Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34437.t1 | XP_003592342.3 | 99.1 | 231 | 2 | 0 | 1 | 231 | 54 | 284 | 5.60E-128 | 466.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34437.t1 | I3SR39 | 99.1 | 231 | 2 | 0 | 1 | 231 | 54 | 284 | 4.1e-128 | 466.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene34437 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene34437 | 0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene34437 | 0.819425 | 1.17E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene34437 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene34437 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene050303 | MS.gene34437 | 0.813676 | 2.27E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene34437 | -0.841371 | 4.95E-58 | -1.69E-46 |
| MS.gene050642 | MS.gene34437 | 0.859769 | 3.29E-63 | -1.69E-46 |
| MS.gene051257 | MS.gene34437 | 0.800596 | 1.34E-48 | -1.69E-46 |
| MS.gene051535 | MS.gene34437 | 0.817757 | 2.79E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene34437 | 0.85297 | 3.26E-61 | -1.69E-46 |
| MS.gene052077 | MS.gene34437 | 0.817117 | 3.89E-52 | -1.69E-46 |
| MS.gene052176 | MS.gene34437 | 0.812202 | 4.77E-51 | -1.69E-46 |
| MS.gene052309 | MS.gene34437 | -0.855133 | 7.74E-62 | -1.69E-46 |
| MS.gene054095 | MS.gene34437 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene34437 | 0.842508 | 2.48E-58 | -1.69E-46 |
| MS.gene059899 | MS.gene34437 | 0.809102 | 2.23E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene34437 | 0.828457 | 8.89E-55 | -1.69E-46 |
| MS.gene060297 | MS.gene34437 | 0.864496 | 1.17E-64 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34437.t1 | MTR_1g101840 | 97.143 | 140 | 4 | 0 | 92 | 231 | 14 | 153 | 3.02e-96 | 278 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34437.t1 | AT5G51880 | 67.965 | 231 | 70 | 2 | 1 | 231 | 24 | 250 | 1.27e-106 | 308 |
Find 45 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACCTTTGGTAACATTTC+TGG | 0.127833 | 1.2:+75985660 | None:intergenic |
| AACCTATATAATCTAATATT+TGG | 0.132507 | 1.2:+75987559 | None:intergenic |
| CTGTTCTTGCTGATTCTATT+TGG | 0.169459 | 1.2:-75987648 | MS.gene34437:CDS |
| GCTGATTCTATTTGGGATTC+TGG | 0.178268 | 1.2:-75987640 | MS.gene34437:CDS |
| GGTTTGATGGAAGGCCATTT+TGG | 0.200195 | 1.2:+75987943 | None:intergenic |
| TGTTCTTGCTGATTCTATTT+GGG | 0.287853 | 1.2:-75987647 | MS.gene34437:CDS |
| TTTACTCATCAAGGAAGTTT+AGG | 0.292415 | 1.2:-75987724 | MS.gene34437:CDS |
| AAACAACAACCGACCCAAAA+TGG | 0.337133 | 1.2:-75987957 | MS.gene34437:CDS |
| ATTGAAACTGCTGAGGGAAT+TGG | 0.349090 | 1.2:-75987748 | MS.gene34437:CDS |
| TAGAGATAATGATCGAATTT+CGG | 0.362145 | 1.2:-75987680 | MS.gene34437:CDS |
