Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31464.t1 | XP_013465104.1 | 98.5 | 393 | 6 | 0 | 1 | 393 | 38 | 430 | 9.00E-235 | 822.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31464.t1 | Q7Y223 | 69.7 | 380 | 113 | 1 | 1 | 380 | 40 | 417 | 1.6e-163 | 577.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31464.t1 | A0A072VAS9 | 98.5 | 393 | 6 | 0 | 1 | 393 | 38 | 430 | 6.5e-235 | 822.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050560 | MS.gene31464 | 0.815944 | 7.13E-52 | -1.69E-46 |
| MS.gene050787 | MS.gene31464 | 0.800421 | 1.45E-48 | -1.69E-46 |
| MS.gene050959 | MS.gene31464 | 0.817627 | 2.99E-52 | -1.69E-46 |
| MS.gene051265 | MS.gene31464 | 0.812071 | 5.10E-51 | -1.69E-46 |
| MS.gene054467 | MS.gene31464 | 0.818373 | 2.03E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene31464 | 0.811167 | 8.01E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene31464 | 0.821134 | 4.75E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene31464 | 0.826063 | 3.33E-54 | -1.69E-46 |
| MS.gene055358 | MS.gene31464 | 0.836519 | 8.92E-57 | -1.69E-46 |
| MS.gene055804 | MS.gene31464 | 0.928152 | 4.32E-92 | -1.69E-46 |
| MS.gene056792 | MS.gene31464 | 0.811513 | 6.74E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene31464 | 0.831297 | 1.81E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene31464 | 0.82425 | 8.94E-54 | -1.69E-46 |
| MS.gene059609 | MS.gene31464 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene060480 | MS.gene31464 | 0.818874 | 1.56E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene31464 | -0.804154 | 2.47E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31464.t1 | MTR_2g090390 | 98.473 | 393 | 6 | 0 | 1 | 393 | 38 | 430 | 0.0 | 813 |
| MS.gene31464.t1 | MTR_4g078230 | 71.320 | 394 | 110 | 2 | 1 | 393 | 37 | 428 | 0.0 | 589 |
| MS.gene31464.t1 | MTR_8g005670 | 47.989 | 373 | 191 | 2 | 4 | 376 | 64 | 433 | 1.37e-132 | 388 |
| MS.gene31464.t1 | MTR_7g073550 | 47.594 | 374 | 193 | 2 | 3 | 376 | 58 | 428 | 4.32e-131 | 384 |
| MS.gene31464.t1 | MTR_7g073550 | 47.594 | 374 | 193 | 2 | 3 | 376 | 59 | 429 | 4.46e-131 | 384 |
| MS.gene31464.t1 | MTR_7g073620 | 47.326 | 374 | 194 | 2 | 3 | 376 | 11 | 381 | 6.72e-131 | 382 |
| MS.gene31464.t1 | MTR_8g005270 | 47.185 | 373 | 194 | 2 | 4 | 376 | 47 | 416 | 4.79e-130 | 381 |
| MS.gene31464.t1 | MTR_8g006550 | 47.059 | 374 | 195 | 2 | 3 | 376 | 66 | 436 | 4.92e-130 | 382 |
| MS.gene31464.t1 | MTR_5g020890 | 47.594 | 374 | 192 | 2 | 2 | 375 | 30 | 399 | 8.45e-130 | 380 |
| MS.gene31464.t1 | MTR_4g043760 | 44.772 | 373 | 200 | 3 | 3 | 375 | 34 | 400 | 5.51e-125 | 367 |
| MS.gene31464.t1 | MTR_7g111740 | 45.767 | 378 | 196 | 4 | 2 | 379 | 61 | 429 | 1.05e-123 | 364 |
| MS.gene31464.t1 | MTR_1g085430 | 44.591 | 379 | 203 | 4 | 2 | 379 | 31 | 403 | 5.62e-122 | 359 |
| MS.gene31464.t1 | MTR_1g085310 | 44.974 | 378 | 202 | 4 | 2 | 379 | 28 | 399 | 2.72e-121 | 357 |
| MS.gene31464.t1 | MTR_1g085420 | 44.180 | 378 | 206 | 3 | 2 | 379 | 31 | 403 | 3.70e-120 | 354 |
| MS.gene31464.t1 | MTR_3g112060 | 43.799 | 379 | 202 | 5 | 3 | 379 | 26 | 395 | 4.40e-120 | 354 |
| MS.gene31464.t1 | MTR_1g085350 | 43.272 | 379 | 206 | 5 | 2 | 379 | 88 | 458 | 5.48e-115 | 343 |
| MS.gene31464.t1 | MTR_1g085320 | 41.361 | 382 | 198 | 6 | 1 | 379 | 29 | 387 | 4.95e-105 | 315 |
| MS.gene31464.t1 | MTR_0005s0150 | 42.667 | 300 | 166 | 3 | 76 | 375 | 8 | 301 | 3.93e-91 | 277 |
| MS.gene31464.t1 | MTR_7g073320 | 36.111 | 108 | 55 | 1 | 269 | 376 | 15 | 108 | 1.46e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31464.t1 | AT2G20680 | 69.737 | 380 | 113 | 1 | 1 | 380 | 40 | 417 | 0.0 | 571 |
| MS.gene31464.t1 | AT4G28320 | 68.702 | 393 | 119 | 2 | 1 | 393 | 39 | 427 | 0.0 | 568 |
| MS.gene31464.t1 | AT5G01930 | 46.649 | 373 | 196 | 2 | 4 | 376 | 48 | 417 | 2.36e-128 | 377 |
| MS.gene31464.t1 | AT5G66460 | 45.722 | 374 | 197 | 3 | 2 | 375 | 30 | 397 | 5.60e-123 | 362 |
| MS.gene31464.t1 | AT3G10900 | 44.032 | 377 | 205 | 5 | 2 | 376 | 28 | 400 | 5.23e-122 | 359 |
| MS.gene31464.t1 | AT3G10890 | 42.520 | 381 | 212 | 5 | 2 | 380 | 30 | 405 | 9.16e-118 | 348 |
| MS.gene31464.t1 | AT1G02310 | 42.559 | 383 | 206 | 6 | 2 | 379 | 28 | 401 | 2.80e-111 | 332 |
| MS.gene31464.t1 | AT1G02310 | 42.559 | 383 | 206 | 6 | 2 | 379 | 48 | 421 | 4.11e-111 | 332 |
| MS.gene31464.t1 | AT3G30540 | 38.348 | 339 | 167 | 5 | 2 | 339 | 28 | 325 | 2.67e-84 | 260 |
Find 94 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAAAACTGGGGCTAATA+TGG | 0.184464 | 2.4:+10270203 | MS.gene31464:CDS |
| GAAATCAATATCAGAGATTT+TGG | 0.195187 | 2.4:-10273461 | None:intergenic |
| TGACCGTCAACCCCAATTAT+TGG | 0.222691 | 2.4:+10273404 | MS.gene31464:CDS |
| AAGTCTGGATGCCCAATAAT+TGG | 0.233607 | 2.4:-10273416 | None:intergenic |
| GAGGAATATTCTGATGATTA+TGG | 0.283488 | 2.4:+10274085 | MS.gene31464:CDS |
| TGAATGGGTGGAATTCTTAT+TGG | 0.297092 | 2.4:+10270130 | MS.gene31464:CDS |
| GACCGTCAACCCCAATTATT+GGG | 0.317018 | 2.4:+10273405 | MS.gene31464:CDS |
| TAGTTTGGCAATTCTTAGTT+GGG | 0.322364 | 2.4:+10274056 | MS.gene31464:CDS |
