AlfalfaGEDB | MS.gene37415

M. sativa cultivar XinJiangDaYe / MS.gene37415

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37415.t1	XP_003603163.1	98.7	445	6	0	1	445	1	445	5.80E-222	780

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37415.t1	Q9SF32	31.5	222	129	6	64	270	67	280	4.9e-12	73.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37415.t1	G7J7P3	98.7	445	6	0	1	445	1	445	4.2e-222	780.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene04985	MS.gene37415	0.809281	2.05E-50	-1.69E-46
MS.gene049989	MS.gene37415	0.843425	1.41E-58	-1.69E-46
MS.gene050297	MS.gene37415	0.834474	2.94E-56	-1.69E-46
MS.gene050476	MS.gene37415	0.82311	1.65E-53	-1.69E-46
MS.gene050544	MS.gene37415	0.820976	5.16E-53	-1.69E-46
MS.gene051263	MS.gene37415	0.838182	3.35E-57	-1.69E-46
MS.gene051629	MS.gene37415	0.83205	1.18E-55	-1.69E-46
MS.gene052367	MS.gene37415	0.854572	1.13E-61	-1.69E-46
MS.gene053173	MS.gene37415	0.801167	1.02E-48	-1.69E-46
MS.gene053348	MS.gene37415	0.817496	3.20E-52	-1.69E-46
MS.gene053416	MS.gene37415	0.83011	3.53E-55	-1.69E-46
MS.gene053417	MS.gene37415	0.829831	4.13E-55	-1.69E-46
MS.gene054551	MS.gene37415	0.808333	3.26E-50	-1.69E-46
MS.gene054643	MS.gene37415	0.810227	1.28E-50	-1.69E-46
MS.gene055308	MS.gene37415	0.808687	2.74E-50	-1.69E-46
MS.gene055578	MS.gene37415	0.803128	4.04E-49	-1.69E-46
MS.gene055957	MS.gene37415	0.839367	1.65E-57	-1.69E-46
MS.gene056041	MS.gene37415	0.85179	7.05E-61	-1.69E-46
MS.gene056042	MS.gene37415	0.806992	6.28E-50	-1.69E-46
MS.gene05640	MS.gene37415	0.832968	6.98E-56	-1.69E-46
MS.gene057367	MS.gene37415	0.841	6.20E-58	-1.69E-46
MS.gene057458	MS.gene37415	0.805728	1.16E-49	-1.69E-46
MS.gene058853	MS.gene37415	0.803784	2.96E-49	-1.69E-46
MS.gene059300	MS.gene37415	0.811778	5.91E-51	-1.69E-46
MS.gene059553	MS.gene37415	0.82882	7.27E-55	-1.69E-46
MS.gene060473	MS.gene37415	0.845942	2.96E-59	-1.69E-46
MS.gene060565	MS.gene37415	0.831904	1.28E-55	-1.69E-46
MS.gene06093	MS.gene37415	0.843276	1.55E-58	-1.69E-46
MS.gene061099	MS.gene37415	0.809928	1.48E-50	-1.69E-46
MS.gene061260	MS.gene37415	0.822325	2.52E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37415.t1	MTR_3g104570	98.652	445	6	0	1	445	1	445	0.0	907
MS.gene37415.t1	MTR_8g017570	44.091	440	218	10	1	432	1	420	1.09e-75	243
MS.gene37415.t1	MTR_2g099780	44.780	431	188	13	1	427	1	385	7.65e-73	235
MS.gene37415.t1	MTR_4g050480	46.953	279	124	6	1	268	1	266	5.11e-59	199
MS.gene37415.t1	MTR_4g050480	47.122	278	124	6	1	268	1	265	6.35e-58	197
MS.gene37415.t1	MTR_6g033415	39.016	305	151	11	89	380	105	387	3.66e-42	154
MS.gene37415.t1	MTR_1g095740	43.503	177	90	4	90	263	140	309	1.75e-37	143
MS.gene37415.t1	MTR_8g024540	44.041	193	80	5	89	265	125	305	1.43e-36	141
MS.gene37415.t1	MTR_7g100790	42.478	226	106	7	50	265	64	275	2.94e-35	136
