Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34352.t1 | XP_013450730.1 | 64.9 | 550 | 28 | 5 | 1 | 386 | 1 | 549 | 3.20E-160 | 574.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34352.t1 | Q9RB36 | 49.2 | 193 | 89 | 2 | 201 | 386 | 20 | 210 | 5.0e-45 | 183.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34352.t1 | A0A072U4X6 | 64.9 | 550 | 28 | 5 | 1 | 386 | 1 | 549 | 2.3e-160 | 574.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene34352 | 0.801762 | 7.73E-49 | -1.69E-46 |
| MS.gene049297 | MS.gene34352 | 0.825579 | 4.34E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene34352 | 0.865341 | 6.33E-65 | -1.69E-46 |
| MS.gene050516 | MS.gene34352 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene050558 | MS.gene34352 | 0.839774 | 1.30E-57 | -1.69E-46 |
| MS.gene050560 | MS.gene34352 | 0.829364 | 5.37E-55 | -1.69E-46 |
| MS.gene051663 | MS.gene34352 | 0.819621 | 1.06E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene34352 | 0.835359 | 1.76E-56 | -1.69E-46 |
| MS.gene052207 | MS.gene34352 | 0.842715 | 2.18E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene34352 | 0.848192 | 7.17E-60 | -1.69E-46 |
| MS.gene054123 | MS.gene34352 | 0.801797 | 7.60E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene34352 | 0.841831 | 3.74E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene34352 | 0.81559 | 8.55E-52 | -1.69E-46 |
| MS.gene054942 | MS.gene34352 | 0.836652 | 8.25E-57 | -1.69E-46 |
| MS.gene055390 | MS.gene34352 | 0.849016 | 4.24E-60 | -1.69E-46 |
| MS.gene055422 | MS.gene34352 | 0.826493 | 2.63E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene34352 | 0.811878 | 5.62E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene34352 | 0.834378 | 3.10E-56 | -1.69E-46 |
| MS.gene056875 | MS.gene34352 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene34352 | 0.806757 | 7.04E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene34352 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene056933 | MS.gene34352 | 0.811095 | 8.31E-51 | -1.69E-46 |
| MS.gene057121 | MS.gene34352 | 0.840928 | 6.47E-58 | -1.69E-46 |
| MS.gene057245 | MS.gene34352 | 0.812164 | 4.87E-51 | -1.69E-46 |
| MS.gene057469 | MS.gene34352 | 0.871156 | 8.47E-67 | -1.69E-46 |
| MS.gene058002 | MS.gene34352 | 0.842767 | 2.11E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene34352 | 0.809975 | 1.45E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene34352 | 0.808419 | 3.13E-50 | -1.69E-46 |
| MS.gene058739 | MS.gene34352 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene34352 | 0.817047 | 4.04E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene34352 | 0.804046 | 2.61E-49 | -1.69E-46 |
| MS.gene060314 | MS.gene34352 | 0.803031 | 4.23E-49 | -1.69E-46 |
| MS.gene060559 | MS.gene34352 | 0.829744 | 4.34E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34352.t1 | MTR_6g004400 | 99.465 | 187 | 1 | 0 | 200 | 386 | 363 | 549 | 1.34e-132 | 392 |
| MS.gene34352.t1 | MTR_6g004400 | 78.222 | 225 | 43 | 5 | 1 | 223 | 1 | 221 | 1.73e-112 | 340 |
| MS.gene34352.t1 | MTR_6g004400 | 78.222 | 225 | 43 | 5 | 1 | 223 | 1 | 221 | 1.45e-114 | 341 |
| MS.gene34352.t1 | MTR_6g004400 | 100.000 | 74 | 0 | 0 | 200 | 273 | 363 | 436 | 2.54e-44 | 159 |
| MS.gene34352.t1 | MTR_4g074160 | 30.366 | 191 | 99 | 5 | 193 | 383 | 90 | 246 | 1.32e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34352.t1 | AT5G14460 | 91.444 | 187 | 16 | 0 | 200 | 386 | 331 | 517 | 1.82e-121 | 362 |
| MS.gene34352.t1 | AT5G14460 | 47.849 | 186 | 80 | 5 | 1 | 174 | 11 | 191 | 2.42e-44 | 161 |
| MS.gene34352.t1 | AT3G57150 | 32.973 | 185 | 90 | 5 | 199 | 383 | 89 | 239 | 1.06e-17 | 85.1 |
Find 107 sgRNAs with CRISPR-Local
Find 420 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATCACTCTGTGCGGATTT+TGG | 0.099638 | 6.3:-545427 | MS.gene34352:CDS |
| ATACTTAATAGTGTTTCTTT+TGG | 0.272482 | 6.3:-548723 | MS.gene34352:CDS |
| TCGCCTTGTCAAAGTGAAAA+AGG | 0.292477 | 6.3:-548621 | MS.gene34352:intron |
| TTAGCGGTTCGAGTGGGTTT+GGG | 0.298631 | 6.3:+550797 | None:intergenic |
| TCGAGTGGGTTTGGGGAGAT+TGG | 0.300053 | 6.3:+550805 | None:intergenic |
| GAAAGATAAGCATTATAAAA+TGG | 0.301531 | 6.3:-550468 | MS.gene34352:CDS |
| TTTAGCGGTTCGAGTGGGTT+TGG | 0.343333 | 6.3:+550796 | None:intergenic |
| CGAGTGGGTTTGGGGAGATT+GGG | 0.352164 | 6.3:+550806 | None:intergenic |
| AAGAGGTTGTTGTTAGGAAA+TGG | 0.356970 | 6.3:+550912 | None:intergenic |
| AAAACTCCTCCCTCCAATCC+TGG | 0.362557 | 6.3:-550754 | MS.gene34352:CDS |
| AGCTACGCTCTATGTCAAAT+TGG | 0.367629 | 6.3:+546382 | None:intergenic |
| GTCCTCAACTCCACAGCTTC+CGG | 0.387973 | 6.3:+550548 | None:intergenic |
| CGTTGGCAAGTCAACAAAAC+TGG | 0.388637 | 6.3:-548474 | MS.gene34352:CDS |
| ATCTGGAAGAGGTTGTTGTT+AGG | 0.388752 | 6.3:+550906 | None:intergenic |
| GGAGAATGGGTTGAAGAATC+TGG | 0.390566 | 6.3:+550889 | None:intergenic |
| GAACCGGGTCGGTTTAATTC+CGG | 0.390958 | 6.3:+550707 | None:intergenic |
| TGGACTTCATTCACAGTTTG+TGG | 0.401629 | 6.3:-548653 | MS.gene34352:CDS |
| TTGAAGTGGGTATGGGGTTG+TGG | 0.412328 | 6.3:+550850 | None:intergenic |
| AAGAGGAGGAAGAGAATGTA+TGG | 0.412854 | 6.3:-550626 | MS.gene34352:CDS |
| AGATATCAAGGGATGGTTAA+GGG | 0.418833 | 6.3:-548303 | MS.gene34352:CDS |
| CGATAAATTAACCACTGAAC+CGG | 0.422132 | 6.3:-550726 | MS.gene34352:CDS |
| TTAGAGTGACTTGTTCTAAA+GGG | 0.422161 | 6.3:-545459 | MS.gene34352:CDS |
| TGGGTTAGAGATACAGATAT+TGG | 0.425385 | 6.3:+550941 | None:intergenic |
| AGGAAACGGAGAGTGGAGAA+TGG | 0.425542 | 6.3:+550875 | None:intergenic |
| CAGATATCAAGGGATGGTTA+AGG | 0.429332 | 6.3:-548304 | MS.gene34352:CDS |
| AGTTCGTATTGAAGTGGGTA+TGG | 0.438260 | 6.3:+550842 | None:intergenic |
| ATGGGGTTGTGGAGAGGAAA+CGG | 0.438870 | 6.3:+550861 | None:intergenic |
| ACTTACCAATTGAATCTCTT+CGG | 0.441065 | 6.3:+545260 | None:intergenic |
| TCGTCGTAACGAGGAACAAT+TGG | 0.452320 | 6.3:-550582 | MS.gene34352:CDS |
| GGAAACGGAGAGTGGAGAAT+GGG | 0.454803 | 6.3:+550876 | None:intergenic |
| AGCCATTGGATCAAGAGTTC+CGG | 0.455220 | 6.3:+548517 | None:intergenic |
| ATTTATCGTTGGCCCAGGAT+TGG | 0.458959 | 6.3:+550741 | None:intergenic |
| AGTTGAGGACTTTGCATAAG+AGG | 0.461084 | 6.3:-550535 | MS.gene34352:CDS |
| ACTCTTGATCCAATGGCTAC+TGG | 0.468893 | 6.3:-548512 | MS.gene34352:CDS |
| TTTAGAGTGACTTGTTCTAA+AGG | 0.482622 | 6.3:-545460 | MS.gene34352:CDS |