| GTCATTTCTATATTCAATTC+CGG | 0.324364 | 2.4:-10272861 | None:intergenic |
| GTTCGTCAAATGCTGAAAAC+TGG | 0.331006 | 2.4:+10270192 | MS.gene31464:CDS |
| TTGAAATAACTACGGATTGA+TGG | 0.340488 | 2.4:-10271706 | None:intergenic |
| CTGGAGCAGGCGCTTTAGTT+TGG | 0.343911 | 2.4:+10274041 | MS.gene31464:CDS |
| TTAGTTTGGCAATTCTTAGT+TGG | 0.347632 | 2.4:+10274055 | MS.gene31464:CDS |
| GGGTTGACGGTCAAATCCTT+TGG | 0.352850 | 2.4:-10273394 | None:intergenic |
| GTGGAATTCTTATTGGTTGA+TGG | 0.368784 | 2.4:+10270137 | MS.gene31464:CDS |
| GTCAAATCCTTTGGGTCATT+AGG | 0.369609 | 2.4:-10273385 | None:intergenic |
| AGTCTGGATGCCCAATAATT+GGG | 0.376159 | 2.4:-10273415 | None:intergenic |
| AAGCAAGGCAAAATGGAATA+AGG | 0.383619 | 2.4:+10271566 | MS.gene31464:CDS |
| GGTCGGATACAGTGAAGTTC+TGG | 0.391879 | 2.4:-10273958 | None:intergenic |
| TATAAAACAATCATGCAGAT+TGG | 0.397582 | 2.4:+10274147 | MS.gene31464:CDS |
| CCGGTCCTGTTCTCCGAATA+CGG | 0.405166 | 2.4:+10273920 | MS.gene31464:CDS |
| GGTTGACGGTCAAATCCTTT+GGG | 0.409738 | 2.4:-10273393 | None:intergenic |
| GACTCACTGTTTGTAGAACT+TGG | 0.410613 | 2.4:+10270226 | MS.gene31464:CDS |
| GTAAATAACTTGCAACCATA+TGG | 0.414901 | 2.4:+10271604 | MS.gene31464:CDS |
| AGCAATGCTTACCATTGATC+CGG | 0.418166 | 2.4:-10273502 | None:intergenic |
| ATAAAACAATCATGCAGATT+GGG | 0.418742 | 2.4:+10274148 | MS.gene31464:CDS |
| CATTCCCCACGGTCAGCATA+TGG | 0.420083 | 2.4:-10273348 | None:intergenic |
| ATAGCAGAAGCAAGGCAAAA+TGG | 0.422959 | 2.4:+10271559 | MS.gene31464:CDS |
| GAAGGGATGGATTAATCAAC+AGG | 0.435221 | 2.4:+10274177 | MS.gene31464:CDS |
| GATATAATCAGACCCAAGTC+TGG | 0.436740 | 2.4:-10273431 | None:intergenic |
| ATAATCCGTATTCGGAGAAC+AGG | 0.448568 | 2.4:-10273925 | None:intergenic |
| AGAACTTGGGCTTTCAATGA+TGG | 0.449779 | 2.4:+10270240 | MS.gene31464:CDS |
| TACTGACTCTTCCCACCATA+TGG | 0.450859 | 2.4:-10271619 | None:intergenic |
| TCAAATGGGCATGGCAAGAA+GGG | 0.452269 | 2.4:+10271644 | MS.gene31464:CDS |
| AATTATTGGGCATCCAGACT+TGG | 0.454898 | 2.4:+10273418 | MS.gene31464:CDS |
| TGTGTTGATCGACTTTCCGC+TGG | 0.459954 | 2.4:-10274115 | None:intergenic |
| ATCATAGAAGAATGAATCAT+TGG | 0.463317 | 2.4:-10271683 | None:intergenic |
| ATGCTGACCGTGGGGAATGA+AGG | 0.467308 | 2.4:+10273352 | MS.gene31464:CDS |
| TTCGTCAAATGCTGAAAACT+GGG | 0.478082 | 2.4:+10270193 | MS.gene31464:CDS |
| CTGAAAACTGGGGCTAATAT+GGG | 0.484284 | 2.4:+10270204 | MS.gene31464:CDS |
| GGAAGAGTCAGTATGTCAAA+TGG | 0.484963 | 2.4:+10271629 | MS.gene31464:CDS |
| GACTTGGGTCTGATTATATC+CGG | 0.485591 | 2.4:+10273434 | MS.gene31464:CDS |
| TTCATATCTACCCGGATCAA+TGG | 0.488013 | 2.4:+10273491 | MS.gene31464:CDS |
| AACTGAAATTTGTCAACAAG+TGG | 0.489345 | 2.4:+10273855 | MS.gene31464:CDS |
| TCTGCTAAGAGAAACAAGTC+TGG | 0.492117 | 2.4:+10274022 | MS.gene31464:CDS |
| GTCAAATGGGCATGGCAAGA+AGG | 0.494866 | 2.4:+10271643 | MS.gene31464:CDS |
| ATGCTTTCCCACATTGAAGA+TGG | 0.497123 | 2.4:+10273878 | MS.gene31464:CDS |
| ACTCACTGTTTGTAGAACTT+GGG | 0.499364 | 2.4:+10270227 | MS.gene31464:CDS |
| CGTTGCATGACTGATCGTTC+CGG | 0.503031 | 2.4:+10272920 | MS.gene31464:CDS |
| TGCCCAATAATTGGGGTTGA+CGG | 0.509521 | 2.4:-10273407 | None:intergenic |
| GCAAGTTATTTACTAAGCAA+AGG | 0.522679 | 2.4:-10271594 | None:intergenic |
| GGGACACAGTTTGTGTTGGA+TGG | 0.524754 | 2.4:+10270093 | MS.gene31464:CDS |
| ATTATTGGGCATCCAGACTT+GGG | 0.530301 | 2.4:+10273419 | MS.gene31464:CDS |
| TTTCCTGCAGGAGTGGATAG+AGG | 0.531846 | 2.4:+10273291 | MS.gene31464:intron |
| TGTAATTCTTGAAATAACTA+CGG | 0.536027 | 2.4:-10271714 | None:intergenic |
| AAGAGAAACAAGTCTGGAGC+AGG | 0.538235 | 2.4:+10274028 | MS.gene31464:CDS |
| ACTTACTTGGAGAGTGTCGC+CGG | 0.539104 | 2.4:-10272939 | None:intergenic |
| GAAGAGTCAGTATGTCAAAT+GGG | 0.540890 | 2.4:+10271630 | MS.gene31464:CDS |
| CACCTCAGTTCATATCTACC+CGG | 0.542770 | 2.4:+10273483 | MS.gene31464:CDS |
| GATTGGGCAAAGCGAAGGGA+TGG | 0.552832 | 2.4:+10274164 | MS.gene31464:CDS |
| ATGCAGATTGGGCAAAGCGA+AGG | 0.557745 | 2.4:+10274159 | MS.gene31464:CDS |
| AATAACTTGCAACCATATGG+TGG | 0.566863 | 2.4:+10271607 | MS.gene31464:CDS |
| ATAGAAGAATGAATCATTGG+AGG | 0.570905 | 2.4:-10271680 | None:intergenic |
| TTATGGTCCTAATGACCCAA+AGG | 0.573542 | 2.4:+10273378 | MS.gene31464:CDS |
| TTATTTCAAGAATTACATCA+AGG | 0.573575 | 2.4:+10271720 | MS.gene31464:CDS |
| TTCTGCAGACTGTCTTGACA+AGG | 0.576048 | 2.4:+10272825 | MS.gene31464:intron |
| GTCAGTATGTCAAATGGGCA+TGG | 0.579900 | 2.4:+10271635 | MS.gene31464:CDS |
| TGCAGATTGGGCAAAGCGAA+GGG | 0.579913 | 2.4:+10274160 | MS.gene31464:CDS |
| AATGCTCTTCAAATTTCACC+TGG | 0.579990 | 2.4:+10270270 | MS.gene31464:CDS |
| GTGTTGATCGACTTTCCGCT+GGG | 0.580201 | 2.4:-10274114 | None:intergenic |
| GTTTGGCAATTCTTAGTTGG+GGG | 0.582836 | 2.4:+10274058 | MS.gene31464:CDS |
| TGGGCATGGCAAGAAGGGGT+AGG | 0.584409 | 2.4:+10271649 | MS.gene31464:CDS |
| AAATGGGACACAGTTTGTGT+TGG | 0.586472 | 2.4:+10270089 | MS.gene31464:CDS |
| GCAATGCTTACCATTGATCC+GGG | 0.587323 | 2.4:-10273501 | None:intergenic |
| AGTTTGGCAATTCTTAGTTG+GGG | 0.590382 | 2.4:+10274057 | MS.gene31464:CDS |
| CCGTATTCGGAGAACAGGAC+CGG | 0.591091 | 2.4:-10273920 | None:intergenic |
