Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32028.t1 | XP_013457082.1 | 96.3 | 655 | 24 | 0 | 1 | 655 | 1 | 655 | 0.00E+00 | 1084.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32028.t1 | Q9C950 | 64.6 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 5.5e-193 | 675.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32028.t1 | A0A072UPW1 | 96.3 | 655 | 24 | 0 | 1 | 655 | 1 | 655 | 0.0e+00 | 1084.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene32028 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene32028 | 0.803811 | 2.92E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene32028 | 0.823675 | 1.22E-53 | -1.69E-46 |
| MS.gene050257 | MS.gene32028 | 0.816857 | 4.45E-52 | -1.69E-46 |
| MS.gene050258 | MS.gene32028 | 0.820707 | 5.95E-53 | -1.69E-46 |
| MS.gene050348 | MS.gene32028 | 0.860257 | 2.34E-63 | -1.69E-46 |
| MS.gene050551 | MS.gene32028 | 0.874466 | 6.61E-68 | -1.69E-46 |
| MS.gene050646 | MS.gene32028 | 0.80405 | 2.60E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene32028 | 0.818268 | 2.14E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene32028 | 0.801399 | 9.17E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene32028 | 0.812779 | 3.57E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene32028 | 0.832413 | 9.59E-56 | -1.69E-46 |
| MS.gene051382 | MS.gene32028 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene051760 | MS.gene32028 | 0.824765 | 6.76E-54 | -1.69E-46 |
| MS.gene052155 | MS.gene32028 | -0.813598 | 2.36E-51 | -1.69E-46 |
| MS.gene052307 | MS.gene32028 | 0.821094 | 4.85E-53 | -1.69E-46 |
| MS.gene052335 | MS.gene32028 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene052397 | MS.gene32028 | 0.801267 | 9.76E-49 | -1.69E-46 |
| MS.gene052514 | MS.gene32028 | 0.99829 | 6.08E-261 | -1.69E-46 |
| MS.gene052516 | MS.gene32028 | 0.870714 | 1.18E-66 | -1.69E-46 |
| MS.gene052609 | MS.gene32028 | 0.853222 | 2.76E-61 | -1.69E-46 |
| MS.gene053079 | MS.gene32028 | 0.805296 | 1.43E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene32028 | 0.848706 | 5.16E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene32028 | 0.806041 | 9.97E-50 | -1.69E-46 |
| MS.gene05315 | MS.gene32028 | 0.821588 | 3.73E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene32028 | 0.808479 | 3.03E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene32028 | 0.814537 | 1.46E-51 | -1.69E-46 |
| MS.gene054824 | MS.gene32028 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene32028 | 0.815329 | 9.77E-52 | -1.69E-46 |
| MS.gene055467 | MS.gene32028 | 0.825862 | 3.72E-54 | -1.69E-46 |
| MS.gene055469 | MS.gene32028 | 0.834242 | 3.36E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene32028 | 0.832513 | 9.06E-56 | -1.69E-46 |
| MS.gene056507 | MS.gene32028 | 0.862257 | 5.76E-64 | -1.69E-46 |
| MS.gene056519 | MS.gene32028 | 0.833002 | 6.85E-56 | -1.69E-46 |
| MS.gene05686 | MS.gene32028 | 0.809147 | 2.18E-50 | -1.69E-46 |
| MS.gene057082 | MS.gene32028 | 0.802339 | 5.88E-49 | -1.69E-46 |
| MS.gene058010 | MS.gene32028 | 0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene058649 | MS.gene32028 | 0.839099 | 1.94E-57 | -1.69E-46 |
| MS.gene058668 | MS.gene32028 | 0.808105 | 3.65E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene32028 | 0.832703 | 8.12E-56 | -1.69E-46 |
| MS.gene061100 | MS.gene32028 | 0.809498 | 1.84E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene32028 | MS.gene64820 | PPI |
| MS.gene32028 | MS.gene67685 | PPI |
| MS.gene063673 | MS.gene32028 | PPI |
| MS.gene67503 | MS.gene32028 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32028.t1 | MTR_4g089070 | 99.237 | 655 | 5 | 0 | 1 | 655 | 1 | 655 | 0.0 | 1314 |
| MS.gene32028.t1 | MTR_7g099060 | 69.681 | 564 | 158 | 5 | 94 | 655 | 72 | 624 | 0.0 | 726 |
| MS.gene32028.t1 | MTR_4g032885 | 49.852 | 676 | 289 | 15 | 1 | 655 | 1 | 647 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32028.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
| MS.gene32028.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
| MS.gene32028.t1 | AT1G61040 | 64.643 | 659 | 213 | 10 | 1 | 655 | 1 | 643 | 0.0 | 721 |
Find 178 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAGGGGCTATCCTTTC+AGG | 0.171046 | 4.3:-23652287 | MS.gene32028:CDS |
| GAAACTTGCGAAATGGTTTA+TGG | 0.192619 | 4.3:-23652236 | MS.gene32028:CDS |
| TTCATTTAATGCTTCATTCT+TGG | 0.222704 | 4.3:+23652543 | None:intergenic |