| TTCAGTGGTTAATTTATCGT+TGG | 0.484449 | 6.3:+550730 | None:intergenic |
| GTTCGTATTGAAGTGGGTAT+GGG | 0.488833 | 6.3:+550843 | None:intergenic |
| TGGAAGATTGAAATTCGTCT+TGG | 0.489018 | 6.3:+546402 | None:intergenic |
| GGGATGGTTAAGGGTTATAG+TGG | 0.489732 | 6.3:-548294 | MS.gene34352:CDS |
| TCGTCTTTGATGTGCTCCCA+TGG | 0.493556 | 6.3:+546841 | None:intergenic |
| ATCAATAAACCAGTAGCCAT+TGG | 0.493847 | 6.3:+548503 | None:intergenic |
| TTGCCAAATCTCCCCACAAA+AGG | 0.497675 | 6.3:+546795 | None:intergenic |
| TGGGGTTGGTTCGCGTTTAG+CGG | 0.502102 | 6.3:+550781 | None:intergenic |
| AAAAGTTGTATGAGAAAGCA+AGG | 0.502196 | 6.3:-546449 | MS.gene34352:CDS |
| TAGAGCGTAGCTTGGATGAC+AGG | 0.504180 | 6.3:-546371 | MS.gene34352:intron |
| TATTTACAGGTTGGGCATGC+CGG | 0.506776 | 6.3:-548536 | MS.gene34352:intron |
| GGTCATTCAGCGTGAGCCAT+GGG | 0.508339 | 6.3:-546857 | MS.gene34352:CDS |
| TATCGTTGGCCCAGGATTGG+AGG | 0.513364 | 6.3:+550744 | None:intergenic |
| AATCTCTTCGGAGAGCCGTT+AGG | 0.515298 | 6.3:+545272 | None:intergenic |
| TGTATGAGAAAGCAAGGAGA+GGG | 0.517131 | 6.3:-546443 | MS.gene34352:CDS |
| TGTGGAGAGGAAACGGAGAG+TGG | 0.518712 | 6.3:+550868 | None:intergenic |
| CTCTTCGGAGAGCCGTTAGG+TGG | 0.519359 | 6.3:+545275 | None:intergenic |
| ATTTGACATAGAGCGTAGCT+TGG | 0.526109 | 6.3:-546379 | MS.gene34352:CDS |
| TCGGTTTAATTCCGGTTCAG+TGG | 0.528374 | 6.3:+550715 | None:intergenic |
| ATTAAGTGTGAATTTGTGGC+AGG | 0.530136 | 6.3:-548677 | MS.gene34352:CDS |
| TTATAAAATGGTGTATCAGT+TGG | 0.530647 | 6.3:-550456 | MS.gene34352:CDS |
| TAATGCTTATCTTTCTCCCA+AGG | 0.531868 | 6.3:+550476 | None:intergenic |
| TTGTTAGGAAATGGAGATGG+TGG | 0.532437 | 6.3:+550921 | None:intergenic |
| AAACTCCTCCCTCCAATCCT+GGG | 0.533078 | 6.3:-550753 | MS.gene34352:CDS |
| TGGGTTTGGGGAGATTGGGA+CGG | 0.536973 | 6.3:+550810 | None:intergenic |
| AGGGGAGGCTACTTCAACAT+GGG | 0.540342 | 6.3:-548259 | MS.gene34352:CDS |
| AGTCAACAAAACTGGTGGAC+AGG | 0.543352 | 6.3:-548466 | MS.gene34352:intron |
| TGGGTTGAAGAATCTGGAAG+AGG | 0.545479 | 6.3:+550895 | None:intergenic |
| TAGCGGTTCGAGTGGGTTTG+GGG | 0.545535 | 6.3:+550798 | None:intergenic |
| ATCGTTGGCCCAGGATTGGA+GGG | 0.545981 | 6.3:+550745 | None:intergenic |
| GGTTAATTTATCGTTGGCCC+AGG | 0.546253 | 6.3:+550736 | None:intergenic |
| TGCCGGAACTCTTGATCCAA+TGG | 0.547199 | 6.3:-548519 | MS.gene34352:CDS |
| GGTTTATTGATTGTTTGCGT+TGG | 0.547808 | 6.3:-548491 | MS.gene34352:CDS |
| GGATGGTTAAGGGTTATAGT+GGG | 0.548141 | 6.3:-548293 | MS.gene34352:CDS |
| GCTCTCCGAAGAGATTCAAT+TGG | 0.548644 | 6.3:-545265 | None:intergenic |
| GTTGAGGACTTTGCATAAGA+GGG | 0.560674 | 6.3:-550534 | MS.gene34352:CDS |
| TCGTAACGAGGAACAATTGG+TGG | 0.561729 | 6.3:-550579 | MS.gene34352:CDS |
| TTCGTATTGAAGTGGGTATG+GGG | 0.564569 | 6.3:+550844 | None:intergenic |
| GACTTTGCATAAGAGGGAAG+AGG | 0.565594 | 6.3:-550528 | MS.gene34352:CDS |
| TTGTAGTTGCGCCCACCTAA+CGG | 0.568022 | 6.3:-545287 | MS.gene34352:intron |
| ACTTTAATAGCAGAGAACAT+AGG | 0.569137 | 6.3:+546766 | None:intergenic |
| TACCGGAAGCTGTGGAGTTG+AGG | 0.570943 | 6.3:-550550 | MS.gene34352:CDS |
| TGTTAGGAAATGGAGATGGT+GGG | 0.579033 | 6.3:+550922 | None:intergenic |
| GTGGGTATGGGGTTGTGGAG+AGG | 0.579761 | 6.3:+550855 | None:intergenic |
| AGGTCATTCAGCGTGAGCCA+TGG | 0.580500 | 6.3:-546858 | MS.gene34352:CDS |
| ACAATTGGTGGAGATGATAC+CGG | 0.583536 | 6.3:-550567 | MS.gene34352:CDS |
| TCGCGTTTAGCGGTTCGAGT+GGG | 0.588228 | 6.3:+550791 | None:intergenic |
| GTATGAGAAAGCAAGGAGAG+GGG | 0.588760 | 6.3:-546442 | MS.gene34352:CDS |
| TAGGGGAGGCTACTTCAACA+TGG | 0.596980 | 6.3:-548260 | MS.gene34352:CDS |
| AGTGTGAATTTGTGGCAGGT+TGG | 0.597114 | 6.3:-548673 | MS.gene34352:CDS |
| GAAAATACTATAACAAGAGG+AGG | 0.597987 | 6.3:-550640 | MS.gene34352:CDS |
| AGAGAAAATACTATAACAAG+AGG | 0.602328 | 6.3:-550643 | MS.gene34352:CDS |
| ATGATGAGTTCGTATTGAAG+TGG | 0.605295 | 6.3:+550836 | None:intergenic |
| ATGCTTCAGATATCAAGGGA+TGG | 0.611716 | 6.3:-548310 | MS.gene34352:intron |
| TCTTCGGAGAGCCGTTAGGT+GGG | 0.612060 | 6.3:+545276 | None:intergenic |
| TTCGCGTTTAGCGGTTCGAG+TGG | 0.615988 | 6.3:+550790 | None:intergenic |
| TGATGAGTTCGTATTGAAGT+GGG | 0.621031 | 6.3:+550837 | None:intergenic |
| GATGGTTAAGGGTTATAGTG+GGG | 0.629063 | 6.3:-548292 | MS.gene34352:CDS |
| TGGCAAGTCAACAAAACTGG+TGG | 0.632066 | 6.3:-548471 | MS.gene34352:CDS |
| TTGTATGAGAAAGCAAGGAG+AGG | 0.634679 | 6.3:-546444 | MS.gene34352:CDS |
| TTGAAGTAGCCTCCCCTAAG+CGG | 0.636178 | 6.3:+548265 | None:intergenic |
| GGAGATGATACCGGAAGCTG+TGG | 0.636518 | 6.3:-550558 | MS.gene34352:CDS |
| TGATGATCATCGTCGTAACG+AGG | 0.638024 | 6.3:-550591 | MS.gene34352:CDS |
| AGAGGAGGAAGAGAATGTAT+GGG | 0.662464 | 6.3:-550625 | MS.gene34352:CDS |
| GTTACGACGATGATCATCAT+CGG | 0.663156 | 6.3:+550595 | None:intergenic |
| TTAATAGCAGAGAACATAGG+TGG | 0.666040 | 6.3:+546769 | None:intergenic |
| TTGTTGTTAGGAAATGGAGA+TGG | 0.672758 | 6.3:+550918 | None:intergenic |
| GAACCGGAATTAAACCGACC+CGG | 0.676094 | 6.3:-550710 | MS.gene34352:CDS |
| GTTGGCCCAGGATTGGAGGG+AGG | 0.700888 | 6.3:+550748 | None:intergenic |
| AATCTCCCCACAAAAGGACA+AGG | 0.707724 | 6.3:+546801 | None:intergenic |
| ATGGGAGCACATCAAAGACG+AGG | 0.727299 | 6.3:-546839 | MS.gene34352:CDS |
| ATATATTCGATCACTCTGTG+CGG | 0.736006 | 6.3:-545434 | MS.gene34352:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | + | chr6.3:548198-548179 | None:intergenic | 0.0% |
| !! | ATAATTTATTAATCCATTAA+AGG | - | chr6.3:548435-548454 | MS.gene34352:intron | 10.0% |
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr6.3:547029-547048 | MS.gene34352:intron | 10.0% |
| !!! | GAATTTTTACAAAAAAATAT+TGG | - | chr6.3:548767-548786 | MS.gene34352:intron | 10.0% |
| !!! | TATTTAATATATGCAAATTT+TGG | - | chr6.3:547203-547222 | MS.gene34352:intron | 10.0% |
| !!! | TTAAAGTATTAATTATTTAC+AGG | - | chr6.3:547667-547686 | MS.gene34352:intron | 10.0% |
| !!! | TTTAATTAAAATTTTTGATC+TGG | - | chr6.3:547851-547870 | MS.gene34352:intron | 10.0% |
| !!! | TTTCAAACATAATTTTTATA+AGG | + | chr6.3:550654-550673 | None:intergenic | 10.0% |
| !! | AAAGTATAACAAATAAATCA+GGG | + | chr6.3:550717-550736 | None:intergenic | 15.0% |
| !! | ATAAATTATCTTTGACAAAA+TGG | + | chr6.3:548424-548443 | None:intergenic | 15.0% |
| !! | ATATAAAATAATAATGATGG+TGG | - | chr6.3:549972-549991 | MS.gene34352:intron | 15.0% |