| GGAGGAGAAACAGTCTTCTA+TGG | 0.362711 | 1.2:-75985881 | MS.gene34437:CDS |
| AGATGAATCTGTAGGTTTGC+TGG | 0.376051 | 1.2:+75985919 | None:intergenic |
| TCATCTTCTGATCGTTTAGT+TGG | 0.379584 | 1.2:-75985902 | MS.gene34437:CDS |
| TACAAAGTTGGTCAACGGTT+TGG | 0.409112 | 1.2:-75986055 | MS.gene34437:CDS |
| ATGGCACTCTTGCACATTCA+TGG | 0.434758 | 1.2:-75985706 | MS.gene34437:CDS |
| CAAGAGTGCCATCCCTTCAA+TGG | 0.441258 | 1.2:+75985717 | None:intergenic |
| ATCGATGAGAGTAATGATCT+TGG | 0.448560 | 1.2:-75986025 | MS.gene34437:CDS |
| CAAATAGAATCAGCAAGAAC+AGG | 0.457794 | 1.2:+75987649 | None:intergenic |
| ATCCAAATATTAGATTATAT+AGG | 0.468123 | 1.2:-75987561 | MS.gene34437:intron |
| ACGAGATTTCGATCTCTTCA+CGG | 0.469965 | 1.2:-75987893 | MS.gene34437:intron |
| TCTTCTGATCGTTTAGTTGG+AGG | 0.471044 | 1.2:-75985899 | MS.gene34437:CDS |
| AAGAAATAGCATTGTGGCTG+AGG | 0.471528 | 1.2:-75985855 | MS.gene34437:intron |
| TGTAAAATATGTCTTTCGTT+CGG | 0.480181 | 1.2:-75985641 | MS.gene34437:CDS |
| TTACAGGTTGCTCCCATTGA+AGG | 0.491280 | 1.2:-75985730 | MS.gene34437:intron |
| CTATAAGCTTCACCTTTCGC+TGG | 0.500286 | 1.2:+75987700 | None:intergenic |
| TCGGATGTTGTATTTGCTTG+AGG | 0.515517 | 1.2:-75985622 | None:intergenic |
| GTTTATTTGAGTGGCGGACC+TGG | 0.517926 | 1.2:-75985971 | MS.gene34437:CDS |
| GCCTTGGATTTAACTTCACC+AGG | 0.523946 | 1.2:+75985953 | None:intergenic |
| TTGTATTTCAGGTACAAAGT+TGG | 0.529640 | 1.2:-75986067 | MS.gene34437:intron |
| AAGAGTGCCATCCCTTCAAT+GGG | 0.530149 | 1.2:+75985718 | None:intergenic |
| GAGAGTAATGATCTTGGAGA+TGG | 0.540105 | 1.2:-75986019 | MS.gene34437:CDS |
| TACAGGTTGCTCCCATTGAA+GGG | 0.545508 | 1.2:-75985729 | MS.gene34437:intron |
| ACTTTGCTAGTTTATTTGAG+TGG | 0.558771 | 1.2:-75985980 | MS.gene34437:CDS |
| CGATCAGAAGATGAATCTGT+AGG | 0.582135 | 1.2:+75985911 | None:intergenic |
| TCAGGTACAAAGTTGGTCAA+CGG | 0.585507 | 1.2:-75986060 | MS.gene34437:intron |
| GGTTGCTCCCATTGAAGGGA+TGG | 0.588083 | 1.2:-75985725 | MS.gene34437:CDS |
| ACCTGGTGAAGTTAAATCCA+AGG | 0.588470 | 1.2:-75985954 | MS.gene34437:CDS |
| GGCATTCATTGAAACTGCTG+AGG | 0.593567 | 1.2:-75987755 | MS.gene34437:CDS |
| TTGCTAGTTTATTTGAGTGG+CGG | 0.608800 | 1.2:-75985977 | MS.gene34437:CDS |
| ATTCGAGGGAAAGCTGCTGT+AGG | 0.610629 | 1.2:-75987589 | MS.gene34437:CDS |
| GCATTCATTGAAACTGCTGA+GGG | 0.636238 | 1.2:-75987754 | MS.gene34437:CDS |
| TTTCTGATATAAGAATTCGA+GGG | 0.649354 | 1.2:-75987603 | MS.gene34437:CDS |
| GAAGCCAGAAATGTTACCAA+AGG | 0.654558 | 1.2:-75985664 | MS.gene34437:CDS |
| GGAAGTTTAGGTCCAGCGAA+AGG | 0.660755 | 1.2:-75987712 | MS.gene34437:CDS |
| TGGTTCAAGAAATAGCATTG+TGG | 0.705639 | 1.2:-75985861 | MS.gene34437:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAGATTTTATGAATTTTA+AGG | - | chr1.2:75986236-75986255 | MS.gene34437:intron | 10.0% |