| CTTGTCCACCTTCTTGAAAA+TGG | 0.242437 | 4.3:+23651554 | None:intergenic |
| AGGAGCTCAGGCAGGATTTA+TGG | 0.245228 | 4.3:-23651252 | MS.gene32028:CDS |
| GTCCAACACATCCTGCTTGC+TGG | 0.246370 | 4.3:+23651925 | None:intergenic |
| CTCAATCTACGGCGAGCTTC+TGG | 0.252204 | 4.3:+23652490 | None:intergenic |
| CTAGACCACTATGGCAGATT+TGG | 0.280131 | 4.3:-23653091 | None:intergenic |
| ACAAGTATTTGAATGTTGTT+TGG | 0.305232 | 4.3:-23652063 | MS.gene32028:CDS |
| CGGATGGTGGGAGTGATTCT+AGG | 0.310126 | 4.3:-23652972 | MS.gene32028:CDS |
| TTAGCATTACTTCATAAGTA+TGG | 0.312059 | 4.3:-23651284 | MS.gene32028:CDS |
| GTCCTTCACCTTTGCATGTC+TGG | 0.313091 | 4.3:+23651691 | None:intergenic |
| CAAGTATTTGAATGTTGTTT+GGG | 0.325352 | 4.3:-23652062 | MS.gene32028:CDS |
| TTACGGGACCCTGAGCTTCT+AGG | 0.331353 | 4.3:+23652460 | None:intergenic |
| AAAGGACGATAAAAGTTTAC+TGG | 0.334647 | 4.3:-23652677 | MS.gene32028:CDS |
| TTCAGCCAGCTTCAGAGCTT+TGG | 0.335439 | 4.3:+23651667 | None:intergenic |
| GGAATATAAGCAGTGGGTTA+AGG | 0.335444 | 4.3:-23651975 | MS.gene32028:CDS |
| GGCCGACAGAGATGATGATT+TGG | 0.344579 | 4.3:-23652866 | MS.gene32028:CDS |
| TGAAGTAATGCTAATGAAAC+TGG | 0.345518 | 4.3:+23651293 | None:intergenic |
| GATGATGATAGGGCATTATC+TGG | 0.351955 | 4.3:-23652310 | MS.gene32028:CDS |
| GGATCGATTAAGGAGCGATT+TGG | 0.360135 | 4.3:-23651786 | MS.gene32028:CDS |
| GCAGGAAGAACTGGTGCAGC+TGG | 0.367596 | 4.3:-23653048 | MS.gene32028:CDS |
| GCTATCCTTTCAGGATATAA+AGG | 0.369861 | 4.3:-23652278 | MS.gene32028:CDS |
| TAAATCCTGCCTGAGCTCCT+TGG | 0.376568 | 4.3:+23651255 | None:intergenic |
| TTGGAAGCTGCTGCTGATGC+TGG | 0.377240 | 4.3:-23651386 | MS.gene32028:CDS |
| GCGCCAGACTCTGCAGTTAC+TGG | 0.378663 | 4.3:+23651428 | None:intergenic |
| AGTGATGATGAAGGGTCAAC+TGG | 0.380812 | 4.3:-23652355 | MS.gene32028:CDS |
| AAATCCTGCCTGAGCTCCTT+GGG | 0.381424 | 4.3:+23651256 | None:intergenic |
| TCTAGTTTATACTGTCGATC+AGG | 0.382459 | 4.3:+23652100 | None:intergenic |
| AGATTTGGAAAATTTGCTTT+TGG | 0.383099 | 4.3:-23653076 | MS.gene32028:CDS |
| TCCAACACATCCTGCTTGCT+GGG | 0.387672 | 4.3:+23651926 | None:intergenic |
| GGCAAGACTGCTAGAATTAG+AGG | 0.388259 | 4.3:-23651717 | MS.gene32028:CDS |
| GATGCAGGCGCCAACGGAAC+TGG | 0.389784 | 4.3:-23651455 | MS.gene32028:CDS |
| CTGCTGAGAAGGATCGATTA+AGG | 0.390215 | 4.3:-23651796 | MS.gene32028:CDS |
| AGAGAGGCTCCTAGAAGCTC+AGG | 0.394299 | 4.3:-23652469 | MS.gene32028:CDS |
| ACCTACTTTCACTATCACTA+TGG | 0.400930 | 4.3:+23652383 | None:intergenic |
| TTGGAGGCTGCAGGAAGAAC+TGG | 0.405599 | 4.3:-23653057 | MS.gene32028:CDS |
| CTGGTGCAGCTGGGAGAAAT+CGG | 0.410742 | 4.3:-23653038 | MS.gene32028:CDS |
| GGCTGACCTATCGGCAGATC+TGG | 0.420016 | 4.3:+23652564 | None:intergenic |
| AGATGATGATTTGGGTAGTC+AGG | 0.424756 | 4.3:-23652857 | MS.gene32028:CDS |
| CATCCTGCTTGCTGGGCATC+CGG | 0.425090 | 4.3:+23651933 | None:intergenic |
| GTTGGTTGCTTTGTAAGAGT+TGG | 0.430881 | 4.3:-23652190 | MS.gene32028:CDS |
| GCTTTGGTGGGGAAAAGTTA+CGG | 0.432496 | 4.3:+23652443 | None:intergenic |
| TTCTTCGAGGAGTTGATAGT+TGG | 0.436708 | 4.3:-23652208 | MS.gene32028:CDS |
| CTTTGGTGGGGAAAAGTTAC+GGG | 0.440397 | 4.3:+23652444 | None:intergenic |
| TGGTGGAGCCCAAGGAGCTC+AGG | 0.441296 | 4.3:-23651264 | MS.gene32028:CDS |
| TGATTCTAGGGACGATGATT+CGG | 0.441920 | 4.3:-23652959 | MS.gene32028:CDS |
| CTCTGCTGCGAGGTGGCAAA+TGG | 0.444979 | 4.3:-23652029 | MS.gene32028:CDS |
| TTGCTGACAGTGATGATGAT+AGG | 0.449554 | 4.3:-23652321 | MS.gene32028:CDS |
| CAAGAAGGTGGACAAGATCA+AGG | 0.452160 | 4.3:-23651547 | MS.gene32028:CDS |
| ACCAGTGATGAATCAAATAT+CGG | 0.459937 | 4.3:-23652793 | MS.gene32028:CDS |
| GTACCAGTAACTGCAGAGTC+TGG | 0.460446 | 4.3:-23651431 | MS.gene32028:CDS |
| GCCGACAGAGATGATGATTT+GGG | 0.461153 | 4.3:-23652865 | MS.gene32028:CDS |
| ACGACATGATGGCTCCTATT+CGG | 0.462155 | 4.3:-23652992 | MS.gene32028:CDS |
| GATGAAGGGTCAACTGGGGA+TGG | 0.465099 | 4.3:-23652349 | MS.gene32028:CDS |
| GGAATCGGTAGATCTAAAAC+TGG | 0.468450 | 4.3:-23652169 | MS.gene32028:CDS |
| GTTGGCTTAGTTTCTGATGC+AGG | 0.468889 | 4.3:-23651470 | MS.gene32028:CDS |
| GCAGGTCGAAACTTGCGAAA+TGG | 0.472493 | 4.3:-23652243 | MS.gene32028:CDS |
| TTCATTCTTGGCTGACCTAT+CGG | 0.475537 | 4.3:+23652555 | None:intergenic |
| GATGTGAAAGACTTGCGCTT+TGG | 0.476371 | 4.3:+23652427 | None:intergenic |
| GCTTTAAATAATAATACAGT+TGG | 0.476435 | 4.3:-23651488 | MS.gene32028:CDS |
| CCATTAACCGGTTTAAAAGA+AGG | 0.478030 | 4.3:-23651593 | MS.gene32028:CDS |