| !! | ATTAATATGATTTGATGTTT+GGG | - | chr6.3:549057-549076 | MS.gene34352:intron | 15.0% |
| !! | CAATTTCAATATATTGAAAT+TGG | - | chr6.3:549131-549150 | MS.gene34352:intron | 15.0% |
| !! | TATAAAATAATAATGATGGT+GGG | - | chr6.3:549973-549992 | MS.gene34352:intron | 15.0% |
| !! | TATCATATTAATAAACACAT+AGG | + | chr6.3:549022-549041 | None:intergenic | 15.0% |
| !! | TATTAATATGATTTGATGTT+TGG | - | chr6.3:549056-549075 | MS.gene34352:intron | 15.0% |
| !! | TTTCTACCATTTAATTATTT+AGG | + | chr6.3:550152-550171 | None:intergenic | 15.0% |
| !!! | AAAAGTATAACAAATAAATC+AGG | + | chr6.3:550718-550737 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr6.3:547133-547152 | MS.gene34352:intron | 15.0% |
| !!! | TATATATTTTTTCAAACTAG+TGG | + | chr6.3:549957-549976 | None:intergenic | 15.0% |
| !!! | TTGATTTTAACTTCTATTAA+TGG | + | chr6.3:549932-549951 | None:intergenic | 15.0% |
| !! | AAAAATTAAGTGTGAATTTG+TGG | - | chr6.3:547535-547554 | MS.gene34352:intron | 20.0% |
| !! | AAAATTAAATGGTTCAAGAA+TGG | + | chr6.3:549487-549506 | None:intergenic | 20.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr6.3:546995-547014 | MS.gene34352:intron | 20.0% |
| !! | AAGTTTATGTAATAAAGATG+GGG | - | chr6.3:550330-550349 | MS.gene34352:intron | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr6.3:546996-547015 | None:intergenic | 20.0% |
| !! | ACAAGTTTATGTAATAAAGA+TGG | - | chr6.3:550328-550347 | MS.gene34352:intron | 20.0% |
| !! | ACGAAACTATGAAAATTAAA+TGG | + | chr6.3:549498-549517 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr6.3:547093-547112 | MS.gene34352:intron | 20.0% |
| !! | AGTATTAATTATTTACAGGT+TGG | - | chr6.3:547671-547690 | MS.gene34352:intron | 20.0% |
| !! | CAACATTATGTTCTTAAATA+TGG | - | chr6.3:547461-547480 | MS.gene34352:intron | 20.0% |
| !! | CAAGTTTATGTAATAAAGAT+GGG | - | chr6.3:550329-550348 | MS.gene34352:intron | 20.0% |
| !! | CACATTATATAATTAGCTAT+TGG | - | chr6.3:548031-548050 | MS.gene34352:intron | 20.0% |
| !! | CATACACAAGTATTATTTAT+TGG | - | chr6.3:549178-549197 | MS.gene34352:intron | 20.0% |
| !! | GAAAGATAAGCATTATAAAA+TGG | - | chr6.3:545748-545767 | MS.gene34352:intron | 20.0% |
| !! | GTATTAATTATTTACAGGTT+GGG | - | chr6.3:547672-547691 | MS.gene34352:intron | 20.0% |
| !! | TCATGTCCTAAATAATTAAA+TGG | - | chr6.3:550143-550162 | MS.gene34352:intron | 20.0% |
| !! | TTATATAATTAGCTATTGGT+TGG | - | chr6.3:548035-548054 | MS.gene34352:intron | 20.0% |
| !!! | AAATCTTTGTTTTTTTTGTG+TGG | - | chr6.3:547401-547420 | MS.gene34352:intron | 20.0% |
| !!! | AAGAAAAATGTTGATTACAT+AGG | + | chr6.3:549622-549641 | None:intergenic | 20.0% |
| !!! | ACACTTAATTTTTACTTTCA+TGG | + | chr6.3:547528-547547 | None:intergenic | 20.0% |
| !!! | ATACTTAATAGTGTTTCTTT+TGG | - | chr6.3:547493-547512 | MS.gene34352:intron | 20.0% |
| !!! | TAAATATGTCATTTCAGAAA+TGG | - | chr6.3:549567-549586 | MS.gene34352:intron | 20.0% |
| !!! | TACTTAATAGTGTTTCTTTT+GGG | - | chr6.3:547494-547513 | MS.gene34352:intron | 20.0% |
| !!! | TCTAAAAATCAAATTTTGTC+TGG | + | chr6.3:550742-550761 | None:intergenic | 20.0% |
| ! | AAACAAAAACTGTACTATAG+TGG | + | chr6.3:547833-547852 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr6.3:547005-547024 | None:intergenic | 25.0% |
| ! | AGAGAAAATACTATAACAAG+AGG | - | chr6.3:545573-545592 | MS.gene34352:intron | 25.0% |
| ! | ATATATATATATATGGCGCT+AGG | + | chr6.3:548172-548191 | None:intergenic | 25.0% |
| ! | CAACTTAAATCATGATTCAA+AGG | + | chr6.3:549908-549927 | None:intergenic | 25.0% |
| ! | CATACAATAAACACAAGATT+AGG | - | chr6.3:550257-550276 | MS.gene34352:intron | 25.0% |
| ! | CATTTCTCAAAATAAATGGA+GGG | + | chr6.3:550000-550019 | None:intergenic | 25.0% |
| ! | CGGTTTCAATATATTGAAAT+TGG | - | chr6.3:549087-549106 | MS.gene34352:intron | 25.0% |
| ! | GCTATTTACATTTCTTATTG+TGG | - | chr6.3:546355-546374 | MS.gene34352:intron | 25.0% |
| ! | TCTCCATTTCTCAAAATAAA+TGG | + | chr6.3:550004-550023 | None:intergenic | 25.0% |
| ! | TCTTGTGTTTATTGTATGTT+TGG | + | chr6.3:550255-550274 | None:intergenic | 25.0% |
| ! | TGAAATATATATGTGTACTG+TGG | + | chr6.3:547628-547647 | None:intergenic | 25.0% |
| ! | TGATCAATGAAAATGAAATC+AGG | + | chr6.3:547360-547379 | None:intergenic | 25.0% |
| ! | TGGTTTATTCTTCATTGAAA+CGG | + | chr6.3:550529-550548 | None:intergenic | 25.0% |
| ! | TTATAAAATGGTGTATCAGT+TGG | - | chr6.3:545760-545779 | MS.gene34352:intron | 25.0% |
| ! | TTGAAATTTGAATTGGGTTT+GGG | - | chr6.3:548859-548878 | MS.gene34352:intron | 25.0% |
| ! | TTGATTCATTCATCAACAAT+TGG | - | chr6.3:550051-550070 | MS.gene34352:intron | 25.0% |
| ! | TTTCATTGATCACATAATGT+AGG | - | chr6.3:547368-547387 | MS.gene34352:intron | 25.0% |
| ! | TTTCGTTAAAGTTATGAAGT+TGG | - | chr6.3:549512-549531 | MS.gene34352:intron | 25.0% |
| !! | AATTATTTAGGACATGAGAA+GGG | + | chr6.3:550140-550159 | None:intergenic | 25.0% |
| !! | GTAACAGAGTATTAATTGAA+GGG | - | chr6.3:547059-547078 | MS.gene34352:intron | 25.0% |
| !! | GTTTGTCATTTATAAAGACT+TGG | - | chr6.3:549688-549707 | MS.gene34352:intron | 25.0% |
| !! | TAATTATTTAGGACATGAGA+AGG | + | chr6.3:550141-550160 | None:intergenic | 25.0% |
| !! | TATAAAGACTTGGTTTCTTA+TGG | - | chr6.3:549698-549717 | MS.gene34352:intron | 25.0% |
| !! | TGTAACAGAGTATTAATTGA+AGG | - | chr6.3:547058-547077 | MS.gene34352:intron | 25.0% |
| !! | TTTGAAATTTGAATTGGGTT+TGG | - | chr6.3:548858-548877 | MS.gene34352:intron | 25.0% |
| !! | TTTTATGCTTCAGATATCAA+GGG | - | chr6.3:547902-547921 | MS.gene34352:intron | 25.0% |
| !! | TTTTTATGCTTCAGATATCA+AGG | - | chr6.3:547901-547920 | MS.gene34352:intron | 25.0% |
| !!! | AATCATCACTGCTTTTTTAT+AGG | - | chr6.3:549735-549754 | MS.gene34352:intron | 25.0% |
| !!! | ATCAAGACTTTAAAATAGAG+AGG | - | chr6.3:548334-548353 | MS.gene34352:intron | 25.0% |
| !!! | CTCTATTTTAAAGTCTTGAT+AGG | + | chr6.3:548334-548353 | None:intergenic | 25.0% |
| !!! | CTTGTTATAGTATTTTCTCT+TGG | + | chr6.3:545573-545592 | None:intergenic | 25.0% |
| !!! | CTTTTGATTAACAAACCTAA+AGG | - | chr6.3:546322-546341 | MS.gene34352:intron | 25.0% |
| !!! | GGTTTGTAAGAGTATTTTTT+GGG | - | chr6.3:549108-549127 | MS.gene34352:intron | 25.0% |
| !!! | TGATAAGTTGATGTTTTTTG+AGG | - | chr6.3:546105-546124 | MS.gene34352:intron | 25.0% |
| !!! | TGGTTTGTAAGAGTATTTTT+TGG | - | chr6.3:549107-549126 | MS.gene34352:intron | 25.0% |