| !!! | TTTAATAAATTAGATTTTGA+TGG | + | chr1.2:75986746-75986765 | None:intergenic | 10.0% |
| !! | AACCTATATAATCTAATATT+TGG | + | chr1.2:75986041-75986060 | None:intergenic | 15.0% |
| !! | AATAATTCACAGATAAAATT+GGG | + | chr1.2:75985768-75985787 | None:intergenic | 15.0% |
| !! | ATATAAATAGCTTATACATA+AGG | - | chr1.2:75987278-75987297 | MS.gene34437:intron | 15.0% |
| !! | ATCCAAATATTAGATTATAT+AGG | - | chr1.2:75986036-75986055 | MS.gene34437:CDS | 15.0% |
| !! | TATAAATAGCTTATACATAA+GGG | - | chr1.2:75987279-75987298 | MS.gene34437:intron | 15.0% |
| !!! | TAAGATTTTAAAGGATTTTA+TGG | - | chr1.2:75986199-75986218 | MS.gene34437:intron | 15.0% |
| !!! | TTTACATCATAAGATTTTAA+AGG | - | chr1.2:75986190-75986209 | MS.gene34437:intron | 15.0% |
| !! | ACACATGATATCTTTAAATT+TGG | - | chr1.2:75987460-75987479 | MS.gene34437:intron | 20.0% |
| !! | ATAAGCTATTTATATAGCAA+AGG | + | chr1.2:75987273-75987292 | None:intergenic | 20.0% |
| !! | CAAAATCATTCAAATTTCAA+AGG | + | chr1.2:75986773-75986792 | None:intergenic | 20.0% |
| !! | GAATAATTCACAGATAAAAT+TGG | + | chr1.2:75985769-75985788 | None:intergenic | 20.0% |
| !! | TATTCTCAATCAAACTATAA+GGG | + | chr1.2:75986973-75986992 | None:intergenic | 20.0% |
| !! | TGCTATAAATGTTTAGTTAA+GGG | - | chr1.2:75987061-75987080 | MS.gene34437:intron | 20.0% |
| !! | TTATTCTCAATCAAACTATA+AGG | + | chr1.2:75986974-75986993 | None:intergenic | 20.0% |
| !! | TTGCTATAAATGTTTAGTTA+AGG | - | chr1.2:75987060-75987079 | MS.gene34437:intron | 20.0% |
| !! | TTTAATTATGAAAAAGTCTG+TGG | + | chr1.2:75986926-75986945 | None:intergenic | 20.0% |
| !!! | AGTTGTATAAAAGATTTTGT+AGG | - | chr1.2:75986106-75986125 | MS.gene34437:intron | 20.0% |
| !!! | ATTTTCAATTTGGATTTCAA+TGG | - | chr1.2:75986166-75986185 | MS.gene34437:intron | 20.0% |
| !!! | TGATACAATTTTGATTTTAC+AGG | - | chr1.2:75987851-75987870 | MS.gene34437:intron | 20.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr1.2:75987336-75987355 | MS.gene34437:intron | 25.0% |
| ! | ATAAGCTATTTATCCAAACA+GGG | - | chr1.2:75987337-75987356 | MS.gene34437:intron | 25.0% |
| ! | ATCACTTAAAAAAAGTCTCA+TGG | + | chr1.2:75986800-75986819 | None:intergenic | 25.0% |
| ! | ATGAAGACATAAGATTTCTT+GGG | + | chr1.2:75986677-75986696 | None:intergenic | 25.0% |
| ! | GCAATTTAAAAAAAGTCTTG+TGG | + | chr1.2:75986884-75986903 | None:intergenic | 25.0% |
| ! | TAGAGATAATGATCGAATTT+CGG | - | chr1.2:75985917-75985936 | MS.gene34437:CDS | 25.0% |
| ! | TGTAAAATATGTCTTTCGTT+CGG | - | chr1.2:75987956-75987975 | MS.gene34437:CDS | 25.0% |
| ! | TTTCTGATATAAGAATTCGA+GGG | - | chr1.2:75985994-75986013 | MS.gene34437:CDS | 25.0% |
| !! | AAAGACATATTTTACACCTT+TGG | + | chr1.2:75987952-75987971 | None:intergenic | 25.0% |