| TCTGAATTGAGGCCATTAAC+CGG | 0.478837 | 4.3:-23651605 | MS.gene32028:CDS |
| TTCTCAGCAGCAATATTTAG+CGG | 0.479881 | 4.3:+23651809 | None:intergenic |
| ATCACTCCCACCATCCGAAT+AGG | 0.488688 | 4.3:+23652978 | None:intergenic |
| ACGAGTGCTCCGGTGGATCA+AGG | 0.488751 | 4.3:-23651350 | MS.gene32028:CDS |
| TCTAAAGAAAAGATTAGATC+CGG | 0.489106 | 4.3:-23652887 | MS.gene32028:CDS |
| GGTTTAAAAGAAGGGGATGC+AGG | 0.489652 | 4.3:-23651584 | MS.gene32028:CDS |
| GGTGGCTACTGCCATTGCCT+TGG | 0.489865 | 4.3:-23651405 | MS.gene32028:CDS |
| TATGCAAGCAGAAAGCCATC+TGG | 0.492063 | 4.3:-23652922 | MS.gene32028:CDS |
| TGCTGCTGATGCTGGAAAGT+TGG | 0.493452 | 4.3:-23651378 | MS.gene32028:CDS |
| GGCACTCTCTCCCACCTTCG+AGG | 0.493621 | 4.3:-23653017 | MS.gene32028:CDS |
| TAAGCAGTGGGTTAAGGAAG+TGG | 0.495237 | 4.3:-23651969 | MS.gene32028:CDS |
| CAGGAAGAAGCAGATGATGA+TGG | 0.500980 | 4.3:-23652838 | MS.gene32028:CDS |
| ATTGCATCAAAGCGTGAGAA+AGG | 0.501489 | 4.3:-23652649 | MS.gene32028:CDS |
| GTTTATGGAGCCTTTCTTCG+AGG | 0.503115 | 4.3:-23652221 | MS.gene32028:CDS |
| TGGCCGGATGCCCAGCAAGC+AGG | 0.503690 | 4.3:-23651936 | MS.gene32028:CDS |
| GCCCAGCAAGCAGGATGTGT+TGG | 0.504729 | 4.3:-23651927 | MS.gene32028:CDS |
| AGGGCATTATCTGGATCTGA+GGG | 0.508292 | 4.3:-23652301 | MS.gene32028:CDS |
| CATTAACCGGTTTAAAAGAA+GGG | 0.511793 | 4.3:-23651592 | MS.gene32028:CDS |
| AAGTGGAACGGAGTGGTGGC+CGG | 0.511876 | 4.3:-23651952 | MS.gene32028:CDS |
| GCTAAATATTGCTGCTGAGA+AGG | 0.511981 | 4.3:-23651807 | MS.gene32028:CDS |
| ACTATCAACTCCTCGAAGAA+AGG | 0.513788 | 4.3:+23652211 | None:intergenic |
| AAAGGAAAGGCAATAATGAC+TGG | 0.514262 | 4.3:-23652631 | MS.gene32028:CDS |
| GCCGATATTTGATTCATCAC+TGG | 0.517944 | 4.3:+23652792 | None:intergenic |
| TGTTGCAACACCTAGTGAAA+AGG | 0.522228 | 4.3:-23651516 | MS.gene32028:CDS |
| TTTAAACTCTCGGAAAATGA+TGG | 0.524376 | 4.3:-23651197 | MS.gene32028:CDS |
| TAAGAACGATGATGTGGAAG+TGG | 0.526485 | 4.3:-23651750 | MS.gene32028:CDS |
| TGCTTATATTCCTCTTCAAG+TGG | 0.530910 | 4.3:+23651986 | None:intergenic |
| CGACTCTCCTCCACTTGAAG+AGG | 0.532180 | 4.3:-23651996 | MS.gene32028:CDS |
| GGACGCCAAAGCTCTGAAGC+TGG | 0.533086 | 4.3:-23651672 | MS.gene32028:CDS |
| AACAGTTGGATTTAAACTCT+CGG | 0.535156 | 4.3:-23651207 | MS.gene32028:CDS |
| ACCATGCAGAGCCGATAGAT+AGG | 0.535837 | 4.3:+23652145 | None:intergenic |
| TACTGGTACTCCAGTTCCGT+TGG | 0.535943 | 4.3:+23651445 | None:intergenic |
| TCATGTCGTCTCCTCGAAGG+TGG | 0.537598 | 4.3:+23653006 | None:intergenic |
| AACTCTCGGAAAATGATGGC+AGG | 0.539618 | 4.3:-23651193 | MS.gene32028:CDS |
| GGAGCCCAAGGAGCTCAGGC+AGG | 0.540666 | 4.3:-23651260 | MS.gene32028:CDS |
| GTGAAAGACTTGCGCTTTGG+TGG | 0.540925 | 4.3:+23652430 | None:intergenic |
| TGCTTTGTAAGAGTTGGAAT+CGG | 0.542888 | 4.3:-23652184 | MS.gene32028:CDS |
| GTTTCTGATGCAGGCGCCAA+CGG | 0.547991 | 4.3:-23651461 | MS.gene32028:CDS |
| GAAGGGTCAACTGGGGATGG+AGG | 0.548587 | 4.3:-23652346 | MS.gene32028:CDS |
| TATTTCCTTTATATCCTGAA+AGG | 0.548926 | 4.3:+23652273 | None:intergenic |
| CTAGTTTATACTGTCGATCA+GGG | 0.549414 | 4.3:+23652101 | None:intergenic |
| AGCAGCAACAAATTCAAAGA+AGG | 0.550571 | 4.3:+23651123 | None:intergenic |
| AAATCATCATCTCTGTCGGC+CGG | 0.550882 | 4.3:+23652868 | None:intergenic |
| TTGAAGAGGAATATAAGCAG+TGG | 0.551720 | 4.3:-23651982 | MS.gene32028:CDS |
| TAGGAGCCTCTCTCAATCTA+CGG | 0.552930 | 4.3:+23652479 | None:intergenic |
| AGGAAGAAGCAGATGATGAT+GGG | 0.553651 | 4.3:-23652837 | MS.gene32028:CDS |
| CAGGAAGAACTGGTGCAGCT+GGG | 0.554030 | 4.3:-23653047 | MS.gene32028:CDS |
| GATTCCGTCCCTTGATCCAC+CGG | 0.555339 | 4.3:+23651341 | None:intergenic |
| TAAAGGAAATAACTATTCGC+AGG | 0.556325 | 4.3:-23652261 | MS.gene32028:CDS |
| AGAGGAACTTGTGATCCAGA+TGG | 0.558880 | 4.3:+23652907 | None:intergenic |
| AGGTCTCACAGTGATGATGA+AGG | 0.560003 | 4.3:-23652364 | MS.gene32028:CDS |
| GTGATGATGAAGGGTCAACT+GGG | 0.560268 | 4.3:-23652354 | MS.gene32028:CDS |
| AGCATCAGCAGCAGCTTCCA+AGG | 0.560846 | 4.3:+23651388 | None:intergenic |
| CGAGTGCTCCGGTGGATCAA+GGG | 0.561052 | 4.3:-23651349 | MS.gene32028:CDS |
| CATAAGTATGGTGGAGCCCA+AGG | 0.561256 | 4.3:-23651272 | MS.gene32028:CDS |
| GGTGATTACAAAAGAAGAAG+AGG | 0.564617 | 4.3:-23651146 | MS.gene32028:CDS |
| TGAAAGACTTGCGCTTTGGT+GGG | 0.565341 | 4.3:+23652431 | None:intergenic |
| AGCAGCAGCTTCCAAGGCAA+TGG | 0.566339 | 4.3:+23651394 | None:intergenic |