| !!! | TGTAGTTGATTTGTTCATTT+TGG | - | chr6.3:550691-550710 | MS.gene34352:CDS | 25.0% |
| AAAAAGCAGTGATGATTGTA+AGG | + | chr6.3:549732-549751 | None:intergenic | 30.0% | |
| AAAAGTTGTATGAGAAAGCA+AGG | - | chr6.3:549767-549786 | MS.gene34352:intron | 30.0% | |
| AAGAAATGTAAATAGCGAAG+TGG | + | chr6.3:546351-546370 | None:intergenic | 30.0% | |
| ACTTTAATAGCAGAGAACAT+AGG | + | chr6.3:549453-549472 | None:intergenic | 30.0% | |
| AGAAAAACAGATAAACTCAC+TGG | + | chr6.3:547994-548013 | None:intergenic | 30.0% | |
| AGCTAATTGCACACATATTA+AGG | - | chr6.3:546859-546878 | MS.gene34352:CDS | 30.0% | |
| ATAAACACAAGATTAGGAGA+TGG | - | chr6.3:550263-550282 | MS.gene34352:intron | 30.0% | |
| ATCATGATTCAAAGGCAAAA+AGG | + | chr6.3:549900-549919 | None:intergenic | 30.0% | |
| CAAGTTTACAAACTAATGGT+TGG | + | chr6.3:550393-550412 | None:intergenic | 30.0% | |
| CCATTTCTCAAAATAAATGG+AGG | + | chr6.3:550001-550020 | None:intergenic | 30.0% | |
| CTAAGTTAGTTATTGTCTGT+AGG | - | chr6.3:550422-550441 | MS.gene34352:intron | 30.0% | |
| CTCACAAGTTTACAAACTAA+TGG | + | chr6.3:550397-550416 | None:intergenic | 30.0% | |
| GAAAATACTATAACAAGAGG+AGG | - | chr6.3:545576-545595 | MS.gene34352:intron | 30.0% | |
| GATCTGTTGAATTTGTAAGA+TGG | - | chr6.3:548943-548962 | MS.gene34352:intron | 30.0% | |
| GTCTAACTATGATCTATCTA+CGG | + | chr6.3:548402-548421 | None:intergenic | 30.0% | |
| TAAAGATGTTAGTGAGAAGA+AGG | - | chr6.3:546183-546202 | MS.gene34352:intron | 30.0% | |
| TAATTCGAATGCGAATACTA+GGG | - | chr6.3:545877-545896 | MS.gene34352:intron | 30.0% | |
| TATCTCAGAGAAATTAAACG+TGG | + | chr6.3:550549-550568 | None:intergenic | 30.0% | |
| TATGAACAATTAGATTGACC+AGG | + | chr6.3:545833-545852 | None:intergenic | 30.0% | |
| TCATGATTCAAAGGCAAAAA+GGG | + | chr6.3:549899-549918 | None:intergenic | 30.0% | |
| TGAGTCACATTACAATGATT+TGG | + | chr6.3:549241-549260 | None:intergenic | 30.0% | |
| TTCAGTGGTTAATTTATCGT+TGG | + | chr6.3:545489-545508 | None:intergenic | 30.0% | |
| TTGCATTGCTTCAAATGTAA+AGG | - | chr6.3:548066-548085 | MS.gene34352:intron | 30.0% | |
| ! | AAACCTATTTTGCATTGTAG+CGG | - | chr6.3:546562-546581 | MS.gene34352:intron | 30.0% |
| ! | ATTATTTAGGACATGAGAAG+GGG | + | chr6.3:550139-550158 | None:intergenic | 30.0% |
| ! | ATTTGATTTCTCACTGATTG+CGG | - | chr6.3:548363-548382 | MS.gene34352:intron | 30.0% |
| ! | GGGTGTTTGAAATTTGAATT+GGG | - | chr6.3:548853-548872 | MS.gene34352:intron | 30.0% |
| ! | GTATTTTCCTAATCAGTGTT+TGG | - | chr6.3:545790-545809 | MS.gene34352:intron | 30.0% |
| ! | TACATTTGAAGCAATGCAAT+AGG | + | chr6.3:548065-548084 | None:intergenic | 30.0% |
| ! | TAGAACTATTCTGAGAACTA+TGG | + | chr6.3:548261-548280 | None:intergenic | 30.0% |
| ! | TCTTGCAGATTTCTTTTGTT+TGG | - | chr6.3:548832-548851 | MS.gene34352:intron | 30.0% |
| ! | TGCACACATATTAAGCTTTT+GGG | - | chr6.3:546866-546885 | MS.gene34352:intron | 30.0% |
| ! | TGGGTGTTTGAAATTTGAAT+TGG | - | chr6.3:548852-548871 | MS.gene34352:intron | 30.0% |
| ! | TTGCACACATATTAAGCTTT+TGG | - | chr6.3:546865-546884 | MS.gene34352:intron | 30.0% |
| ! | TTTTTATGCGGGTTTTTGAT+AGG | - | chr6.3:550288-550307 | MS.gene34352:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr6.3:547159-547178 | MS.gene34352:intron | 30.0% |
| !! | AAGTTCAAATTTTGACGAAC+CGG | + | chr6.3:545528-545547 | None:intergenic | 30.0% |
| !! | ATAGGAGAAAGTGTTATTTC+AGG | + | chr6.3:548316-548335 | None:intergenic | 30.0% |
| !! | ATGATGCTTTTTGTTATCCT+TGG | - | chr6.3:545723-545742 | MS.gene34352:intron | 30.0% |
| !! | CTTGCAGATTTCTTTTGTTT+GGG | - | chr6.3:548833-548852 | MS.gene34352:intron | 30.0% |
| !! | GGTTTTGTAATATCTGCTAA+TGG | - | chr6.3:550207-550226 | MS.gene34352:intron | 30.0% |
| !! | GTTTAATTTCTCTGAGATAC+TGG | - | chr6.3:550550-550569 | MS.gene34352:CDS | 30.0% |
| !! | TAACCTTTTTCACTTTGACA+AGG | + | chr6.3:547601-547620 | None:intergenic | 30.0% |
| !! | TGATGCTTTTTGTTATCCTT+GGG | - | chr6.3:545724-545743 | MS.gene34352:intron | 30.0% |
| !! | TTAGAGTGACTTGTTCTAAA+GGG | - | chr6.3:550757-550776 | MS.gene34352:CDS | 30.0% |
| !! | TTGCATGTTGATTTACTTCT+GGG | - | chr6.3:546791-546810 | MS.gene34352:CDS | 30.0% |
| !! | TTGTCTTATTTGTTCGTACT+TGG | - | chr6.3:548724-548743 | MS.gene34352:CDS | 30.0% |
| !! | TTTAGAGTGACTTGTTCTAA+AGG | - | chr6.3:550756-550775 | MS.gene34352:CDS | 30.0% |
| !!! | AAGGTAGAGGAGTTTTTTAA+GGG | - | chr6.3:546202-546221 | MS.gene34352:intron | 30.0% |
| !!! | AAGTTGGGATTTTTTGTTGT+TGG | - | chr6.3:550186-550205 | MS.gene34352:intron | 30.0% |
| !!! | ACATGAAAGTTGGTGTTTTT+AGG | - | chr6.3:545906-545925 | MS.gene34352:intron | 30.0% |
| !!! | ATCACTGCTTTTTTATAGGT+TGG | - | chr6.3:549739-549758 | MS.gene34352:intron | 30.0% |
| !!! | CATGAAAGTTGGTGTTTTTA+GGG | - | chr6.3:545907-545926 | MS.gene34352:intron | 30.0% |
| !!! | CATGCAATTTTTTCACTCAT+AGG | - | chr6.3:549321-549340 | MS.gene34352:intron | 30.0% |
| !!! | CCTCCATTTATTTTGAGAAA+TGG | - | chr6.3:549998-550017 | MS.gene34352:intron | 30.0% |
| !!! | TAGGAGATGGATTTTTTATG+CGG | - | chr6.3:550276-550295 | MS.gene34352:intron | 30.0% |
| !!! | TGGTGTTTTTTGATGAGAAT+GGG | - | chr6.3:545960-545979 | MS.gene34352:intron | 30.0% |
| !!! | TTGGTGTTTTTTGATGAGAA+TGG | - | chr6.3:545959-545978 | MS.gene34352:intron | 30.0% |
| !!! | TTTTTTGAGGAGAATGAGAA+AGG | - | chr6.3:546118-546137 | MS.gene34352:intron | 30.0% |
| AACTCCTCAATGTAGAAAGT+TGG | - | chr6.3:550170-550189 | MS.gene34352:intron | 35.0% | |
| AATCCCAACTTTCTACATTG+AGG | + | chr6.3:550177-550196 | None:intergenic | 35.0% | |
| ACTCCTCAATGTAGAAAGTT+GGG | - | chr6.3:550171-550190 | MS.gene34352:intron | 35.0% | |
| AGATATCAAGGGATGGTTAA+GGG | - | chr6.3:547913-547932 | MS.gene34352:intron | 35.0% | |
| AGTTAGTTATTGTCTGTAGG+AGG | - | chr6.3:550425-550444 | MS.gene34352:intron | 35.0% | |
| ATATATTCGATCACTCTGTG+CGG | - | chr6.3:550782-550801 | MS.gene34352:CDS | 35.0% | |
| ATCAATAAACCAGTAGCCAT+TGG | + | chr6.3:547716-547735 | None:intergenic | 35.0% | |
| ATGATGAGTTCGTATTGAAG+TGG | + | chr6.3:545383-545402 | None:intergenic | 35.0% | |
| ATTAAGTGTGAATTTGTGGC+AGG | - | chr6.3:547539-547558 | MS.gene34352:intron | 35.0% | |
| ATTCCGCTACAATGCAAAAT+AGG | + | chr6.3:546568-546587 | None:intergenic | 35.0% | |
| ATTTGTTCGTACTTGGCTAT+TGG | - | chr6.3:548731-548750 | MS.gene34352:CDS | 35.0% | |