| !! | ATTTTTATGAGAGATAGAGA+GGG | - | chr1.2:75986333-75986352 | MS.gene34437:intron | 25.0% |
| !! | CAAACTATAAGGGATTTTAA+GGG | + | chr1.2:75986963-75986982 | None:intergenic | 25.0% |
| !! | CTTTTCATCTTATGAATCAA+AGG | - | chr1.2:75985821-75985840 | MS.gene34437:intron | 25.0% |
| !! | TCAAACTATAAGGGATTTTA+AGG | + | chr1.2:75986964-75986983 | None:intergenic | 25.0% |
| !! | TTTTCTGATATAAGAATTCG+AGG | - | chr1.2:75985993-75986012 | MS.gene34437:CDS | 25.0% |
| !!! | CATGATTTTAAAAGACAATC+AGG | - | chr1.2:75986143-75986162 | MS.gene34437:intron | 25.0% |
| !!! | CTTATTTTGATGATTTTTCC+AGG | - | chr1.2:75985788-75985807 | MS.gene34437:intron | 25.0% |
| !!! | GTCATTTTAAAAAAGTCTTG+AGG | + | chr1.2:75986842-75986861 | None:intergenic | 25.0% |
| !!! | TATTTTTATGAGAGATAGAG+AGG | - | chr1.2:75986332-75986351 | MS.gene34437:intron | 25.0% |
| !!! | TCATGCATTTTTTGTATTTC+AGG | - | chr1.2:75987519-75987538 | MS.gene34437:intron | 25.0% |
| AAATGCATGACAATTAGTGA+AGG | + | chr1.2:75987509-75987528 | None:intergenic | 30.0% | |
| ATGAAAAGAAATTCTGAACC+TGG | + | chr1.2:75985809-75985828 | None:intergenic | 30.0% | |
| CATGAAGACATAAGATTTCT+TGG | + | chr1.2:75986678-75986697 | None:intergenic | 30.0% | |
| CTAAGTTGTTTATGCAAACA+AGG | - | chr1.2:75987361-75987380 | MS.gene34437:intron | 30.0% | |
| TAAGCTATTTATCCAAACAG+GGG | - | chr1.2:75987338-75987357 | MS.gene34437:intron | 30.0% | |
| TGGGAAAAGAAAAAGAAGAA+GGG | + | chr1.2:75985749-75985768 | None:intergenic | 30.0% | |
| TTGGGAAAAGAAAAAGAAGA+AGG | + | chr1.2:75985750-75985769 | None:intergenic | 30.0% | |
| TTTACTCATCAAGGAAGTTT+AGG | - | chr1.2:75985873-75985892 | MS.gene34437:CDS | 30.0% | |
| ! | ACTTTGCTAGTTTATTTGAG+TGG | - | chr1.2:75987617-75987636 | MS.gene34437:CDS | 30.0% |
| ! | AGTGATGTGAAGATTGTTTT+TGG | + | chr1.2:75985679-75985698 | None:intergenic | 30.0% |
| ! | GACAATCAGGATTTTCAATT+TGG | - | chr1.2:75986156-75986175 | MS.gene34437:intron | 30.0% |
| ! | TTGTATTTCAGGTACAAAGT+TGG | - | chr1.2:75987530-75987549 | MS.gene34437:intron | 30.0% |
| ! | TTTTTATGAGAGATAGAGAG+GGG | - | chr1.2:75986334-75986353 | MS.gene34437:intron | 30.0% |
| !! | ATGTTGCTTAATGCAAGTTT+TGG | - | chr1.2:75987800-75987819 | MS.gene34437:intron | 30.0% |
| !! | GTGATGTGAAGATTGTTTTT+GGG | + | chr1.2:75985678-75985697 | None:intergenic | 30.0% |
| !! | TGTTCTTGCTGATTCTATTT+GGG | - | chr1.2:75985950-75985969 | MS.gene34437:CDS | 30.0% |
| !! | TGTTGCTTAATGCAAGTTTT+GGG | - | chr1.2:75987801-75987820 | MS.gene34437:intron | 30.0% |
| !!! | AAGATTGTTTTTGGGTTTGA+TGG | + | chr1.2:75985670-75985689 | None:intergenic | 30.0% |
| ATCGATGAGAGTAATGATCT+TGG | - | chr1.2:75987572-75987591 | MS.gene34437:CDS | 35.0% | |