| TTCATCGCCATCTTCAATGT+GGG | 0.596395 | 2.4:-10273885 | None:intergenic |
| GGACACAGTTTGTGTTGGAT+GGG | 0.598899 | 2.4:+10270094 | MS.gene31464:CDS |
| GTCTGGATGCCCAATAATTG+GGG | 0.607898 | 2.4:-10273414 | None:intergenic |
| CGATGAAGTACTGAAGAAGC+CGG | 0.608266 | 2.4:+10273901 | MS.gene31464:CDS |
| AAGAACCATATGCTGACCGT+GGG | 0.609672 | 2.4:+10273343 | MS.gene31464:CDS |
| ATAACTTGCAACCATATGGT+GGG | 0.615616 | 2.4:+10271608 | MS.gene31464:CDS |
| CTTCATCGCCATCTTCAATG+TGG | 0.618456 | 2.4:-10273886 | None:intergenic |
| ACTTGTTCATCAAAGTGACC+AGG | 0.634282 | 2.4:-10270288 | None:intergenic |
| GGAGTGGATAGAGGAAATGT+CGG | 0.641246 | 2.4:+10273300 | MS.gene31464:intron |
| ATTACGTCATAGCAGAAGCA+AGG | 0.656346 | 2.4:+10271551 | MS.gene31464:CDS |
| CAAATGGGCATGGCAAGAAG+GGG | 0.658594 | 2.4:+10271645 | MS.gene31464:CDS |
| ATAAAAGCCTTCATTCCCCA+CGG | 0.670702 | 2.4:-10273359 | None:intergenic |
| CAAGAACCATATGCTGACCG+TGG | 0.671483 | 2.4:+10273342 | MS.gene31464:CDS |
| TCGTCAAATGCTGAAAACTG+GGG | 0.702936 | 2.4:+10270194 | MS.gene31464:CDS |
| ATCCGGGTAGATATGAACTG+AGG | 0.729379 | 2.4:-10273485 | None:intergenic |
| TGATTATGGAATCGTCCCAG+CGG | 0.733894 | 2.4:+10274099 | MS.gene31464:CDS |
| GAACGATCAGTCATGCAACG+AGG | 0.746364 | 2.4:-10272917 | None:intergenic |
| AGAACCATATGCTGACCGTG+GGG | 0.750263 | 2.4:+10273344 | MS.gene31464:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGAAATATATAATAAAATA+AGG | + | chr2.4:10273254-10273273 | MS.gene31464:intron | 10.0% |
| !!! | TTAATTATAACTTTTTGAAT+AGG | + | chr2.4:10273801-10273820 | MS.gene31464:intron | 10.0% |
| !! | AAAATTAAGTACTTGAAATT+TGG | - | chr2.4:10271224-10271243 | None:intergenic | 15.0% |
| !! | TCAATATCAAATAGAAAAAA+TGG | - | chr2.4:10273211-10273230 | None:intergenic | 15.0% |
| !! | TTATAAACAATTATAATCAC+AGG | - | chr2.4:10270631-10270650 | None:intergenic | 15.0% |
| !! | TTATTATATATTTCACAACA+TGG | - | chr2.4:10273250-10273269 | None:intergenic | 15.0% |
| !! | TTTCTATTCTTCAAAAATAA+TGG | - | chr2.4:10271493-10271512 | None:intergenic | 15.0% |
| !!! | ATTTAATAATACTTTTGTAC+TGG | + | chr2.4:10271926-10271945 | MS.gene31464:intron | 15.0% |
| !!! | TTTTTCTATAAACATTTGAA+GGG | - | chr2.4:10272982-10273001 | None:intergenic | 15.0% |
| !! | AAGTAAAACATAAATCTCTA+AGG | - | chr2.4:10271263-10271282 | None:intergenic | 20.0% |
| !! | AGTTATCATATGACAATTAA+AGG | - | chr2.4:10271902-10271921 | None:intergenic | 20.0% |
| !! | TGTAATTCTTGAAATAACTA+CGG | - | chr2.4:10271717-10271736 | None:intergenic | 20.0% |
| !! | TTATTATTCTTAAACTCAGT+AGG | + | chr2.4:10271957-10271976 | MS.gene31464:intron | 20.0% |
| !! | TTATTTCAAGAATTACATCA+AGG | + | chr2.4:10271720-10271739 | MS.gene31464:CDS | 20.0% |
| !!! | ATACTTCTTTTACTCAATAA+AGG | + | chr2.4:10272389-10272408 | MS.gene31464:intron | 20.0% |
| !!! | CATAAAAAACTAATTTGTGT+CGG | - | chr2.4:10270441-10270460 | None:intergenic | 20.0% |
| !!! | CTTTTTCTATAAACATTTGA+AGG | - | chr2.4:10272983-10273002 | None:intergenic | 20.0% |
| !!! | TGACTTGTTTTTTGTTTTTT+GGG | + | chr2.4:10270479-10270498 | MS.gene31464:intron | 20.0% |
| ! | AAAACTTTCTTTCCTTCAAT+CGG | - | chr2.4:10271413-10271432 | None:intergenic | 25.0% |
| ! | AACAACATGAAACTATGAAA+GGG | - | chr2.4:10270414-10270433 | None:intergenic | 25.0% |
| ! | ACATAATCAGAACAAATCAT+AGG | - | chr2.4:10270382-10270401 | None:intergenic | 25.0% |
| ! | AGAAGTAAGAAAAGGTTATA+AGG | + | chr2.4:10273678-10273697 | MS.gene31464:intron | 25.0% |
| ! | AGATACCTAGTTTATTAGTT+TGG | - | chr2.4:10270682-10270701 | None:intergenic | 25.0% |
| ! | ATAAAACAATCATGCAGATT+GGG | + | chr2.4:10274148-10274167 | MS.gene31464:CDS | 25.0% |
| ! | ATAGAAATTATGCTGAACTA+AGG | + | chr2.4:10271506-10271525 | MS.gene31464:intron | 25.0% |
| ! | ATCATAGAAGAATGAATCAT+TGG | - | chr2.4:10271686-10271705 | None:intergenic | 25.0% |
| ! | GAAGATTGAATCAAATATAC+AGG | + | chr2.4:10272115-10272134 | MS.gene31464:intron | 25.0% |
| ! | GAAGTAAGAAAAGGTTATAA+GGG | + | chr2.4:10273679-10273698 | MS.gene31464:intron | 25.0% |
| ! | GTCATTTCTATATTCAATTC+CGG | - | chr2.4:10272864-10272883 | None:intergenic | 25.0% |
| ! | TATAAAACAATCATGCAGAT+TGG | + | chr2.4:10274147-10274166 | MS.gene31464:CDS | 25.0% |
| ! | TATAATAATGGTATCTTGCT+GGG | + | chr2.4:10270646-10270665 | MS.gene31464:intron | 25.0% |
| ! | TCAATGAAGCTTGAAAAATA+AGG | - | chr2.4:10272526-10272545 | None:intergenic | 25.0% |
| ! | TTATAATAATGGTATCTTGC+TGG | + | chr2.4:10270645-10270664 | MS.gene31464:intron | 25.0% |
| !! | AAAACTTGTTTCCTTAAGTA+AGG | - | chr2.4:10272316-10272335 | None:intergenic | 25.0% |
| !! | AATAAACTAGGTATCTTTTG+TGG | + | chr2.4:10270686-10270705 | MS.gene31464:intron | 25.0% |
| !! | CTGACATAATGACTTTAAAA+AGG | - | chr2.4:10271862-10271881 | None:intergenic | 25.0% |
| !! | GAAATCAATATCAGAGATTT+TGG | - | chr2.4:10273464-10273483 | None:intergenic | 25.0% |
| !! | TACCTAGTAAACACAATTTT+AGG | - | chr2.4:10271064-10271083 | None:intergenic | 25.0% |
| !! | TTACTTAAGGAAACAAGTTT+TGG | + | chr2.4:10272315-10272334 | MS.gene31464:intron | 25.0% |
| !! | TTGTTTCATACATCTTTTCT+CGG | - | chr2.4:10273982-10274001 | None:intergenic | 25.0% |
