10 544 13 546 2.65e-61 213
MS.gene074403.t1 AT2G38080 31.525 590 332 22 8 561 5 558 2.80e-61 212
MS.gene074403.t1 AT3G09220 29.381 565 335 18 12 544 13 545 3.05e-59 207
MS.gene074403.t1 AT1G55570 30.249 562 317 22 26 562 30 541 4.77e-58 203
MS.gene074403.t1 AT5G60020 30.329 577 337 19 1 540 3 551 5.22e-58 204
MS.gene074403.t1 AT5G01190 30.511 567 333 19 24 561 24 558 9.95e-58 202
MS.gene074403.t1 AT5G58910 31.227 538 293 21 40 544 8 501 4.91e-57 200
MS.gene074403.t1 AT5G01190 30.769 546 317 19 45 561 31 544 1.19e-55 196
MS.gene074403.t1 AT5G60020 30.483 538 311 17 40 540 8 519 1.11e-54 194
MS.gene074403.t1 AT4G22010 28.674 558 326 19 25 562 26 531 1.56e-53 191
MS.gene074403.t1 AT1G21860 27.972 572 337 17 16 565 16 534 1.86e-53 190
MS.gene074403.t1 AT3G13390 29.485 563 320 23 26 562 29 540 3.71e-53 190
MS.gene074403.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene074403.t1 AT4G25240 29.472 587 346 22 4 563 7 552 8.34e-53 189
MS.gene074403.t1 AT1G21850 27.682 578 350 18 4 562 3 531 1.21e-52 188
MS.gene074403.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene074403.t1 AT4G12420 27.080 565 346 19 27 565 27 551 1.74e-52 189
MS.gene074403.t1 AT5G51480 28.164 561 341 21 27 563 30 552 2.31e-52 188
MS.gene074403.t1 AT1G75790 27.243 602 335 21 4 562 1 542 3.48e-51 184
MS.gene074403.t1 AT5G60020 29.196 572 318 21 1 524 3 535 9.59e-51 183
MS.gene074403.t1 AT5G48450 25.907 579 361 17 9 562 8 543 2.78e-50 182
MS.gene074403.t1 AT5G48450 25.907 579 361 17 9 562 8 543 5.15e-50 182
MS.gene074403.t1 AT1G76160 26.235 587 351 19 5 565 4 534 7.20e-50 181
MS.gene074403.t1 AT5G66920 26.908 524 325 12 25 539 37 511 1.25e-49 180
MS.gene074403.t1 AT2G23630 26.944 553 336 16 27 562 37 538 3.40e-48 176
MS.gene074403.t1 AT2G46570 29.234 496 280 19 83 544 4 462 4.95e-48 174
MS.gene074403.t1 AT2G23630 26.944 553 336 16 27 562 32 533 5.33e-48 176
MS.gene074403.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene074403.t1 AT5G07130 31.134 485 277 16 91 544 4 462 1.73e-47 173
MS.gene074403.t1 AT4G28090 26.792 586 344 21 9 565 9 538 6.76e-47 172
MS.gene074403.t1 AT4G37160 25.859 553 343 16 27 562 33 535 6.79e-47 172
MS.gene074403.t1 AT1G41830 24.352 579 360 18 6 562 10 532 2.09e-46 171
MS.gene074403.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene074403.t1 AT3G13400 26.523 558 342 22 26 562 28 538 6.20e-42 159
MS.gene074403.t1 AT1G55560 26.354 554 346 19 27 562 28 537 4.34e-41 156
MS.gene074403.t1 AT3G09220 28.452 478 279 17 99 544 2 448 1.17e-40 154
MS.gene074403.t1 AT4G38420 24.735 566 349 18 25 565 30 543 5.73e-40 153
MS.gene074403.t1 AT4G37160 25.966 466 284 14 27 480 33 449 7.91e-36 140
MS.gene074403.t1 AT4G38420 24.405 504 309 16 25 508 30 481 7.75e-31 126
MS.gene074403.t1 AT4G38420 24.580 476 288 15 25 480 30 454 1.82e-29 121

Find 144 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3.4:+75261008 MS.gene074403:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3.4:+75256601 MS.gene074403:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3.4:+75261238 MS.gene074403:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3.4:-75261172 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3.4:+75260925 MS.gene074403:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3.4:+75261414 MS.gene074403:CDS
CATATGGTTGGACTGCATTA+AGG 0.257525 3.4:+75261407 MS.gene074403:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3.4:+75258650 MS.gene074403:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3.4:-75260939 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3.4:-75261163 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3.4:+75255901 MS.gene074403:CDS
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3.4:-75258682 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3.4:+75261434 MS.gene074403:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3.4:-75261249 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3.4:+75261435 MS.gene074403:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3.4:+75260773 MS.gene074403:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3.4:-75258724 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3.4:-75256670 None:intergenic
CATTGAACCACATTTGCATA+TGG 0.333948 3.4:+75261471 MS.gene074403:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3.4:+75261512 MS.gene074403:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3.4:+75256018 MS.gene074403:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3.4:-75260739 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3.4:+75260873 MS.gene074403:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3.4:-75256777 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3.4:-75256029 None:intergenic
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3.4:+75255902 MS.gene074403:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3.4:-75261185 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3.4:-75256042 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3.4:-75256041 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3.4:-75261541 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3.4:-75256303 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3.4:+75256242 MS.gene074403:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3.4:-75255991 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3.4:-75260803 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3.4:-75260888 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3.4:+75260992 MS.gene074403:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3.4:-75260863 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3.4:+75260926 MS.gene074403:CDS
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3.4:+75256249 MS.gene074403:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3.4:+75261391 MS.gene074403:CDS
TCCTTCTGTATGGAGCTTGT+TGG 0.424095 3.4:-75256088 None:intergenic
AATACAGATTCAAAGTTGAC+AGG 0.425137 3.4:+75256319 MS.gene074403:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3.4:+75261365 MS.gene074403:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3.4:-75256688 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3.4:-75261406 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3.4:-75256778 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3.4:-75261067 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3.4:+75261009 MS.gene074403:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3.4:-75260903 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3.4:+75256241 MS.gene074403:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3.4:-75260812 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3.4:+75261239 MS.gene074403:CDS