| ATGTCACTATTTGCTTGCTT+TGG | - | chr1.2:75987824-75987843 | MS.gene34437:intron | 35.0% | |
| CAAATAGAATCAGCAAGAAC+AGG | + | chr1.2:75985951-75985970 | None:intergenic | 35.0% | |
| TATGTTCTCCTAAACAGTCT+CGG | + | chr1.2:75987133-75987152 | None:intergenic | 35.0% | |
| TCATCTTCTGATCGTTTAGT+TGG | - | chr1.2:75987695-75987714 | MS.gene34437:CDS | 35.0% | |
| TGGTTCAAGAAATAGCATTG+TGG | - | chr1.2:75987736-75987755 | MS.gene34437:CDS | 35.0% | |
| TGTCACTATTTGCTTGCTTT+GGG | - | chr1.2:75987825-75987844 | MS.gene34437:intron | 35.0% | |
| TGTTTAGTTAAGGGTCTGTT+TGG | - | chr1.2:75987070-75987089 | MS.gene34437:intron | 35.0% | |
| ! | ACTTGTTTGGGTTTATCTAC+CGG | - | chr1.2:75987097-75987116 | MS.gene34437:intron | 35.0% |
| ! | GAAATTTTCCGAGACTGTTT+AGG | - | chr1.2:75987122-75987141 | MS.gene34437:intron | 35.0% |
| ! | TACACCTTTGGTAACATTTC+TGG | + | chr1.2:75987940-75987959 | None:intergenic | 35.0% |
| ! | TTGCTAGTTTATTTGAGTGG+CGG | - | chr1.2:75987620-75987639 | MS.gene34437:CDS | 35.0% |
| ! | TTTTATGAGAGATAGAGAGG+GGG | - | chr1.2:75986335-75986354 | MS.gene34437:intron | 35.0% |
| !! | CTGTTCTTGCTGATTCTATT+TGG | - | chr1.2:75985949-75985968 | MS.gene34437:CDS | 35.0% |
| !! | CTGTTTGGATTGACTTGTTT+GGG | - | chr1.2:75987085-75987104 | MS.gene34437:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | + | chr1.2:75987213-75987232 | None:intergenic | 35.0% |
| !! | TCTGTTTGGATTGACTTGTT+TGG | - | chr1.2:75987084-75987103 | MS.gene34437:intron | 35.0% |
| !!! | GGAATTGGTTTTACTCATCA+AGG | - | chr1.2:75985864-75985883 | MS.gene34437:CDS | 35.0% |
| !!! | TTGTTTTTGGGTTTGATGGA+AGG | + | chr1.2:75985666-75985685 | None:intergenic | 35.0% |
| AAACAACAACCGACCCAAAA+TGG | - | chr1.2:75985640-75985659 | MS.gene34437:CDS | 40.0% | |
| AAGAAATAGCATTGTGGCTG+AGG | - | chr1.2:75987742-75987761 | MS.gene34437:CDS | 40.0% | |
| ACCTGGTGAAGTTAAATCCA+AGG | - | chr1.2:75987643-75987662 | MS.gene34437:CDS | 40.0% | |
| ACGAGATTTCGATCTCTTCA+CGG | - | chr1.2:75985704-75985723 | MS.gene34437:CDS | 40.0% | |
| AGATGAATCTGTAGGTTTGC+TGG | + | chr1.2:75987681-75987700 | None:intergenic | 40.0% | |
| ATTGAAACTGCTGAGGGAAT+TGG | - | chr1.2:75985849-75985868 | MS.gene34437:intron | 40.0% | |
| CAGTCTCGGAAAATTTCTAC+CGG | + | chr1.2:75987119-75987138 | None:intergenic | 40.0% | |
| CGATCAGAAGATGAATCTGT+AGG | + | chr1.2:75987689-75987708 | None:intergenic | 40.0% | |
| GAAGCCAGAAATGTTACCAA+AGG | - | chr1.2:75987933-75987952 | MS.gene34437:CDS | 40.0% | |
| GAGAAAAGAGAGGAGATAGA+GGG | - | chr1.2:75986378-75986397 | MS.gene34437:intron | 40.0% | |
| GAGAGTAATGATCTTGGAGA+TGG | - | chr1.2:75987578-75987597 | MS.gene34437:CDS | 40.0% | |
| GCATTCATTGAAACTGCTGA+GGG | - | chr1.2:75985843-75985862 | MS.gene34437:intron | 40.0% | |