| !!! | CAGATTTTTTTTTTATGACC+AGG | - | chr2.4:10271375-10271394 | None:intergenic | 25.0% |
| !!! | CTTTTTTGATAATCCGTATT+CGG | - | chr2.4:10273936-10273955 | None:intergenic | 25.0% |
| !!! | GACTTGTTTTTTGTTTTTTG+GGG | + | chr2.4:10270480-10270499 | MS.gene31464:intron | 25.0% |
| !!! | GTGACTTGTTTTTTGTTTTT+TGG | + | chr2.4:10270478-10270497 | MS.gene31464:intron | 25.0% |
| AAACTTTCTTTCCTTCAATC+GGG | - | chr2.4:10271412-10271431 | None:intergenic | 30.0% | |
| AAAGTATGTGTTATGGGTAT+GGG | + | chr2.4:10273617-10273636 | MS.gene31464:intron | 30.0% | |
| AACTCCTATGTCAGATAAAA+TGG | - | chr2.4:10272063-10272082 | None:intergenic | 30.0% | |
| AACTGAAATTTGTCAACAAG+TGG | + | chr2.4:10273855-10273874 | MS.gene31464:CDS | 30.0% | |
| AATAAAGGAGTAGTGAGAAA+GGG | + | chr2.4:10272404-10272423 | MS.gene31464:intron | 30.0% | |
| AATTATGCTGAACTAAGGAT+TGG | + | chr2.4:10271511-10271530 | MS.gene31464:intron | 30.0% | |
| AATTGTGTTTACTAGGTAGA+TGG | + | chr2.4:10271066-10271085 | MS.gene31464:intron | 30.0% | |
| ACAACTGAATATGGCAAAAT+TGG | + | chr2.4:10273136-10273155 | MS.gene31464:intron | 30.0% | |
| ACAAGGAAAAATTCTTTCAC+CGG | + | chr2.4:10272842-10272861 | MS.gene31464:CDS | 30.0% | |
| AGAATCCTTTGTATTGAACT+TGG | - | chr2.4:10273173-10273192 | None:intergenic | 30.0% | |
| AGCATTGCTTGAACTTTATA+AGG | + | chr2.4:10273516-10273535 | MS.gene31464:intron | 30.0% | |
| AGTTATGTACTTGTTCCTTT+AGG | + | chr2.4:10270753-10270772 | MS.gene31464:intron | 30.0% | |
| ATACGTAAGAAAACAGAAAG+TGG | - | chr2.4:10272589-10272608 | None:intergenic | 30.0% | |
| ATAGAAGAATGAATCATTGG+AGG | - | chr2.4:10271683-10271702 | None:intergenic | 30.0% | |
| ATGAAGAAGAAATTTGACCT+AGG | - | chr2.4:10272696-10272715 | None:intergenic | 30.0% | |
| CAAAATTTCCACTATGAGTA+GGG | + | chr2.4:10273592-10273611 | MS.gene31464:intron | 30.0% | |
| CAACAACATGAAACTATGAA+AGG | - | chr2.4:10270415-10270434 | None:intergenic | 30.0% | |
| CATTTATGCTCAAAGTCATT+GGG | + | chr2.4:10273562-10273581 | MS.gene31464:intron | 30.0% | |
| CTCCTAAAATTGTGTTTACT+AGG | + | chr2.4:10271059-10271078 | MS.gene31464:intron | 30.0% | |
| GACATGTACTTAGTTAATTG+AGG | + | chr2.4:10270923-10270942 | MS.gene31464:intron | 30.0% | |
| GAGGAATATTCTGATGATTA+TGG | + | chr2.4:10274085-10274104 | MS.gene31464:CDS | 30.0% | |
| GCAAGTTATTTACTAAGCAA+AGG | - | chr2.4:10271597-10271616 | None:intergenic | 30.0% | |
| GTTATGTACTTGTTCCTTTA+GGG | + | chr2.4:10270754-10270773 | MS.gene31464:intron | 30.0% | |
| TATGACCTAAACGGTAAAAA+AGG | - | chr2.4:10272169-10272188 | None:intergenic | 30.0% | |
| TCATTTATGCTCAAAGTCAT+TGG | + | chr2.4:10273561-10273580 | MS.gene31464:intron | 30.0% | |
| TTATGACCAGGAATTGAAAT+CGG | - | chr2.4:10271363-10271382 | None:intergenic | 30.0% | |
| TTCTATAAACATTTGAAGGG+TGG | - | chr2.4:10272979-10272998 | None:intergenic | 30.0% | |
| ! | AAAAGTATGTGTTATGGGTA+TGG | + | chr2.4:10273616-10273635 | MS.gene31464:intron | 30.0% |
| ! | AATTAAAGGCATACAACATG+TGG | - | chr2.4:10271888-10271907 | None:intergenic | 30.0% |
| ! | AATTTTGCCATATTCAGTTG+TGG | - | chr2.4:10273137-10273156 | None:intergenic | 30.0% |
| ! | AGGGTAAAAGTATGTGTTAT+GGG | + | chr2.4:10273611-10273630 | MS.gene31464:intron | 30.0% |
| ! | CTTTGATGAACAAGTTTTTC+AGG | + | chr2.4:10270296-10270315 | MS.gene31464:CDS | 30.0% |
| ! | GAACTTTTTAATCTCCTCAT+GGG | - | chr2.4:10273056-10273075 | None:intergenic | 30.0% |
| ! | GAATCAAATATACAGGCTTT+TGG | + | chr2.4:10272122-10272141 | MS.gene31464:intron | 30.0% |
| ! | GGAATGTGTTTTATGTGAAT+GGG | + | chr2.4:10270115-10270134 | MS.gene31464:CDS | 30.0% |
| ! | GTAAATAACTTGCAACCATA+TGG | + | chr2.4:10271604-10271623 | MS.gene31464:CDS | 30.0% |
| ! | TAGGGTAAAAGTATGTGTTA+TGG | + | chr2.4:10273610-10273629 | MS.gene31464:intron | 30.0% |
| ! | TGAACTTTTTAATCTCCTCA+TGG | - | chr2.4:10273057-10273076 | None:intergenic | 30.0% |
| ! | TTAACCATTTTCAACCCTAA+AGG | - | chr2.4:10270771-10270790 | None:intergenic | 30.0% |
| ! | TTCCCTTTTAGATTTGTCTT+CGG | + | chr2.4:10273763-10273782 | MS.gene31464:intron | 30.0% |
| ! | TTGAAATAACTACGGATTGA+TGG | - | chr2.4:10271709-10271728 | None:intergenic | 30.0% |
| AAGCAAGGCAAAATGGAATA+AGG | + | chr2.4:10271566-10271585 | MS.gene31464:CDS | 35.0% | |
| AAGGTTAAGAATTTGCGTGT+GGG | - | chr2.4:10272507-10272526 | None:intergenic | 35.0% | |
| AATCAATTCCCAGCCAAAAA+TGG | - | chr2.4:10272891-10272910 | None:intergenic | 35.0% | |
| AATGCTCTTCAAATTTCACC+TGG | + | chr2.4:10270270-10270289 | MS.gene31464:CDS | 35.0% | |
| AATGTTGAAATCTTTCCTGC+AGG | + | chr2.4:10273279-10273298 | MS.gene31464:intron | 35.0% | |
| ACACAAGCCATAGAAAACAT+AGG | - | chr2.4:10271983-10272002 | None:intergenic | 35.0% | |
| ACCAAAACGTTAAAGGAAAC+AGG | - | chr2.4:10272562-10272581 | None:intergenic | 35.0% | |
| ACTCACTGTTTGTAGAACTT+GGG | + | chr2.4:10270227-10270246 | MS.gene31464:CDS | 35.0% | |
| AGGGACCAAACTAATAAACT+AGG | + | chr2.4:10270674-10270693 | MS.gene31464:intron | 35.0% | |
| CAATAAAGGAGTAGTGAGAA+AGG | + | chr2.4:10272403-10272422 | MS.gene31464:intron | 35.0% | |
| CCAAAATTTCCACTATGAGT+AGG | + | chr2.4:10273591-10273610 | MS.gene31464:intron | 35.0% | |