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3.4:+75256628 MS.gene074403:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3.4:+75261395 MS.gene074403:CDS
AGAGAGCCATTTCATTATGA+TGG 0.456007 3.4:+75256682 MS.gene074403:CDS
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3.4:-75258804 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3.4:+75261055 MS.gene074403:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3.4:-75258678 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3.4:-75258723 None:intergenic
GAATAACAGTTCCTTCTGTA+TGG 0.465247 3.4:-75256098 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3.4:-75261136 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3.4:+75261472 MS.gene074403:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3.4:-75260819 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3.4:+75256619 MS.gene074403:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3.4:+75256592 MS.gene074403:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3.4:-75261124 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3.4:+75258651 MS.gene074403:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3.4:-75261445 None:intergenic
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3.4:-75256036 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3.4:-75260953 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3.4:+75258781 MS.gene074403:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3.4:-75260887 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3.4:+75258766 MS.gene074403:CDS
TCAGAATCACAAACTTATTG+TGG 0.512257 3.4:+75260637 MS.gene074403:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3.4:-75260872 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3.4:-75260962 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3.4:+75256772 MS.gene074403:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3.4:+75256642 MS.gene074403:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3.4:+75261477 MS.gene074403:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3.4:-75261118 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3.4:+75260650 MS.gene074403:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3.4:+75256713 MS.gene074403:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3.4:+75261172 MS.gene074403:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3.4:+75256767 MS.gene074403:CDS
CAGAAGGAACTGTTATTCAC+TGG 0.535040 3.4:+75256103 MS.gene074403:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3.4:+75261166 MS.gene074403:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3.4:-75258655 None:intergenic
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3.4:+75256285 MS.gene074403:CDS
CTGTATGGAGCTTGTTGGTG+AGG 0.546569 3.4:-75256083 None:intergenic
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3.4:-75260878 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3.4:+75261244 MS.gene074403:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3.4:-75258654 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3.4:+75261478 MS.gene074403:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3.4:-75258753 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3.4:-75261478 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3.4:+75260785 MS.gene074403:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3.4:+75261274 MS.gene074403:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3.4:+75256006 MS.gene074403:CDS
GGAACTGTTATTCACTGGCA+TGG 0.556886 3.4:+75256108 MS.gene074403:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3.4:+75258683 MS.gene074403:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3.4:-75260726 None:intergenic
CCATGATAGAAATATGTACC+AGG 0.570980 3.4:-75256592 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3.4:-75260685 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3.4:+75255996 MS.gene074403:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3.4:-75261058 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3.4:+75260640 MS.gene074403:intron
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3.4:-75258783 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3.4:-75256765 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3.4:+75261120 MS.gene074403:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3.4:+75256654 MS.gene074403:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3.4:+75256783 MS.gene074403:CDS
TCGATGTCATCAACTGCGAA+TGG 0.586686 3.4:-75260686 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3.4:-75261379 None:intergenic
TCACTGGCATGGAATCAGAC+AGG 0.589797 3.4:+75256119 MS.gene074403:CDS
CACAAGCTCACATGAACAAG+AGG 0.595059 3.4:+75256738 MS.gene074403:CDS
TTACACGTTTCAGTTGAATG+AGG 0.598282 3.4:+75261198 MS.gene074403:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3.4:-75260969 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3.4:+75255997 MS.gene074403:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3.4:+75258718 MS.gene074403:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3.4:-75258722 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3.4:+75261427 MS.gene074403:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3.4:+75258686 MS.gene074403:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3.4:-75261280 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3.4:+75260698 MS.gene074403:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3.4:+75256320 MS.gene074403:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3.4:-75256720 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3.4:+75256742 MS.gene074403:CDS
ACCAACAAGCTCCATACAGA+AGG 0.620491 3.4:+75256087 MS.gene074403:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3.4:+75258617 MS.gene074403:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3.4:-75260875 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3.4:-75261121 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3.4:+75261541 MS.gene074403:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3.4:+75261263 MS.gene074403:CDS
TTCACCAATCCATCTCATTG+GGG 0.642456 3.4:-75256776 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3.4:-75256258 None:intergenic
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3.4:+75256620 MS.gene074403:CDS