| GGATGGTGGGAGTGATTCTA+GGG | 0.568352 | 4.3:-23652971 | MS.gene32028:CDS |
| ACCTATCTATCGGCTCTGCA+TGG | 0.568699 | 4.3:-23652146 | MS.gene32028:CDS |
| GTTGGTGGATACGAGTGCTC+CGG | 0.569612 | 4.3:-23651360 | MS.gene32028:CDS |
| TGCTGACAGTGATGATGATA+GGG | 0.571331 | 4.3:-23652320 | MS.gene32028:CDS |
| CTAAAACTGGACCTATCTAT+CGG | 0.572540 | 4.3:-23652156 | MS.gene32028:CDS |
| CAAAGAATAGAATCAACAGT+TGG | 0.573933 | 4.3:-23651221 | MS.gene32028:CDS |
| TGCTGATGCTGGAAAGTTGG+TGG | 0.573970 | 4.3:-23651375 | MS.gene32028:CDS |
| ATGGCTCCTATTCGGATGGT+GGG | 0.577523 | 4.3:-23652984 | MS.gene32028:CDS |
| TGTGGAAGTGGAGAGGATCA+AGG | 0.577964 | 4.3:-23651738 | MS.gene32028:CDS |
| TCTACAAAGACGAAGATGAC+AGG | 0.581505 | 4.3:-23652762 | MS.gene32028:CDS |
| TAGGGCATTATCTGGATCTG+AGG | 0.584974 | 4.3:-23652302 | MS.gene32028:CDS |
| GCATTACTTCATAAGTATGG+TGG | 0.585022 | 4.3:-23651281 | MS.gene32028:CDS |
| AAGGACGATAAAAGTTTACT+GGG | 0.586185 | 4.3:-23652676 | MS.gene32028:CDS |
| GGTGGATACGAGTGCTCCGG+TGG | 0.588884 | 4.3:-23651357 | MS.gene32028:CDS |
| GATGGCTCCTATTCGGATGG+TGG | 0.594177 | 4.3:-23652985 | MS.gene32028:CDS |
| ATCCAGACATGCAAAGGTGA+AGG | 0.594199 | 4.3:-23651693 | MS.gene32028:CDS |
| CCATCATGTCGTCTCCTCGA+AGG | 0.596373 | 4.3:+23653003 | None:intergenic |
| ACCCAAATCATCATCTCTGT+CGG | 0.596745 | 4.3:+23652864 | None:intergenic |
| ATTAACCGGTTTAAAAGAAG+GGG | 0.598511 | 4.3:-23651591 | MS.gene32028:CDS |
| AATATTTAGCGGCCTTGACG+AGG | 0.600006 | 4.3:+23651820 | None:intergenic |
| AGAGGCATCCAGACATGCAA+AGG | 0.600916 | 4.3:-23651699 | MS.gene32028:CDS |
| GCATGCGAGATGATGAAAGT+GGG | 0.602189 | 4.3:+23652596 | None:intergenic |
| AAGTATTTGAATGTTGTTTG+GGG | 0.602265 | 4.3:-23652061 | MS.gene32028:CDS |
| GCCATAGTGATAGTGAAAGT+AGG | 0.603787 | 4.3:-23652384 | MS.gene32028:CDS |
| TTATATTCCTCTTCAAGTGG+AGG | 0.604750 | 4.3:+23651989 | None:intergenic |
| CATGATGGCTCCTATTCGGA+TGG | 0.607216 | 4.3:-23652988 | MS.gene32028:CDS |
| AACTGCAGAGTCTGGCGCGG+TGG | 0.610976 | 4.3:-23651423 | MS.gene32028:CDS |
| TAAATGAACTGCGTGCAAAG+AGG | 0.617319 | 4.3:-23652528 | MS.gene32028:CDS |
| CGCATGCGAGATGATGAAAG+TGG | 0.622352 | 4.3:+23652595 | None:intergenic |
| TGAAGAGGAATATAAGCAGT+GGG | 0.622796 | 4.3:-23651981 | MS.gene32028:CDS |
| TGCTCCGGTGGATCAAGGGA+CGG | 0.626963 | 4.3:-23651345 | MS.gene32028:CDS |
| GAAAGACTTGCGCTTTGGTG+GGG | 0.627091 | 4.3:+23652432 | None:intergenic |
| ATACTGTCGATCAGGGTCTG+AGG | 0.628006 | 4.3:+23652108 | None:intergenic |
| AGCTCGCCGTAGATTGAGAG+AGG | 0.631416 | 4.3:-23652485 | MS.gene32028:CDS |
| CATGTATTGACTCTGTCAGT+TGG | 0.631980 | 4.3:-23651167 | MS.gene32028:CDS |
| GGTCTCACAGTGATGATGAA+GGG | 0.632087 | 4.3:-23652363 | MS.gene32028:CDS |
| CATGTCGTCTCCTCGAAGGT+GGG | 0.633501 | 4.3:+23653007 | None:intergenic |
| ATGCGAGATGATGAAAGTGG+GGG | 0.633726 | 4.3:+23652598 | None:intergenic |
| TGCGAGATGATGAAAGTGGG+GGG | 0.635142 | 4.3:+23652599 | None:intergenic |
| ACGATGATGTGGAAGTGGAG+AGG | 0.638337 | 4.3:-23651745 | MS.gene32028:CDS |
| GTTAAGGAAGTGGAACGGAG+TGG | 0.638804 | 4.3:-23651959 | MS.gene32028:CDS |
| CCTTCGAGGAGACGACATGA+TGG | 0.639492 | 4.3:-23653003 | MS.gene32028:CDS |
| GAGAGGCTCCTAGAAGCTCA+GGG | 0.641941 | 4.3:-23652468 | MS.gene32028:CDS |
| AAGGAAGTGGAACGGAGTGG+TGG | 0.642363 | 4.3:-23651956 | MS.gene32028:CDS |
| GATGGGCGAAGCGATCGTGA+AGG | 0.642869 | 4.3:-23652820 | MS.gene32028:CDS |
| CATCTGCCAGATCTGCCGAT+AGG | 0.645205 | 4.3:-23652570 | MS.gene32028:CDS |
| CATGCGAGATGATGAAAGTG+GGG | 0.650744 | 4.3:+23652597 | None:intergenic |
| ATCAAAGCGTGAGAAAGGAA+AGG | 0.653833 | 4.3:-23652644 | MS.gene32028:CDS |
| ATGAAAGCTCTGCTGCGAGG+TGG | 0.660569 | 4.3:-23652036 | MS.gene32028:CDS |
| AGCGATTTGGAAAGAGCACA+AGG | 0.666283 | 4.3:-23651773 | MS.gene32028:CDS |
| ACAAGGTAAGAACGATGATG+TGG | 0.678810 | 4.3:-23651756 | MS.gene32028:CDS |
| GCGAGATGATGAAAGTGGGG+GGG | 0.695667 | 4.3:+23652600 | None:intergenic |
| AGTGGGTTAAGGAAGTGGAA+CGG | 0.697326 | 4.3:-23651964 | MS.gene32028:CDS |
| AGTAACTGCAGAGTCTGGCG+CGG | 0.702682 | 4.3:-23651426 | MS.gene32028:CDS |
| ACAAAGACGAAGATGACAGG+CGG | 0.721953 | 4.3:-23652759 | MS.gene32028:CDS |
| GAAATGAAAGCTCTGCTGCG+AGG | 0.724498 | 4.3:-23652039 | MS.gene32028:CDS |
| GGGCATTATCTGGATCTGAG+GGG | 0.759567 | 4.3:-23652300 | MS.gene32028:CDS |
| TGATGATGAAGGGTCAACTG+GGG | 0.771361 | 4.3:-23652353 | MS.gene32028:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCTTTAAATAATAATACAGT+TGG | - | chr4.3:23652729-23652748 | MS.gene32028:CDS | 20.0% |