| CCAAAGATACAAGCTTCATA+TGG | - | chr2.4:10272669-10272688 | None:intergenic | 35.0% | |
| CCATATGAAGCTTGTATCTT+TGG | + | chr2.4:10272666-10272685 | MS.gene31464:intron | 35.0% | |
| CCTATGTTCTATGACCTAAA+CGG | - | chr2.4:10272178-10272197 | None:intergenic | 35.0% | |
| CTATGTCAGATAAAATGGTC+TGG | - | chr2.4:10272058-10272077 | None:intergenic | 35.0% | |
| CTGTGAAGCAAAGAATTAGA+CGG | + | chr2.4:10272457-10272476 | MS.gene31464:intron | 35.0% | |
| GAAGAGTCAGTATGTCAAAT+GGG | + | chr2.4:10271630-10271649 | MS.gene31464:CDS | 35.0% | |
| GATCTCTAATGAACTTGTCA+TGG | + | chr2.4:10273100-10273119 | MS.gene31464:intron | 35.0% | |
| GGTAGAATACAGAGAAAAAG+TGG | + | chr2.4:10270973-10270992 | MS.gene31464:intron | 35.0% | |
| GTAGATGGGAAAAATAGCAT+CGG | - | chr2.4:10272276-10272295 | None:intergenic | 35.0% | |
| TAAGGTTAAGAATTTGCGTG+TGG | - | chr2.4:10272508-10272527 | None:intergenic | 35.0% | |
| TAATATGTCCTTTATGACCG+AGG | + | chr2.4:10271282-10271301 | MS.gene31464:intron | 35.0% | |
| TAGATGGGAAAAATAGCATC+GGG | - | chr2.4:10272275-10272294 | None:intergenic | 35.0% | |
| TAGTCAGAGTCTAACGTTAT+CGG | - | chr2.4:10272204-10272223 | None:intergenic | 35.0% | |
| TGAATGGGTGGAATTCTTAT+TGG | + | chr2.4:10270130-10270149 | MS.gene31464:CDS | 35.0% | |
| TGAGTGTGATTATGTCTCAT+AGG | + | chr2.4:10270578-10270597 | MS.gene31464:intron | 35.0% | |
| TGGGAAATTGACCCAAAAAA+CGG | + | chr2.4:10271151-10271170 | MS.gene31464:intron | 35.0% | |
| TGGTGAAACCAAAACGTTAA+AGG | - | chr2.4:10272569-10272588 | None:intergenic | 35.0% | |
| TGTCACCAAGTTCAATACAA+AGG | + | chr2.4:10273165-10273184 | MS.gene31464:intron | 35.0% | |
| TTCGTCAAATGCTGAAAACT+GGG | + | chr2.4:10270193-10270212 | MS.gene31464:CDS | 35.0% | |
| TTTCTCTCCACAACTGAATA+TGG | + | chr2.4:10273127-10273146 | MS.gene31464:intron | 35.0% | |
| TTTCTGTTATACCCGATTGA+AGG | + | chr2.4:10271398-10271417 | MS.gene31464:intron | 35.0% | |
| ! | AAAGGAAGAAAGGTATGCAT+TGG | - | chr2.4:10272483-10272502 | None:intergenic | 35.0% |
| ! | AATAACTTGCAACCATATGG+TGG | + | chr2.4:10271607-10271626 | MS.gene31464:CDS | 35.0% |
| ! | ACCTGTTTCCTTTAACGTTT+TGG | + | chr2.4:10272558-10272577 | MS.gene31464:intron | 35.0% |
| ! | ACTAATATCCGAGTGTTGTT+GGG | + | chr2.4:10272220-10272239 | MS.gene31464:intron | 35.0% |
| ! | ACTCAGTCATGCACAATTTT+AGG | - | chr2.4:10270563-10270582 | None:intergenic | 35.0% |
| ! | ATAACTTGCAACCATATGGT+GGG | + | chr2.4:10271608-10271627 | MS.gene31464:CDS | 35.0% |
| ! | ATGTGTTTTATGTGAATGGG+TGG | + | chr2.4:10270118-10270137 | MS.gene31464:CDS | 35.0% |
| ! | ATTTTTCCCATCTACAAGAC+TGG | + | chr2.4:10272281-10272300 | MS.gene31464:intron | 35.0% |
| ! | CAGACCATTTTATCTGACAT+AGG | + | chr2.4:10272056-10272075 | MS.gene31464:intron | 35.0% |
| ! | CTTTTTGAATAGGTTTCACG+AGG | + | chr2.4:10273811-10273830 | MS.gene31464:intron | 35.0% |
| ! | GGGAATGTGTTTTATGTGAA+TGG | + | chr2.4:10270114-10270133 | MS.gene31464:CDS | 35.0% |
| ! | GTGGAATTCTTATTGGTTGA+TGG | + | chr2.4:10270137-10270156 | MS.gene31464:CDS | 35.0% |
| ! | GTTTGTAGCTCTTGATTTTC+TGG | + | chr2.4:10270335-10270354 | MS.gene31464:intron | 35.0% |
| ! | TAACCTTTTCTTACTTCTGC+AGG | - | chr2.4:10273676-10273695 | None:intergenic | 35.0% |
| ! | TACTTTTACCCTACTCATAG+TGG | - | chr2.4:10273603-10273622 | None:intergenic | 35.0% |
| ! | TTCATACATCTTTTCTCGGT+CGG | - | chr2.4:10273978-10273997 | None:intergenic | 35.0% |
| ! | TTTTGTCCATCATGAAACCT+GGG | + | chr2.4:10271132-10271151 | MS.gene31464:intron | 35.0% |
| !! | ATGGGTTTTGTGATGAGAAA+TGG | + | chr2.4:10270072-10270091 | MS.gene31464:CDS | 35.0% |
| !! | ATTATATGTTGACTCCCATG+AGG | + | chr2.4:10273039-10273058 | MS.gene31464:intron | 35.0% |
| !! | CCTACTCATAGTGGAAATTT+TGG | - | chr2.4:10273594-10273613 | None:intergenic | 35.0% |
| !! | CTCATAGTGGAAATTTTGGT+CGG | - | chr2.4:10273590-10273609 | None:intergenic | 35.0% |
| !! | TGGGTTTTGTGATGAGAAAT+GGG | + | chr2.4:10270073-10270092 | MS.gene31464:CDS | 35.0% |
| !! | TGTTCCTTTAGGGTTGAAAA+TGG | + | chr2.4:10270764-10270783 | MS.gene31464:intron | 35.0% |
| !!! | AGGATGCTATTAGTTTTCGA+AGG | - | chr2.4:10272798-10272817 | None:intergenic | 35.0% |
| !!! | CTTGTATCTTTGGTTTTCCT+AGG | + | chr2.4:10272676-10272695 | MS.gene31464:intron | 35.0% |
| !!! | TATCAGAGATTTTGGAGTTC+CGG | - | chr2.4:10273456-10273475 | None:intergenic | 35.0% |
| !!! | TGGTACCTTTTTTACCGTTT+AGG | + | chr2.4:10272161-10272180 | MS.gene31464:intron | 35.0% |
| AAATGGGACACAGTTTGTGT+TGG | + | chr2.4:10270089-10270108 | MS.gene31464:CDS | 40.0% | |
| AAGAATTTGCGTGTGGGAAA+AGG | - | chr2.4:10272501-10272520 | None:intergenic | 40.0% | |
| AAGTCTGGATGCCCAATAAT+TGG | - | chr2.4:10273419-10273438 | None:intergenic | 40.0% | |
| AATTATTGGGCATCCAGACT+TGG | + | chr2.4:10273418-10273437 | MS.gene31464:CDS | 40.0% | |
| AATTCCCAGCCAAAAATGGT+GGG | - | chr2.4:10272887-10272906 | None:intergenic | 40.0% | |
| ACAGTCTGCAGAAAACTCAA+AGG | - | chr2.4:10272818-10272837 | None:intergenic | 40.0% | |
| ACGCCGAAGACAAATCTAAA+AGG | - | chr2.4:10273769-10273788 | None:intergenic | 40.0% | |
| ACTGAGTTACCATCGTTTCT+GGG | + | chr2.4:10270946-10270965 | MS.gene31464:intron | 40.0% | |