AATGTGGTTCAATGTGACAA+TGG 0.664380 3.4:-75261462 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3.4:-75261062 None:intergenic
TGTTGGTGAGGTCAATGACA+AGG 0.689203 3.4:-75256071 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3.4:-75260959 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3.4:-75261444 None:intergenic
GTTGGTGAGGTCAATGACAA+GGG 0.718919 3.4:-75256070 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3.4:+75261322 MS.gene074403:CDS
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3.4:-75260976 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATAAAAATTGAAAATT+GGG + chr3.4:75257493-75257512 MS.gene074403:intron 10.0%
!! CATATATATATAATATTAAC+TGG + chr3.4:75256548-75256567 MS.gene074403:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - chr3.4:75259429-75259448 None:intergenic 10.0%
!! TAGAAATAAAAATTGAAAAT+TGG + chr3.4:75257492-75257511 MS.gene074403:intron 10.0%
!!! AAATATCATAGTTTTTTTTT+TGG + chr3.4:75259442-75259461 MS.gene074403:intron 10.0%
!!! AATTTTTCTACTTTTTTTTT+TGG + chr3.4:75258192-75258211 MS.gene074403:intron 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - chr3.4:75260409-75260428 None:intergenic 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - chr3.4:75259805-75259824 None:intergenic 10.0%
!! ACTATATTATCATTCATAAA+AGG - chr3.4:75258576-75258595 None:intergenic 15.0%
!! ATATTTAATTATAACTAGAC+TGG - chr3.4:75256186-75256205 None:intergenic 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + chr3.4:75258165-75258184 MS.gene074403:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - chr3.4:75257729-75257748 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + chr3.4:75256523-75256542 MS.gene074403:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + chr3.4:75256552-75256571 MS.gene074403:intron 15.0%
!! TGTTTAATATATAAAGATAG+TGG - chr3.4:75257730-75257749 None:intergenic 15.0%
!! TTAAATGTTATAATGATGAA+CGG + chr3.4:75259852-75259871 MS.gene074403:intron 15.0%
!! TTCATCATTATAACATTTAA+AGG - chr3.4:75259852-75259871 None:intergenic 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - chr3.4:75258316-75258335 None:intergenic 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + chr3.4:75259399-75259418 MS.gene074403:intron 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + chr3.4:75258434-75258453 MS.gene074403:intron 15.0%
!!! TATTTTGCATATCATTATTA+GGG + chr3.4:75258943-75258962 MS.gene074403:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + chr3.4:75259254-75259273 MS.gene074403:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + chr3.4:75257642-75257661 MS.gene074403:intron 15.0%
!!! TTTATTACTTTTTTAAACGT+GGG + chr3.4:75257843-75257862 MS.gene074403:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + chr3.4:75257258-75257277 MS.gene074403:intron 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr3.4:75257842-75257861 MS.gene074403:intron 15.0%
!! AAAAAAAAAATTGACAAGTG+GGG - chr3.4:75258102-75258121 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + chr3.4:75260925-75260944 MS.gene074403:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + chr3.4:75260926-75260945 MS.gene074403:CDS 20.0%
!! AACATATATCATATATGTAG+TGG - chr3.4:75258838-75258857 None:intergenic 20.0%
!! AACTTCACGTTAAATTATTT+AGG + chr3.4:75260241-75260260 MS.gene074403:intron 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + chr3.4:75258265-75258284 MS.gene074403:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - chr3.4:75258837-75258856 None:intergenic 20.0%
!! ACATCATATTCATATGAAAA+AGG - chr3.4:75257411-75257430 None:intergenic 20.0%
!! ATACATTCAAATAAATGAAG+CGG + chr3.4:75259777-75259796 MS.gene074403:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + chr3.4:75259326-75259345 MS.gene074403:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + chr3.4:75260198-75260217 MS.gene074403:intron 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - chr3.4:75258103-75258122 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + chr3.4:75259158-75259177 MS.gene074403:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + chr3.4:75260263-75260282 MS.gene074403:intron 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - chr3.4:75258104-75258123 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - chr3.4:75260584-75260603 None:intergenic 20.0%
!! TGTTCAATTAGTTGTTATAT+TGG + chr3.4:75259623-75259642 MS.gene074403:intron 20.0%
!! TTAAATATGTCATAATCCAT+TGG - chr3.4:75261139-75261158 None:intergenic 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + chr3.4:75260202-75260221 MS.gene074403:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG - chr3.4:75259075-75259094 None:intergenic 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG - chr3.4:75257705-75257724 None:intergenic 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - chr3.4:75260466-75260485 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + chr3.4:75258942-75258961 MS.gene074403:intron 20.0%
!!! TATCATAGTTTTTTTTTTGG+TGG + chr3.4:75259445-75259464 MS.gene074403:intron 20.0%
! AAAAAAAAATTGACAAGTGG+GGG - chr3.4:75258101-75258120 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG + chr3.4:75261239-75261258 MS.gene074403:CDS 25.0%
! AAGACAATAGAAATATGAAC+TGG + chr3.4:75258138-75258157 MS.gene074403:intron 25.0%
! AATCAATTGTCGACATAATA+AGG + chr3.4:75259086-75259105 MS.gene074403:intron 25.0%
! AATTAGTTGTTATATTGGAG+GGG + chr3.4:75259628-75259647 MS.gene074403:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - chr3.4:75258992-75259011 None:intergenic 25.0%
! AATTTGATTGATCCTAAGTA+AGG - chr3.4:75261070-75261089 None:intergenic 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - chr3.4:75256983-75257002 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + chr3.4:75260267-75260286 MS.gene074403:intron 25.0%
! ATAAAGCCAAATGTTAGTAT+AGG + chr3.4:75259597-75259616 MS.gene074403:intron 25.0%
! ATTATTAGGTATTAGGTGAA+TGG - chr3.4:75257540-75257559 None:intergenic 25.0%
! CAATTAGTTGTTATATTGGA+GGG + chr3.4:75259627-75259646 MS.gene074403:intron 25.0%
! CTCAATACACAAAACAAAAT+CGG + chr3.4:75260992-75261011 MS.gene074403:CDS 25.0%
! CTGAAACAAACAGAAATTAT+GGG - chr3.4:75260621-75260640 None:intergenic 25.0%
! CTTAGGAATTATTAGGTATT+AGG - chr3.4:75257547-75257566 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr3.4:75259489-75259508 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + chr3.4:75259136-75259155 MS.gene074403:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + chr3.4:75259207-75259226 MS.gene074403:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3.4:75257790-75257809 None:intergenic 25.0%