| CAGTTTATGTTTCACGAGTA+CGG | + | chr6.3:550031-550050 | None:intergenic | 35.0% | |
| CATGATTCAAAGGCAAAAAG+GGG | + | chr6.3:549898-549917 | None:intergenic | 35.0% | |
| CCAGTACTTAGTACTCAAAT+GGG | + | chr6.3:547802-547821 | None:intergenic | 35.0% | |
| CGATAAATTAACCACTGAAC+CGG | - | chr6.3:545490-545509 | MS.gene34352:intron | 35.0% | |
| CTAATTCGAATGCGAATACT+AGG | - | chr6.3:545876-545895 | MS.gene34352:intron | 35.0% | |
| GAATGACCTACATATTAAGC+TGG | + | chr6.3:549347-549366 | None:intergenic | 35.0% | |
| GATGTCATTCTCATTGAAAG+TGG | + | chr6.3:547274-547293 | None:intergenic | 35.0% | |
| GTGCTATAGTTATTGTGACA+GGG | - | chr6.3:550356-550375 | MS.gene34352:intron | 35.0% | |
| GTGGAAAGAGAAAAGGAAAA+GGG | - | chr6.3:546142-546161 | MS.gene34352:intron | 35.0% | |
| GTTGAATTTGTAAGATGGTG+AGG | - | chr6.3:548948-548967 | MS.gene34352:intron | 35.0% | |
| TAACAGCTTTGCGCTTATAA+TGG | - | chr6.3:550575-550594 | MS.gene34352:CDS | 35.0% | |
| TAAGGGTTTGAATGTGAAGA+AGG | - | chr6.3:546219-546238 | MS.gene34352:intron | 35.0% | |
| TAATGCTTATCTTTCTCCCA+AGG | + | chr6.3:545743-545762 | None:intergenic | 35.0% | |
| TAGCTACTATTTGACAACAC+TGG | + | chr6.3:546405-546424 | None:intergenic | 35.0% | |
| TCCAGTACTTAGTACTCAAA+TGG | + | chr6.3:547803-547822 | None:intergenic | 35.0% | |
| TGATGAGTTCGTATTGAAGT+GGG | + | chr6.3:545382-545401 | None:intergenic | 35.0% | |
| TGGAAAGAGAAAAGGAAAAG+GGG | - | chr6.3:546143-546162 | MS.gene34352:intron | 35.0% | |
| TGGAAGATTGAAATTCGTCT+TGG | + | chr6.3:549817-549836 | None:intergenic | 35.0% | |
| TGTGACTCATAAGCAGAATT+AGG | - | chr6.3:549252-549271 | MS.gene34352:intron | 35.0% | |
| TGTGCTATAGTTATTGTGAC+AGG | - | chr6.3:550355-550374 | MS.gene34352:intron | 35.0% | |
| TGTGGAAAGAGAAAAGGAAA+AGG | - | chr6.3:546141-546160 | MS.gene34352:intron | 35.0% | |
| TTAATAGCAGAGAACATAGG+TGG | + | chr6.3:549450-549469 | None:intergenic | 35.0% | |
| TTCAACAGATCAAATTCAGC+CGG | + | chr6.3:548934-548953 | None:intergenic | 35.0% | |
| TTGTTTAATAGCTGCTATCG+TGG | - | chr6.3:546504-546523 | MS.gene34352:intron | 35.0% | |
| TTTCCTGCTTCATTAGTTGT+GGG | - | chr6.3:548894-548913 | MS.gene34352:intron | 35.0% | |
| TTTGCACTCATTTGCAAAGT+TGG | - | chr6.3:546687-546706 | MS.gene34352:intron | 35.0% | |
| ! | AAACTGTACTATAGTGGAAC+AGG | + | chr6.3:547827-547846 | None:intergenic | 35.0% |
| ! | AAGAGGTTGTTGTTAGGAAA+TGG | + | chr6.3:545307-545326 | None:intergenic | 35.0% |
| ! | AGCAAGAAAGTTCGTGTTTT+TGG | - | chr6.3:546046-546065 | MS.gene34352:intron | 35.0% |
| ! | GGTTTATTGATTGTTTGCGT+TGG | - | chr6.3:547725-547744 | MS.gene34352:intron | 35.0% |
| ! | TGATTTGGATGCATTTATCC+AGG | + | chr6.3:549226-549245 | None:intergenic | 35.0% |
| ! | TGGGTTAGAGATACAGATAT+TGG | + | chr6.3:545278-545297 | None:intergenic | 35.0% |
| ! | TTGTTGTTAGGAAATGGAGA+TGG | + | chr6.3:545301-545320 | None:intergenic | 35.0% |
| ! | TTTGATTTCTCACTGATTGC+GGG | - | chr6.3:548364-548383 | MS.gene34352:intron | 35.0% |
| ! | TTTTCCTGCTTCATTAGTTG+TGG | - | chr6.3:548893-548912 | MS.gene34352:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr6.3:546838-546857 | None:intergenic | 35.0% |
| !! | AGTTCAAATTTTGACGAACC+GGG | + | chr6.3:545527-545546 | None:intergenic | 35.0% |
| !! | ATGGAATGATTGTTAGCCTT+TGG | - | chr6.3:550226-550245 | MS.gene34352:intron | 35.0% |
| !! | CTTGCATGTTGATTTACTTC+TGG | - | chr6.3:546790-546809 | MS.gene34352:CDS | 35.0% |
| !! | GAAAAGTATCAATTCAAGCC+TGG | - | chr6.3:549205-549224 | MS.gene34352:intron | 35.0% |
| !! | GGTTGTTGATGATGATAAGT+TGG | - | chr6.3:545940-545959 | MS.gene34352:intron | 35.0% |
| !! | TGGAATGATTGTTAGCCTTT+GGG | - | chr6.3:550227-550246 | MS.gene34352:intron | 35.0% |
| !!! | AAAGTTCGTGTTTTTGGTGT+TGG | - | chr6.3:546052-546071 | MS.gene34352:intron | 35.0% |
| !!! | AAGTTCGTGTTTTTGGTGTT+GGG | - | chr6.3:546053-546072 | MS.gene34352:intron | 35.0% |
| !!! | ACTGCTTTTTTATAGGTTGG+AGG | - | chr6.3:549742-549761 | MS.gene34352:intron | 35.0% |
| !!! | AGGAGATGGATTTTTTATGC+GGG | - | chr6.3:550277-550296 | MS.gene34352:intron | 35.0% |
| !!! | ATTCAGCCGGTTTTAGTTAT+TGG | + | chr6.3:548921-548940 | None:intergenic | 35.0% |
| !!! | GAAGGTAGAGGAGTTTTTTA+AGG | - | chr6.3:546201-546220 | MS.gene34352:intron | 35.0% |
| !!! | TGGTGTTTTTAGGGAGAATA+AGG | - | chr6.3:545916-545935 | MS.gene34352:intron | 35.0% |
| !!! | TGTTTTTAGGGAGAATAAGG+AGG | - | chr6.3:545919-545938 | MS.gene34352:intron | 35.0% |
| AACACATAGGCCTCATCAAA+TGG | + | chr6.3:549009-549028 | None:intergenic | 40.0% | |
| AAGAGGAGGAAGAGAATGTA+TGG | - | chr6.3:545590-545609 | MS.gene34352:intron | 40.0% | |
| AAGCAAAACGAAGCAAAGCA+AGG | + | chr6.3:546773-546792 | None:intergenic | 40.0% | |
| ACAATTGGTGGAGATGATAC+CGG | - | chr6.3:545649-545668 | MS.gene34352:intron | 40.0% | |
| ACACATAGGCCTCATCAAAT+GGG | + | chr6.3:549008-549027 | None:intergenic | 40.0% | |
| ACACGAACAAAATTGGAGCA+TGG | + | chr6.3:548536-548555 | None:intergenic | 40.0% | |
| AGAAAAGGAAAAGGGGAAGA+GGG | - | chr6.3:546150-546169 | MS.gene34352:intron | 40.0% | |
| AGACAAATGAGCTCACACTA+TGG | - | chr6.3:548145-548164 | MS.gene34352:intron | 40.0% | |
| AGAGGAGGAAGAGAATGTAT+GGG | - | chr6.3:545591-545610 | MS.gene34352:intron | 40.0% | |
| AGCTACGCTCTATGTCAAAT+TGG | + | chr6.3:549837-549856 | None:intergenic | 40.0% | |
| AGGGTTAGGAACATGAAAGT+TGG | - | chr6.3:545896-545915 | MS.gene34352:intron | 40.0% | |
| AGTTCGTATTGAAGTGGGTA+TGG | + | chr6.3:545377-545396 | None:intergenic | 40.0% | |
| AGTTGAGGACTTTGCATAAG+AGG | - | chr6.3:545681-545700 | MS.gene34352:intron | 40.0% | |
| ATCTGCAAGAACCAGTGTTT+CGG | + | chr6.3:548822-548841 | None:intergenic | 40.0% | |
| ATGAGTGCAAAACACGAAGT+TGG | + | chr6.3:546678-546697 | None:intergenic | 40.0% | |
| ATGATTTGATGTTTGGGCCT+TGG | - | chr6.3:549063-549082 | MS.gene34352:intron | 40.0% | |
| ATGCTTCAGATATCAAGGGA+TGG | - | chr6.3:547906-547925 | MS.gene34352:intron | 40.0% | |
| ATTGAAACGGTGATATCACC+AGG | + | chr6.3:550516-550535 | None:intergenic | 40.0% | |
| ATTTGACATAGAGCGTAGCT+TGG | - | chr6.3:549837-549856 | MS.gene34352:intron | 40.0% | |
| CAATATATTGAAACCGCCCA+AGG | + | chr6.3:549083-549102 | None:intergenic | 40.0% | |
| CAGATATCAAGGGATGGTTA+AGG | - | chr6.3:547912-547931 | MS.gene34352:intron | 40.0% | |
| CATAGGCCAGCTTAATATGT+AGG | - | chr6.3:549338-549357 | MS.gene34352:intron | 40.0% | |