| ! | ACAAGTATTTGAATGTTGTT+TGG | - | chr4.3:23652154-23652173 | MS.gene32028:CDS | 25.0% |
| ! | TATTTCCTTTATATCCTGAA+AGG | + | chr4.3:23651947-23651966 | None:intergenic | 25.0% |
| ! | TCTAAAGAAAAGATTAGATC+CGG | - | chr4.3:23651330-23651349 | MS.gene32028:CDS | 25.0% |
| ! | TGAAATGAACAGAAAAAACA+GGG | - | chr4.3:23652569-23652588 | MS.gene32028:CDS | 25.0% |
| ! | TTAGCATTACTTCATAAGTA+TGG | - | chr4.3:23652933-23652952 | MS.gene32028:CDS | 25.0% |
| ! | TTCATTTAATGCTTCATTCT+TGG | + | chr4.3:23651677-23651696 | None:intergenic | 25.0% |
| !! | AAGTATTTGAATGTTGTTTG+GGG | - | chr4.3:23652156-23652175 | MS.gene32028:CDS | 25.0% |
| !! | CAAGTATTTGAATGTTGTTT+GGG | - | chr4.3:23652155-23652174 | MS.gene32028:CDS | 25.0% |
| !!! | AGATTTGGAAAATTTGCTTT+TGG | - | chr4.3:23651141-23651160 | MS.gene32028:CDS | 25.0% |
| AAAGGACGATAAAAGTTTAC+TGG | - | chr4.3:23651540-23651559 | MS.gene32028:CDS | 30.0% | |
| AACAGTTGGATTTAAACTCT+CGG | - | chr4.3:23653010-23653029 | MS.gene32028:CDS | 30.0% | |
| AAGGACGATAAAAGTTTACT+GGG | - | chr4.3:23651541-23651560 | MS.gene32028:CDS | 30.0% | |
| ACCAGTGATGAATCAAATAT+CGG | - | chr4.3:23651424-23651443 | MS.gene32028:CDS | 30.0% | |
| CAAAGAATAGAATCAACAGT+TGG | - | chr4.3:23652996-23653015 | MS.gene32028:CDS | 30.0% | |
| CTGAAATGAACAGAAAAAAC+AGG | - | chr4.3:23652568-23652587 | MS.gene32028:CDS | 30.0% | |
| TAAAGGAAATAACTATTCGC+AGG | - | chr4.3:23651956-23651975 | MS.gene32028:CDS | 30.0% | |
| TCAAAAATGCTTCTGAATTG+AGG | - | chr4.3:23652601-23652620 | MS.gene32028:CDS | 30.0% | |
| TGAAGTAATGCTAATGAAAC+TGG | + | chr4.3:23652927-23652946 | None:intergenic | 30.0% | |
| TTTAAACTCTCGGAAAATGA+TGG | - | chr4.3:23653020-23653039 | MS.gene32028:CDS | 30.0% | |
| ! | ATTAACCGGTTTAAAAGAAG+GGG | - | chr4.3:23652626-23652645 | MS.gene32028:CDS | 30.0% |
| ! | CATTAACCGGTTTAAAAGAA+GGG | - | chr4.3:23652625-23652644 | MS.gene32028:CDS | 30.0% |
| ! | GGATCTAATCTTTTCTTTAG+AGG | + | chr4.3:23651331-23651350 | None:intergenic | 30.0% |
| ! | TCAAAGAGAGATGATTTTGT+CGG | - | chr4.3:23651504-23651523 | MS.gene32028:CDS | 30.0% |
| !! | GTTATGATCCATTTTCAAGA+AGG | - | chr4.3:23652655-23652674 | MS.gene32028:CDS | 30.0% |
| !! | TTTGGAAAATTTGCTTTTGG+AGG | - | chr4.3:23651144-23651163 | MS.gene32028:CDS | 30.0% |
| AAAGGAAAGGCAATAATGAC+TGG | - | chr4.3:23651586-23651605 | MS.gene32028:CDS | 35.0% | |
| ACCTACTTTCACTATCACTA+TGG | + | chr4.3:23651837-23651856 | None:intergenic | 35.0% | |
| CTAAAACTGGACCTATCTAT+CGG | - | chr4.3:23652061-23652080 | MS.gene32028:CDS | 35.0% | |
| CTAGTTTATACTGTCGATCA+GGG | + | chr4.3:23652119-23652138 | None:intergenic | 35.0% | |
| GAAACTTGCGAAATGGTTTA+TGG | - | chr4.3:23651981-23652000 | MS.gene32028:CDS | 35.0% | |
| GCATTACTTCATAAGTATGG+TGG | - | chr4.3:23652936-23652955 | MS.gene32028:CDS | 35.0% | |
| GCTATCCTTTCAGGATATAA+AGG | - | chr4.3:23651939-23651958 | MS.gene32028:CDS | 35.0% | |
| GGTGATTACAAAAGAAGAAG+AGG | - | chr4.3:23653071-23653090 | MS.gene32028:CDS | 35.0% | |
| TGAAGAGGAATATAAGCAGT+GGG | - | chr4.3:23652236-23652255 | MS.gene32028:CDS | 35.0% | |
| TGCTTATATTCCTCTTCAAG+TGG | + | chr4.3:23652234-23652253 | None:intergenic | 35.0% | |
| TGCTTTGTAAGAGTTGGAAT+CGG | - | chr4.3:23652033-23652052 | MS.gene32028:CDS | 35.0% | |
| TTATATTCCTCTTCAAGTGG+AGG | + | chr4.3:23652231-23652250 | None:intergenic | 35.0% | |
| TTCTCAGCAGCAATATTTAG+CGG | + | chr4.3:23652411-23652430 | None:intergenic | 35.0% | |
| TTGAAGAGGAATATAAGCAG+TGG | - | chr4.3:23652235-23652254 | MS.gene32028:CDS | 35.0% | |
| ! | AGAGATGATTTTGTCGGATA+GGG | - | chr4.3:23651510-23651529 | MS.gene32028:CDS | 35.0% |
| ! | CCATTAACCGGTTTAAAAGA+AGG | - | chr4.3:23652624-23652643 | MS.gene32028:CDS | 35.0% |
| ! | CCTTCTTTTAAACCGGTTAA+TGG | + | chr4.3:23652627-23652646 | None:intergenic | 35.0% |
| ! | TCTAGTTTATACTGTCGATC+AGG | + | chr4.3:23652120-23652139 | None:intergenic | 35.0% |
| !! | ATGATCCATTTTCAAGAAGG+TGG | - | chr4.3:23652658-23652677 | MS.gene32028:CDS | 35.0% |
| ACAAGGTAAGAACGATGATG+TGG | - | chr4.3:23652461-23652480 | MS.gene32028:CDS | 40.0% | |
| ACCCAAATCATCATCTCTGT+CGG | + | chr4.3:23651356-23651375 | None:intergenic | 40.0% | |
| ACTATCAACTCCTCGAAGAA+AGG | + | chr4.3:23652009-23652028 | None:intergenic | 40.0% | |
| AGGAAGAAGCAGATGATGAT+GGG | - | chr4.3:23651380-23651399 | MS.gene32028:CDS | 40.0% | |