MS.gene37415.t1	MTR_1g066800	44.503	191	86	6	72	259	103	276	1.07e-34	135
MS.gene37415.t1	MTR_1g066800	44.503	191	86	6	72	259	108	281	1.37e-34	134
MS.gene37415.t1	MTR_2g015370	35.600	250	122	8	93	332	65	285	1.39e-32	125
MS.gene37415.t1	MTR_2g078210	35.514	214	127	6	58	270	42	245	6.27e-32	124
MS.gene37415.t1	MTR_2g078210	39.106	179	99	5	93	270	16	185	1.40e-31	121
MS.gene37415.t1	MTR_4g087420	30.114	352	207	12	56	386	112	445	2.30e-30	123
MS.gene37415.t1	MTR_0047s0040	31.466	232	131	5	50	276	60	268	1.80e-28	117
MS.gene37415.t1	MTR_1g007920	39.604	202	101	3	86	267	92	292	1.18e-25	109
MS.gene37415.t1	MTR_1g007920	39.604	202	101	3	86	267	117	317	1.46e-25	109
MS.gene37415.t1	MTR_1g103070	48.571	105	52	1	90	192	135	239	2.39e-23	102
MS.gene37415.t1	MTR_3g020990	46.903	113	52	2	104	215	103	208	6.36e-22	94.7
MS.gene37415.t1	MTR_7g114700	29.947	187	108	3	86	268	130	297	2.67e-21	96.3
MS.gene37415.t1	MTR_8g014580	62.162	74	28	0	85	158	120	193	4.90e-21	95.1
MS.gene37415.t1	MTR_3g091560	38.947	190	108	4	91	279	112	294	8.17e-21	94.7
MS.gene37415.t1	MTR_8g074730	40.000	140	74	3	28	159	2	139	1.30e-20	88.2
MS.gene37415.t1	MTR_8g102400	39.665	179	81	6	1	155	1	176	2.51e-20	93.2
MS.gene37415.t1	MTR_0019s0070	56.098	82	36	0	86	167	112	193	1.20e-19	91.3
MS.gene37415.t1	MTR_2g100740	36.628	172	89	5	1	159	1	165	1.87e-18	86.7
MS.gene37415.t1	MTR_1g101330	58.571	70	29	0	90	159	114	183	2.02e-18	87.4
MS.gene37415.t1	MTR_4g108140	33.158	190	97	5	74	262	82	242	5.52e-18	86.7
MS.gene37415.t1	MTR_4g108140	33.158	190	97	5	74	262	83	243	5.78e-18	86.7
MS.gene37415.t1	MTR_4g102840	33.511	188	99	6	1	180	1	170	1.59e-17	84.7
MS.gene37415.t1	MTR_7g114870	56.716	67	29	0	93	159	108	174	2.09e-17	84.0
MS.gene37415.t1	MTR_1g041430	47.222	108	52	1	90	192	110	217	5.26e-17	83.2
MS.gene37415.t1	MTR_5g038620	36.290	124	63	3	69	191	99	207	7.32e-13	71.2
MS.gene37415.t1	MTR_1g051810	32.847	137	81	2	93	220	107	241	7.81e-13	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene37415.t1	AT2G26180	59.502	442	147	12	1	439	1	413	3.78e-149	431
MS.gene37415.t1	AT1G72670	45.618	445	189	14	1	436	1	401	1.90e-94	291
MS.gene37415.t1	AT1G17480	37.277	448	196	14	1	440	1	371	1.61e-65	215
MS.gene37415.t1	AT3G22190	45.161	279	122	8	1	268	1	259	4.33e-49	173
MS.gene37415.t1	AT3G22190	45.161	279	122	8	1	268	1	259	4.33e-49	173
MS.gene37415.t1	AT3G22190	45.161	279	122	8	1	268	1	259	4.33e-49	173
MS.gene37415.t1	AT3G22190	45.161	279	122	8	1	268	1	259	4.33e-49	173
MS.gene37415.t1	AT5G03040	43.627	204	105	4	71	272	94	289	3.99e-41	152
MS.gene37415.t1	AT5G03040	43.627	204	105	4	71	272	94	289	3.99e-41	152
MS.gene37415.t1	AT5G03040	43.627	204	105	4	71	272	94	289	3.99e-41	152
MS.gene37415.t1	AT4G00820	33.668	398	180	15	89	443	130	486	1.39e-37	144
MS.gene37415.t1	AT1G01110	31.159	414	228	12	14	385	44	442	2.25e-36	140