| ACTTGTTCATCAAAGTGACC+AGG | - | chr2.4:10270291-10270310 | None:intergenic | 40.0% | |
| AGAACTTGGGCTTTCAATGA+TGG | + | chr2.4:10270240-10270259 | MS.gene31464:CDS | 40.0% | |
| AGCAATGCTTACCATTGATC+CGG | - | chr2.4:10273505-10273524 | None:intergenic | 40.0% | |
| AGCATTTGCCAAAATCACAG+TGG | - | chr2.4:10270838-10270857 | None:intergenic | 40.0% | |
| AGTCTGGATGCCCAATAATT+GGG | - | chr2.4:10273418-10273437 | None:intergenic | 40.0% | |
| ATAAAAGCCTTCATTCCCCA+CGG | - | chr2.4:10273362-10273381 | None:intergenic | 40.0% | |
| ATAATCCGTATTCGGAGAAC+AGG | - | chr2.4:10273928-10273947 | None:intergenic | 40.0% | |
| ATAATGGTATCTTGCTGGGA+AGG | + | chr2.4:10270650-10270669 | MS.gene31464:intron | 40.0% | |
| ATAGCAGAAGCAAGGCAAAA+TGG | + | chr2.4:10271559-10271578 | MS.gene31464:CDS | 40.0% | |
| ATGCTTTCCCACATTGAAGA+TGG | + | chr2.4:10273878-10273897 | MS.gene31464:CDS | 40.0% | |
| ATTACGTCATAGCAGAAGCA+AGG | + | chr2.4:10271551-10271570 | MS.gene31464:CDS | 40.0% | |
| ATTATTGGGCATCCAGACTT+GGG | + | chr2.4:10273419-10273438 | MS.gene31464:CDS | 40.0% | |
| ATTGACCCAAAAAACGGTGT+CGG | + | chr2.4:10271157-10271176 | MS.gene31464:intron | 40.0% | |
| CAACCTGCAGAAGTAAGAAA+AGG | + | chr2.4:10273670-10273689 | MS.gene31464:intron | 40.0% | |
| CAAGCTTCATATGGAAGTCA+TGG | - | chr2.4:10272660-10272679 | None:intergenic | 40.0% | |
| CAATTTCCCAGGTTTCATGA+TGG | - | chr2.4:10271141-10271160 | None:intergenic | 40.0% | |
| CCGTTTAGGTCATAGAACAT+AGG | + | chr2.4:10272175-10272194 | MS.gene31464:intron | 40.0% | |
| CGCCGAAGACAAATCTAAAA+GGG | - | chr2.4:10273768-10273787 | None:intergenic | 40.0% | |
| CTCATAGGTCTTTGCAAAAG+TGG | + | chr2.4:10270593-10270612 | MS.gene31464:intron | 40.0% | |
| CTGAAAACTGGGGCTAATAT+GGG | + | chr2.4:10270204-10270223 | MS.gene31464:CDS | 40.0% | |
| CTGTGAGTTTGGCAAATTCA+TGG | - | chr2.4:10270895-10270914 | None:intergenic | 40.0% | |
| GACTCACTGTTTGTAGAACT+TGG | + | chr2.4:10270226-10270245 | MS.gene31464:CDS | 40.0% | |
| GACTTGGGTCTGATTATATC+CGG | + | chr2.4:10273434-10273453 | MS.gene31464:CDS | 40.0% | |
| GATATAATCAGACCCAAGTC+TGG | - | chr2.4:10273434-10273453 | None:intergenic | 40.0% | |
| GGAACTTGAGACCTTACTTA+AGG | + | chr2.4:10272302-10272321 | MS.gene31464:intron | 40.0% | |
| GGAAGAGTCAGTATGTCAAA+TGG | + | chr2.4:10271629-10271648 | MS.gene31464:CDS | 40.0% | |
| GGATCTGACAAGCAATATGT+TGG | + | chr2.4:10271087-10271106 | MS.gene31464:intron | 40.0% | |
| GTCAAATCCTTTGGGTCATT+AGG | - | chr2.4:10273388-10273407 | None:intergenic | 40.0% | |
| GTCTGAATTGACTGTGAGTT+TGG | - | chr2.4:10270906-10270925 | None:intergenic | 40.0% | |
| GTTCGTCAAATGCTGAAAAC+TGG | + | chr2.4:10270192-10270211 | MS.gene31464:CDS | 40.0% | |
| GTTGTGTTACAGTTTCAGAG+TGG | - | chr2.4:10273654-10273673 | None:intergenic | 40.0% | |
| TCGTCAAATGCTGAAAACTG+GGG | + | chr2.4:10270194-10270213 | MS.gene31464:CDS | 40.0% | |
| TCTGCTAAGAGAAACAAGTC+TGG | + | chr2.4:10274022-10274041 | MS.gene31464:CDS | 40.0% | |
| TTATGGTCCTAATGACCCAA+AGG | + | chr2.4:10273378-10273397 | MS.gene31464:CDS | 40.0% | |
| TTATGTGTGAGTGTGTGTTG+TGG | + | chr2.4:10270456-10270475 | MS.gene31464:intron | 40.0% | |
| TTCATATCTACCCGGATCAA+TGG | + | chr2.4:10273491-10273510 | MS.gene31464:CDS | 40.0% | |
| TTCATCGCCATCTTCAATGT+GGG | - | chr2.4:10273888-10273907 | None:intergenic | 40.0% | |
| ! | AAAGAGTGCACAAACTGAGT+AGG | - | chr2.4:10270539-10270558 | None:intergenic | 40.0% |
| ! | AAGAGTGCACAAACTGAGTA+GGG | - | chr2.4:10270538-10270557 | None:intergenic | 40.0% |
| ! | ACTAAGGATTGGTATGTGAC+AGG | + | chr2.4:10271522-10271541 | MS.gene31464:intron | 40.0% |
| ! | AGAAATGACCCCACCATTTT+TGG | + | chr2.4:10272875-10272894 | MS.gene31464:CDS | 40.0% |
| ! | CAAGTTCCAGTCTTGTAGAT+GGG | - | chr2.4:10272290-10272309 | None:intergenic | 40.0% |
| ! | CAGTAGGCCTATGTTTTCTA+TGG | + | chr2.4:10271973-10271992 | MS.gene31464:intron | 40.0% |
| ! | CGATTTTTCGTCGCGATTTA+AGG | + | chr2.4:10270170-10270189 | MS.gene31464:CDS | 40.0% |
| ! | CTTTTGTCCATCATGAAACC+TGG | + | chr2.4:10271131-10271150 | MS.gene31464:intron | 40.0% |
| ! | GACTAATATCCGAGTGTTGT+TGG | + | chr2.4:10272219-10272238 | MS.gene31464:intron | 40.0% |
| ! | TCAAGTTCCAGTCTTGTAGA+TGG | - | chr2.4:10272291-10272310 | None:intergenic | 40.0% |
| ! | TTTTCGAAGGATAGCCTCAA+GGG | - | chr2.4:10272785-10272804 | None:intergenic | 40.0% |
| !! | CAGGTTTCATGATGGACAAA+AGG | - | chr2.4:10271133-10271152 | None:intergenic | 40.0% |
| !! | GAAGGGATGGATTAATCAAC+AGG | + | chr2.4:10274177-10274196 | MS.gene31464:CDS | 40.0% |
| !! | GGTAAAAAAGGTACCATCAC+TGG | - | chr2.4:10272157-10272176 | None:intergenic | 40.0% |
| !! | TGGAAGTGTTGTGAACTTCA+GGG | + | chr2.4:10271334-10271353 | MS.gene31464:intron | 40.0% |
| !!! | AAACACCGACACCGTTTTTT+GGG | - | chr2.4:10271165-10271184 | None:intergenic | 40.0% |
| !!! | GAAACAAGTTTTGGTGTCAC+TGG | + | chr2.4:10272324-10272343 | MS.gene31464:intron | 40.0% |
| !!! | GTTTTTTGGGTCAATTTCCC+AGG | - | chr2.4:10271152-10271171 | None:intergenic | 40.0% |
| AAGAACCATATGCTGACCGT+GGG | + | chr2.4:10273343-10273362 | MS.gene31464:CDS | 45.0% | |