| ATCAAAGCGTGAGAAAGGAA+AGG | - | chr4.3:23651573-23651592 | MS.gene32028:CDS | 40.0% | |
| ATTGCATCAAAGCGTGAGAA+AGG | - | chr4.3:23651568-23651587 | MS.gene32028:CDS | 40.0% | |
| CTTGTCCACCTTCTTGAAAA+TGG | + | chr4.3:23652666-23652685 | None:intergenic | 40.0% | |
| GCCGATATTTGATTCATCAC+TGG | + | chr4.3:23651428-23651447 | None:intergenic | 40.0% | |
| GCTAAATATTGCTGCTGAGA+AGG | - | chr4.3:23652410-23652429 | MS.gene32028:CDS | 40.0% | |
| TAAATGAACTGCGTGCAAAG+AGG | - | chr4.3:23651689-23651708 | MS.gene32028:CDS | 40.0% | |
| TAAGAACGATGATGTGGAAG+TGG | - | chr4.3:23652467-23652486 | MS.gene32028:CDS | 40.0% | |
| TCTACAAAGACGAAGATGAC+AGG | - | chr4.3:23651455-23651474 | MS.gene32028:CDS | 40.0% | |
| TCTGAATTGAGGCCATTAAC+CGG | - | chr4.3:23652612-23652631 | MS.gene32028:CDS | 40.0% | |
| TGTTGCAACACCTAGTGAAA+AGG | - | chr4.3:23652701-23652720 | MS.gene32028:CDS | 40.0% | |
| TTCATTCTTGGCTGACCTAT+CGG | + | chr4.3:23651665-23651684 | None:intergenic | 40.0% | |
| ! | AGATGATGATTTGGGTAGTC+AGG | - | chr4.3:23651360-23651379 | MS.gene32028:CDS | 40.0% |
| ! | GAGAGATGATTTTGTCGGAT+AGG | - | chr4.3:23651509-23651528 | MS.gene32028:CDS | 40.0% |
| ! | GATGATGATAGGGCATTATC+TGG | - | chr4.3:23651907-23651926 | MS.gene32028:CDS | 40.0% |
| ! | GCCATAGTGATAGTGAAAGT+AGG | - | chr4.3:23651833-23651852 | MS.gene32028:CDS | 40.0% |
| ! | GGAATCGGTAGATCTAAAAC+TGG | - | chr4.3:23652048-23652067 | MS.gene32028:CDS | 40.0% |
| ! | GTTGGTTGCTTTGTAAGAGT+TGG | - | chr4.3:23652027-23652046 | MS.gene32028:CDS | 40.0% |
| ! | TGATTCTAGGGACGATGATT+CGG | - | chr4.3:23651258-23651277 | MS.gene32028:CDS | 40.0% |
| ! | TGCATCCCCTTCTTTTAAAC+CGG | + | chr4.3:23652634-23652653 | None:intergenic | 40.0% |
| ! | TGCTGACAGTGATGATGATA+GGG | - | chr4.3:23651897-23651916 | MS.gene32028:CDS | 40.0% |
| ! | TTGCTGACAGTGATGATGAT+AGG | - | chr4.3:23651896-23651915 | MS.gene32028:CDS | 40.0% |
| !! | CATGTATTGACTCTGTCAGT+TGG | - | chr4.3:23653050-23653069 | MS.gene32028:CDS | 40.0% |
| !! | GGAATATAAGCAGTGGGTTA+AGG | - | chr4.3:23652242-23652261 | MS.gene32028:CDS | 40.0% |
| !! | TTCTTCGAGGAGTTGATAGT+TGG | - | chr4.3:23652009-23652028 | MS.gene32028:CDS | 40.0% |
| AAATCATCATCTCTGTCGGC+CGG | + | chr4.3:23651352-23651371 | None:intergenic | 45.0% | |
| AACTCTCGGAAAATGATGGC+AGG | - | chr4.3:23653024-23653043 | MS.gene32028:CDS | 45.0% | |
| AATATTTAGCGGCCTTGACG+AGG | + | chr4.3:23652400-23652419 | None:intergenic | 45.0% | |
| ACAAAGACGAAGATGACAGG+CGG | - | chr4.3:23651458-23651477 | MS.gene32028:CDS | 45.0% | |
| ACGACATGATGGCTCCTATT+CGG | - | chr4.3:23651225-23651244 | MS.gene32028:CDS | 45.0% | |
| AGAAAAAGTCTGCCTCGTCA+AGG | - | chr4.3:23652385-23652404 | MS.gene32028:CDS | 45.0% | |
| AGAGGAACTTGTGATCCAGA+TGG | + | chr4.3:23651313-23651332 | None:intergenic | 45.0% | |
| ATCCAGACATGCAAAGGTGA+AGG | - | chr4.3:23652524-23652543 | MS.gene32028:CDS | 45.0% | |
| ATGCGAGATGATGAAAGTGG+GGG | + | chr4.3:23651622-23651641 | None:intergenic | 45.0% | |
| CAAGAAGGTGGACAAGATCA+AGG | - | chr4.3:23652670-23652689 | MS.gene32028:CDS | 45.0% | |
| CAGGAAGAAGCAGATGATGA+TGG | - | chr4.3:23651379-23651398 | MS.gene32028:CDS | 45.0% | |
| CATGCGAGATGATGAAAGTG+GGG | + | chr4.3:23651623-23651642 | None:intergenic | 45.0% | |
| CTGCTGAGAAGGATCGATTA+AGG | - | chr4.3:23652421-23652440 | MS.gene32028:CDS | 45.0% | |
| CTTTGGTGGGGAAAAGTTAC+GGG | + | chr4.3:23651776-23651795 | None:intergenic | 45.0% | |
| GATGTGAAAGACTTGCGCTT+TGG | + | chr4.3:23651793-23651812 | None:intergenic | 45.0% | |
| GCATGCGAGATGATGAAAGT+GGG | + | chr4.3:23651624-23651643 | None:intergenic | 45.0% | |
| GCCGACAGAGATGATGATTT+GGG | - | chr4.3:23651352-23651371 | MS.gene32028:CDS | 45.0% | |
| GCTTTGGTGGGGAAAAGTTA+CGG | + | chr4.3:23651777-23651796 | None:intergenic | 45.0% | |
| GGATCGATTAAGGAGCGATT+TGG | - | chr4.3:23652431-23652450 | MS.gene32028:CDS | 45.0% | |
| GGCAAGACTGCTAGAATTAG+AGG | - | chr4.3:23652500-23652519 | MS.gene32028:CDS | 45.0% | |
| GGTTTAAAAGAAGGGGATGC+AGG | - | chr4.3:23652633-23652652 | MS.gene32028:CDS | 45.0% | |
| GTCGGATAGGGCTTCAAAAA+AGG | - | chr4.3:23651522-23651541 | MS.gene32028:CDS | 45.0% | |
| GTTTATGGAGCCTTTCTTCG+AGG | - | chr4.3:23651996-23652015 | MS.gene32028:CDS | 45.0% | |
| TAGGAGCCTCTCTCAATCTA+CGG | + | chr4.3:23651741-23651760 | None:intergenic | 45.0% | |
| TATGCAAGCAGAAAGCCATC+TGG | - | chr4.3:23651295-23651314 | MS.gene32028:CDS | 45.0% | |