MS.gene37415.t1	AT3G52290	39.674	184	102	2	90	273	107	281	3.84e-35	135
MS.gene37415.t1	AT3G15050	38.496	226	110	8	91	315	50	247	1.01e-32	125
MS.gene37415.t1	AT3G09710	38.839	224	108	7	64	269	67	279	1.33e-32	129
MS.gene37415.t1	AT3G49260	40.513	195	93	4	86	265	115	301	1.91e-32	129
MS.gene37415.t1	AT3G49260	40.000	195	93	4	86	265	115	300	2.16e-32	128
MS.gene37415.t1	AT3G49260	40.000	195	93	4	86	265	115	300	2.16e-32	128
MS.gene37415.t1	AT3G49260	40.000	195	93	4	86	265	115	300	2.16e-32	128
MS.gene37415.t1	AT3G09710	36.709	237	109	8	64	269	67	293	3.99e-31	125
MS.gene37415.t1	AT2G33990	37.853	177	99	4	90	265	46	212	1.20e-29	116
MS.gene37415.t1	AT4G10640	31.864	295	154	9	15	278	22	300	4.64e-27	112
MS.gene37415.t1	AT2G26410	35.028	177	106	4	89	263	146	315	1.82e-25	109
MS.gene37415.t1	AT2G26410	35.028	177	106	4	89	263	146	315	1.82e-25	109
MS.gene37415.t1	AT5G13460	31.897	232	120	8	58	284	86	284	6.18e-23	101
MS.gene37415.t1	AT2G43680	32.402	179	102	5	77	255	311	470	1.13e-21	98.6
MS.gene37415.t1	AT2G43680	32.402	179	102	5	77	255	311	470	1.13e-21	98.6
MS.gene37415.t1	AT2G43680	32.402	179	102	5	77	255	311	470	1.13e-21	98.6
MS.gene37415.t1	AT2G43680	32.402	179	102	5	77	255	311	470	1.13e-21	98.6
MS.gene37415.t1	AT2G43680	32.402	179	102	5	77	255	312	471	1.23e-21	98.2
MS.gene37415.t1	AT4G14750	30.802	237	143	7	1	221	1	232	1.96e-21	95.9
MS.gene37415.t1	AT4G14750	30.802	237	143	7	1	221	60	291	3.68e-21	95.9
MS.gene37415.t1	AT4G14750	30.802	237	143	7	1	221	60	291	4.40e-21	95.5
MS.gene37415.t1	AT3G59690	34.641	153	92	4	81	231	160	306	7.89e-21	95.5
MS.gene37415.t1	AT3G59690	34.641	153	92	4	81	231	160	306	7.89e-21	95.5
MS.gene37415.t1	AT1G51960	33.173	208	117	7	1	198	1	196	7.94e-19	87.8
MS.gene37415.t1	AT4G23060	57.333	75	32	0	91	165	167	241	2.00e-18	87.8
MS.gene37415.t1	AT3G16490	49.451	91	38	2	90	180	106	188	2.84e-18	86.7
MS.gene37415.t1	AT1G18840	48.052	77	40	0	88	164	106	182	7.28e-18	86.7
MS.gene37415.t1	AT1G18840	48.052	77	40	0	88	164	106	182	7.28e-18	86.7
MS.gene37415.t1	AT1G18840	48.052	77	40	0	88	164	106	182	7.28e-18	86.7
MS.gene37415.t1	AT5G07240	66.667	63	20	1	90	151	104	166	2.47e-17	84.0
MS.gene37415.t1	AT5G07240	66.667	63	20	1	90	151	150	212	2.86e-17	84.3
MS.gene37415.t1	AT3G51380	57.812	64	27	0	89	152	35	98	8.43e-16	73.6
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.12e-15	79.7
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.12e-15	79.7
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.12e-15	79.7
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.21e-15	79.7
MS.gene37415.t1	AT1G74690	39.316	117	66	1	62	178	84	195	1.26e-15	79.7
MS.gene37415.t1	AT4G29150	61.538	65	25	0	89	153	129	193	1.27e-15	79.0
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.31e-15	79.7
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.31e-15	79.7