! TACTATTCCATTATCTTTCT+TGG - chr3.4:75258418-75258437 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr3.4:75257804-75257823 MS.gene074403:intron 25.0%
! TCAATTAGTTGTTATATTGG+AGG + chr3.4:75259626-75259645 MS.gene074403:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - chr3.4:75260620-75260639 None:intergenic 25.0%
! TGAAATAATTTAGGAACAGT+AGG + chr3.4:75259167-75259186 MS.gene074403:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - chr3.4:75259136-75259155 None:intergenic 25.0%
! TGCATAATATATACAAGGTT+CGG - chr3.4:75259484-75259503 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr3.4:75257803-75257822 MS.gene074403:intron 25.0%
! TTATTAGGTATTAGGTGAAT+GGG - chr3.4:75257539-75257558 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - chr3.4:75260822-75260841 None:intergenic 25.0%
!! CTTTCAAGAATTTTATTGTC+TGG - chr3.4:75257448-75257467 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - chr3.4:75256044-75256063 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + chr3.4:75258056-75258075 MS.gene074403:intron 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - chr3.4:75260622-75260641 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + chr3.4:75258449-75258468 MS.gene074403:intron 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - chr3.4:75256045-75256064 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - chr3.4:75260823-75260842 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - chr3.4:75260760-75260779 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + chr3.4:75257100-75257119 MS.gene074403:intron 25.0%
!!! TATTACCCATTTTTACAAGT+GGG + chr3.4:75257763-75257782 MS.gene074403:intron 25.0%
!!! TATTTCTATCATGGACATTT+TGG + chr3.4:75256601-75256620 MS.gene074403:CDS 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - chr3.4:75257361-75257380 None:intergenic 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - chr3.4:75259980-75259999 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG - chr3.4:75259071-75259090 None:intergenic 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + chr3.4:75259114-75259133 MS.gene074403:intron 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG - chr3.4:75259072-75259091 None:intergenic 25.0%
AAAGAACGGACAACTATATA+AGG - chr3.4:75257898-75257917 None:intergenic 30.0%
AAATAAGTGATGTGTCATGT+GGG - chr3.4:75257615-75257634 None:intergenic 30.0%
AAATCGGTAGTTTCACTAAA+TGG + chr3.4:75261008-75261027 MS.gene074403:CDS 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3.4:75256468-75256487 None:intergenic 30.0%
AACTCACCATCATAATGAAA+TGG - chr3.4:75256691-75256710 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + chr3.4:75260753-75260772 MS.gene074403:CDS 30.0%
AATACAGATTCAAAGTTGAC+AGG + chr3.4:75256319-75256338 MS.gene074403:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + chr3.4:75261009-75261028 MS.gene074403:CDS 30.0%
AATCTAAATGCATGATGCTT+TGG + chr3.4:75260476-75260495 MS.gene074403:intron 30.0%
AATCTGACTATCCAATTATG+GGG + chr3.4:75260308-75260327 MS.gene074403:intron 30.0%
AATTAATCAACATGTAGCAG+TGG - chr3.4:75256406-75256425 None:intergenic 30.0%
AATTGTCGACATAATAAGGA+AGG + chr3.4:75259090-75259109 MS.gene074403:intron 30.0%
ACAATCTGACTATCCAATTA+TGG + chr3.4:75260306-75260325 MS.gene074403:intron 30.0%
ACATCTCCTATACTAACATT+TGG - chr3.4:75259606-75259625 None:intergenic 30.0%
ACTGCAGTTATATTTCCATA+TGG + chr3.4:75261391-75261410 MS.gene074403:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + chr3.4:75256320-75256339 MS.gene074403:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - chr3.4:75258926-75258945 None:intergenic 30.0%
ATCTAAATGCATGATGCTTT+GGG + chr3.4:75260477-75260496 MS.gene074403:intron 30.0%
ATTAGTTGTTATATTGGAGG+GGG + chr3.4:75259629-75259648 MS.gene074403:intron 30.0%
ATTGAACCACATTTGCATAT+GGG + chr3.4:75261472-75261491 MS.gene074403:CDS 30.0%
CAAAAAAGACCTACAGAATA+AGG + chr3.4:75258744-75258763 MS.gene074403:CDS 30.0%
CAAAATGCAAACCAGTTAAA+TGG + chr3.4:75261238-75261257 MS.gene074403:CDS 30.0%
CAACGATGATTTGATGAAAT+GGG - chr3.4:75258042-75258061 None:intergenic 30.0%
CAATCTGACTATCCAATTAT+GGG + chr3.4:75260307-75260326 MS.gene074403:intron 30.0%
CAGTTATATTTCCATATGGT+TGG + chr3.4:75261395-75261414 MS.gene074403:CDS 30.0%
CATCTCAATTATCACCATTT+AGG + chr3.4:75259002-75259021 MS.gene074403:intron 30.0%
CATGCATGTATGATAAAATG+GGG - chr3.4:75260126-75260145 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + chr3.4:75258683-75258702 MS.gene074403:CDS 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + chr3.4:75256231-75256250 MS.gene074403:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - chr3.4:75258685-75258704 None:intergenic 30.0%
GAAATGCAATAATCAGTAGT+AGG - chr3.4:75260538-75260557 None:intergenic 30.0%
GCATAATATATACAAGGTTC+GGG - chr3.4:75259483-75259502 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - chr3.4:75260127-75260146 None:intergenic 30.0%
GCCAAATTTATGTCTATAGA+GGG + chr3.4:75260074-75260093 MS.gene074403:intron 30.0%
GTAGTTGTATTTGGATTAAC+TGG - chr3.4:75261166-75261185 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + chr3.4:75261166-75261185 MS.gene074403:CDS 30.0%
TAAATAAGTGATGTGTCATG+TGG - chr3.4:75257616-75257635 None:intergenic 30.0%
TATAGTTGTCCGTTCTTTAA+CGG + chr3.4:75257900-75257919 MS.gene074403:intron 30.0%
TCAGAATCACAAACTTATTG+TGG + chr3.4:75260637-75260656 MS.gene074403:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - chr3.4:75260078-75260097 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - chr3.4:75260128-75260147 None:intergenic 30.0%
TGCCAAATTTATGTCTATAG+AGG + chr3.4:75260073-75260092 MS.gene074403:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - chr3.4:75256178-75256197 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAA+AGG + chr3.4:75259063-75259082 MS.gene074403:intron 30.0%
! AAAAGTTGAAAGTATACCTG+TGG - chr3.4:75256802-75256821 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + chr3.4:75259687-75259706 MS.gene074403:intron 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3.4:75261287-75261306 MS.gene074403:CDS 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3.4:75261288-75261307 MS.gene074403:CDS 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + chr3.4:75260764-75260783 MS.gene074403:CDS 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + chr3.4:75259105-75259124 MS.gene074403:intron 30.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + chr3.4:75256139-75256158 MS.gene074403:intron 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - chr3.4:75260832-75260851 None:intergenic 30.0%