| CCCATTTGAGTACTAAGTAC+TGG | - | chr6.3:547799-547818 | MS.gene34352:intron | 40.0% | |
| CGAAAATTGCCCATTTGATG+AGG | - | chr6.3:548996-549015 | MS.gene34352:intron | 40.0% | |
| CTGCCAAACACGAACAAAAT+TGG | + | chr6.3:548543-548562 | None:intergenic | 40.0% | |
| GAATGAGAATGCGAATGCTA+GGG | - | chr6.3:546018-546037 | MS.gene34352:intron | 40.0% | |
| GATGGTTAAGGGTTATAGTG+GGG | - | chr6.3:547924-547943 | MS.gene34352:intron | 40.0% | |
| GGATGGTTAAGGGTTATAGT+GGG | - | chr6.3:547923-547942 | MS.gene34352:intron | 40.0% | |
| GGGGAAAAGGGTTAAAGATT+AGG | + | chr6.3:550120-550139 | None:intergenic | 40.0% | |
| GTCCTCCTCGAACTAAAAAA+CGG | + | chr6.3:546262-546281 | None:intergenic | 40.0% | |
| GTGGGTCCAATAACTAAAAC+CGG | - | chr6.3:548912-548931 | MS.gene34352:intron | 40.0% | |
| GTTACGACGATGATCATCAT+CGG | + | chr6.3:545624-545643 | None:intergenic | 40.0% | |
| GTTCGTATTGAAGTGGGTAT+GGG | + | chr6.3:545376-545395 | None:intergenic | 40.0% | |
| GTTGAGGACTTTGCATAAGA+GGG | - | chr6.3:545682-545701 | MS.gene34352:intron | 40.0% | |
| TATTGTCTGTAGGAGGAACT+TGG | - | chr6.3:550432-550451 | MS.gene34352:intron | 40.0% | |
| TCCTAATCAGTGTTTGGATC+AGG | - | chr6.3:545796-545815 | MS.gene34352:intron | 40.0% | |
| TCGCCTTGTCAAAGTGAAAA+AGG | - | chr6.3:547595-547614 | MS.gene34352:intron | 40.0% | |
| TGATTTGATGTTTGGGCCTT+GGG | - | chr6.3:549064-549083 | MS.gene34352:intron | 40.0% | |
| TGGACTTCATTCACAGTTTG+TGG | - | chr6.3:547563-547582 | MS.gene34352:intron | 40.0% | |
| TGGATGACAGGTAACTTTCT+GGG | - | chr6.3:549857-549876 | MS.gene34352:intron | 40.0% | |
| TGTATGAGAAAGCAAGGAGA+GGG | - | chr6.3:549773-549792 | MS.gene34352:intron | 40.0% | |
| TGTTAGGAAATGGAGATGGT+GGG | + | chr6.3:545297-545316 | None:intergenic | 40.0% | |
| TGTTAGTGAGAAGAAGGTAG+AGG | - | chr6.3:546189-546208 | MS.gene34352:intron | 40.0% | |
| TTACTGAGTGGTTAACCTGA+TGG | - | chr6.3:546740-546759 | MS.gene34352:intron | 40.0% | |
| TTCGTATTGAAGTGGGTATG+GGG | + | chr6.3:545375-545394 | None:intergenic | 40.0% | |
| TTGAAACGGTGATATCACCA+GGG | + | chr6.3:550515-550534 | None:intergenic | 40.0% | |
| TTGGATGACAGGTAACTTTC+TGG | - | chr6.3:549856-549875 | MS.gene34352:intron | 40.0% | |
| TTGTATGAGAAAGCAAGGAG+AGG | - | chr6.3:549772-549791 | MS.gene34352:intron | 40.0% | |
| TTGTTAGGAAATGGAGATGG+TGG | + | chr6.3:545298-545317 | None:intergenic | 40.0% | |
| TTTACTGCAGCACTAAGTGA+CGG | - | chr6.3:547307-547326 | MS.gene34352:intron | 40.0% | |
| ! | AACTAATGGTTGGTTCAGCT+TGG | + | chr6.3:550383-550402 | None:intergenic | 40.0% |
| ! | ACTAATGGTTGGTTCAGCTT+GGG | + | chr6.3:550382-550401 | None:intergenic | 40.0% |
| ! | AGTGCTGCAGTAAAAGCATA+TGG | + | chr6.3:547301-547320 | None:intergenic | 40.0% |
| ! | ATCTGGAAGAGGTTGTTGTT+AGG | + | chr6.3:545313-545332 | None:intergenic | 40.0% |
| ! | ATGCGGGTTTTTGATAGGAA+GGG | - | chr6.3:550293-550312 | MS.gene34352:intron | 40.0% |
| ! | ATGTTTGGGATAGTTCGCAT+GGG | - | chr6.3:546293-546312 | MS.gene34352:intron | 40.0% |
| ! | ATTGTATGTTTGGAGCCCAA+AGG | + | chr6.3:550245-550264 | None:intergenic | 40.0% |
| ! | GAAAGGTGTGGAAAGAGAAA+AGG | - | chr6.3:546135-546154 | MS.gene34352:intron | 40.0% |
| ! | GCTCCAATTTTGTTCGTGTT+TGG | - | chr6.3:548537-548556 | MS.gene34352:intron | 40.0% |
| ! | TATGCGGGTTTTTGATAGGA+AGG | - | chr6.3:550292-550311 | MS.gene34352:intron | 40.0% |
| ! | TCAAATGGGCAATTTTCGCA+TGG | + | chr6.3:548994-549013 | None:intergenic | 40.0% |
| !! | AAAGTGCCTTGTCCTTTTGT+GGG | - | chr6.3:549409-549428 | MS.gene34352:intron | 40.0% |
| !! | AAGAAAGATGAGGTTGGTGA+TGG | - | chr6.3:546079-546098 | MS.gene34352:intron | 40.0% |
| !! | AGTGACGGTTTAGGTTGTAT+TGG | - | chr6.3:547322-547341 | MS.gene34352:intron | 40.0% |
| !! | ATCACGCATCGCTTGTTATT+GGG | - | chr6.3:550619-550638 | MS.gene34352:CDS | 40.0% |
| !! | TATCACGCATCGCTTGTTAT+TGG | - | chr6.3:550618-550637 | MS.gene34352:CDS | 40.0% |
| !!! | AAAAGTGCCTTGTCCTTTTG+TGG | - | chr6.3:549408-549427 | MS.gene34352:intron | 40.0% |
| !!! | AGTTCGTGTTTTTGGTGTTG+GGG | - | chr6.3:546054-546073 | MS.gene34352:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr6.3:547163-547182 | MS.gene34352:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr6.3:547182-547163 | None:intergenic | 40.0% |
| !!! | GATCAGGCTTTTTTGAAACC+TGG | - | chr6.3:545812-545831 | MS.gene34352:intron | 40.0% |
| !!! | GTTTTTTAGTTCGAGGAGGA+CGG | - | chr6.3:546261-546280 | MS.gene34352:intron | 40.0% |
| !!! | TTGAGCCGTTTTTTAGTTCG+AGG | - | chr6.3:546254-546273 | MS.gene34352:intron | 40.0% |
| !!! | TTTTTTAGTTCGAGGAGGAC+GGG | - | chr6.3:546262-546281 | MS.gene34352:intron | 40.0% |
| AAAATTGGAGCATGGACCGT+CGG | + | chr6.3:548528-548547 | None:intergenic | 45.0% | |
| AATCTCCCCACAAAAGGACA+AGG | + | chr6.3:549418-549437 | None:intergenic | 45.0% | |
| ACTCTTGATCCAATGGCTAC+TGG | - | chr6.3:547704-547723 | MS.gene34352:intron | 45.0% | |
| AGAACCAGTGTTTCGGGAAA+AGG | + | chr6.3:548815-548834 | None:intergenic | 45.0% | |
| AGCCATTGGATCAAGAGTTC+CGG | + | chr6.3:547702-547721 | None:intergenic | 45.0% | |
| AGGACATGAGAAGGGGAAAA+GGG | + | chr6.3:550132-550151 | None:intergenic | 45.0% | |
| AGTAACGCAGTCTCAGCATT+CGG | + | chr6.3:546725-546744 | None:intergenic | 45.0% | |
| AGTGTGAATTTGTGGCAGGT+TGG | - | chr6.3:547543-547562 | MS.gene34352:intron | 45.0% | |
| AGTTGGAACACAGACCATCT+AGG | + | chr6.3:546661-546680 | None:intergenic | 45.0% | |
| ATAGCGAAGTGGCTACCTTT+AGG | + | chr6.3:546340-546359 | None:intergenic | 45.0% | |
| ATTTATCGTTGGCCCAGGAT+TGG | + | chr6.3:545478-545497 | None:intergenic | 45.0% | |
| CACATCGTACAGAGGTTGAA+GGG | + | chr6.3:548462-548481 | None:intergenic | 45.0% | |
| CAGAGAATCAAACAGAGCAG+AGG | + | chr6.3:548639-548658 | None:intergenic | 45.0% | |
| CGAATGAGAATGCGAATGCT+AGG | - | chr6.3:546017-546036 | MS.gene34352:intron | 45.0% | |
| CGAATGCGAATACTAGGGTT+AGG | - | chr6.3:545882-545901 | MS.gene34352:intron | 45.0% | |
| CGTTGGCAAGTCAACAAAAC+TGG | - | chr6.3:547742-547761 | MS.gene34352:intron | 45.0% | |
| GAAAAGGAAAAGGGGAAGAG+GGG | - | chr6.3:546151-546170 | MS.gene34352:intron | 45.0% | |
| GACTTTGCATAAGAGGGAAG+AGG | - | chr6.3:545688-545707 | MS.gene34352:intron | 45.0% | |
| GAGAAAAGGAAAAGGGGAAG+AGG | - | chr6.3:546149-546168 | MS.gene34352:intron | 45.0% | |