MS.gene37415.t1	AT1G14380	35.928	167	90	5	1	157	1	160	1.31e-15	79.7
MS.gene37415.t1	AT5G03960	37.956	137	74	2	93	222	110	242	6.99e-15	76.6
MS.gene37415.t1	AT5G03960	37.956	137	74	2	93	222	110	242	6.99e-15	76.6
MS.gene37415.t1	AT5G03960	37.956	137	74	2	93	222	109	241	7.28e-15	76.6
MS.gene37415.t1	AT1G01110	28.125	288	162	9	134	385	1	279	1.27e-14	75.5
MS.gene37415.t1	AT5G62070	61.667	60	23	0	86	145	112	171	2.20e-14	75.1
MS.gene37415.t1	AT3G49380	38.235	136	67	4	19	147	41	166	3.21e-14	74.3
MS.gene37415.t1	AT1G19870	35.938	128	60	3	47	152	149	276	4.30e-13	72.0
MS.gene37415.t1	AT1G19870	53.226	62	29	0	91	152	32	93	1.88e-12	69.7
MS.gene37415.t1	AT2G02790	41.892	74	43	0	84	157	100	173	9.75e-11	64.3
MS.gene37415.t1	AT2G02790	41.892	74	43	0	84	157	100	173	9.75e-11	64.3

Find 116 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATGGGTGCTTCTGGAAAA+TGG	0.162318	3.4:-91549378	MS.gene37415:CDS
AACGAGTAGCTTGTCCAATA+TGG	0.247199	3.4:+91542782	None:intergenic
AAGGGTTCTGCAAATTTCTT+TGG	0.258449	3.4:+91542886	None:intergenic
TGAGTCAGGTTCATGTAATT+TGG	0.262145	3.4:+91542631	None:intergenic
GCAACACTCATGGGTGCTTC+TGG	0.264318	3.4:-91549385	None:intergenic
AACCACTTTCCGCGCCTTCT+TGG	0.292272	3.4:-91548990	MS.gene37415:intron
CTTTGTTCATCTCGTGATTC+CGG	0.304293	3.4:+91543019	None:intergenic
AGCAAGCTGCAGTGACATTA+AGG	0.326388	3.4:-91543737	MS.gene37415:CDS
GCTAAGCCTCCTCCCCATAT+TGG	0.363494	3.4:-91542796	MS.gene37415:CDS
AACCAAGGCAAAGCTAAAAT+CGG	0.368576	3.4:-91542605	MS.gene37415:CDS
TTGCCTTGGTTGATTGAGTC+AGG	0.373865	3.4:+91542617	None:intergenic
ACATGTTGTTCATCTTTGTC+TGG	0.374417	3.4:+91549328	None:intergenic
AATTTCTTTGGAGGTGGCGG+TGG	0.375706	3.4:+91542898	None:intergenic
CACCGAGCTCTTGTCCGATT+GGG	0.391424	3.4:+91542429	None:intergenic
TGAGGATTCAAGCACTTGTC+AGG	0.392686	3.4:-91543776	MS.gene37415:CDS
CACGAGATGAACAAAGCTAA+TGG	0.399444	3.4:-91543012	MS.gene37415:CDS
AGAAGGCGCGGAAAGTGGTT+TGG	0.400404	3.4:+91548993	None:intergenic
ACGAGATGAACAAAGCTAAT+GGG	0.406154	3.4:-91543011	MS.gene37415:CDS
CAAGTCCAAGTTCCGAGTTT+CGG	0.408556	3.4:-91542753	MS.gene37415:CDS
ACCCTTCAGAAGCTGCTTTG+TGG	0.408756	3.4:+91549125	None:intergenic
GCCTTGGGAGACTAGATTGA+TGG	0.409779	3.4:-91542953	MS.gene37415:CDS
GATGGAGTTGGTTGGAAAGA+TGG	0.411885	3.4:-91542987	MS.gene37415:CDS
CTAACAAGTCTAAAATCCTT+AGG	0.416040	3.4:+91549040	None:intergenic
TCGTACCGAAACTCGGAACT+TGG	0.431873	3.4:+91542748	None:intergenic
TCACCGAGCTCTTGTCCGAT+TGG	0.433938	3.4:+91542428	None:intergenic
CATGGGTGCTTCTGGAAAAT+GGG	0.436014	3.4:-91549377	MS.gene37415:CDS
AAATGGGTCAAAGCATTAAT+CGG	0.439295	3.4:-91549361	MS.gene37415:CDS
AAGGGCTTTGAGGGCATTGA+AGG	0.446119	3.4:-91543805	MS.gene37415:CDS
ATTTCTTTGGAGGTGGCGGT+GGG	0.446397	3.4:+91542899	None:intergenic