!! CTATTACCCATTTTTACAAG+TGG + chr3.4:75257762-75257781 MS.gene074403:intron 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + chr3.4:75256564-75256583 MS.gene074403:intron 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + chr3.4:75256654-75256673 MS.gene074403:CDS 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - chr3.4:75260754-75260773 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - chr3.4:75260994-75261013 None:intergenic 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - chr3.4:75258746-75258765 None:intergenic 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - chr3.4:75260761-75260780 None:intergenic 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + chr3.4:75259732-75259751 MS.gene074403:intron 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - chr3.4:75260991-75261010 None:intergenic 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG - chr3.4:75259064-75259083 None:intergenic 30.0%
AAACCACTTGAAAAAGACGA+AGG + chr3.4:75259939-75259958 MS.gene074403:intron 35.0%
AATAAGTGATGTGTCATGTG+GGG - chr3.4:75257614-75257633 None:intergenic 35.0%
AATGTGGTTCAATGTGACAA+TGG - chr3.4:75261465-75261484 None:intergenic 35.0%
ACAATGGTAGTTTCCTAACA+AGG + chr3.4:75257574-75257593 MS.gene074403:intron 35.0%
ACTAGCAATCCTTATTCTGT+AGG - chr3.4:75258756-75258775 None:intergenic 35.0%
AGAGAGCCATTTCATTATGA+TGG + chr3.4:75256682-75256701 MS.gene074403:CDS 35.0%
AGATTTGAATCACATGAGTG+GGG + chr3.4:75259875-75259894 MS.gene074403:intron 35.0%
ATACAAAAAGCCAGATTGTG+TGG + chr3.4:75255981-75256000 MS.gene074403:CDS 35.0%
ATAGTTGTCCGTTCTTTAAC+GGG + chr3.4:75257901-75257920 MS.gene074403:intron 35.0%
CAAATTGCATTGTTGTAGGT+TGG - chr3.4:75258681-75258700 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + chr3.4:75258686-75258705 MS.gene074403:CDS 35.0%
CACTAATAGGTCAAAGAAGT+TGG + chr3.4:75259220-75259239 MS.gene074403:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - chr3.4:75260363-75260382 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + chr3.4:75261471-75261490 MS.gene074403:CDS 35.0%
CCAACGATGATTTGATGAAA+TGG - chr3.4:75258043-75258062 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG + chr3.4:75257676-75257695 MS.gene074403:intron 35.0%
CCATGATAGAAATATGTACC+AGG - chr3.4:75256595-75256614 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + chr3.4:75258040-75258059 MS.gene074403:intron 35.0%
CCTTGTTAGTGTATTGTCAT+TGG - chr3.4:75257679-75257698 None:intergenic 35.0%
CTACGATTCTGCACATTAAA+CGG - chr3.4:75259313-75259332 None:intergenic 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - chr3.4:75256306-75256325 None:intergenic 35.0%
GAATAACAGTTCCTTCTGTA+TGG - chr3.4:75256101-75256120 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + chr3.4:75260640-75260659 MS.gene074403:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + chr3.4:75258408-75258427 MS.gene074403:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + chr3.4:75259874-75259893 MS.gene074403:intron 35.0%
GATGAGCATATATTTGGATG+TGG - chr3.4:75258986-75259005 None:intergenic 35.0%
GCATGCTCTTAGGAATTATT+AGG - chr3.4:75257554-75257573 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - chr3.4:75260562-75260581 None:intergenic 35.0%
TAACTGAGATGCATAGTGAT+TGG + chr3.4:75260009-75260028 MS.gene074403:intron 35.0%
TAATCCATTGGAAATCTCTC+TGG - chr3.4:75261127-75261146 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - chr3.4:75258807-75258826 None:intergenic 35.0%
TCAATCTATGGTGCAATTCA+AGG - chr3.4:75260572-75260591 None:intergenic 35.0%
TGGAGTCCTCGTATAAAATA+AGG + chr3.4:75259971-75259990 MS.gene074403:intron 35.0%
TTACACGTTTCAGTTGAATG+AGG + chr3.4:75261198-75261217 MS.gene074403:CDS 35.0%
TTATGAGACAGCTACCTAAA+TGG - chr3.4:75259019-75259038 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3.4:75261414-75261433 MS.gene074403:CDS 35.0%
TTGGTCCCACTTGTAAAAAT+GGG - chr3.4:75257771-75257790 None:intergenic 35.0%
! AAACTTTTCTCATCAACACC+TGG - chr3.4:75261343-75261362 None:intergenic 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr3.4:75257929-75257948 MS.gene074403:intron 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + chr3.4:75261263-75261282 MS.gene074403:CDS 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr3.4:75257930-75257949 MS.gene074403:intron 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3.4:75256592-75256611 MS.gene074403:CDS 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr3.4:75257926-75257945 MS.gene074403:intron 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG + chr3.4:75255887-75255906 MS.gene074403:CDS 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - chr3.4:75260855-75260874 None:intergenic 35.0%
!! ACACTGGTTTCTTGATAACT+AGG + chr3.4:75260050-75260069 MS.gene074403:intron 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + chr3.4:75255902-75255921 MS.gene074403:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + chr3.4:75255901-75255920 MS.gene074403:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3.4:75261495-75261514 MS.gene074403:CDS 35.0%
!!! AGTTTTTTTTTTGGTGGCCA+GGG + chr3.4:75259451-75259470 MS.gene074403:intron 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + chr3.4:75255896-75255915 MS.gene074403:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3.4:75261301-75261320 MS.gene074403:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3.4:75261295-75261314 MS.gene074403:CDS 35.0%
!!! TAGTTTTTTTTTTGGTGGCC+AGG + chr3.4:75259450-75259469 MS.gene074403:intron 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3.4:75261294-75261313 MS.gene074403:CDS 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - chr3.4:75259940-75259959 None:intergenic 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3.4:75258611-75258630 MS.gene074403:intron 35.0%
AAAAAATTGACAAGTGGGGG+TGG - chr3.4:75258098-75258117 None:intergenic 40.0%
AAAATAAAGCTAACACCGCG+TGG - chr3.4:75258475-75258494 None:intergenic 40.0%
AAACGTGTAAACACCGTTAC+CGG - chr3.4:75261188-75261207 None:intergenic 40.0%
AAGAAAAACCATTGCTGGCA+TGG - chr3.4:75256463-75256482 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - chr3.4:75257387-75257406 None:intergenic 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - chr3.4:75256673-75256692 None:intergenic 40.0%
ACCACATTTGCATATGGGAA+TGG + chr3.4:75261477-75261496 MS.gene074403:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - chr3.4:75256391-75256410 None:intergenic 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3.4:75261382-75261401 None:intergenic 40.0%