| GAGGTTGAAGGGTCCTTTAA+TGG | + | chr6.3:548451-548470 | None:intergenic | 45.0% | |
| GGGATGGTTAAGGGTTATAG+TGG | - | chr6.3:547922-547941 | MS.gene34352:intron | 45.0% | |
| GGGTTTGAATGTGAAGAAGG+AGG | - | chr6.3:546222-546241 | MS.gene34352:intron | 45.0% | |
| GGTTAATTTATCGTTGGCCC+AGG | + | chr6.3:545483-545502 | None:intergenic | 45.0% | |
| GTATGAGAAAGCAAGGAGAG+GGG | - | chr6.3:549774-549793 | MS.gene34352:intron | 45.0% | |
| GTTGAGGGTGAAGAGAAAGA+TGG | - | chr6.3:548689-548708 | MS.gene34352:CDS | 45.0% | |
| TAGACTACATTGCTGCAGTC+AGG | - | chr6.3:546617-546636 | MS.gene34352:intron | 45.0% | |
| TAGGACATGAGAAGGGGAAA+AGG | + | chr6.3:550133-550152 | None:intergenic | 45.0% | |
| TCACATCGTACAGAGGTTGA+AGG | + | chr6.3:548463-548482 | None:intergenic | 45.0% | |
| TCGGTTTAATTCCGGTTCAG+TGG | + | chr6.3:545504-545523 | None:intergenic | 45.0% | |
| TCGTAACGAGGAACAATTGG+TGG | - | chr6.3:545637-545656 | MS.gene34352:intron | 45.0% | |
| TCGTCGTAACGAGGAACAAT+TGG | - | chr6.3:545634-545653 | MS.gene34352:intron | 45.0% | |
| TCTGCAAGAACCAGTGTTTC+GGG | + | chr6.3:548821-548840 | None:intergenic | 45.0% | |
| TGAGGAGAATGAGAAAGGTG+TGG | - | chr6.3:546123-546142 | MS.gene34352:intron | 45.0% | |
| TGATGATCATCGTCGTAACG+AGG | - | chr6.3:545625-545644 | MS.gene34352:intron | 45.0% | |
| TGCGAACTATCCCAAACATG+AGG | + | chr6.3:546292-546311 | None:intergenic | 45.0% | |
| TGGCAAGTCAACAAAACTGG+TGG | - | chr6.3:547745-547764 | MS.gene34352:intron | 45.0% | |
| TTGCCAAATCTCCCCACAAA+AGG | + | chr6.3:549424-549443 | None:intergenic | 45.0% | |
| ! | AAGTGCCTTGTCCTTTTGTG+GGG | - | chr6.3:549410-549429 | MS.gene34352:intron | 45.0% |
| ! | AGTCAACAAAACTGGTGGAC+AGG | - | chr6.3:547750-547769 | MS.gene34352:intron | 45.0% |
| ! | CATGTTTGGGATAGTTCGCA+TGG | - | chr6.3:546292-546311 | MS.gene34352:intron | 45.0% |
| ! | GATCACTCTGTGCGGATTTT+GGG | - | chr6.3:550790-550809 | MS.gene34352:CDS | 45.0% |
| ! | GCCTGATCCAAACACTGATT+AGG | + | chr6.3:545800-545819 | None:intergenic | 45.0% |
| ! | GGAGGAACTTGGAGGATTTT+TGG | - | chr6.3:550443-550462 | MS.gene34352:intron | 45.0% |
| ! | TATTTACAGGTTGGGCATGC+CGG | - | chr6.3:547680-547699 | MS.gene34352:intron | 45.0% |
| ! | TGGGTTGAAGAATCTGGAAG+AGG | + | chr6.3:545324-545343 | None:intergenic | 45.0% |
| ! | TGTCCTTTTGTGGGGAGATT+TGG | - | chr6.3:549418-549437 | MS.gene34352:intron | 45.0% |
| !! | ATAGTGGGGTTTTCCGCTTA+GGG | - | chr6.3:547938-547957 | MS.gene34352:intron | 45.0% |
| !! | CAAATTTTGACGAACCGGGT+CGG | + | chr6.3:545523-545542 | None:intergenic | 45.0% |
| !! | GGAGAATGGGTTGAAGAATC+TGG | + | chr6.3:545330-545349 | None:intergenic | 45.0% |
| !! | TATAGTGGGGTTTTCCGCTT+AGG | - | chr6.3:547937-547956 | MS.gene34352:intron | 45.0% |
| !! | TCACGCATCGCTTGTTATTG+GGG | - | chr6.3:550620-550639 | MS.gene34352:CDS | 45.0% |
| !!! | AGCCGTTTTTTAGTTCGAGG+AGG | - | chr6.3:546257-546276 | MS.gene34352:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr6.3:547162-547181 | MS.gene34352:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr6.3:547181-547162 | None:intergenic | 45.0% |
| !!! | GTTCGTGTTTTTGGTGTTGG+GGG | - | chr6.3:546055-546074 | MS.gene34352:intron | 45.0% |
| !!! | TTCGTGTTTTTGGTGTTGGG+GGG | - | chr6.3:546056-546075 | MS.gene34352:intron | 45.0% |
| !! | AATATATAAAATAATAATGA+TGG | - | chr6.3:549969-549988 | MS.gene34352:intron | 5.0% |
| AAAACTCCTCCCTCCAATCC+TGG | - | chr6.3:545462-545481 | MS.gene34352:CDS | 50.0% | |
| AAACTCCTCCCTCCAATCCT+GGG | - | chr6.3:545463-545482 | MS.gene34352:CDS | 50.0% | |
| AAATTGGAGCATGGACCGTC+GGG | + | chr6.3:548527-548546 | None:intergenic | 50.0% | |
| AAGCAAGGATTCCTGCCATC+AGG | + | chr6.3:546758-546777 | None:intergenic | 50.0% | |
| AATCTCTTCGGAGAGCCGTT+AGG | + | chr6.3:550947-550966 | None:intergenic | 50.0% | |
| ACGCAAGTCACATCGTACAG+AGG | + | chr6.3:548470-548489 | None:intergenic | 50.0% | |
| AGGAAACGGAGAGTGGAGAA+TGG | + | chr6.3:545344-545363 | None:intergenic | 50.0% | |
| AGGGGAGGCTACTTCAACAT+GGG | - | chr6.3:547957-547976 | MS.gene34352:intron | 50.0% | |
| ATGGCAAGTTGCATTCTCGC+AGG | + | chr6.3:548568-548587 | None:intergenic | 50.0% | |
| ATGGGGTTGTGGAGAGGAAA+CGG | + | chr6.3:545358-545377 | None:intergenic | 50.0% | |
| CAGACAGCTGTTGACCTAGA+TGG | - | chr6.3:546644-546663 | MS.gene34352:intron | 50.0% | |
| CAGGGATATTCGACAGACTC+GGG | + | chr6.3:550497-550516 | None:intergenic | 50.0% | |
| CCAGGGATATTCGACAGACT+CGG | + | chr6.3:550498-550517 | None:intergenic | 50.0% | |
| GAACCGGAATTAAACCGACC+CGG | - | chr6.3:545506-545525 | MS.gene34352:intron | 50.0% | |
| GAACTACGCACTGAAGAACG+TGG | + | chr6.3:548605-548624 | None:intergenic | 50.0% | |
| GACGGGACTTCCTCATGTTT+GGG | - | chr6.3:546279-546298 | MS.gene34352:intron | 50.0% | |
| GCAGCACTAAGTGACGGTTT+AGG | - | chr6.3:547313-547332 | MS.gene34352:intron | 50.0% | |
| GCTATGGCACTGTAGTGTAG+CGG | - | chr6.3:546528-546547 | MS.gene34352:intron | 50.0% | |
| GGAAACGGAGAGTGGAGAAT+GGG | + | chr6.3:545343-545362 | None:intergenic | 50.0% | |
| GGACCCACAACTAATGAAGC+AGG | + | chr6.3:548900-548919 | None:intergenic | 50.0% | |
| TAGAGCGTAGCTTGGATGAC+AGG | - | chr6.3:549845-549864 | MS.gene34352:intron | 50.0% | |
| TAGCTGCTATCGTGGAGCTA+TGG | - | chr6.3:546512-546531 | MS.gene34352:intron | 50.0% | |
| TAGGGGAGGCTACTTCAACA+TGG | - | chr6.3:547956-547975 | MS.gene34352:intron | 50.0% | |
| TCGTCTTTGATGTGCTCCCA+TGG | + | chr6.3:549378-549397 | None:intergenic | 50.0% | |
| TGAGTGGTTAACCTGATGGC+AGG | - | chr6.3:546744-546763 | MS.gene34352:intron | 50.0% | |
| TGCCGGAACTCTTGATCCAA+TGG | - | chr6.3:547697-547716 | MS.gene34352:intron | 50.0% | |
| TGGCAAGTTGCATTCTCGCA+GGG | + | chr6.3:548567-548586 | None:intergenic | 50.0% | |
| TGTCTGTAGGAGGAACTTGG+AGG | - | chr6.3:550435-550454 | MS.gene34352:intron | 50.0% | |
| TGTTGGGGGGAAGAAAGATG+AGG | - | chr6.3:546069-546088 | MS.gene34352:intron | 50.0% | |
| TTGAAGTAGCCTCCCCTAAG+CGG | + | chr6.3:547954-547973 | None:intergenic | 50.0% | |
| TTGAAGTGGGTATGGGGTTG+TGG | + | chr6.3:545369-545388 | None:intergenic | 50.0% | |
| TTGTAGTTGCGCCCACCTAA+CGG | - | chr6.3:550929-550948 | MS.gene34352:CDS | 50.0% | |
| TTTGATGTTTGGGCCTTGGG+CGG | - | chr6.3:549067-549086 | MS.gene34352:intron | 50.0% | |
| ! | AGGCAAAAAGGGGCACAGAA+CGG | + | chr6.3:549888-549907 | None:intergenic | 50.0% |