ACGAGTAGCTTGTCCAATAT+GGG	0.450987	3.4:+91542783	None:intergenic
TTAGACTTGTTAGGCAAGAA+TGG	0.452196	3.4:-91549030	MS.gene37415:CDS
AGCTCAAAGGCAACAGTCAA+TGG	0.457003	3.4:-91542560	MS.gene37415:CDS
TAGACTTGTTAGGCAAGAAT+GGG	0.462512	3.4:-91549029	MS.gene37415:CDS
GGTTCTGCAAATTTCTTTGG+AGG	0.465140	3.4:+91542889	None:intergenic
TGCAGGCAAGAAGGGCTTTG+AGG	0.465225	3.4:-91543815	MS.gene37415:intron
TTTGAGATTTCCAGCAATGC+AGG	0.466329	3.4:-91543089	MS.gene37415:intron
GATGGATGGCAGCCAAGCCT+TGG	0.468070	3.4:-91542969	MS.gene37415:CDS
CATCAGGAGATAACAGTTCA+TGG	0.470128	3.4:-91549168	MS.gene37415:CDS
GCAGGCAAGAAGGGCTTTGA+GGG	0.472599	3.4:-91543814	MS.gene37415:intron
TCTGCAAATTTCTTTGGAGG+TGG	0.475452	3.4:+91542892	None:intergenic
TTCAAATTCGAGCTTACAAA+GGG	0.481570	3.4:+91542868	None:intergenic
TCGTCGTGTGAGGATGTCTA+TGG	0.489827	3.4:-91543673	MS.gene37415:CDS
ACATCCACAACTCCAATGTC+AGG	0.493112	3.4:-91542697	MS.gene37415:CDS
CTTCAGAAGCTGCTTTGTGG+TGG	0.503461	3.4:+91549128	None:intergenic
CGCGAATTAGTGCTTGAGGT+TGG	0.505381	3.4:+91543066	None:intergenic
TGAGTTTCAATTTATGAAGA+GGG	0.508341	3.4:-91542536	MS.gene37415:CDS
GCAAATTTCTTTGGAGGTGG+CGG	0.508534	3.4:+91542895	None:intergenic
TGTTTGAAGGTGAAGGAGGG+TGG	0.510225	3.4:-91549223	MS.gene37415:intron
ATGGATGGCAGCCAAGCCTT+GGG	0.511965	3.4:-91542968	MS.gene37415:CDS
AGGTTATGGAGAAGTTCATC+AGG	0.515436	3.4:-91549184	MS.gene37415:CDS
AAAATTCAAATGAGGCAAGA+AGG	0.523644	3.4:-91543454	MS.gene37415:CDS
TGCATACTCACTTGCTCAGA+AGG	0.524622	3.4:-91543407	MS.gene37415:intron
ACCAAGGCAAAGCTAAAATC+GGG	0.526058	3.4:-91542604	MS.gene37415:CDS
TCACAAGTGTTCCCTGACAT+TGG	0.528516	3.4:+91542685	None:intergenic
GGTTATGAGTGCAGGCAAGA+AGG	0.532390	3.4:-91543824	MS.gene37415:intron
CGTTGTTAGAGCTCAACCTA+AGG	0.533918	3.4:-91549056	MS.gene37415:CDS
GTTATGAGTGCAGGCAAGAA+GGG	0.535330	3.4:-91543823	MS.gene37415:intron
ACTCTCATCGTACCGAAACT+CGG	0.535615	3.4:+91542741	None:intergenic
TTCATTAAGCATATTCTGCA+CGG	0.537002	3.4:+91543641	None:intergenic
TACCAAGAAGGCGCGGAAAG+TGG	0.545045	3.4:+91548988	None:intergenic
ACTTCACCTACCAACCCAAT+CGG	0.545649	3.4:-91542443	MS.gene37415:CDS
CAATCTAGTCTCCCAAGGCT+TGG	0.546403	3.4:+91542957	None:intergenic
CACCACAAAGCAGCTTCTGA+AGG	0.550489	3.4:-91549127	MS.gene37415:CDS
GTGTAAGCTTCTGCAGCAGT+TGG	0.555988	3.4:+91549094	None:intergenic
TTTGAGGGCATTGAAGGCAG+TGG	0.558218	3.4:-91543799	MS.gene37415:CDS
AGGAGATAACAGTTCATGGA+AGG	0.563394	3.4:-91549164	MS.gene37415:CDS
TTATGTTTGAAGGTGAAGGA+GGG	0.568504	3.4:-91549226	MS.gene37415:intron
ATGAGTTTCAATTTATGAAG+AGG	0.569955	3.4:-91542537	MS.gene37415:CDS
CGAGATGAACAAAGCTAATG+GGG	0.570107	3.4:-91543010	MS.gene37415:CDS
GAGAGTGGAAAATGAGGTGT+TGG	0.571769	3.4:+91543041	None:intergenic
GAGCTCTTGTCCGATTGGGT+TGG	0.575108	3.4:+91542433	None:intergenic
GAGTAAGAGCTCGTCGTGTG+AGG	0.575741	3.4:-91543683	MS.gene37415:CDS