ATATATGTCCATGCCAGCAA+TGG + chr3.4:75256452-75256471 MS.gene074403:intron 40.0%
ATGGGAGTCCTTACTTAACA+AGG - chr3.4:75257974-75257993 None:intergenic 40.0%
ATTCATCCATGGCATTTGCA+TGG + chr3.4:75261274-75261293 MS.gene074403:CDS 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - chr3.4:75257912-75257931 None:intergenic 40.0%
CACTACCATTCCCATTTAAC+TGG - chr3.4:75261252-75261271 None:intergenic 40.0%
CAGAAGGAACTGTTATTCAC+TGG + chr3.4:75256103-75256122 MS.gene074403:CDS 40.0%
CATATGGTTGGACTGCATTA+AGG + chr3.4:75261407-75261426 MS.gene074403:CDS 40.0%
CCAAATACAACTACCGGTAA+CGG + chr3.4:75261172-75261191 MS.gene074403:CDS 40.0%
CCACACTTAAGAGCTTCTTT+AGG - chr3.4:75261544-75261563 None:intergenic 40.0%
CCACATTTGCATATGGGAAT+GGG + chr3.4:75261478-75261497 MS.gene074403:CDS 40.0%
CCATTTAAGGAGTCCTTGTT+AGG - chr3.4:75257590-75257609 None:intergenic 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + chr3.4:75261541-75261560 MS.gene074403:CDS 40.0%
CCTAACAAGGACTCCTTAAA+TGG + chr3.4:75257587-75257606 MS.gene074403:intron 40.0%
CGTTTAATGTGCAGAATCGT+AGG + chr3.4:75259311-75259330 MS.gene074403:intron 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + chr3.4:75261512-75261531 MS.gene074403:CDS 40.0%
CTTAATGCAGTCCAACCATA+TGG - chr3.4:75261409-75261428 None:intergenic 40.0%
CTTGGTCCCACTTGTAAAAA+TGG - chr3.4:75257772-75257791 None:intergenic 40.0%
GAAAACAACTCACACTCATG+TGG + chr3.4:75257467-75257486 MS.gene074403:intron 40.0%
GATTGATCCTAAGTAAGGTG+TGG - chr3.4:75261065-75261084 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + chr3.4:75261244-75261263 MS.gene074403:CDS 40.0%
GCATAGAAAACCTTGCAACT+AGG + chr3.4:75258013-75258032 MS.gene074403:intron 40.0%
GCTGTATGGTTCTCTAATAG+TGG + chr3.4:75256642-75256661 MS.gene074403:CDS 40.0%
GGAGATTTGAATCACATGAG+TGG + chr3.4:75259873-75259892 MS.gene074403:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - chr3.4:75257658-75257677 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - chr3.4:75256780-75256799 None:intergenic 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + chr3.4:75258651-75258670 MS.gene074403:CDS 40.0%
TAAATGTACAATTGGCCACG+CGG + chr3.4:75258457-75258476 MS.gene074403:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + chr3.4:75258016-75258035 MS.gene074403:intron 40.0%
TAGTTGTCCGTTCTTTAACG+GGG + chr3.4:75257902-75257921 MS.gene074403:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + chr3.4:75260324-75260343 MS.gene074403:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG + chr3.4:75260318-75260337 MS.gene074403:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG - chr3.4:75260322-75260341 None:intergenic 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3.4:75256285-75256304 MS.gene074403:CDS 40.0%
TGAGATGCATAGTGATTGGT+CGG + chr3.4:75260013-75260032 MS.gene074403:intron 40.0%
TGTTAAGTAAGGACTCCCAT+TGG + chr3.4:75257974-75257993 MS.gene074403:intron 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + chr3.4:75258650-75258669 MS.gene074403:CDS 40.0%
TGTTCGGTATCGTTCCATAA+GGG - chr3.4:75260890-75260909 None:intergenic 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3.4:75260815-75260834 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + chr3.4:75260323-75260342 MS.gene074403:intron 40.0%
TTCACCAATCCATCTCATTG+GGG - chr3.4:75256779-75256798 None:intergenic 40.0%
! ACTGTTAGAGCATCTCCAAT+GGG - chr3.4:75257992-75258011 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG + chr3.4:75256428-75256447 MS.gene074403:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - chr3.4:75256444-75256463 None:intergenic 40.0%
! ATTCCTAAGAGCATGCACAA+TGG + chr3.4:75257558-75257577 MS.gene074403:intron 40.0%
! CATGGACATATATGCCACTT+GGG - chr3.4:75256445-75256464 None:intergenic 40.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3.4:75256006-75256025 MS.gene074403:CDS 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - chr3.4:75260906-75260925 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + chr3.4:75256242-75256261 MS.gene074403:intron 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - chr3.4:75258826-75258845 None:intergenic 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - chr3.4:75257390-75257409 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + chr3.4:75260773-75260792 MS.gene074403:CDS 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - chr3.4:75260729-75260748 None:intergenic 40.0%
AAAGACGAAGGACCACGTTA+TGG + chr3.4:75259951-75259970 MS.gene074403:intron 45.0%
AATGGAATGCCCAAACACCA+GGG - chr3.4:75261447-75261466 None:intergenic 45.0%
ACAACATGCTCCACACAATC+TGG - chr3.4:75255994-75256013 None:intergenic 45.0%
ACAAGGACCACTCCCTATTA+AGG - chr3.4:75257957-75257976 None:intergenic 45.0%
ACCAACAAGCTCCATACAGA+AGG + chr3.4:75256087-75256106 MS.gene074403:CDS 45.0%
ACCACCAGAGAGATTTCCAA+TGG + chr3.4:75261120-75261139 MS.gene074403:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + chr3.4:75256742-75256761 MS.gene074403:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + chr3.4:75256713-75256732 MS.gene074403:CDS 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - chr3.4:75261121-75261140 None:intergenic 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3.4:75261365-75261384 MS.gene074403:CDS 45.0%
CACAAGCTCACATGAACAAG+AGG + chr3.4:75256738-75256757 MS.gene074403:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - chr3.4:75259300-75259319 None:intergenic 45.0%
CATTGGAGATGCTCTAACAG+TGG + chr3.4:75257991-75258010 MS.gene074403:intron 45.0%
CCAATGGAGGGTCCTTAATA+GGG + chr3.4:75257942-75257961 MS.gene074403:intron 45.0%
CCCATTCCCATATGCAAATG+TGG - chr3.4:75261481-75261500 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - chr3.4:75261175-75261194 None:intergenic 45.0%
CGATGTCATCAACTGCGAAT+GGG - chr3.4:75260688-75260707 None:intergenic 45.0%
CTACCATTGTGCATGCTCTT+AGG - chr3.4:75257564-75257583 None:intergenic 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - chr3.4:75261061-75261080 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + chr3.4:75260698-75260717 MS.gene074403:CDS 45.0%
GATTGCTAGTACTACGTCCT+TGG + chr3.4:75258766-75258785 MS.gene074403:CDS 45.0%
GCATGGACATATATGCCACT+TGG - chr3.4:75256446-75256465 None:intergenic 45.0%
GCTCCCATATTTAGCTGCTA+GGG - chr3.4:75258657-75258676 None:intergenic 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3.4:75256108-75256127 MS.gene074403:CDS 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + chr3.4:75257963-75257982 MS.gene074403:intron 45.0%