| ! | ATGGGAGCACATCAAAGACG+AGG | - | chr6.3:549377-549396 | MS.gene34352:intron | 50.0% |
| ! | CGATCACTCTGTGCGGATTT+TGG | - | chr6.3:550789-550808 | MS.gene34352:CDS | 50.0% |
| ! | GAACCGGGTCGGTTTAATTC+CGG | + | chr6.3:545512-545531 | None:intergenic | 50.0% |
| ! | GATTGGAGGGAGGAGTTTTG+AGG | + | chr6.3:545461-545480 | None:intergenic | 50.0% |
| ! | TAGTGGGGTTTTCCGCTTAG+GGG | - | chr6.3:547939-547958 | MS.gene34352:intron | 50.0% |
| ! | TGCACCTTTTCCCGAAACAC+TGG | - | chr6.3:548808-548827 | MS.gene34352:intron | 50.0% |
| ! | TTAGCGGTTCGAGTGGGTTT+GGG | + | chr6.3:545422-545441 | None:intergenic | 50.0% |
| ! | TTTAGCGGTTCGAGTGGGTT+TGG | + | chr6.3:545423-545442 | None:intergenic | 50.0% |
| !! | ACTCTGTGCGGATTTTGGGA+AGG | - | chr6.3:550794-550813 | MS.gene34352:CDS | 50.0% |
| !! | ATTTTGGGAAGGCTCTTGGC+AGG | - | chr6.3:550805-550824 | MS.gene34352:CDS | 50.0% |
| AATTGGAGCATGGACCGTCG+GGG | + | chr6.3:548526-548545 | None:intergenic | 55.0% | |
| ACTTCGTCTGTCATCCCCGA+CGG | - | chr6.3:548509-548528 | MS.gene34352:CDS | 55.0% | |
| AGGTCATTCAGCGTGAGCCA+TGG | - | chr6.3:549358-549377 | MS.gene34352:intron | 55.0% | |
| ATCGTTGGCCCAGGATTGGA+GGG | + | chr6.3:545474-545493 | None:intergenic | 55.0% | |
| CCGAGTCTGTCGAATATCCC+TGG | - | chr6.3:550495-550514 | MS.gene34352:CDS | 55.0% | |
| GACGAAGTCGCAGCATACAG+AGG | + | chr6.3:548497-548516 | None:intergenic | 55.0% | |
| GCTGAGACTGCGTTACTGAG+TGG | - | chr6.3:546728-546747 | MS.gene34352:intron | 55.0% | |
| GGACGGGACTTCCTCATGTT+TGG | - | chr6.3:546278-546297 | MS.gene34352:intron | 55.0% | |
| GGAGATGATACCGGAAGCTG+TGG | - | chr6.3:545658-545677 | MS.gene34352:intron | 55.0% | |
| GGGGGGAAGAAAGATGAGGT+TGG | - | chr6.3:546073-546092 | MS.gene34352:intron | 55.0% | |
| GGTCATTCAGCGTGAGCCAT+GGG | - | chr6.3:549359-549378 | MS.gene34352:intron | 55.0% | |
| GTCCTCAACTCCACAGCTTC+CGG | + | chr6.3:545671-545690 | None:intergenic | 55.0% | |
| TACCGGAAGCTGTGGAGTTG+AGG | - | chr6.3:545666-545685 | MS.gene34352:intron | 55.0% | |
| TATCGTTGGCCCAGGATTGG+AGG | + | chr6.3:545475-545494 | None:intergenic | 55.0% | |
| TCACCCTCAACCACACACAG+TGG | + | chr6.3:548680-548699 | None:intergenic | 55.0% | |
| TCGCGTTTAGCGGTTCGAGT+GGG | + | chr6.3:545428-545447 | None:intergenic | 55.0% | |
| TCTTCGGAGAGCCGTTAGGT+GGG | + | chr6.3:550943-550962 | None:intergenic | 55.0% | |
| TGGGTTTGGGGAGATTGGGA+CGG | + | chr6.3:545409-545428 | None:intergenic | 55.0% | |
| TGTGGAGAGGAAACGGAGAG+TGG | + | chr6.3:545351-545370 | None:intergenic | 55.0% | |
| TTCGCGTTTAGCGGTTCGAG+TGG | + | chr6.3:545429-545448 | None:intergenic | 55.0% | |
| ! | CAAAAAGGGGCACAGAACGG+AGG | + | chr6.3:549885-549904 | None:intergenic | 55.0% |
| ! | CGAGTGGGTTTGGGGAGATT+GGG | + | chr6.3:545413-545432 | None:intergenic | 55.0% |
| ! | TAGCGGTTCGAGTGGGTTTG+GGG | + | chr6.3:545421-545440 | None:intergenic | 55.0% |
| ! | TCGAGTGGGTTTGGGGAGAT+TGG | + | chr6.3:545414-545433 | None:intergenic | 55.0% |
| !! | GCGGATTTTGGGAAGGCTCT+TGG | - | chr6.3:550801-550820 | MS.gene34352:CDS | 55.0% |
| !! | TGGGGTTGGTTCGCGTTTAG+CGG | + | chr6.3:545438-545457 | None:intergenic | 55.0% |
| !!! | GAGGAGTTTTGAGGTGGGGT+TGG | + | chr6.3:545452-545471 | None:intergenic | 55.0% |
| !!! | GAGGGAGGAGTTTTGAGGTG+GGG | + | chr6.3:545456-545475 | None:intergenic | 55.0% |
| !!! | GGAGGGAGGAGTTTTGAGGT+GGG | + | chr6.3:545457-545476 | None:intergenic | 55.0% |
| !!! | TGGAGGGAGGAGTTTTGAGG+TGG | + | chr6.3:545458-545477 | None:intergenic | 55.0% |
| AGAACGTGGCAGAGGCAGAG+AGG | + | chr6.3:548591-548610 | None:intergenic | 60.0% | |
| CCCTCAACCACACACAGTGG+CGG | + | chr6.3:548677-548696 | None:intergenic | 60.0% | |
| CCGCCACTGTGTGTGGTTGA+GGG | - | chr6.3:548674-548693 | MS.gene34352:CDS | 60.0% | |
| CGCACTGAAGAACGTGGCAG+AGG | + | chr6.3:548599-548618 | None:intergenic | 60.0% | |
| CTCTGATCCGCCACTGTGTG+TGG | - | chr6.3:548667-548686 | MS.gene34352:CDS | 60.0% | |
| CTCTTCGGAGAGCCGTTAGG+TGG | + | chr6.3:550944-550963 | None:intergenic | 60.0% | |
| GGAAAAGGGGAAGAGGGGTG+TGG | - | chr6.3:546156-546175 | MS.gene34352:intron | 60.0% | |
| GTGGGTATGGGGTTGTGGAG+AGG | + | chr6.3:545364-545383 | None:intergenic | 60.0% | |
| TCCGCCACTGTGTGTGGTTG+AGG | - | chr6.3:548673-548692 | MS.gene34352:CDS | 60.0% | |
| ! | TGGGGTTTTCCGCTTAGGGG+AGG | - | chr6.3:547942-547961 | MS.gene34352:intron | 60.0% |
| !! | CACACACAGTGGCGGATCAG+AGG | + | chr6.3:548669-548688 | None:intergenic | 60.0% |
| CGTGGCAGAGGCAGAGAGGA+TGG | + | chr6.3:548587-548606 | None:intergenic | 65.0% | |
| GTTGGCCCAGGATTGGAGGG+AGG | + | chr6.3:545471-545490 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 545266 | 550972 | 545266 | ID=MS.gene34352 |
| chr6.3 | mRNA | 545266 | 550972 | 545266 | ID=MS.gene34352.t1;Parent=MS.gene34352 |
| chr6.3 | exon | 550449 | 550972 | 550449 | ID=MS.gene34352.t1.exon1;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 550449 | 550972 | 550449 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 548622 | 548751 | 548622 | ID=MS.gene34352.t1.exon2;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 548622 | 548751 | 548622 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 548467 | 548549 | 548467 | ID=MS.gene34352.t1.exon3;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 548467 | 548549 | 548467 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 548245 | 548323 | 548245 | ID=MS.gene34352.t1.exon4;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 548245 | 548323 | 548245 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 546768 | 546878 | 546768 | ID=MS.gene34352.t1.exon5;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 546768 | 546878 | 546768 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 546372 | 546481 | 546372 | ID=MS.gene34352.t1.exon6;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 546372 | 546481 | 546372 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 545412 | 545495 | 545412 | ID=MS.gene34352.t1.exon7;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 545412 | 545495 | 545412 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| chr6.3 | exon | 545266 | 545303 | 545266 | ID=MS.gene34352.t1.exon8;Parent=MS.gene34352.t1 |
| chr6.3 | CDS | 545266 | 545303 | 545266 | ID=cds.MS.gene34352.t1;Parent=MS.gene34352.t1 |
| Gene Sequence |
| Protein sequence |