TTTCAAATTCGAGCTTACAA+AGG	0.575937	3.4:+91542867	None:intergenic
GTTCCCTGACATTGGAGTTG+TGG	0.575976	3.4:+91542693	None:intergenic
CTCGAATTTGAAACCATGCT+CGG	0.576259	3.4:-91542857	MS.gene37415:CDS
GCTTGTCCAATATGGGGAGG+AGG	0.576470	3.4:+91542790	None:intergenic
TCTTGTCCGATTGGGTTGGT+AGG	0.578767	3.4:+91542437	None:intergenic
AGTGACATTAAGGTGCATGC+AGG	0.581722	3.4:-91543727	MS.gene37415:CDS
AGGATAGTTGTAACAGCACT+AGG	0.582943	3.4:-91542654	MS.gene37415:CDS
TCGTGTGAGGATGTCTATGG+AGG	0.584361	3.4:-91543670	MS.gene37415:CDS
GATTGGGTTGGTAGGTGAAG+TGG	0.587150	3.4:+91542445	None:intergenic
CATCTCGTGATTCCGGAGAG+TGG	0.591885	3.4:+91543026	None:intergenic
GTGTGATAGCATAGGAACAT+TGG	0.592155	3.4:-91543491	MS.gene37415:CDS
AATATGGGGAGGAGGCTTAG+CGG	0.592945	3.4:+91542798	None:intergenic
AACCCAATCGGACAAGAGCT+CGG	0.593120	3.4:-91542431	MS.gene37415:CDS
GAGGATTCAAGCACTTGTCA+GGG	0.594722	3.4:-91543775	MS.gene37415:CDS
TTTCTTTGGAGGTGGCGGTG+GGG	0.595890	3.4:+91542900	None:intergenic
TTTATGTTTGAAGGTGAAGG+AGG	0.601205	3.4:-91549227	MS.gene37415:intron
ACCACAAAGCAGCTTCTGAA+GGG	0.605684	3.4:-91549126	MS.gene37415:CDS
AGGAGCTTTCAAAAGAGAGA+GGG	0.607085	3.4:-91543434	MS.gene37415:CDS
GGAGATAACAGTTCATGGAA+GGG	0.611321	3.4:-91549163	MS.gene37415:CDS
AGTGCTGTTACAACTATCCT+CGG	0.615531	3.4:+91542657	None:intergenic
GAAGGGTGGTGTGATAGCAT+AGG	0.616172	3.4:-91543499	MS.gene37415:CDS
ACAAGAGCTCGGTGAGACCA+TGG	0.619435	3.4:-91542420	MS.gene37415:CDS
TCCATCAATCTAGTCTCCCA+AGG	0.620091	3.4:+91542952	None:intergenic
AGAAGCTTACACTGCTGCTG+TGG	0.620813	3.4:-91549083	MS.gene37415:CDS
AAGGAGCTTTCAAAAGAGAG+AGG	0.623020	3.4:-91543435	MS.gene37415:CDS
GGGCATTGAAGGCAGTGGTG+AGG	0.626128	3.4:-91543794	MS.gene37415:CDS
ATTCCGGAGAGTGGAAAATG+AGG	0.631071	3.4:+91543035	None:intergenic
CGAGTAGCTTGTCCAATATG+GGG	0.633366	3.4:+91542784	None:intergenic
CGTGTGAGGATGTCTATGGA+GGG	0.633588	3.4:-91543669	MS.gene37415:CDS
GAGTTGGTTGGAAAGATGGA+TGG	0.634715	3.4:-91542983	MS.gene37415:CDS
TGTCAGGGAACACTTGTGAA+AGG	0.634990	3.4:-91542681	MS.gene37415:CDS
GGTTCGCGAATTAGTGCTTG+AGG	0.643363	3.4:+91543062	None:intergenic
AAATGTATAACAGAGCTCAA+AGG	0.643845	3.4:-91542573	MS.gene37415:CDS
TTGTGAATCTGCAGGAAGGG+TGG	0.652606	3.4:-91543513	MS.gene37415:intron
CATCCACAACTCCAATGTCA+GGG	0.657914	3.4:-91542696	MS.gene37415:CDS
CTTAGGTTGAGCTCTAACAA+CGG	0.664616	3.4:+91549057	None:intergenic
AATTGAATACCAAGAAGGCG+CGG	0.680101	3.4:+91548981	None:intergenic
AGGATTCAAGCACTTGTCAG+GGG	0.684889	3.4:-91543774	MS.gene37415:CDS
TTGTCAGGGGTAGACAAGTG+AGG	0.688660	3.4:-91543761	MS.gene37415:CDS
GTAGCTTGTCCAATATGGGG+AGG	0.689343	3.4:+91542787	None:intergenic
GAACCTGACTCAATCAACCA+AGG	0.696026	3.4:-91542620	MS.gene37415:CDS
AAAAGAACAATGTCACAACA+AGG	0.709510	3.4:-91542825	MS.gene37415:CDS
GAGATGAACAAAGCTAATGG+GGG	0.721370	3.4:-91543009	MS.gene37415:CDS