GGTTCACCAATCCATCTCAT+TGG - chr3.4:75256781-75256800 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + chr3.4:75256574-75256593 MS.gene074403:intron 45.0%
GTGTTCGGTATCGTTCCATA+AGG - chr3.4:75260891-75260910 None:intergenic 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - chr3.4:75256032-75256051 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + chr3.4:75260090-75260109 MS.gene074403:intron 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - chr3.4:75260742-75260761 None:intergenic 45.0%
TATACGAGGACTCCATAACG+TGG - chr3.4:75259966-75259985 None:intergenic 45.0%
TATTAAGGACCCTCCATTGG+AGG - chr3.4:75257942-75257961 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - chr3.4:75260979-75260998 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3.4:75261283-75261302 None:intergenic 45.0%
TCCAATGGAGGGTCCTTAAT+AGG + chr3.4:75257941-75257960 MS.gene074403:intron 45.0%
TCCATTGGAAATCTCTCTGG+TGG - chr3.4:75261124-75261143 None:intergenic 45.0%
TCCTTCTGTATGGAGCTTGT+TGG - chr3.4:75256091-75256110 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - chr3.4:75260689-75260708 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - chr3.4:75257871-75257890 None:intergenic 45.0%
TGAGCACACCCAATCCAATT+TGG - chr3.4:75260335-75260354 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - chr3.4:75258658-75258677 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - chr3.4:75258726-75258745 None:intergenic 45.0%
TGTCATGTGGGGTCCATTTA+AGG - chr3.4:75257603-75257622 None:intergenic 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + chr3.4:75255997-75256016 MS.gene074403:CDS 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + chr3.4:75257871-75257890 MS.gene074403:intron 45.0%
TTGCCAACCACACCTTACTT+AGG + chr3.4:75261055-75261074 MS.gene074403:CDS 45.0%
TTGGCTCCACATGAAGAATC+TGG - chr3.4:75258727-75258746 None:intergenic 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + chr3.4:75256620-75256639 MS.gene074403:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - chr3.4:75256723-75256742 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + chr3.4:75255996-75256015 MS.gene074403:CDS 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + chr3.4:75256619-75256638 MS.gene074403:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + chr3.4:75261427-75261446 MS.gene074403:CDS 45.0%
! CACTGTTAGAGCATCTCCAA+TGG - chr3.4:75257993-75258012 None:intergenic 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + chr3.4:75260650-75260669 MS.gene074403:CDS 45.0%
! GTTGGTGAGGTCAATGACAA+GGG - chr3.4:75256073-75256092 None:intergenic 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + chr3.4:75256241-75256260 MS.gene074403:intron 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - chr3.4:75256039-75256058 None:intergenic 45.0%
! TGTTGGTGAGGTCAATGACA+AGG - chr3.4:75256074-75256093 None:intergenic 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3.4:75261308-75261327 MS.gene074403:CDS 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - chr3.4:75259945-75259964 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3.4:75261307-75261326 MS.gene074403:CDS 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + chr3.4:75258337-75258356 MS.gene074403:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + chr3.4:75259710-75259729 MS.gene074403:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + chr3.4:75258386-75258405 MS.gene074403:intron 5.0%
AAATGGGCCACCTAGTTGCA+AGG - chr3.4:75258026-75258045 None:intergenic 50.0%
AGGCAGATAACCCTGGTGTT+TGG + chr3.4:75261434-75261453 MS.gene074403:CDS 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - chr3.4:75257881-75257900 None:intergenic 50.0%
ATCGTGCGGTGTGAGGATTT+CGG - chr3.4:75260965-75260984 None:intergenic 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3.4:75256768-75256787 None:intergenic 50.0%
CAATGGAATGCCCAAACACC+AGG - chr3.4:75261448-75261467 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG + chr3.4:75259513-75259532 MS.gene074403:intron 50.0%
CCCTATTAAGGACCCTCCAT+TGG - chr3.4:75257945-75257964 None:intergenic 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG - chr3.4:75259516-75259535 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - chr3.4:75257870-75257889 None:intergenic 50.0%
GGAATCAATGGCCAGTTTCC+AGG + chr3.4:75256018-75256037 MS.gene074403:CDS 50.0%
GGAGTTGGCATGTGAAACAC+TGG + chr3.4:75260034-75260053 MS.gene074403:intron 50.0%
GGCAGATAACCCTGGTGTTT+GGG + chr3.4:75261435-75261454 MS.gene074403:CDS 50.0%
GGCTCCACATGAAGAATCTG+GGG - chr3.4:75258725-75258744 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG + chr3.4:75261322-75261341 MS.gene074403:CDS 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + chr3.4:75260785-75260804 MS.gene074403:CDS 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + chr3.4:75258781-75258800 MS.gene074403:CDS 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + chr3.4:75257870-75257889 MS.gene074403:intron 50.0%
TATAAGGACCCTCTCTCTCC+TGG - chr3.4:75257882-75257901 None:intergenic 50.0%
TCACTGGCATGGAATCAGAC+AGG + chr3.4:75256119-75256138 MS.gene074403:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + chr3.4:75256772-75256791 MS.gene074403:CDS 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3.4:75256767-75256786 MS.gene074403:CDS 50.0%
TGCACCCCAGATTCTTCATG+TGG + chr3.4:75258718-75258737 MS.gene074403:CDS 50.0%
! AGCTTGCTCATCAATGGACG+AGG + chr3.4:75258617-75258636 MS.gene074403:CDS 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + chr3.4:75260019-75260038 MS.gene074403:intron 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - chr3.4:75260881-75260900 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - chr3.4:75260942-75260961 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - chr3.4:75260878-75260897 None:intergenic 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + chr3.4:75256249-75256268 MS.gene074403:CDS 50.0%
!! CTGTATGGAGCTTGTTGGTG+AGG - chr3.4:75256086-75256105 None:intergenic 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + chr3.4:75256783-75256802 MS.gene074403:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - chr3.4:75260866-75260885 None:intergenic 50.0%
!! TAAGTGTGGTGCTACAGCCT+AGG + chr3.4:75261555-75261574 MS.gene074403:CDS 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + chr3.4:75256628-75256647 MS.gene074403:CDS 55.0%
CACCACCAGTCACACCCTTA+TGG + chr3.4:75260873-75260892 MS.gene074403:CDS 55.0%