| AAGAATGCCACTCCAACCAT+TGG | - | chr2.4:10271821-10271840 | None:intergenic | 45.0% | |
| AGAGCTTACCCTCCTTTATG+GGG | - | chr2.4:10272252-10272271 | None:intergenic | 45.0% | |
| ATCCGGGTAGATATGAACTG+AGG | - | chr2.4:10273488-10273507 | None:intergenic | 45.0% | |
| ATTCCCAGCCAAAAATGGTG+GGG | - | chr2.4:10272886-10272905 | None:intergenic | 45.0% | |
| CAATTCCCAGCCAAAAATGG+TGG | - | chr2.4:10272888-10272907 | None:intergenic | 45.0% | |
| CACCTCAGTTCATATCTACC+CGG | + | chr2.4:10273483-10273502 | MS.gene31464:CDS | 45.0% | |
| CTTCATCGCCATCTTCAATG+TGG | - | chr2.4:10273889-10273908 | None:intergenic | 45.0% | |
| GACCGTCAACCCCAATTATT+GGG | + | chr2.4:10273405-10273424 | MS.gene31464:CDS | 45.0% | |
| GACTGAGTTACCATCGTTTC+TGG | + | chr2.4:10270945-10270964 | MS.gene31464:intron | 45.0% | |
| GAGAGCTTACCCTCCTTTAT+GGG | - | chr2.4:10272253-10272272 | None:intergenic | 45.0% | |
| GATTGGTATGTGACAGGCTT+TGG | + | chr2.4:10271528-10271547 | MS.gene31464:intron | 45.0% | |
| GCAATGCTTACCATTGATCC+GGG | - | chr2.4:10273504-10273523 | None:intergenic | 45.0% | |
| GCTGAAAACTGGGGCTAATA+TGG | + | chr2.4:10270203-10270222 | MS.gene31464:CDS | 45.0% | |
| GGACACAGTTTGTGTTGGAT+GGG | + | chr2.4:10270094-10270113 | MS.gene31464:CDS | 45.0% | |
| GGAGTGGATAGAGGAAATGT+CGG | + | chr2.4:10273300-10273319 | MS.gene31464:intron | 45.0% | |
| GGGGAAAGGAGAAAGAGAAA+AGG | - | chr2.4:10271775-10271794 | None:intergenic | 45.0% | |
| GGTTGACGGTCAAATCCTTT+GGG | - | chr2.4:10273396-10273415 | None:intergenic | 45.0% | |
| GTCAGTATGTCAAATGGGCA+TGG | + | chr2.4:10271635-10271654 | MS.gene31464:CDS | 45.0% | |
| GTCTGGATGCCCAATAATTG+GGG | - | chr2.4:10273417-10273436 | None:intergenic | 45.0% | |
| TCAAATGGGCATGGCAAGAA+GGG | + | chr2.4:10271644-10271663 | MS.gene31464:CDS | 45.0% | |
| TCGCAGGTGAAAGACTTACT+TGG | - | chr2.4:10272955-10272974 | None:intergenic | 45.0% | |
| TGAAATCTTTCCTGCAGGAG+TGG | + | chr2.4:10273284-10273303 | MS.gene31464:intron | 45.0% | |
| TGACCGTCAACCCCAATTAT+TGG | + | chr2.4:10273404-10273423 | MS.gene31464:CDS | 45.0% | |
| TGATTATGGAATCGTCCCAG+CGG | + | chr2.4:10274099-10274118 | MS.gene31464:CDS | 45.0% | |
| TGCCCAATAATTGGGGTTGA+CGG | - | chr2.4:10273410-10273429 | None:intergenic | 45.0% | |
| TTCTGCAGACTGTCTTGACA+AGG | + | chr2.4:10272825-10272844 | MS.gene31464:intron | 45.0% | |
| TTGGAAGTTGAGACCAGTGA+TGG | + | chr2.4:10272141-10272160 | MS.gene31464:intron | 45.0% | |
| ! | AAGAGAAACAAGTCTGGAGC+AGG | + | chr2.4:10274028-10274047 | MS.gene31464:CDS | 45.0% |
| ! | GTGGGGAATGAAGGCTTTTA+TGG | + | chr2.4:10273361-10273380 | MS.gene31464:CDS | 45.0% |
| ! | GTTTTCGAAGGATAGCCTCA+AGG | - | chr2.4:10272786-10272805 | None:intergenic | 45.0% |
| ! | TTACCATCGTTTCTGGGAAG+TGG | + | chr2.4:10270952-10270971 | MS.gene31464:intron | 45.0% |
| !! | CGATGAAGTACTGAAGAAGC+CGG | + | chr2.4:10273901-10273920 | MS.gene31464:CDS | 45.0% |
| !! | GGAAGTGTTGTGAACTTCAG+GGG | + | chr2.4:10271335-10271354 | MS.gene31464:intron | 45.0% |
| !! | GTGGAAGTGTTGTGAACTTC+AGG | + | chr2.4:10271333-10271352 | MS.gene31464:intron | 45.0% |
| !! | TACTGACTCTTCCCACCATA+TGG | - | chr2.4:10271622-10271641 | None:intergenic | 45.0% |
| !!! | GAAACACCGACACCGTTTTT+TGG | - | chr2.4:10271166-10271185 | None:intergenic | 45.0% |
| !! | ATTATAATTGTTTATAATAA+TGG | + | chr2.4:10270634-10270653 | MS.gene31464:intron | 5.0% |
| AATGCCACTCCAACCATTGG+AGG | - | chr2.4:10271818-10271837 | None:intergenic | 50.0% | |
| ACATTTGAAGGGTGGATCGC+AGG | - | chr2.4:10272971-10272990 | None:intergenic | 50.0% | |
| AGAACCATATGCTGACCGTG+GGG | + | chr2.4:10273344-10273363 | MS.gene31464:CDS | 50.0% | |
| AGTGGCAAGCGATCTCTCTA+TGG | + | chr2.4:10270991-10271010 | MS.gene31464:intron | 50.0% | |
| ATGCAGATTGGGCAAAGCGA+AGG | + | chr2.4:10274159-10274178 | MS.gene31464:CDS | 50.0% | |
| ATGCCACTCCAACCATTGGA+GGG | - | chr2.4:10271817-10271836 | None:intergenic | 50.0% | |
| CAAATGGGCATGGCAAGAAG+GGG | + | chr2.4:10271645-10271664 | MS.gene31464:CDS | 50.0% | |
| CAAGAACCATATGCTGACCG+TGG | + | chr2.4:10273342-10273361 | MS.gene31464:CDS | 50.0% | |
| CGTTGCATGACTGATCGTTC+CGG | + | chr2.4:10272920-10272939 | MS.gene31464:CDS | 50.0% | |
| CTACCACTTCCCAGAAACGA+TGG | - | chr2.4:10270958-10270977 | None:intergenic | 50.0% | |
| CTCTATGTTTGCAGCCCTTG+AGG | + | chr2.4:10272768-10272787 | MS.gene31464:intron | 50.0% | |
| GAACGATCAGTCATGCAACG+AGG | - | chr2.4:10272920-10272939 | None:intergenic | 50.0% | |
| GCGTGTGGGAAAAGGAAGAA+AGG | - | chr2.4:10272493-10272512 | None:intergenic | 50.0% | |
| GGAGAGCTTACCCTCCTTTA+TGG | - | chr2.4:10272254-10272273 | None:intergenic | 50.0% | |
| GGGACACAGTTTGTGTTGGA+TGG | + | chr2.4:10270093-10270112 | MS.gene31464:CDS | 50.0% | |
| GGGTTGACGGTCAAATCCTT+TGG | - | chr2.4:10273397-10273416 | None:intergenic | 50.0% | |
| GGTAAAGAGAAAGGGGGGAA+AGG | - | chr2.4:10271789-10271808 | None:intergenic | 50.0% | |
| GGTCGGATACAGTGAAGTTC+TGG | - | chr2.4:10273961-10273980 | None:intergenic | 50.0% | |
| GTCAAATGGGCATGGCAAGA+AGG | + | chr2.4:10271643-10271662 | MS.gene31464:CDS | 50.0% | |