| TAAACAACTTAGCCCCTGTT+TGG | + | chr1.2:75987353-75987372 | None:intergenic | 40.0% | |
| TCTTCTGATCGTTTAGTTGG+AGG | - | chr1.2:75987698-75987717 | MS.gene34437:CDS | 40.0% | |
| ! | GCTGATTCTATTTGGGATTC+TGG | - | chr1.2:75985957-75985976 | MS.gene34437:CDS | 40.0% |
| ! | TACAAAGTTGGTCAACGGTT+TGG | - | chr1.2:75987542-75987561 | MS.gene34437:intron | 40.0% |
| ! | TCAGGTACAAAGTTGGTCAA+CGG | - | chr1.2:75987537-75987556 | MS.gene34437:intron | 40.0% |
| !! | GTTTGATGGAAGGCCATTTT+GGG | + | chr1.2:75985656-75985675 | None:intergenic | 40.0% |
| !!! | GCTGGAATCATTTTTAGCCT+TGG | + | chr1.2:75987663-75987682 | None:intergenic | 40.0% |
| AGAGAGAGACGAAGAGAGAA+GGG | - | chr1.2:75986575-75986594 | MS.gene34437:intron | 45.0% | |
| AGAGAGAGAGAGAGAGAGAA+GGG | - | chr1.2:75986545-75986564 | MS.gene34437:intron | 45.0% | |
| ATGGCACTCTTGCACATTCA+TGG | - | chr1.2:75987891-75987910 | MS.gene34437:intron | 45.0% | |
| CTATAAGCTTCACCTTTCGC+TGG | + | chr1.2:75985900-75985919 | None:intergenic | 45.0% | |
| GAGAAGAGAGAGAGAGAGAA+GGG | - | chr1.2:75986469-75986488 | MS.gene34437:intron | 45.0% | |
| GGAGAAAAGAGAGGAGATAG+AGG | - | chr1.2:75986377-75986396 | MS.gene34437:intron | 45.0% | |
| GGAGGAGAAACAGTCTTCTA+TGG | - | chr1.2:75987716-75987735 | MS.gene34437:CDS | 45.0% | |
| GGCATTCATTGAAACTGCTG+AGG | - | chr1.2:75985842-75985861 | MS.gene34437:intron | 45.0% | |
| TACAGGTTGCTCCCATTGAA+GGG | - | chr1.2:75987868-75987887 | MS.gene34437:intron | 45.0% | |
| TTACAGGTTGCTCCCATTGA+AGG | - | chr1.2:75987867-75987886 | MS.gene34437:intron | 45.0% | |
| ! | GCCTTGGATTTAACTTCACC+AGG | + | chr1.2:75987647-75987666 | None:intergenic | 45.0% |
| ! | GGTTTGATGGAAGGCCATTT+TGG | + | chr1.2:75985657-75985676 | None:intergenic | 45.0% |
| !! | AAGAGTGCCATCCCTTCAAT+GGG | + | chr1.2:75987882-75987901 | None:intergenic | 45.0% |
| AGAGAGAGAAGGGAGAGAGA+GGG | - | chr1.2:75986479-75986498 | MS.gene34437:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr1.2:75986429-75986448 | MS.gene34437:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+GGG | - | chr1.2:75986429-75986448 | MS.gene34437:intron | 50.0% | |
| AGAGAGAGGGGAGAAAAGAG+AGG | - | chr1.2:75986492-75986511 | MS.gene34437:intron | 50.0% | |
| AGAGAGGAGGGAGAAAAGAG+AGG | - | chr1.2:75986604-75986623 | MS.gene34437:intron | 50.0% | |
| AGGGAGAAAAGAGAGGAGAG+AGG | - | chr1.2:75986611-75986630 | MS.gene34437:intron | 50.0% | |
| ATTCGAGGGAAAGCTGCTGT+AGG | - | chr1.2:75986008-75986027 | MS.gene34437:CDS | 50.0% | |
| GAGAGAGAGACGAAGAGAGA+AGG | - | chr1.2:75986574-75986593 | MS.gene34437:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+AGG | - | chr1.2:75986430-75986449 | MS.gene34437:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr1.2:75986430-75986449 | MS.gene34437:intron | 50.0% | |