| TGAAAGACTTGCGCTTTGGT+GGG | + | chr4.3:23651789-23651808 | None:intergenic | 45.0% | |
| ! | AAAGCAGCAGCCTTTTCACT+AGG | + | chr4.3:23652714-23652733 | None:intergenic | 45.0% |
| ! | AGCGATTTGGAAAGAGCACA+AGG | - | chr4.3:23652444-23652463 | MS.gene32028:CDS | 45.0% |
| ! | AGGGCATTATCTGGATCTGA+GGG | - | chr4.3:23651916-23651935 | MS.gene32028:CDS | 45.0% |
| ! | AGGTCTCACAGTGATGATGA+AGG | - | chr4.3:23651853-23651872 | MS.gene32028:CDS | 45.0% |
| ! | AGTGATGATGAAGGGTCAAC+TGG | - | chr4.3:23651862-23651881 | MS.gene32028:CDS | 45.0% |
| ! | GGTCTCACAGTGATGATGAA+GGG | - | chr4.3:23651854-23651873 | MS.gene32028:CDS | 45.0% |
| ! | GTGATGATGAAGGGTCAACT+GGG | - | chr4.3:23651863-23651882 | MS.gene32028:CDS | 45.0% |
| ! | GTTGGCTTAGTTTCTGATGC+AGG | - | chr4.3:23652747-23652766 | MS.gene32028:CDS | 45.0% |
| ! | TAGGGCATTATCTGGATCTG+AGG | - | chr4.3:23651915-23651934 | MS.gene32028:CDS | 45.0% |
| ! | TGATGATGAAGGGTCAACTG+GGG | - | chr4.3:23651864-23651883 | MS.gene32028:CDS | 45.0% |
| !! | AATTTGCTTTTGGAGGCTGC+AGG | - | chr4.3:23651151-23651170 | MS.gene32028:CDS | 45.0% |
| !! | AGTGGGTTAAGGAAGTGGAA+CGG | - | chr4.3:23652253-23652272 | MS.gene32028:CDS | 45.0% |
| !! | TAAGCAGTGGGTTAAGGAAG+TGG | - | chr4.3:23652248-23652267 | MS.gene32028:CDS | 45.0% |
| AAATCCTGCCTGAGCTCCTT+GGG | + | chr4.3:23652964-23652983 | None:intergenic | 50.0% | |
| ACCATGCAGAGCCGATAGAT+AGG | + | chr4.3:23652075-23652094 | None:intergenic | 50.0% | |
| ACGATGATGTGGAAGTGGAG+AGG | - | chr4.3:23652472-23652491 | MS.gene32028:CDS | 50.0% | |
| AGGAGCTCAGGCAGGATTTA+TGG | - | chr4.3:23652965-23652984 | MS.gene32028:CDS | 50.0% | |
| ATACTGTCGATCAGGGTCTG+AGG | + | chr4.3:23652112-23652131 | None:intergenic | 50.0% | |
| ATCACTCCCACCATCCGAAT+AGG | + | chr4.3:23651242-23651261 | None:intergenic | 50.0% | |
| ATCTGAGGGGCTATCCTTTC+AGG | - | chr4.3:23651930-23651949 | MS.gene32028:CDS | 50.0% | |
| ATGGCTCCTATTCGGATGGT+GGG | - | chr4.3:23651233-23651252 | MS.gene32028:CDS | 50.0% | |
| CATGATGGCTCCTATTCGGA+TGG | - | chr4.3:23651229-23651248 | MS.gene32028:CDS | 50.0% | |
| CGCATGCGAGATGATGAAAG+TGG | + | chr4.3:23651625-23651644 | None:intergenic | 50.0% | |
| GAAAGACTTGCGCTTTGGTG+GGG | + | chr4.3:23651788-23651807 | None:intergenic | 50.0% | |
| GAAATGAAAGCTCTGCTGCG+AGG | - | chr4.3:23652178-23652197 | MS.gene32028:CDS | 50.0% | |
| GCAGGTCGAAACTTGCGAAA+TGG | - | chr4.3:23651974-23651993 | MS.gene32028:CDS | 50.0% | |
| GGCCGACAGAGATGATGATT+TGG | - | chr4.3:23651351-23651370 | MS.gene32028:CDS | 50.0% | |
| GGGCATTATCTGGATCTGAG+GGG | - | chr4.3:23651917-23651936 | MS.gene32028:CDS | 50.0% | |
| GTACCAGTAACTGCAGAGTC+TGG | - | chr4.3:23652786-23652805 | MS.gene32028:CDS | 50.0% | |
| GTCCTTCACCTTTGCATGTC+TGG | + | chr4.3:23652529-23652548 | None:intergenic | 50.0% | |
| GTGAAAGACTTGCGCTTTGG+TGG | + | chr4.3:23651790-23651809 | None:intergenic | 50.0% | |
| GTTAAGGAAGTGGAACGGAG+TGG | - | chr4.3:23652258-23652277 | MS.gene32028:CDS | 50.0% | |
| TAAATCCTGCCTGAGCTCCT+TGG | + | chr4.3:23652965-23652984 | None:intergenic | 50.0% | |
| TACTGGTACTCCAGTTCCGT+TGG | + | chr4.3:23652775-23652794 | None:intergenic | 50.0% | |
| TCCAACACATCCTGCTTGCT+GGG | + | chr4.3:23652294-23652313 | None:intergenic | 50.0% | |
| TGCGAGATGATGAAAGTGGG+GGG | + | chr4.3:23651621-23651640 | None:intergenic | 50.0% | |
| TGCTGATGCTGGAAAGTTGG+TGG | - | chr4.3:23652842-23652861 | MS.gene32028:CDS | 50.0% | |
| TGCTGCTGATGCTGGAAAGT+TGG | - | chr4.3:23652839-23652858 | MS.gene32028:CDS | 50.0% | |
| TGTGGAAGTGGAGAGGATCA+AGG | - | chr4.3:23652479-23652498 | MS.gene32028:CDS | 50.0% | |
| TTCAGCCAGCTTCAGAGCTT+TGG | + | chr4.3:23652553-23652572 | None:intergenic | 50.0% | |
| ! | CATAAGTATGGTGGAGCCCA+AGG | - | chr4.3:23652945-23652964 | MS.gene32028:CDS | 50.0% |
| !! | ACCTATCTATCGGCTCTGCA+TGG | - | chr4.3:23652071-23652090 | MS.gene32028:CDS | 50.0% |
| !! | AGAGGCATCCAGACATGCAA+AGG | - | chr4.3:23652518-23652537 | MS.gene32028:CDS | 50.0% |
| !! | GGATGGTGGGAGTGATTCTA+GGG | - | chr4.3:23651246-23651265 | MS.gene32028:CDS | 50.0% |
| AAGGAAGTGGAACGGAGTGG+TGG | - | chr4.3:23652261-23652280 | MS.gene32028:CDS | 55.0% | |
| AGAGAGGCTCCTAGAAGCTC+AGG | - | chr4.3:23651748-23651767 | MS.gene32028:CDS | 55.0% | |
| AGCAGCAGCTTCCAAGGCAA+TGG | + | chr4.3:23652826-23652845 | None:intergenic | 55.0% | |
| AGCATCAGCAGCAGCTTCCA+AGG | + | chr4.3:23652832-23652851 | None:intergenic | 55.0% | |
| AGCTCGCCGTAGATTGAGAG+AGG | - | chr4.3:23651732-23651751 | MS.gene32028:CDS | 55.0% | |
| AGTAACTGCAGAGTCTGGCG+CGG | - | chr4.3:23652791-23652810 | MS.gene32028:CDS | 55.0% | |
| ATGAAAGCTCTGCTGCGAGG+TGG | - | chr4.3:23652181-23652200 | MS.gene32028:CDS | 55.0% | |
| CAGGAAGAACTGGTGCAGCT+GGG | - | chr4.3:23651170-23651189 | MS.gene32028:CDS | 55.0% | |
| CATCTGCCAGATCTGCCGAT+AGG | - | chr4.3:23651647-23651666 | MS.gene32028:CDS | 55.0% | |
| CATGTCGTCTCCTCGAAGGT+GGG | + | chr4.3:23651213-23651232 | None:intergenic | 55.0% | |
| CCATCATGTCGTCTCCTCGA+AGG | + | chr4.3:23651217-23651236 | None:intergenic | 55.0% | |
| CCTTCGAGGAGACGACATGA+TGG | - | chr4.3:23651214-23651233 | MS.gene32028:CDS | 55.0% | |
| CGACTCTCCTCCACTTGAAG+AGG | - | chr4.3:23652221-23652240 | MS.gene32028:CDS | 55.0% | |
| CTCAATCTACGGCGAGCTTC+TGG | + | chr4.3:23651730-23651749 | None:intergenic | 55.0% | |
| CTGGTGCAGCTGGGAGAAAT+CGG | - | chr4.3:23651179-23651198 | MS.gene32028:CDS | 55.0% | |
| GAGAGGCTCCTAGAAGCTCA+GGG | - | chr4.3:23651749-23651768 | MS.gene32028:CDS | 55.0% | |
| GATGAAGGGTCAACTGGGGA+TGG | - | chr4.3:23651868-23651887 | MS.gene32028:CDS | 55.0% | |
| GATGGCTCCTATTCGGATGG+TGG | - | chr4.3:23651232-23651251 | MS.gene32028:CDS | 55.0% | |
| GATTCCGTCCCTTGATCCAC+CGG | + | chr4.3:23652879-23652898 | None:intergenic | 55.0% | |
| GCGAGATGATGAAAGTGGGG+GGG | + | chr4.3:23651620-23651639 | None:intergenic | 55.0% | |
| GTCCAACACATCCTGCTTGC+TGG | + | chr4.3:23652295-23652314 | None:intergenic | 55.0% | |
| GTTTCTGATGCAGGCGCCAA+CGG | - | chr4.3:23652756-23652775 | MS.gene32028:CDS | 55.0% | |
| TCATGTCGTCTCCTCGAAGG+TGG | + | chr4.3:23651214-23651233 | None:intergenic | 55.0% | |
| TTACGGGACCCTGAGCTTCT+AGG | + | chr4.3:23651760-23651779 | None:intergenic | 55.0% | |
| TTGGAAGCTGCTGCTGATGC+TGG | - | chr4.3:23652831-23652850 | MS.gene32028:CDS | 55.0% | |
| TTGGAGGCTGCAGGAAGAAC+TGG | - | chr4.3:23651160-23651179 | MS.gene32028:CDS | 55.0% | |
| ! | GTTGGTGGATACGAGTGCTC+CGG | - | chr4.3:23652857-23652876 | MS.gene32028:CDS | 55.0% |
| !! | CGGATGGTGGGAGTGATTCT+AGG | - | chr4.3:23651245-23651264 | MS.gene32028:CDS | 55.0% |
| AAGTGGAACGGAGTGGTGGC+CGG | - | chr4.3:23652265-23652284 | MS.gene32028:CDS | 60.0% | |
| ACGAGTGCTCCGGTGGATCA+AGG | - | chr4.3:23652867-23652886 | MS.gene32028:CDS | 60.0% | |
| CGAGTGCTCCGGTGGATCAA+GGG | - | chr4.3:23652868-23652887 | MS.gene32028:CDS | 60.0% | |
| CTCTGCTGCGAGGTGGCAAA+TGG | - | chr4.3:23652188-23652207 | MS.gene32028:CDS | 60.0% | |
| GAAGGGTCAACTGGGGATGG+AGG | - | chr4.3:23651871-23651890 | MS.gene32028:CDS | 60.0% | |
| GATGGGCGAAGCGATCGTGA+AGG | - | chr4.3:23651397-23651416 | MS.gene32028:CDS | 60.0% | |
| GCAGGAAGAACTGGTGCAGC+TGG | - | chr4.3:23651169-23651188 | MS.gene32028:CDS | 60.0% | |
| GCCCAGCAAGCAGGATGTGT+TGG | - | chr4.3:23652290-23652309 | MS.gene32028:CDS | 60.0% | |
| GCGCCAGACTCTGCAGTTAC+TGG | + | chr4.3:23652792-23652811 | None:intergenic | 60.0% | |
| GGCTGACCTATCGGCAGATC+TGG | + | chr4.3:23651656-23651675 | None:intergenic | 60.0% | |
| GGTGGCTACTGCCATTGCCT+TGG | - | chr4.3:23652812-23652831 | MS.gene32028:CDS | 60.0% | |
| TGCTCCGGTGGATCAAGGGA+CGG | - | chr4.3:23652872-23652891 | MS.gene32028:CDS | 60.0% | |
| ! | CATCCTGCTTGCTGGGCATC+CGG | + | chr4.3:23652287-23652306 | None:intergenic | 60.0% |
| !! | GGACGCCAAAGCTCTGAAGC+TGG | - | chr4.3:23652545-23652564 | MS.gene32028:CDS | 60.0% |
| AACTGCAGAGTCTGGCGCGG+TGG | - | chr4.3:23652794-23652813 | MS.gene32028:CDS | 65.0% | |
| GATGCAGGCGCCAACGGAAC+TGG | - | chr4.3:23652762-23652781 | MS.gene32028:CDS | 65.0% | |
| GGCACTCTCTCCCACCTTCG+AGG | - | chr4.3:23651200-23651219 | MS.gene32028:CDS | 65.0% | |
| GGTGGATACGAGTGCTCCGG+TGG | - | chr4.3:23652860-23652879 | MS.gene32028:CDS | 65.0% | |
| TGGTGGAGCCCAAGGAGCTC+AGG | - | chr4.3:23652953-23652972 | MS.gene32028:CDS | 65.0% | |
| GGAGCCCAAGGAGCTCAGGC+AGG | - | chr4.3:23652957-23652976 | MS.gene32028:CDS | 70.0% | |
| TGGCCGGATGCCCAGCAAGC+AGG | - | chr4.3:23652281-23652300 | MS.gene32028:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 23651136 | 23653103 | 23651136 | ID=MS.gene32028 |
| chr4.3 | mRNA | 23651136 | 23653103 | 23651136 | ID=MS.gene32028.t1;Parent=MS.gene32028 |
| chr4.3 | exon | 23651136 | 23653103 | 23651136 | ID=MS.gene32028.t1.exon1;Parent=MS.gene32028.t1 |
| chr4.3 | CDS | 23651136 | 23653103 | 23651136 | ID=cds.MS.gene32028.t1;Parent=MS.gene32028.t1 |
| Gene Sequence |
| Protein sequence |