| TGCAGATTGGGCAAAGCGAA+GGG | + | chr2.4:10274160-10274179 | MS.gene31464:CDS | 50.0% | |
| TTTCCTCTATCCACTCCTGC+AGG | - | chr2.4:10273297-10273316 | None:intergenic | 50.0% | |
| TTTCCTGCAGGAGTGGATAG+AGG | + | chr2.4:10273291-10273310 | MS.gene31464:intron | 50.0% | |
| ! | ATCCGAGTGTTGTTGGGAAG+AGG | + | chr2.4:10272226-10272245 | MS.gene31464:intron | 50.0% |
| ! | GTGTTGATCGACTTTCCGCT+GGG | - | chr2.4:10274117-10274136 | None:intergenic | 50.0% |
| ! | TGTGTTGATCGACTTTCCGC+TGG | - | chr2.4:10274118-10274137 | None:intergenic | 50.0% |
| !! | ACAGCGTGCCACTGTGATTT+TGG | + | chr2.4:10270827-10270846 | MS.gene31464:intron | 50.0% |
| !! | ACTTACTTGGAGAGTGTCGC+CGG | - | chr2.4:10272942-10272961 | None:intergenic | 50.0% |
| !! | GGGGTACCGATTTCAATTCC+TGG | + | chr2.4:10271354-10271373 | MS.gene31464:intron | 50.0% |
| !!! | ATGACCCCACCATTTTTGGC+TGG | + | chr2.4:10272879-10272898 | MS.gene31464:CDS | 50.0% |
| !!! | TGACCCCACCATTTTTGGCT+GGG | + | chr2.4:10272880-10272899 | MS.gene31464:CDS | 50.0% |
| ACAGCAAGATTGCACCGCTG+CGG | - | chr2.4:10272441-10272460 | None:intergenic | 55.0% | |
| AGGGCGTGGGGTAAAGAGAA+AGG | - | chr2.4:10271798-10271817 | None:intergenic | 55.0% | |
| ATGCTGACCGTGGGGAATGA+AGG | + | chr2.4:10273352-10273371 | MS.gene31464:CDS | 55.0% | |
| CAACCACTTGCGCTAGACCT+CGG | - | chr2.4:10271302-10271321 | None:intergenic | 55.0% | |
| CATTCCCCACGGTCAGCATA+TGG | - | chr2.4:10273351-10273370 | None:intergenic | 55.0% | |
| CCGGTCCTGTTCTCCGAATA+CGG | + | chr2.4:10273920-10273939 | MS.gene31464:CDS | 55.0% | |
| CCGTATTCGGAGAACAGGAC+CGG | - | chr2.4:10273923-10273942 | None:intergenic | 55.0% | |
| CGTGGGGTAAAGAGAAAGGG+GGG | - | chr2.4:10271794-10271813 | None:intergenic | 55.0% | |
| CTGGAGCAGGCGCTTTAGTT+TGG | + | chr2.4:10274041-10274060 | MS.gene31464:CDS | 55.0% | |
| GATTGGGCAAAGCGAAGGGA+TGG | + | chr2.4:10274164-10274183 | MS.gene31464:CDS | 55.0% | |
| GCGCTAGACCTCGGTCATAA+AGG | - | chr2.4:10271293-10271312 | None:intergenic | 55.0% | |
| GCGTGGGGTAAAGAGAAAGG+GGG | - | chr2.4:10271795-10271814 | None:intergenic | 55.0% | |
| GGAAGAGGCCCCATAAAGGA+GGG | + | chr2.4:10272241-10272260 | MS.gene31464:intron | 55.0% | |
| GGCCTCTTCCCAACAACACT+CGG | - | chr2.4:10272231-10272250 | None:intergenic | 55.0% | |
| GGCGTGGGGTAAAGAGAAAG+GGG | - | chr2.4:10271796-10271815 | None:intergenic | 55.0% | |
| GGGCGTGGGGTAAAGAGAAA+GGG | - | chr2.4:10271797-10271816 | None:intergenic | 55.0% | |
| GGTATCTTGCTGGGAAGGCA+GGG | + | chr2.4:10270655-10270674 | MS.gene31464:intron | 55.0% | |
| GTTGGGAAGAGGCCCCATAA+AGG | + | chr2.4:10272237-10272256 | MS.gene31464:intron | 55.0% | |
| TGGTATCTTGCTGGGAAGGC+AGG | + | chr2.4:10270654-10270673 | MS.gene31464:intron | 55.0% | |
| TGTGTTATGGGTATGGGCGC+AGG | + | chr2.4:10273623-10273642 | MS.gene31464:intron | 55.0% | |
| ACGCCCTCCAATGGTTGGAG+TGG | + | chr2.4:10271811-10271830 | MS.gene31464:intron | 60.0% | |
| ACTCCAACCATTGGAGGGCG+TGG | - | chr2.4:10271812-10271831 | None:intergenic | 60.0% | |
| CGAGGTCTAGCGCAAGTGGT+TGG | + | chr2.4:10271300-10271319 | MS.gene31464:intron | 60.0% | |
| CTTTACCCCACGCCCTCCAA+TGG | + | chr2.4:10271802-10271821 | MS.gene31464:intron | 60.0% | |
| GGGAAGAGGCCCCATAAAGG+AGG | + | chr2.4:10272240-10272259 | MS.gene31464:intron | 60.0% | |
| GGGCTGAATCATCACCGCAG+CGG | + | chr2.4:10272424-10272443 | MS.gene31464:intron | 60.0% | |
| TGACCGAGGTCTAGCGCAAG+TGG | + | chr2.4:10271296-10271315 | MS.gene31464:intron | 60.0% | |
| TGGGCATGGCAAGAAGGGGT+AGG | + | chr2.4:10271649-10271668 | MS.gene31464:CDS | 60.0% | |
| ! | AGTGGTTGGTGCGCAGTGTG+TGG | + | chr2.4:10271314-10271333 | MS.gene31464:intron | 60.0% |
| ! | CTCCAACCATTGGAGGGCGT+GGG | - | chr2.4:10271811-10271830 | None:intergenic | 60.0% |
| ! | TCCAACCATTGGAGGGCGTG+GGG | - | chr2.4:10271810-10271829 | None:intergenic | 60.0% |
| ACCCCACGCCCTCCAATGGT+TGG | + | chr2.4:10271806-10271825 | MS.gene31464:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 10270072 | 10274225 | 10270072 | ID=MS.gene31464 |
| chr2.4 | mRNA | 10270072 | 10274225 | 10270072 | ID=MS.gene31464.t1;Parent=MS.gene31464 |
| chr2.4 | exon | 10270072 | 10270317 | 10270072 | ID=MS.gene31464.t1.exon1;Parent=MS.gene31464.t1 |
| chr2.4 | CDS | 10270072 | 10270317 | 10270072 | ID=cds.MS.gene31464.t1;Parent=MS.gene31464.t1 |
| chr2.4 | exon | 10271544 | 10271741 | 10271544 | ID=MS.gene31464.t1.exon2;Parent=MS.gene31464.t1 |
| chr2.4 | CDS | 10271544 | 10271741 | 10271544 | ID=cds.MS.gene31464.t1;Parent=MS.gene31464.t1 |
| chr2.4 | exon | 10272833 | 10272955 | 10272833 | ID=MS.gene31464.t1.exon3;Parent=MS.gene31464.t1 |
| chr2.4 | CDS | 10272833 | 10272955 | 10272833 | ID=cds.MS.gene31464.t1;Parent=MS.gene31464.t1 |
| chr2.4 | exon | 10273301 | 10273512 | 10273301 | ID=MS.gene31464.t1.exon4;Parent=MS.gene31464.t1 |
| chr2.4 | CDS | 10273301 | 10273512 | 10273301 | ID=cds.MS.gene31464.t1;Parent=MS.gene31464.t1 |
| chr2.4 | exon | 10273823 | 10274225 | 10273823 | ID=MS.gene31464.t1.exon5;Parent=MS.gene31464.t1 |
| chr2.4 | CDS | 10273823 | 10274225 | 10273823 | ID=cds.MS.gene31464.t1;Parent=MS.gene31464.t1 |
| Gene Sequence |
| Protein sequence |