| GGAAGTTTAGGTCCAGCGAA+AGG | - | chr1.2:75985885-75985904 | MS.gene34437:CDS | 50.0% | |
| GGAGAAGAGAGAGAGAGAGA+AGG | - | chr1.2:75986468-75986487 | MS.gene34437:intron | 50.0% | |
| GGAGAGAAGGGAGAAAAGAG+AGG | - | chr1.2:75986368-75986387 | MS.gene34437:intron | 50.0% | |
| GGGAGAAAAGAGAGGAGAGA+GGG | - | chr1.2:75986500-75986519 | MS.gene34437:intron | 50.0% | |
| !! | CAAGAGTGCCATCCCTTCAA+TGG | + | chr1.2:75987883-75987902 | None:intergenic | 50.0% |
| !! | GATGGAAGGCCATTTTGGGT+CGG | + | chr1.2:75985652-75985671 | None:intergenic | 50.0% |
| !! | GTTTATTTGAGTGGCGGACC+TGG | - | chr1.2:75987626-75987645 | MS.gene34437:CDS | 50.0% |
| AGAAGGGAGAGAGAGAGAGG+AGG | - | chr1.2:75986591-75986610 | MS.gene34437:intron | 55.0% | |
| ATAGAGAGGGGGAAGAGAGG+AGG | - | chr1.2:75986346-75986365 | MS.gene34437:intron | 55.0% | |
| GAAGGGAGAGAGAGAGAGGA+GGG | - | chr1.2:75986592-75986611 | MS.gene34437:intron | 55.0% | |
| GAGAGAAGGGAGAGAGAGAG+AGG | - | chr1.2:75986588-75986607 | MS.gene34437:intron | 55.0% | |
| GAGAGAGAAGGGAGAGAGAG+GGG | - | chr1.2:75986480-75986499 | MS.gene34437:intron | 55.0% | |
| GAGAGAGAGAAGGGAGAGAG+AGG | - | chr1.2:75986478-75986497 | MS.gene34437:intron | 55.0% | |
| GAGATAGAGAGGGGGAAGAG+AGG | - | chr1.2:75986343-75986362 | MS.gene34437:intron | 55.0% | |
| GGAAGAGAGGAGGGAGAGAA+GGG | - | chr1.2:75986356-75986375 | MS.gene34437:intron | 55.0% | |
| GGTTGCTCCCATTGAAGGGA+TGG | - | chr1.2:75987872-75987891 | MS.gene34437:intron | 55.0% | |
| TAGAGAGGGGGAAGAGAGGA+GGG | - | chr1.2:75986347-75986366 | MS.gene34437:intron | 55.0% | |
| GGGAAGAGAGGAGGGAGAGA+AGG | - | chr1.2:75986355-75986374 | MS.gene34437:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 75985624 | 75987995 | 75985624 | ID=MS.gene34437 |
| chr1.2 | mRNA | 75985624 | 75987995 | 75985624 | ID=MS.gene34437.t1;Parent=MS.gene34437 |
| chr1.2 | exon | 75987894 | 75987995 | 75987894 | ID=MS.gene34437.t1.exon1;Parent=MS.gene34437.t1 |
| chr1.2 | CDS | 75987894 | 75987995 | 75987894 | ID=cds.MS.gene34437.t1;Parent=MS.gene34437.t1 |
| chr1.2 | exon | 75987562 | 75987809 | 75987562 | ID=MS.gene34437.t1.exon2;Parent=MS.gene34437.t1 |
| chr1.2 | CDS | 75987562 | 75987809 | 75987562 | ID=cds.MS.gene34437.t1;Parent=MS.gene34437.t1 |
| chr1.2 | exon | 75985856 | 75986078 | 75985856 | ID=MS.gene34437.t1.exon3;Parent=MS.gene34437.t1 |
| chr1.2 | CDS | 75985856 | 75986078 | 75985856 | ID=cds.MS.gene34437.t1;Parent=MS.gene34437.t1 |
| chr1.2 | exon | 75985624 | 75985746 | 75985624 | ID=MS.gene34437.t1.exon4;Parent=MS.gene34437.t1 |
| chr1.2 | CDS | 75985624 | 75985746 | 75985624 | ID=cds.MS.gene34437.t1;Parent=MS.gene34437.t1 |
| Gene Sequence |
| Protein sequence |