GGAGGGTCCTTAATAGGGAG+TGG + chr3.4:75257947-75257966 MS.gene074403:intron 55.0%
TGTGAGGATTTCGGTGGCTG+TGG - chr3.4:75260956-75260975 None:intergenic 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - chr3.4:75260875-75260894 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - chr3.4:75258786-75258805 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + chr3.4:75260343-75260362 MS.gene074403:intron 55.0%
GAGGAGAATCGTGCGGTGTG+AGG - chr3.4:75260972-75260991 None:intergenic 60.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3.4:75256261-75256280 None:intergenic 60.0%
GTGCGGTGTGAGGATTTCGG+TGG - chr3.4:75260962-75260981 None:intergenic 60.0%
GTGGGACCCGTTAGTTACCC+AGG + chr3.4:75257861-75257880 MS.gene074403:intron 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG - chr3.4:75260806-75260825 None:intergenic 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - chr3.4:75259471-75259490 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 75255880 75261576 75255880 ID=MS.gene074403
chr3.4 mRNA 75255880 75261576 75255880 ID=MS.gene074403.t1;Parent=MS.gene074403
chr3.4 exon 75255880 75256140 75255880 ID=MS.gene074403.t1.exon1;Parent=MS.gene074403.t1
chr3.4 CDS 75255880 75256140 75255880 ID=cds.MS.gene074403.t1;Parent=MS.gene074403.t1
chr3.4 exon 75256249 75256341 75256249 ID=MS.gene074403.t1.exon2;Parent=MS.gene074403.t1
chr3.4 CDS 75256249 75256341 75256249 ID=cds.MS.gene074403.t1;Parent=MS.gene074403.t1
chr3.4 exon 75256592 75256804 75256592 ID=MS.gene074403.t1.exon3;Parent=MS.gene074403.t1
chr3.4 CDS 75256592 75256804 75256592 ID=cds.MS.gene074403.t1;Parent=MS.gene074403.t1
chr3.4 exon 75258617 75258811 75258617 ID=MS.gene074403.t1.exon4;Parent=MS.gene074403.t1
chr3.4 CDS 75258617 75258811 75258617 ID=cds.MS.gene074403.t1;Parent=MS.gene074403.t1
chr3.4 exon 75260641 75261576 75260641 ID=MS.gene074403.t1.exon5;Parent=MS.gene074403.t1
chr3.4 CDS 75260641 75261576 75260641 ID=cds.MS.gene074403.t1;Parent=MS.gene074403.t1
Gene Sequence

>MS.gene074403

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACCCTTGTCATTGACCTCACCAACAAGCTCCATACAGAAGGAACTGTTATTCACTGGCATGGAATCAGACAGGTAAATTCTTAGTTCTAGTGGTTTTGATCATGAACCAAAGTACCAGTCTAGTTATAATTAAATATTACATTAATTCTTTGTTGTTAATTACTGTAAAAATGTTTGCAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGGTAATTAATTAATTAATTAATTAAATTTTAGTTCTCTGTTCTATGACCTCTTTTTCTGTTTCCACTGCTACATGTTGATTAATTTGATCACATTTTTGACCCCAAGTGGCATATATGTCCATGCCAGCAATGGTTTTTCTTTTGTTTTTTTGATTACATATTTTATTTTATTTTATAATACTATATAATATAATTAGAGCTAGGTACATATATATATAATATTAACTGGTTGGTGTTAAATATGGTGCAGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGGTATACTTTCAACTTTTCATATATACAAAAATATCATGATCATTCAATTTTTATTTATTTTATTTTATCAAATATTAAAAACAGCTATGTGTACAATAAAAGTTTTTACGTAAAAAAATAATAAAAATTTAAAATAATAATAAAAATATAATATAATTTAACTCGTATACATTGTCCTTGTAAAGAAACTTTTACACTTTCAATCAATAACAATCGTTAGATCTTTAAAAATGTTTGACATTTCTCATTCTTGCATAAGTTATGCTTGAATGTGTTTTTTCTTGTACTCTTAACTAGTTTTAAAGTTGTCATGATCGGTTGAATGTGTAAAACTTCTTAAACTAACATTGAACAAAAATTGAACTCTTAAAATAACTTACTCGTTATACATCTTTAATTTCTTCATTGTAAAATGTTACTTATAAAAAATAAAATTATTTGATATCTAGAACATTTTAAAGCATAATAACTTTTGGCTTATGAATATGATTACGCTAAAGAATTTCATAACTAATTAACATAAGACTTCTTCTCACTATACTTTTCATCATCACCAATGATACTCTTTATTTGTGACATCCACCATATGAGCATTAGTGCTTTCCTTTTTCATATGAATATGATGTCTTTGATCTGTAAACCAGACAATAAAATTCTTGAAAGAAAACAACTCACACTCATGTGGCATAGAAATAAAAATTGAAAATTGGGAAAGAATAAAGAGTCATCTTCCCATTCACCTAATACCTAATAATTCCTAAGAGCATGCACAATGGTAGTTTCCTAACAAGGACTCCTTAAATGGACCCCACATGACACATCACTTATTTATGATTTTTTAATAAAAGTACCTATTAAGGACTCAATGACTCCAATGACAATACACTAACAAGGACTCCAATGAAAAGTACTTAAATATGTCCCACTATCTTTATATATTAAACAAAAATAATTTATCTATTACCCATTTTTACAAGTGGGACCAAGTAGTACACATTTTATTACTTCTTTATGCAAGTGGGACCAAGTAGTACACATTTTATTACTTTTTTAAACGTGGGACCCGTTAGTTACCCAGGAGAGAGAGGGTCCTTATATAGTTGTCCGTTCTTTAACGGGGACTCAATTTTTCTTCCTCCAATGGAGGGTCCTTAATAGGGAGTGGTCCTTGTTAAGTAAGGACTCCCATTGGAGATGCTCTAACAGTGGCATAGAAAACCTTGCAACTAGGTGGCCCATTTCATCAAATCATCGTTGGAATTTTTCTATAATGGTGAACTCTCGCAGTTGCCACCCCCACTTGTCAATTTTTTTTTTCAACAACACATCTTTCAAGACAATAGAAATATGAACTGGTATTCTTAAAAAAAAAATATGAACTGGTACAAATTTTTCTACTTTTTTTTTTGGACAAATTTTTCTACTTGTATTATACTTATTTTATCTTTTTTTTATAAAAAAATTGTAAGTTAATATGAACTGGTACAAATTTTTTCTTCTTATTTTATCCTTTAAATTTTAATCAAGACAAAAAATTTCAAAAATAAAATAAAGGAAAGCATCGTATTACAGTATAAATATTTAAAATTATAATTTAATCATGGACAGTACCAAGAAAGATAATGGAATAGTATTATTTTTCATTCTTTTGGTAAATGTACAATTGGCCACGCGGTGTTAGCTTTATTTTGACGCAAAAAGAGAAAGACAATCAGAAGAAACGAACAAAAGAAACAGTGTATTTTTCTTAAAATAATTGCATGCGTAACCTTTTATGAATGATAATATAGTATTTGTTTATTTGTTTTTTAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAGTGAGTTTTCTCCTAGCTATGACCCACTACATATATGATATATGTTTGCATTATTTCAATATATATATCGTTGTATTTCTTTCTTATTAATTTATATTATTCTGTCATATTCCAATTAGTTTGTGTGTGTCTATTTTGCATATCATTATTAGGGTTATATCATTATTGCTTCCACATCCAAATATATGCTCATCTCAATTATCACCATTTAGGTAGCTGTCTCATAATTAAGATAGTAGTACTTCATTTCCTTGTTCCCACCAAATAAAAAAGGAATCAATTGTCGACATAATAAGGAAGGTTTACTTTTAAGAGGAAATTCCGGAGATTAATAGTCTAATTCATGGAAAACGAATGAAATAATTTAGGAACAGTAGGTGTGTGTTTAAAGCAGCGTAAGAAAAACTTCACTAATAGGTCAAAGAAGTTGGAAAAAATATCTTTGAAAAAATGTTTTAGATATGGAAATCTACGACTTCGTGTGTCCAGCTCAAGTAGCCGTTTAATGTGCAGAATCGTAGGAATTAAAAATTAAGGTTTTGCGTGTCTTAAAACACATGTTAAATTTTACTTCAATACTTTGTAAGAAAAAAACTTTAACTTCAATAGGAACTCCATTTATTCTTTTTTAAATATCATAGTTTTTTTTTTGGTGGCCAGGGTTCGAACCCGAACCTTGTATATATTATGCATTGTCATTACCAACTGAGCTTAACTCACGAGGACTAAATATTGTAGTTTGACTATTTTACATTATTCGTATCTTATTTTAATGATATTATTTTATAAAGCCAAATGTTAGTATAGGAGATGTTCAATTAGTTGTTATATTGGAGGGGGATTCTGATTGATGTACAAATGTTATAAACACTCAGAATTGTCGCATCAATTGTTTTGGTTAAAAATCATTAATTAATATGGCAATTCTGATTGTTTTGATTGGTTGTATTTAAAAAAACAAACATATACATTCAAATAAATGAAGCGGTACCAACAAAAAATAATTCTATAAAGCTGAAAAAACACTAGTCAATTAACCTTTAAATGTTATAATGATGAACGGAGATTTGAATCACATGAGTGGGGATTAGTGAGTTGTCAAACGTGCGACAAAAAATAGTAGATCCAAACCACTTGAAAAAGACGAAGGACCACGTTATGGAGTCCTCGTATAAAATAAGGAAAAGAAAACAACGTTAACTGAGATGCATAGTGATTGGTCGGAGTTGGCATGTGAAACACTGGTTTCTTGATAACTAGGTGCCAAATTTATGTCTATAGAGGGAATCACATCTTGCAGGAATGAAATCTCCCCATTTTATCATACATGCATGCACTTTCATTCAAATCAACAACTGTATTACATAAGTGTACAAAATTCAAATTCGAATTAAATATTGTTTCATTGGTTGGACTCAATTGATTCATGAACTTCACGTTAAATTATTTAGGAAAAGTTGAATTTAAATCTTGGTTGGTTGTTAGATTTTACTTACAATCTGACTATCCAATTATGGGGACCAAATTGGATTGGGTGTGCTCAAAGCACCATGGTTTGTTAGATCAACATGAGACAATATGTTTTTCAACTTTACCAAATAACATTTTTAATAAAACTTAAAATAGTGATTGTTTGATCTTGATCTAACGACCAAGATATTCTAAATCTAAATGCATGATGCTTTGGGAGTAGTCACTGATTTTGATAAATTTTCACATAAAACCTACTACTGATTATTGCATTTCTCCATATCATTCCTTGAATTGCACCATAGATTGATTCATTATTTCATGAAATAACATTGCCCCATAATTTCTGTTTGTTTCAGAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>MS.gene074403.t1

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA