Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33412.t1 | XP_013454784.1 | 96.1 | 228 | 8 | 1 | 1 | 228 | 266 | 492 | 1.10E-118 | 436 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33412.t1 | Q8S8P5 | 56.2 | 192 | 60 | 7 | 6 | 195 | 299 | 468 | 1.2e-46 | 188.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33412.t1 | A0A072USH6 | 96.1 | 228 | 8 | 1 | 1 | 228 | 266 | 492 | 7.6e-119 | 436.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene33412.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049283 | MS.gene33412 | 0.822594 | 2.18E-53 | -1.69E-46 |
MS.gene04998 | MS.gene33412 | 0.823823 | 1.13E-53 | -1.69E-46 |
MS.gene051699 | MS.gene33412 | 0.815528 | 8.83E-52 | -1.69E-46 |
MS.gene051959 | MS.gene33412 | 0.841708 | 4.03E-58 | -1.69E-46 |
MS.gene051960 | MS.gene33412 | 0.834169 | 3.50E-56 | -1.69E-46 |
MS.gene052559 | MS.gene33412 | 0.806053 | 9.91E-50 | -1.69E-46 |
MS.gene053602 | MS.gene33412 | 0.807809 | 4.22E-50 | -1.69E-46 |
MS.gene053963 | MS.gene33412 | 0.800879 | 1.17E-48 | -1.69E-46 |
MS.gene054413 | MS.gene33412 | 0.804387 | 2.21E-49 | -1.69E-46 |
MS.gene054490 | MS.gene33412 | 0.837933 | 3.88E-57 | -1.69E-46 |
MS.gene054892 | MS.gene33412 | 0.803923 | 2.76E-49 | -1.69E-46 |
MS.gene054893 | MS.gene33412 | 0.801752 | 7.76E-49 | -1.69E-46 |
MS.gene054957 | MS.gene33412 | 0.80303 | 4.23E-49 | -1.69E-46 |
MS.gene055150 | MS.gene33412 | 0.812276 | 4.60E-51 | -1.69E-46 |
MS.gene05624 | MS.gene33412 | 0.801596 | 8.36E-49 | -1.69E-46 |
MS.gene056530 | MS.gene33412 | 0.806073 | 9.82E-50 | -1.69E-46 |
MS.gene057093 | MS.gene33412 | 0.82701 | 1.98E-54 | -1.69E-46 |
MS.gene057622 | MS.gene33412 | 0.802665 | 5.04E-49 | -1.69E-46 |
MS.gene05952 | MS.gene33412 | 0.841862 | 3.67E-58 | -1.69E-46 |
MS.gene05985 | MS.gene33412 | -0.816209 | 6.22E-52 | -1.69E-46 |
MS.gene06023 | MS.gene33412 | 0.813629 | 2.32E-51 | -1.69E-46 |
MS.gene060977 | MS.gene33412 | 0.806519 | 7.91E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33412.t1 | MTR_4g013260 | 95.197 | 229 | 10 | 1 | 1 | 229 | 266 | 493 | 6.60e-153 | 434 |
MS.gene33412.t1 | MTR_4g013260 | 41.071 | 112 | 55 | 3 | 41 | 150 | 163 | 265 | 2.76e-16 | 77.4 |
MS.gene33412.t1 | MTR_7g071120 | 59.504 | 242 | 79 | 6 | 3 | 229 | 258 | 495 | 8.48e-86 | 263 |
MS.gene33412.t1 | MTR_7g071120 | 56.452 | 62 | 22 | 2 | 71 | 130 | 166 | 224 | 1.73e-15 | 75.1 |
MS.gene33412.t1 | MTR_5g074400 | 70.073 | 137 | 36 | 3 | 8 | 140 | 354 | 489 | 7.21e-60 | 197 |
MS.gene33412.t1 | MTR_5g074400 | 56.452 | 62 | 22 | 2 | 71 | 130 | 243 | 301 | 1.15e-15 | 75.9 |
MS.gene33412.t1 | MTR_3g031220 | 66.901 | 142 | 41 | 3 | 3 | 141 | 297 | 435 | 9.53e-59 | 193 |
MS.gene33412.t1 | MTR_3g031220 | 49.333 | 75 | 33 | 2 | 62 | 132 | 185 | 258 | 2.00e-16 | 77.8 |
MS.gene33412.t1 | MTR_3g009470 | 66.187 | 139 | 38 | 4 | 9 | 145 | 436 | 567 | 4.16e-51 | 176 |
MS.gene33412.t1 | MTR_3g009470 | 56.667 | 60 | 25 | 1 | 71 | 130 | 280 | 338 | 4.67e-15 | 73.9 |
MS.gene33412.t1 | MTR_5g094430 | 75.000 | 96 | 24 | 0 | 51 | 146 | 210 | 305 | 7.90e-47 | 160 |
MS.gene33412.t1 | MTR_5g094430 | 55.000 | 60 | 26 | 1 | 71 | 130 | 66 | 124 | 1.24e-13 | 69.7 |
MS.gene33412.t1 | MTR_5g094430 | 75.000 | 96 | 24 | 0 | 51 | 146 | 232 | 327 | 9.60e-47 | 160 |
MS.gene33412.t1 | MTR_5g094430 | 55.000 | 60 | 26 | 1 | 71 | 130 | 88 | 146 | 1.15e-13 | 69.7 |
MS.gene33412.t1 | MTR_5g094430 | 75.789 | 95 | 23 | 0 | 52 | 146 | 345 | 439 | 3.01e-46 | 161 |
MS.gene33412.t1 | MTR_5g094430 | 55.000 | 60 | 26 | 1 | 71 | 130 | 200 | 258 | 7.59e-14 | 70.5 |
MS.gene33412.t1 | MTR_3g056100 | 80.233 | 86 | 17 | 0 | 48 | 133 | 235 | 320 | 7.91e-46 | 158 |
MS.gene33412.t1 | MTR_3g056100 | 56.667 | 60 | 25 | 1 | 71 | 130 | 99 | 157 | 1.81e-14 | 72.0 |
MS.gene33412.t1 | MTR_3g056100 | 80.233 | 86 | 17 | 0 | 48 | 133 | 248 | 333 | 8.50e-46 | 158 |
MS.gene33412.t1 | MTR_3g056100 | 56.667 | 60 | 25 | 1 | 71 | 130 | 99 | 157 | 1.65e-14 | 72.4 |
MS.gene33412.t1 | MTR_3g056100 | 80.233 | 86 | 17 | 0 | 48 | 133 | 379 | 464 | 1.75e-45 | 159 |
MS.gene33412.t1 | MTR_3g056100 | 56.667 | 60 | 25 | 1 | 71 | 130 | 243 | 301 | 1.02e-14 | 73.2 |
MS.gene33412.t1 | MTR_7g080020 | 61.765 | 136 | 36 | 4 | 26 | 155 | 451 | 576 | 1.94e-45 | 161 |
MS.gene33412.t1 | MTR_7g080020 | 49.412 | 85 | 39 | 3 | 71 | 152 | 280 | 363 | 2.29e-15 | 75.1 |
MS.gene33412.t1 | MTR_5g042920 | 71.717 | 99 | 28 | 0 | 47 | 145 | 296 | 394 | 1.94e-45 | 157 |
MS.gene33412.t1 | MTR_5g042920 | 61.290 | 62 | 19 | 3 | 71 | 130 | 151 | 209 | 7.08e-16 | 76.3 |
MS.gene33412.t1 | MTR_3g056100 | 80.233 | 86 | 17 | 0 | 48 | 133 | 392 | 477 | 2.03e-45 | 159 |
MS.gene33412.t1 | MTR_3g056100 | 56.667 | 60 | 25 | 1 | 71 | 130 | 243 | 301 | 1.01e-14 | 73.2 |
MS.gene33412.t1 | MTR_7g011820 | 64.545 | 110 | 28 | 1 | 52 | 161 | 391 | 489 | 5.19e-44 | 154 |
MS.gene33412.t1 | MTR_7g011820 | 42.609 | 115 | 40 | 4 | 54 | 152 | 196 | 300 | 5.75e-16 | 76.6 |
MS.gene33412.t1 | MTR_7g080000 | 60.305 | 131 | 40 | 3 | 6 | 133 | 373 | 494 | 7.22e-44 | 156 |
MS.gene33412.t1 | MTR_7g080000 | 61.905 | 63 | 19 | 3 | 70 | 130 | 233 | 292 | 2.60e-15 | 74.7 |
MS.gene33412.t1 | MTR_4g082580 | 53.030 | 132 | 56 | 2 | 24 | 155 | 237 | 362 | 8.12e-42 | 146 |
MS.gene33412.t1 | MTR_4g082580 | 55.000 | 60 | 27 | 0 | 71 | 130 | 145 | 204 | 1.12e-13 | 69.7 |
MS.gene33412.t1 | MTR_5g097490 | 48.872 | 133 | 55 | 2 | 31 | 163 | 215 | 334 | 2.83e-35 | 129 |
MS.gene33412.t1 | MTR_5g097490 | 42.466 | 73 | 41 | 1 | 69 | 141 | 90 | 161 | 1.50e-11 | 63.5 |
MS.gene33412.t1 | MTR_1g077780 | 65.823 | 79 | 27 | 0 | 52 | 130 | 43 | 121 | 9.37e-34 | 119 |
MS.gene33412.t1 | MTR_7g100510 | 56.000 | 100 | 41 | 1 | 32 | 131 | 325 | 421 | 1.08e-33 | 125 |
MS.gene33412.t1 | MTR_7g100510 | 44.944 | 89 | 43 | 3 | 47 | 130 | 160 | 247 | 9.58e-15 | 72.8 |
MS.gene33412.t1 | MTR_3g031220 | 64.130 | 92 | 27 | 3 | 3 | 91 | 297 | 385 | 2.32e-30 | 115 |
MS.gene33412.t1 | MTR_3g031220 | 49.333 | 75 | 33 | 2 | 62 | 132 | 185 | 258 | 1.10e-16 | 78.2 |
MS.gene33412.t1 | MTR_8g007270 | 61.842 | 76 | 29 | 0 | 52 | 127 | 135 | 210 | 7.28e-30 | 111 |
MS.gene33412.t1 | MTR_4g094588 | 64.865 | 74 | 26 | 0 | 57 | 130 | 164 | 237 | 7.83e-30 | 113 |
MS.gene33412.t1 | MTR_1g015140 | 61.842 | 76 | 28 | 1 | 52 | 127 | 84 | 158 | 1.20e-28 | 106 |
MS.gene33412.t1 | MTR_4g130900 | 40.136 | 147 | 77 | 2 | 46 | 186 | 334 | 475 | 6.10e-28 | 110 |
MS.gene33412.t1 | MTR_3g095080 | 59.459 | 74 | 30 | 0 | 54 | 127 | 151 | 224 | 7.77e-28 | 106 |
MS.gene33412.t1 | MTR_3g095080 | 59.459 | 74 | 30 | 0 | 54 | 127 | 127 | 200 | 8.51e-28 | 105 |
MS.gene33412.t1 | MTR_2g033820 | 53.261 | 92 | 43 | 0 | 55 | 146 | 187 | 278 | 1.07e-27 | 108 |
MS.gene33412.t1 | MTR_7g109800 | 46.218 | 119 | 54 | 2 | 52 | 170 | 126 | 234 | 1.29e-27 | 107 |
MS.gene33412.t1 | MTR_5g091390 | 62.162 | 74 | 28 | 0 | 57 | 130 | 143 | 216 | 1.30e-27 | 107 |
MS.gene33412.t1 | MTR_8g096730 | 55.422 | 83 | 37 | 0 | 47 | 129 | 46 | 128 | 1.93e-27 | 102 |
MS.gene33412.t1 | MTR_1g086790 | 57.895 | 76 | 32 | 0 | 55 | 130 | 142 | 217 | 7.77e-27 | 105 |
MS.gene33412.t1 | MTR_3g104750 | 55.263 | 76 | 34 | 0 | 52 | 127 | 85 | 160 | 1.37e-26 | 100 |
MS.gene33412.t1 | MTR_8g092140 | 58.667 | 75 | 30 | 1 | 54 | 127 | 142 | 216 | 1.55e-26 | 102 |
MS.gene33412.t1 | MTR_5g043880 | 56.962 | 79 | 34 | 0 | 49 | 127 | 102 | 180 | 1.63e-26 | 103 |
MS.gene33412.t1 | MTR_8g092010 | 39.098 | 133 | 79 | 1 | 1 | 131 | 36 | 168 | 2.08e-26 | 100 |
MS.gene33412.t1 | MTR_7g028415 | 63.235 | 68 | 25 | 0 | 62 | 129 | 84 | 151 | 4.01e-26 | 100 |
MS.gene33412.t1 | MTR_7g028710 | 63.235 | 68 | 25 | 0 | 62 | 129 | 84 | 151 | 4.01e-26 | 100 |
MS.gene33412.t1 | MTR_7g079010 | 60.526 | 76 | 30 | 0 | 52 | 127 | 122 | 197 | 4.50e-26 | 101 |
MS.gene33412.t1 | MTR_4g132430 | 51.899 | 79 | 37 | 1 | 53 | 130 | 109 | 187 | 8.86e-25 | 100 |
MS.gene33412.t1 | MTR_3g095040 | 54.667 | 75 | 34 | 0 | 57 | 131 | 104 | 178 | 1.83e-24 | 96.7 |
MS.gene33412.t1 | MTR_2g023930 | 51.899 | 79 | 37 | 1 | 53 | 130 | 287 | 365 | 1.93e-24 | 101 |
MS.gene33412.t1 | MTR_3g053330 | 44.681 | 94 | 51 | 1 | 54 | 146 | 234 | 327 | 2.10e-24 | 100 |
MS.gene33412.t1 | MTR_7g110720 | 53.247 | 77 | 35 | 1 | 55 | 130 | 173 | 249 | 2.23e-24 | 100 |
MS.gene33412.t1 | MTR_7g110720 | 50.000 | 84 | 41 | 1 | 48 | 130 | 193 | 276 | 2.31e-24 | 100 |
MS.gene33412.t1 | MTR_4g094412 | 53.165 | 79 | 36 | 1 | 55 | 132 | 227 | 305 | 2.34e-24 | 100 |
MS.gene33412.t1 | MTR_4g094412 | 53.165 | 79 | 36 | 1 | 55 | 132 | 218 | 296 | 2.40e-24 | 100 |
MS.gene33412.t1 | MTR_4g132430 | 51.899 | 79 | 37 | 1 | 53 | 130 | 243 | 321 | 3.45e-24 | 100 |
MS.gene33412.t1 | MTR_4g107970 | 51.899 | 79 | 37 | 1 | 54 | 131 | 161 | 239 | 5.01e-24 | 100 |
MS.gene33412.t1 | MTR_4g107970 | 51.899 | 79 | 37 | 1 | 54 | 131 | 238 | 316 | 7.93e-24 | 99.8 |
MS.gene33412.t1 | MTR_2g088000 | 51.899 | 79 | 37 | 1 | 53 | 130 | 331 | 409 | 9.48e-24 | 99.4 |
MS.gene33412.t1 | MTR_4g122530 | 53.247 | 77 | 36 | 0 | 55 | 131 | 192 | 268 | 2.47e-23 | 97.4 |
MS.gene33412.t1 | MTR_5g097500 | 47.126 | 87 | 46 | 0 | 56 | 142 | 215 | 301 | 5.36e-23 | 95.1 |
MS.gene33412.t1 | MTR_1g009613 | 38.168 | 131 | 65 | 4 | 12 | 129 | 194 | 321 | 3.05e-22 | 93.2 |
MS.gene33412.t1 | MTR_3g009470 | 61.176 | 85 | 26 | 3 | 9 | 91 | 436 | 515 | 3.40e-22 | 94.7 |
MS.gene33412.t1 | MTR_3g009470 | 56.667 | 60 | 25 | 1 | 71 | 130 | 280 | 338 | 4.27e-15 | 73.9 |
MS.gene33412.t1 | MTR_1g078260 | 46.667 | 105 | 54 | 2 | 25 | 127 | 200 | 304 | 4.08e-22 | 94.4 |
MS.gene33412.t1 | MTR_4g094908 | 50.633 | 79 | 35 | 2 | 52 | 129 | 250 | 325 | 4.85e-22 | 92.8 |
MS.gene33412.t1 | MTR_2g105060 | 41.525 | 118 | 53 | 4 | 48 | 160 | 144 | 250 | 5.98e-22 | 92.0 |
MS.gene33412.t1 | MTR_2g105060 | 41.880 | 117 | 52 | 4 | 49 | 160 | 70 | 175 | 6.59e-22 | 90.5 |
MS.gene33412.t1 | MTR_2g045360 | 45.361 | 97 | 45 | 3 | 50 | 141 | 193 | 286 | 9.78e-22 | 92.8 |
MS.gene33412.t1 | MTR_4g049790 | 49.367 | 79 | 39 | 1 | 53 | 130 | 294 | 372 | 9.97e-22 | 93.6 |
MS.gene33412.t1 | MTR_7g009730 | 50.649 | 77 | 37 | 1 | 54 | 129 | 202 | 278 | 1.46e-21 | 92.8 |
MS.gene33412.t1 | MTR_5g016610 | 53.333 | 75 | 34 | 1 | 58 | 131 | 186 | 260 | 2.24e-21 | 89.7 |
MS.gene33412.t1 | MTR_6g086555 | 52.632 | 76 | 35 | 1 | 57 | 131 | 192 | 267 | 3.16e-21 | 91.3 |
MS.gene33412.t1 | MTR_4g049760 | 40.708 | 113 | 53 | 2 | 58 | 156 | 277 | 389 | 1.62e-20 | 89.7 |
MS.gene33412.t1 | MTR_3g106060 | 36.567 | 134 | 67 | 3 | 12 | 127 | 62 | 195 | 2.87e-19 | 84.7 |
MS.gene33412.t1 | MTR_4g127040 | 49.351 | 77 | 35 | 2 | 52 | 127 | 229 | 302 | 3.71e-19 | 84.7 |
MS.gene33412.t1 | MTR_4g007060 | 41.748 | 103 | 45 | 3 | 69 | 162 | 126 | 222 | 3.91e-19 | 84.0 |
MS.gene33412.t1 | MTR_1g070455 | 49.351 | 77 | 35 | 2 | 52 | 127 | 277 | 350 | 4.46e-19 | 84.7 |
MS.gene33412.t1 | MTR_4g007060 | 41.748 | 103 | 45 | 3 | 69 | 162 | 160 | 256 | 5.17e-19 | 84.3 |
MS.gene33412.t1 | MTR_7g062220 | 59.649 | 57 | 23 | 0 | 71 | 127 | 124 | 180 | 1.01e-18 | 83.6 |
MS.gene33412.t1 | MTR_1g013760 | 41.304 | 92 | 48 | 3 | 42 | 127 | 106 | 197 | 8.49e-18 | 80.5 |
MS.gene33412.t1 | MTR_1g013790 | 41.758 | 91 | 52 | 1 | 59 | 148 | 89 | 179 | 1.13e-17 | 79.7 |
MS.gene33412.t1 | MTR_4g047580 | 34.746 | 118 | 63 | 2 | 53 | 156 | 263 | 380 | 2.35e-16 | 77.8 |
MS.gene33412.t1 | MTR_1g099600 | 35.577 | 104 | 65 | 2 | 52 | 154 | 167 | 269 | 2.78e-16 | 76.6 |
MS.gene33412.t1 | MTR_2g032030 | 42.045 | 88 | 49 | 2 | 64 | 150 | 261 | 347 | 3.20e-16 | 77.4 |
MS.gene33412.t1 | MTR_3g108960 | 43.590 | 78 | 43 | 1 | 52 | 128 | 295 | 372 | 4.49e-16 | 76.6 |
MS.gene33412.t1 | MTR_7g109600 | 50.000 | 62 | 30 | 1 | 72 | 132 | 54 | 115 | 4.75e-16 | 75.5 |
MS.gene33412.t1 | MTR_8g087000 | 44.444 | 72 | 39 | 1 | 72 | 142 | 78 | 149 | 5.01e-16 | 75.1 |
MS.gene33412.t1 | MTR_2g032030 | 42.045 | 88 | 49 | 2 | 64 | 150 | 261 | 347 | 5.07e-16 | 76.6 |
MS.gene33412.t1 | MTR_8g087000 | 44.444 | 72 | 39 | 1 | 72 | 142 | 77 | 148 | 5.41e-16 | 74.7 |
MS.gene33412.t1 | MTR_2g083870 | 47.826 | 69 | 35 | 1 | 72 | 139 | 81 | 149 | 1.51e-15 | 73.9 |
MS.gene33412.t1 | MTR_8g028565 | 42.391 | 92 | 41 | 3 | 72 | 162 | 156 | 236 | 2.28e-15 | 74.3 |
MS.gene33412.t1 | MTR_8g098945 | 49.231 | 65 | 32 | 1 | 70 | 133 | 128 | 192 | 2.69e-15 | 73.2 |
MS.gene33412.t1 | MTR_0117s0040 | 45.455 | 77 | 39 | 2 | 52 | 127 | 57 | 131 | 2.78e-15 | 72.8 |
MS.gene33412.t1 | MTR_2g024350 | 48.485 | 66 | 33 | 1 | 66 | 130 | 3 | 68 | 2.98e-15 | 72.4 |
MS.gene33412.t1 | MTR_2g016770 | 43.902 | 82 | 38 | 2 | 72 | 152 | 36 | 110 | 6.38e-15 | 71.2 |
MS.gene33412.t1 | MTR_2g016770 | 43.902 | 82 | 38 | 2 | 72 | 152 | 28 | 102 | 9.80e-15 | 70.9 |
MS.gene33412.t1 | MTR_2g024380 | 48.485 | 66 | 33 | 1 | 66 | 130 | 246 | 311 | 1.15e-14 | 72.8 |
MS.gene33412.t1 | MTR_1g077760 | 67.500 | 40 | 13 | 0 | 52 | 91 | 95 | 134 | 2.42e-14 | 67.8 |
MS.gene33412.t1 | MTR_7g079040 | 51.667 | 60 | 28 | 1 | 72 | 130 | 155 | 214 | 3.25e-14 | 70.9 |
MS.gene33412.t1 | MTR_5g074200 | 53.333 | 60 | 27 | 1 | 71 | 130 | 220 | 278 | 7.39e-14 | 69.7 |
MS.gene33412.t1 | MTR_8g067635 | 41.667 | 84 | 39 | 2 | 69 | 151 | 347 | 421 | 1.97e-13 | 69.3 |
MS.gene33412.t1 | MTR_8g069935 | 40.845 | 71 | 38 | 2 | 71 | 140 | 331 | 398 | 2.47e-13 | 68.9 |
MS.gene33412.t1 | MTR_5g044695 | 52.174 | 46 | 22 | 0 | 53 | 98 | 59 | 104 | 3.39e-13 | 64.3 |
MS.gene33412.t1 | MTR_8g067650 | 41.667 | 84 | 39 | 2 | 69 | 151 | 337 | 411 | 4.43e-13 | 68.2 |
MS.gene33412.t1 | MTR_3g090860 | 40.789 | 76 | 40 | 2 | 70 | 142 | 132 | 205 | 2.33e-12 | 65.5 |
MS.gene33412.t1 | MTR_6g053200 | 39.437 | 71 | 42 | 1 | 71 | 140 | 330 | 400 | 5.03e-12 | 65.1 |
MS.gene33412.t1 | MTR_6g038890 | 52.174 | 46 | 22 | 0 | 53 | 98 | 170 | 215 | 7.01e-12 | 63.2 |
MS.gene33412.t1 | MTR_3g095080 | 60.000 | 40 | 16 | 0 | 54 | 93 | 151 | 190 | 1.26e-11 | 62.0 |
MS.gene33412.t1 | MTR_8g099350 | 48.276 | 58 | 27 | 1 | 71 | 125 | 132 | 189 | 1.55e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene33412.t1 | AT2G38470 | 56.250 | 192 | 60 | 7 | 6 | 195 | 299 | 468 | 1.00e-60 | 199 |
MS.gene33412.t1 | AT2G38470 | 54.839 | 62 | 23 | 2 | 71 | 130 | 184 | 242 | 3.28e-15 | 74.3 |
MS.gene33412.t1 | AT5G56270 | 75.728 | 103 | 22 | 1 | 31 | 133 | 450 | 549 | 7.98e-48 | 167 |
MS.gene33412.t1 | AT5G56270 | 55.738 | 61 | 24 | 2 | 71 | 130 | 273 | 331 | 4.78e-14 | 71.2 |
MS.gene33412.t1 | AT5G07100 | 68.966 | 116 | 20 | 3 | 21 | 133 | 101 | 203 | 3.46e-47 | 155 |
MS.gene33412.t1 | AT5G07100 | 40.217 | 92 | 44 | 1 | 59 | 139 | 1 | 92 | 5.56e-15 | 71.6 |
MS.gene33412.t1 | AT5G07100 | 68.966 | 116 | 20 | 3 | 21 | 133 | 101 | 203 | 3.46e-47 | 155 |
MS.gene33412.t1 | AT5G07100 | 40.217 | 92 | 44 | 1 | 59 | 139 | 1 | 92 | 5.56e-15 | 71.6 |
MS.gene33412.t1 | AT5G07100 | 68.966 | 116 | 20 | 3 | 21 | 133 | 101 | 203 | 3.46e-47 | 155 |
MS.gene33412.t1 | AT5G07100 | 40.217 | 92 | 44 | 1 | 59 | 139 | 1 | 92 | 5.56e-15 | 71.6 |
MS.gene33412.t1 | AT5G07100 | 68.966 | 116 | 20 | 3 | 21 | 133 | 101 | 203 | 3.46e-47 | 155 |
MS.gene33412.t1 | AT5G07100 | 40.217 | 92 | 44 | 1 | 59 | 139 | 1 | 92 | 5.56e-15 | 71.6 |
MS.gene33412.t1 | AT5G07100 | 68.966 | 116 | 20 | 3 | 21 | 133 | 194 | 296 | 5.18e-47 | 157 |
MS.gene33412.t1 | AT5G07100 | 40.426 | 94 | 45 | 1 | 57 | 139 | 92 | 185 | 6.98e-16 | 75.5 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 164 | 277 | 1.99e-46 | 158 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 33 | 93 | 2.96e-14 | 71.2 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 164 | 277 | 1.99e-46 | 158 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 33 | 93 | 2.96e-14 | 71.2 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 164 | 277 | 1.99e-46 | 158 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 33 | 93 | 2.96e-14 | 71.2 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 164 | 277 | 1.99e-46 | 158 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 33 | 93 | 2.96e-14 | 71.2 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 300 | 413 | 5.17e-46 | 160 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 169 | 229 | 2.07e-14 | 72.0 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 268 | 381 | 5.52e-46 | 159 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 137 | 197 | 2.50e-14 | 72.0 |
MS.gene33412.t1 | AT4G26640 | 63.333 | 120 | 38 | 1 | 24 | 143 | 340 | 453 | 8.14e-46 | 160 |
MS.gene33412.t1 | AT4G26640 | 54.839 | 62 | 27 | 1 | 69 | 130 | 209 | 269 | 1.87e-14 | 72.4 |
MS.gene33412.t1 | AT1G13960 | 68.224 | 107 | 24 | 1 | 34 | 130 | 209 | 315 | 2.80e-45 | 154 |
MS.gene33412.t1 | AT1G13960 | 60.000 | 60 | 23 | 1 | 71 | 130 | 76 | 134 | 2.40e-16 | 77.4 |
MS.gene33412.t1 | AT1G13960 | 68.224 | 107 | 24 | 1 | 34 | 130 | 362 | 468 | 6.24e-45 | 157 |
MS.gene33412.t1 | AT1G13960 | 60.000 | 60 | 23 | 1 | 71 | 130 | 229 | 287 | 8.06e-17 | 79.3 |
MS.gene33412.t1 | AT2G03340 | 66.055 | 109 | 36 | 1 | 52 | 160 | 396 | 503 | 8.67e-44 | 154 |
MS.gene33412.t1 | AT2G03340 | 49.425 | 87 | 38 | 2 | 71 | 152 | 250 | 335 | 4.44e-18 | 82.8 |
MS.gene33412.t1 | AT3G01080 | 82.278 | 79 | 14 | 0 | 52 | 130 | 325 | 403 | 1.55e-42 | 149 |
MS.gene33412.t1 | AT3G01080 | 53.968 | 63 | 28 | 1 | 71 | 133 | 205 | 266 | 2.38e-14 | 72.0 |
MS.gene33412.t1 | AT3G01080 | 82.278 | 79 | 14 | 0 | 52 | 130 | 287 | 365 | 1.90e-42 | 149 |
MS.gene33412.t1 | AT3G01080 | 53.968 | 63 | 28 | 1 | 71 | 133 | 167 | 228 | 2.62e-14 | 71.6 |
MS.gene33412.t1 | AT4G26440 | 52.841 | 176 | 69 | 5 | 9 | 176 | 312 | 481 | 2.59e-42 | 150 |
MS.gene33412.t1 | AT4G26440 | 53.226 | 62 | 24 | 2 | 71 | 130 | 178 | 236 | 2.35e-13 | 68.9 |
MS.gene33412.t1 | AT2G30250 | 66.327 | 98 | 31 | 1 | 33 | 130 | 292 | 387 | 6.60e-40 | 141 |
MS.gene33412.t1 | AT2G30250 | 45.055 | 91 | 42 | 3 | 40 | 130 | 142 | 224 | 4.83e-14 | 70.9 |
MS.gene33412.t1 | AT2G04880 | 62.353 | 85 | 32 | 0 | 52 | 136 | 264 | 348 | 2.05e-33 | 125 |
MS.gene33412.t1 | AT2G04880 | 46.269 | 67 | 35 | 1 | 69 | 135 | 109 | 174 | 4.68e-14 | 70.9 |
MS.gene33412.t1 | AT2G04880 | 62.353 | 85 | 32 | 0 | 52 | 136 | 288 | 372 | 3.88e-33 | 125 |
MS.gene33412.t1 | AT2G04880 | 46.269 | 67 | 35 | 1 | 69 | 135 | 109 | 174 | 5.14e-14 | 70.9 |
MS.gene33412.t1 | AT2G44745 | 47.748 | 111 | 57 | 1 | 17 | 127 | 92 | 201 | 2.97e-30 | 112 |
MS.gene33412.t1 | AT4G18170 | 63.158 | 76 | 28 | 0 | 55 | 130 | 156 | 231 | 4.35e-30 | 114 |
MS.gene33412.t1 | AT1G29860 | 64.474 | 76 | 27 | 0 | 55 | 130 | 120 | 195 | 1.61e-29 | 111 |
MS.gene33412.t1 | AT1G55600 | 60.494 | 81 | 32 | 0 | 50 | 130 | 286 | 366 | 9.36e-29 | 112 |
MS.gene33412.t1 | AT4G30935 | 51.485 | 101 | 45 | 1 | 33 | 133 | 297 | 393 | 1.03e-28 | 112 |
MS.gene33412.t1 | AT4G39410 | 61.842 | 76 | 29 | 0 | 52 | 127 | 204 | 279 | 1.41e-28 | 109 |
MS.gene33412.t1 | AT5G46350 | 59.740 | 77 | 31 | 0 | 57 | 133 | 169 | 245 | 1.46e-28 | 110 |
MS.gene33412.t1 | AT5G26170 | 60.000 | 70 | 28 | 0 | 58 | 127 | 100 | 169 | 1.49e-27 | 103 |
MS.gene33412.t1 | AT5G49520 | 59.740 | 77 | 31 | 0 | 55 | 131 | 205 | 281 | 6.13e-27 | 107 |
MS.gene33412.t1 | AT2G47260 | 57.143 | 84 | 35 | 1 | 55 | 137 | 158 | 241 | 6.98e-27 | 105 |
MS.gene33412.t1 | AT5G13080 | 49.000 | 100 | 43 | 1 | 38 | 129 | 26 | 125 | 1.02e-26 | 100 |
MS.gene33412.t1 | AT3G01970 | 62.500 | 72 | 27 | 0 | 58 | 129 | 52 | 123 | 1.06e-26 | 100 |
MS.gene33412.t1 | AT5G41570 | 57.895 | 76 | 32 | 0 | 52 | 127 | 79 | 154 | 1.42e-26 | 101 |
MS.gene33412.t1 | AT1G69310 | 57.895 | 76 | 32 | 0 | 52 | 127 | 128 | 203 | 1.63e-26 | 103 |
MS.gene33412.t1 | AT1G69310 | 57.895 | 76 | 32 | 0 | 52 | 127 | 128 | 203 | 1.63e-26 | 103 |
MS.gene33412.t1 | AT1G69310 | 57.895 | 76 | 32 | 0 | 52 | 127 | 128 | 203 | 1.63e-26 | 103 |
MS.gene33412.t1 | AT2G37260 | 57.143 | 91 | 39 | 0 | 60 | 150 | 258 | 348 | 1.71e-26 | 105 |
MS.gene33412.t1 | AT2G37260 | 54.286 | 70 | 28 | 2 | 72 | 138 | 86 | 154 | 1.30e-14 | 72.4 |
MS.gene33412.t1 | AT2G37260 | 57.143 | 91 | 39 | 0 | 60 | 150 | 256 | 346 | 1.74e-26 | 105 |
MS.gene33412.t1 | AT2G37260 | 54.286 | 70 | 28 | 2 | 72 | 138 | 84 | 152 | 1.28e-14 | 72.4 |
MS.gene33412.t1 | AT1G64000 | 55.696 | 79 | 35 | 0 | 49 | 127 | 92 | 170 | 2.14e-26 | 101 |
MS.gene33412.t1 | AT2G37260 | 57.143 | 91 | 39 | 0 | 60 | 150 | 338 | 428 | 4.72e-26 | 105 |
MS.gene33412.t1 | AT2G37260 | 54.286 | 70 | 28 | 2 | 72 | 138 | 166 | 234 | 1.54e-14 | 72.4 |
MS.gene33412.t1 | AT4G04450 | 54.430 | 79 | 35 | 1 | 53 | 130 | 180 | 258 | 1.63e-25 | 103 |
MS.gene33412.t1 | AT5G64810 | 59.155 | 71 | 29 | 0 | 58 | 128 | 97 | 167 | 2.16e-25 | 98.6 |
MS.gene33412.t1 | AT4G04450 | 54.430 | 79 | 35 | 1 | 53 | 130 | 274 | 352 | 5.62e-25 | 102 |
MS.gene33412.t1 | AT5G15130 | 53.165 | 79 | 36 | 1 | 54 | 131 | 168 | 246 | 9.75e-25 | 102 |
MS.gene33412.t1 | AT1G62300 | 53.165 | 79 | 36 | 1 | 53 | 130 | 294 | 372 | 1.11e-24 | 102 |
MS.gene33412.t1 | AT5G15130 | 53.165 | 79 | 36 | 1 | 54 | 131 | 210 | 288 | 1.39e-24 | 101 |
MS.gene33412.t1 | AT2G46130 | 56.579 | 76 | 33 | 0 | 52 | 127 | 11 | 86 | 1.41e-24 | 94.0 |
MS.gene33412.t1 | AT1G68150 | 53.165 | 79 | 36 | 1 | 55 | 132 | 219 | 297 | 2.08e-24 | 99.8 |
MS.gene33412.t1 | AT4G22070 | 53.165 | 79 | 36 | 1 | 53 | 130 | 279 | 357 | 2.20e-24 | 100 |
MS.gene33412.t1 | AT4G22070 | 53.165 | 79 | 36 | 1 | 53 | 130 | 279 | 357 | 2.20e-24 | 100 |
MS.gene33412.t1 | AT4G22070 | 53.165 | 79 | 36 | 1 | 53 | 130 | 279 | 357 | 2.20e-24 | 100 |
MS.gene33412.t1 | AT4G22070 | 53.165 | 79 | 36 | 1 | 53 | 130 | 279 | 357 | 2.20e-24 | 100 |
MS.gene33412.t1 | AT1G18860 | 53.846 | 78 | 35 | 1 | 54 | 130 | 222 | 299 | 4.14e-24 | 100 |
MS.gene33412.t1 | AT3G62340 | 57.143 | 77 | 33 | 0 | 55 | 131 | 102 | 178 | 2.10e-23 | 95.5 |
MS.gene33412.t1 | AT4G31550 | 50.538 | 93 | 41 | 3 | 52 | 142 | 230 | 319 | 1.64e-22 | 94.0 |
MS.gene33412.t1 | AT4G31550 | 50.538 | 93 | 41 | 3 | 52 | 142 | 229 | 318 | 1.69e-22 | 94.0 |
MS.gene33412.t1 | AT4G01720 | 50.649 | 77 | 37 | 1 | 55 | 130 | 223 | 299 | 9.03e-22 | 93.6 |
MS.gene33412.t1 | AT2G23320 | 49.367 | 79 | 36 | 2 | 52 | 129 | 224 | 299 | 1.06e-21 | 91.7 |
MS.gene33412.t1 | AT1G69310 | 53.947 | 76 | 31 | 1 | 52 | 127 | 128 | 199 | 1.77e-21 | 90.5 |
MS.gene33412.t1 | AT4G24240 | 53.333 | 75 | 34 | 1 | 58 | 131 | 268 | 342 | 2.37e-21 | 91.3 |
MS.gene33412.t1 | AT2G24570 | 54.545 | 77 | 31 | 2 | 52 | 127 | 227 | 300 | 7.08e-21 | 89.4 |
MS.gene33412.t1 | AT1G80840 | 38.983 | 118 | 56 | 3 | 69 | 170 | 144 | 261 | 1.60e-20 | 88.2 |
MS.gene33412.t1 | AT5G28650 | 50.649 | 77 | 34 | 2 | 52 | 127 | 246 | 319 | 2.12e-20 | 88.2 |
MS.gene33412.t1 | AT3G04670 | 50.649 | 77 | 34 | 2 | 52 | 127 | 246 | 319 | 5.64e-20 | 87.0 |
MS.gene33412.t1 | AT2G21900 | 50.000 | 74 | 34 | 1 | 60 | 130 | 95 | 168 | 6.34e-20 | 84.7 |
MS.gene33412.t1 | AT2G46130 | 52.632 | 76 | 32 | 1 | 52 | 127 | 11 | 82 | 1.31e-19 | 81.3 |
MS.gene33412.t1 | AT2G30590 | 50.649 | 77 | 37 | 1 | 52 | 127 | 294 | 370 | 2.80e-19 | 85.5 |
MS.gene33412.t1 | AT4G23550 | 42.391 | 92 | 52 | 1 | 60 | 150 | 129 | 220 | 5.21e-19 | 84.3 |
MS.gene33412.t1 | AT1G69810 | 35.659 | 129 | 67 | 3 | 19 | 131 | 79 | 207 | 1.03e-18 | 83.6 |
MS.gene33412.t1 | AT1G69810 | 35.659 | 129 | 67 | 3 | 19 | 131 | 137 | 265 | 1.24e-18 | 84.0 |
MS.gene33412.t1 | AT2G25000 | 48.387 | 62 | 31 | 1 | 70 | 130 | 102 | 163 | 1.41e-17 | 79.0 |
MS.gene33412.t1 | AT2G25000 | 48.387 | 62 | 31 | 1 | 70 | 130 | 102 | 163 | 1.41e-17 | 79.0 |
MS.gene33412.t1 | AT2G25000 | 48.387 | 62 | 31 | 1 | 70 | 130 | 124 | 185 | 2.44e-17 | 78.6 |
MS.gene33412.t1 | AT4G31800 | 43.836 | 73 | 40 | 1 | 59 | 130 | 99 | 171 | 2.50e-17 | 78.6 |
MS.gene33412.t1 | AT2G25000 | 48.387 | 62 | 31 | 1 | 70 | 130 | 145 | 206 | 3.49e-17 | 78.6 |
MS.gene33412.t1 | AT4G31800 | 43.836 | 73 | 40 | 1 | 59 | 130 | 164 | 236 | 3.67e-17 | 79.0 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 4.65e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.69e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 4.65e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.69e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 4.72e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.88e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 4.72e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.51e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.07e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.69e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.07e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.69e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.34e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 3.82e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.63e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 4.06e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.77e-17 | 79.7 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 5.27e-12 | 65.5 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 583 | 661 | 5.87e-17 | 80.1 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 467 | 526 | 4.00e-12 | 65.9 |
MS.gene33412.t1 | AT4G12020 | 53.086 | 81 | 36 | 1 | 11 | 91 | 516 | 594 | 6.08e-17 | 79.7 |
MS.gene33412.t1 | AT4G12020 | 49.180 | 61 | 30 | 1 | 70 | 130 | 400 | 459 | 4.18e-12 | 65.9 |
MS.gene33412.t1 | AT5G43290 | 55.932 | 59 | 26 | 0 | 69 | 127 | 112 | 170 | 1.12e-16 | 77.4 |
MS.gene33412.t1 | AT5G52830 | 35.294 | 119 | 66 | 3 | 52 | 169 | 147 | 255 | 2.44e-16 | 77.0 |
MS.gene33412.t1 | AT1G29280 | 50.820 | 61 | 29 | 1 | 72 | 131 | 75 | 135 | 2.54e-16 | 75.9 |
MS.gene33412.t1 | AT4G01250 | 52.381 | 63 | 29 | 1 | 72 | 133 | 129 | 191 | 2.72e-16 | 76.6 |
MS.gene33412.t1 | AT1G30650 | 40.741 | 81 | 47 | 1 | 54 | 133 | 200 | 280 | 2.62e-15 | 74.7 |
MS.gene33412.t1 | AT2G34830 | 40.741 | 81 | 47 | 1 | 54 | 133 | 198 | 278 | 3.01e-15 | 74.3 |
MS.gene33412.t1 | AT2G34830 | 40.741 | 81 | 47 | 1 | 54 | 133 | 207 | 287 | 3.19e-15 | 74.3 |
MS.gene33412.t1 | AT3G01080 | 53.968 | 63 | 28 | 1 | 71 | 133 | 205 | 266 | 1.02e-14 | 72.4 |
MS.gene33412.t1 | AT3G58710 | 41.667 | 84 | 42 | 2 | 62 | 144 | 62 | 139 | 2.38e-14 | 70.9 |
MS.gene33412.t1 | AT3G58710 | 41.667 | 84 | 42 | 2 | 62 | 144 | 61 | 138 | 2.45e-14 | 70.9 |
MS.gene33412.t1 | AT5G45050 | 44.186 | 86 | 34 | 3 | 55 | 133 | 1137 | 1215 | 1.75e-13 | 69.7 |
MS.gene33412.t1 | AT5G45050 | 44.186 | 86 | 34 | 3 | 55 | 133 | 1165 | 1243 | 1.75e-13 | 69.7 |
MS.gene33412.t1 | AT5G45050 | 44.186 | 86 | 34 | 3 | 55 | 133 | 1026 | 1104 | 1.83e-13 | 69.7 |
MS.gene33412.t1 | AT5G24110 | 31.206 | 141 | 90 | 4 | 58 | 192 | 99 | 238 | 1.02e-11 | 63.5 |
MS.gene33412.t1 | AT2G46400 | 37.662 | 77 | 45 | 1 | 52 | 125 | 85 | 161 | 4.95e-11 | 61.6 |
Find 35 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGGCTTCTGATCTTTCTT+TGG | 0.174215 | 4.2:-87318586 | MS.gene33412:CDS |
TGGAGGAGATTATGATGATT+TGG | 0.259847 | 4.2:-87318523 | MS.gene33412:CDS |
GGAGGAGATTATGATGATTT+GGG | 0.288731 | 4.2:-87318522 | MS.gene33412:CDS |
ATGGCTTCTGATCTTTCTTT+GGG | 0.307243 | 4.2:-87318585 | MS.gene33412:CDS |
TTATTTGCATACCTTGGGTT+TGG | 0.317158 | 4.2:+87318104 | None:intergenic |
GGATATAGGTGGAGGAAATA+TGG | 0.321679 | 4.2:-87318149 | MS.gene33412:CDS |
TATGGACAGAAAGTAGTTAA+AGG | 0.332389 | 4.2:-87318131 | MS.gene33412:CDS |
GTCACTGCTGAAGGCCTTAT+AGG | 0.353697 | 4.2:+87317659 | None:intergenic |
TTCTGATCTTTCTTTGGGAG+AGG | 0.403118 | 4.2:-87318580 | MS.gene33412:CDS |
AGCCGAGTATTGTTCCGAAT+TGG | 0.406866 | 4.2:+87317499 | None:intergenic |
ATATTCTTGATGATGGATAT+AGG | 0.416334 | 4.2:-87318163 | MS.gene33412:CDS |
AATTGGTTCAAATACCAATT+CGG | 0.428619 | 4.2:-87317513 | MS.gene33412:CDS |
CATGTAATGTTACACCTATA+AGG | 0.432770 | 4.2:-87317673 | MS.gene33412:CDS |
TTATGATGATTTGGGAATAG+AGG | 0.442880 | 4.2:-87318514 | MS.gene33412:CDS |
GCAGTAATCACAACATATGA+AGG | 0.450008 | 4.2:-87317776 | MS.gene33412:CDS |
GAAATTGATATTCTTGATGA+TGG | 0.452886 | 4.2:-87318170 | MS.gene33412:CDS |
AGAAGGGTGTAGAACTGTTA+AGG | 0.478856 | 4.2:-87318222 | MS.gene33412:CDS |
GTACTGATCTTACCATCTCT+TGG | 0.498802 | 4.2:+87318491 | None:intergenic |
GTAGTTTGAACCACAACTCT+AGG | 0.508298 | 4.2:+87318197 | None:intergenic |
TACCAATTCGGAACAATACT+CGG | 0.514905 | 4.2:-87317501 | MS.gene33412:CDS |
AGCTATTCTTATTCCACAGA+AGG | 0.516161 | 4.2:-87318239 | MS.gene33412:CDS |
CTCTTCCTAGAGGTACATCA+TGG | 0.532042 | 4.2:+87317744 | None:intergenic |
GAATAGTTAGTCACTGCTGA+AGG | 0.564525 | 4.2:+87317650 | None:intergenic |
CATGATGTACCTCTAGGAAG+AGG | 0.569832 | 4.2:-87317743 | MS.gene33412:CDS |
TTGATGATGGATATAGGTGG+AGG | 0.585484 | 4.2:-87318157 | MS.gene33412:CDS |
AACAGTTCTACACCCTTCTG+TGG | 0.594037 | 4.2:+87318226 | None:intergenic |
TACTACAAATGTGTAATCCA+AGG | 0.596332 | 4.2:-87317845 | MS.gene33412:CDS |
CATAACCATGATGTACCTCT+AGG | 0.598674 | 4.2:-87317749 | MS.gene33412:CDS |
GCTATTCTTATTCCACAGAA+GGG | 0.600897 | 4.2:-87318238 | MS.gene33412:CDS |
CAGTAATCACAACATATGAA+GGG | 0.624707 | 4.2:-87317775 | MS.gene33412:CDS |
TTAAAGGAAATCCAAACCCA+AGG | 0.636841 | 4.2:-87318115 | MS.gene33412:intron |
TGTTAAGGAACCTAGAGTTG+TGG | 0.637272 | 4.2:-87318207 | MS.gene33412:CDS |
CTTGAAATTCCTCTTCCTAG+AGG | 0.637467 | 4.2:+87317734 | None:intergenic |
TGGGAATAGAGGCCAAGAGA+TGG | 0.640179 | 4.2:-87318503 | MS.gene33412:intron |
TTCTTGATGATGGATATAGG+TGG | 0.671599 | 4.2:-87318160 | MS.gene33412:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATATTCATTCAATAAA+TGG | - | chr4.2:87317605-87317624 | MS.gene33412:CDS | 10.0% |
!! | CTAAATGATATAATATACTA+CGG | - | chr4.2:87318013-87318032 | MS.gene33412:intron | 15.0% |
!! | TATCTATAACTATAACTAAA+TGG | + | chr4.2:87317986-87318005 | None:intergenic | 15.0% |
!! | GAACAAGTTATTATCATATA+GGG | + | chr4.2:87318152-87318171 | None:intergenic | 20.0% |
!! | TATGCAAATAATACAACTTA+TGG | - | chr4.2:87317947-87317966 | MS.gene33412:intron | 20.0% |
!! | TGAACAAGTTATTATCATAT+AGG | + | chr4.2:87318153-87318172 | None:intergenic | 20.0% |
!! | TTTATGATTCTCATTATTGT+AGG | - | chr4.2:87317756-87317775 | MS.gene33412:CDS | 20.0% |
!!! | AAACGACTATTATTTTTAGA+CGG | - | chr4.2:87318085-87318104 | MS.gene33412:intron | 20.0% |
! | AAGTTATTATCATATAGGGT+TGG | + | chr4.2:87318148-87318167 | None:intergenic | 25.0% |
! | CATTCAATAAATGGTATATG+TGG | - | chr4.2:87317614-87317633 | MS.gene33412:CDS | 25.0% |
! | GAAATCAACCTCAAAAATAT+TGG | + | chr4.2:87317725-87317744 | None:intergenic | 25.0% |
! | GAAATTGATATTCTTGATGA+TGG | - | chr4.2:87317869-87317888 | MS.gene33412:intron | 25.0% |
! | TTGTATTATTTGCATACCTT+GGG | + | chr4.2:87317943-87317962 | None:intergenic | 25.0% |
!! | AATTGGTTCAAATACCAATT+CGG | - | chr4.2:87318526-87318545 | MS.gene33412:CDS | 25.0% |
!!! | ATATTCTTGATGATGGATAT+AGG | - | chr4.2:87317876-87317895 | MS.gene33412:intron | 25.0% |
!!! | ATGAAGTACCAATATTTTTG+AGG | - | chr4.2:87317714-87317733 | MS.gene33412:CDS | 25.0% |
CAGTAATCACAACATATGAA+GGG | - | chr4.2:87318264-87318283 | MS.gene33412:CDS | 30.0% | |
CATGTAATGTTACACCTATA+AGG | - | chr4.2:87318366-87318385 | MS.gene33412:intron | 30.0% | |
GATTCTCATTATTGTAGGAA+AGG | - | chr4.2:87317761-87317780 | MS.gene33412:CDS | 30.0% | |
GTTGTATTATTTGCATACCT+TGG | + | chr4.2:87317944-87317963 | None:intergenic | 30.0% | |
TACTACAAATGTGTAATCCA+AGG | - | chr4.2:87318194-87318213 | MS.gene33412:CDS | 30.0% | |
TATGGACAGAAAGTAGTTAA+AGG | - | chr4.2:87317908-87317927 | MS.gene33412:intron | 30.0% | |
! | TTATGATGATTTGGGAATAG+AGG | - | chr4.2:87317525-87317544 | MS.gene33412:CDS | 30.0% |
!! | GATGAATTCTAGAAGCTTTT+TGG | - | chr4.2:87318496-87318515 | MS.gene33412:intron | 30.0% |
!! | GTTCAAAATATTGTTTCTGC+AGG | - | chr4.2:87318168-87318187 | MS.gene33412:CDS | 30.0% |
!!! | ACATCACAAACTAGTTTTTC+TGG | - | chr4.2:87317496-87317515 | MS.gene33412:CDS | 30.0% |
!!! | GACTATTATTTTTAGACGGA+AGG | - | chr4.2:87318089-87318108 | MS.gene33412:intron | 30.0% |
AGCTATTCTTATTCCACAGA+AGG | - | chr4.2:87317800-87317819 | MS.gene33412:CDS | 35.0% | |
ATGGCTTCTGATCTTTCTTT+GGG | - | chr4.2:87317454-87317473 | MS.gene33412:CDS | 35.0% | |
GCACAAAATAATACACCCTT+CGG | + | chr4.2:87317677-87317696 | None:intergenic | 35.0% | |
GCAGTAATCACAACATATGA+AGG | - | chr4.2:87318263-87318282 | MS.gene33412:CDS | 35.0% | |
GCTATTCTTATTCCACAGAA+GGG | - | chr4.2:87317801-87317820 | MS.gene33412:CDS | 35.0% | |
GGAGGAGATTATGATGATTT+GGG | - | chr4.2:87317517-87317536 | MS.gene33412:CDS | 35.0% | |
GGTCACTATTATAAACCAGA+GGG | + | chr4.2:87317656-87317675 | None:intergenic | 35.0% | |
GGTTTATAATAGTGACCGAA+GGG | - | chr4.2:87317659-87317678 | MS.gene33412:CDS | 35.0% | |
TACCAATTCGGAACAATACT+CGG | - | chr4.2:87318538-87318557 | MS.gene33412:CDS | 35.0% | |
TGCTTATAATAGTGACCAGA+GGG | + | chr4.2:87317575-87317594 | None:intergenic | 35.0% | |
TGGAGGAGATTATGATGATT+TGG | - | chr4.2:87317516-87317535 | MS.gene33412:CDS | 35.0% | |
TGGTTTATAATAGTGACCGA+AGG | - | chr4.2:87317658-87317677 | MS.gene33412:CDS | 35.0% | |
TTAAAGGAAATCCAAACCCA+AGG | - | chr4.2:87317924-87317943 | MS.gene33412:intron | 35.0% | |
TTATTTGCATACCTTGGGTT+TGG | + | chr4.2:87317938-87317957 | None:intergenic | 35.0% | |
TTGCTTATAATAGTGACCAG+AGG | + | chr4.2:87317576-87317595 | None:intergenic | 35.0% | |
! | AGCTTTTTGGACAGATCAAT+TGG | - | chr4.2:87318509-87318528 | MS.gene33412:CDS | 35.0% |
!! | TTCTTGATGATGGATATAGG+TGG | - | chr4.2:87317879-87317898 | MS.gene33412:intron | 35.0% |
!!! | TCACAAACTAGTTTTTCTGG+AGG | - | chr4.2:87317499-87317518 | MS.gene33412:CDS | 35.0% |
CACTATTATAAACCAGAGGG+TGG | + | chr4.2:87317653-87317672 | None:intergenic | 40.0% | |
CATAACCATGATGTACCTCT+AGG | - | chr4.2:87318290-87318309 | MS.gene33412:intron | 40.0% | |
CGGTCACTATTATAAACCAG+AGG | + | chr4.2:87317657-87317676 | None:intergenic | 40.0% | |
CTTGAAATTCCTCTTCCTAG+AGG | + | chr4.2:87318308-87318327 | None:intergenic | 40.0% | |
GAATAGTTAGTCACTGCTGA+AGG | + | chr4.2:87318392-87318411 | None:intergenic | 40.0% | |
GGATATAGGTGGAGGAAATA+TGG | - | chr4.2:87317890-87317909 | MS.gene33412:intron | 40.0% | |
GTAGTTTGAACCACAACTCT+AGG | + | chr4.2:87317845-87317864 | None:intergenic | 40.0% | |
TGTTAAGGAACCTAGAGTTG+TGG | - | chr4.2:87317832-87317851 | MS.gene33412:CDS | 40.0% | |
TTATAATGTAGACCACCCTC+TGG | - | chr4.2:87317638-87317657 | MS.gene33412:CDS | 40.0% | |
! | AGAAGGGTGTAGAACTGTTA+AGG | - | chr4.2:87317817-87317836 | MS.gene33412:CDS | 40.0% |
! | GTACTGATCTTACCATCTCT+TGG | + | chr4.2:87317551-87317570 | None:intergenic | 40.0% |
! | GTTTTCTCACAGTACAACCT+TGG | + | chr4.2:87318214-87318233 | None:intergenic | 40.0% |
! | TTCTGATCTTTCTTTGGGAG+AGG | - | chr4.2:87317459-87317478 | MS.gene33412:CDS | 40.0% |
!! | ACGGAAGGAGTACTTAACTT+CGG | - | chr4.2:87318104-87318123 | MS.gene33412:intron | 40.0% |
!! | TTGATGATGGATATAGGTGG+AGG | - | chr4.2:87317882-87317901 | MS.gene33412:intron | 40.0% |
AACAGTTCTACACCCTTCTG+TGG | + | chr4.2:87317816-87317835 | None:intergenic | 45.0% | |
! | AGCCGAGTATTGTTCCGAAT+TGG | + | chr4.2:87318543-87318562 | None:intergenic | 45.0% |
! | CATGATGTACCTCTAGGAAG+AGG | - | chr4.2:87318296-87318315 | MS.gene33412:intron | 45.0% |
! | CTCTTCCTAGAGGTACATCA+TGG | + | chr4.2:87318298-87318317 | None:intergenic | 45.0% |
TGGGAATAGAGGCCAAGAGA+TGG | - | chr4.2:87317536-87317555 | MS.gene33412:CDS | 50.0% | |
! | GTCACTGCTGAAGGCCTTAT+AGG | + | chr4.2:87318383-87318402 | None:intergenic | 50.0% |
GGTAAGATCAGTACGCCCTC+TGG | - | chr4.2:87317557-87317576 | MS.gene33412:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 87317454 | 87318607 | 87317454 | ID=MS.gene33412 |
chr4.2 | mRNA | 87317454 | 87318607 | 87317454 | ID=MS.gene33412.t1;Parent=MS.gene33412 |
chr4.2 | exon | 87318504 | 87318607 | 87318504 | ID=MS.gene33412.t1.exon1;Parent=MS.gene33412.t1 |
chr4.2 | CDS | 87318504 | 87318607 | 87318504 | ID=cds.MS.gene33412.t1;Parent=MS.gene33412.t1 |
chr4.2 | exon | 87318116 | 87318283 | 87318116 | ID=MS.gene33412.t1.exon2;Parent=MS.gene33412.t1 |
chr4.2 | CDS | 87318116 | 87318283 | 87318116 | ID=cds.MS.gene33412.t1;Parent=MS.gene33412.t1 |
chr4.2 | exon | 87317454 | 87317871 | 87317454 | ID=MS.gene33412.t1.exon3;Parent=MS.gene33412.t1 |
chr4.2 | CDS | 87317454 | 87317871 | 87317454 | ID=cds.MS.gene33412.t1;Parent=MS.gene33412.t1 |
Gene Sequence |
Protein sequence |