GAACACTTGTGAAAGGACCG+AGG	0.744801	3.4:-91542674	MS.gene37415:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr3.4	gene	91542417	91549398	91542417	ID=MS.gene37415
chr3.4	mRNA	91542417	91549398	91542417	ID=MS.gene37415.t1;Parent=MS.gene37415
chr3.4	exon	91549330	91549398	91549330	ID=MS.gene37415.t1.exon1;Parent=MS.gene37415.t1
chr3.4	CDS	91549330	91549398	91549330	ID=cds.MS.gene37415.t1;Parent=MS.gene37415.t1
chr3.4	exon	91548991	91549236	91548991	ID=MS.gene37415.t1.exon2;Parent=MS.gene37415.t1
chr3.4	CDS	91548991	91549236	91548991	ID=cds.MS.gene37415.t1;Parent=MS.gene37415.t1
chr3.4	exon	91543605	91543832	91543605	ID=MS.gene37415.t1.exon3;Parent=MS.gene37415.t1
chr3.4	CDS	91543605	91543832	91543605	ID=cds.MS.gene37415.t1;Parent=MS.gene37415.t1
chr3.4	exon	91543408	91543521	91543408	ID=MS.gene37415.t1.exon4;Parent=MS.gene37415.t1
chr3.4	CDS	91543408	91543521	91543408	ID=cds.MS.gene37415.t1;Parent=MS.gene37415.t1
chr3.4	exon	91542417	91543097	91542417	ID=MS.gene37415.t1.exon5;Parent=MS.gene37415.t1
chr3.4	CDS	91542417	91543097	91542417	ID=cds.MS.gene37415.t1;Parent=MS.gene37415.t1

Gene Sequence

>MS.gene37415

ATGGGTGCTTCTGGAAAATGGGTCAAAGCATTAATCGGATTCAAGAAACCAGACAAAGATGAACAACATGTAAGTTACAAATTATAGTTACTATTTTCATACAACCCACAAAAAAAGTTTGTTTTTTTGTTGTTGTTGACTATGTTTGGTTTATGTTTGAAGGTGAAGGAGGGTGGTAAAAGTAAAAAATGGAGGTTATGGAGAAGTTCATCAGGAGATAACAGTTCATGGAAGGGTTTCAAAACAAACCACCACAAAGCAGCTTCTGAAGGGTCTGAATCTCCAACTGCTGCAGAAGCTTACACTGCTGCTGTGGCTACCGTTGTTAGAGCTCAACCTAAGGATTTTAGACTTGTTAGGCAAGAATGGGCTGCTATAAGAATCCAAACCACTTTCCGCGCCTTCTTGGTATTCAATTTTTTCAACCTTCAACTCAAGCTTTTATTTTTATTAAATTTGTGTTTTTGTTCCTCTTTGATGACTATTTATTTTCATGTTTATAGACAAAGTTAAGCTAAAGCATTAAGCTTTTATTCAAAATCTGTTAGAATACAGCAAGAGTTGATCACATTTATTATTCATCATTGTGTAAATAATTATAGTTAATTGTACAATAACTATTCATCATTGTGTAAATAATTATAGTTAATTGTACAATAACTCCCACCTTAATTGGAGTTAATGTATTGTTGTATATATGTTTGCCAAATCAATGAGAATAGACAGGCAGTATAATTCTTACATGGTATCACGAGTCTGATCCTAAAACACAAACCCGCCGCAACTCTCTTTCATTTTCATCAATGGCAGACAACAAAAACTTTCACCCCGCCTTTGCCGTGAACAATATCAAAAACTTCATTCCCATCACTCTAGAAATGGAAACCAATCACTACTCCACATGGGTAGAATTGTTCAAAACTCATTGCACAGTCTACCAAGTCATTGATCACATAATCCCAACCACACCAGAAACAGAATCCTCAAATGAAAAAGATAAAGCAACGGCCGGTAACAAAGAAGGATCCGTTACAGAAAAGGAAAAATCTGCCAAGAGTGACAAAGAACAGTGGTCACGCCTGGATGCAATCGTTCGCCAATGGATTTACGGAACGATCTCCATTGACCTCCTTCACACCATCATGTCACCGGGTTCAACCGCACAGCAAACATGGGAGCGATTGGAAAACATTTTCCAGGACAACAAAGCTTCTCGTGCCGTCCACCTGGAAAACCAATTCACACGCGTCCATTTGGATGACTTTCCCAACATCTCGGCATACTGCCAAGAACTCAAGATGATTGCTGACCAACTGTCAAACGTTGGTTCACCGGTTTCGAACCAAAGGTTAGTTCTCCAGTTAATTGCGGGTCTAAATGAGAACTACGATGGTGTTGCTATTTTTATTCAACAAAGTAATCCTTTGCCGCTATTTCATGAGGCACGATCGAGGTTGATCCTCGAAGAAACCCGCAAGGCAAAGCAAGCTGCTGCCACAGCCAATGCCGCAGGCACCGCTCTTCTCACCACAAATCAATCGAATGATGACACCTCTGGTCACAGTCGTGGTGTTACCCAAGGTTCCAGAAATCCAGCACACCGTAATAATTTTGGTCAAAAACGCGGTCAGAACAAAAACAACAATCGTGGTAGAAATGGTGGCGGTAGAGGACGAGGTCGCAGTAACAACAATCAAAACAGTGGACAGCAATACAATCCACGTCCATGGCAGCAACAACAGTGGCCATCATACCCACAATGGGGACCGTGGGGACAACAACCATGGGCAGCTCCACCATGTCCTTACCCCACATCCAATTGGGTTCGTCCACCATCAAATCGTTCTCCCGTGGCTGCAGGAACTCGTCCACCACAGGCTTACAGTGCTCATGGACCAACATCTTCAAATTATGCACCTACAGACATTGATGCGGCAATGCAAAATCTGTCCATGAATGTTCCTGATGAAAATTGGTACATGGACACTGGTGCAACAGCACACATGACTGCATCTCAAGGTACTCTCTCAACTTATTCTAATTTGAGCATTAATAAAAATATCGTTGTTGGCAGTGGACAGGAAATTCCAATTCGTGGTTATGGACAAACACATCTTTCCCCACCTTATCCACCCCTATCATTAAACAATGTCCTTCATGCCCCTAAACTCATTAAAAACTTAATATCTGTGCGTCGTTTCACAATTGATAATAATGTTACCATTGAGTTTGATCCTTTTGGTTTTTCTGTGAAGGATATACAGACGGGGATGCCACTAATGAGATGTGATAGCACAGGGGATCTATATCCTCTCACCACAACCACAAGAAATCAATCCACCTCTCCAGCAACCTTTGCAGCTCTCTCTCCTACCTTATGGCACAACCGTTTGGGACACCCTGGATCCAATGTTTTAAGTTTTCTTAGCAAAAATAAGTTTATTGAGTGTAAACAAATCTCTAGTTCTTCTATTTGTCAATCTTGCATTTATGGGAAACATGTTAAATTACCTTTTTCTATTTCAAATTCTAATACTTCCAAGCCTTTTGATATAATCCATAGTGATTTGTGGACATCGCCAATTTTAAGTTCAGCAGGTCATAAATATTACCTTTTTTTCTTAGATGATTACACCAATTTTGTGTGGACATTTCCCATTGGAAGAAAGTCACAAGTCCCTTCCATTTTTTCCTCATTTCATGCATTCATTAAAACCCAATTTGGAACTACAATCAAATGTTTTCAATGTGATAATGGACGAGAATTTAATAACGAGTACTTTACACAATTTTGTCACAAAAATGGCATGGTATTTCGTTTTTCTTGTCCACACACTTCACCACAAAATGGAAAAGCTGAACGTAAAATACGAGCAATTAATAATTTCATCCGTACTAGCCTTGCACATTCATCTATGCCACCATCATTTTGGCACCATGCTCTACAAATCACCACATACCTTCAAAACATTCTACCCAGCAAGATTCTCTCACATCACTCCCCCACTCAATACTTATATCATAAGGATCCCTCGTATACACATTTACGTGTGTTTGGGTGTTTGTGCTATCCTCTCTTTCCCTCTACCACCATCAATAAACTACAAGCCCGCTCCACCCCATGTGCCTTCTTAGGTTATCCACAAAATCACCGTGGTTACAAATGCTACGATTTGTCTAGCAAGAAAATAATAATTTCTAGACATGTCATATTTGATGAGACCCAATTCCCATTTGCCAAAATACATACTCCCTCCACTCACACCTATGAATTCTTAAATGACGGCCTTCATCCAATTCTACACTACCACCTCCAAAATGATTCAAAACAAGATGAACCGGAACCACCTACAACTGAATCACCACAACCTGCCATAACACAGGCCTCACCCATTAATGTGACAAACCAAAGCATAATACCGTCTTCCCCTATACTTATTAACCCATTACCCCATCCACCCGACTCAACAGAACTCACATCTCATATGCATACTCCACAACAAATCCATCAAGAACCAACCCGAACCATGGCAACCCGCAGTATGCATGGAATTCATAAACCTAAAACTCAATTCAACTTGACCACCTCAATTACACCATCACCACTTCCCCACAACCCTAAGGCAGCCTTGTCCGACCCGAATTGGAAAGCTGCCATGTTAGACGAATTTGATGCTCTTATTAAAAATAAGACATGGGAATTGGTACCACGTCCACAAAATGTTAATGTTATTCGCTCTATGTGGATATTTCGTCACAAAAAGAAATCAGATGGGTCATTTGAGAGGTACAAAGCTCGACTTGTAGGTGATGGAAGATCTCAACAGGTTGGATTAGATTGTGATGAAACATTCAGCCCAGTTGTGAAACCAACGACTATTCGTATAGTACTTACTATAGCTCTATCAAAGTCGTGGTCCATTCATCAGCTAGATGTTAAAAATGCATTTCTTCACGGTGAACTTCAAGAAACCGTATACATGCATCAGCCGATGGGTTTTCGAGACCCAATCCATCCAGATTATGTTTGTTTATTGAAGAAATCTCTTTATGGCCTTAAACAGGCCCCTCGTGCTTGGTACCAACGGTTTGCTGATTTTGCACTCACCATCGGTTTTTCCCATAGCAAATCTGATCATTCTCTATTTATTTATAGGAAAGATAATGACATGGCATATATTTTACTCTATGTTGACGACATCATTCTTACTGCATCATCTGATGCTCTTCGTCAGTCTATTATGTCACTTCTTGCCTCCGAATTTGCTATGAAAGATTTGGGCACTCTAAGTTATTTTTTAGGCCTTGCAGTTACACATCATGCAGGTGGCTTATTTCTTAGTCAAAGAAAATATGCGTCTGAGATAATTGAACGAGCAGGTATGACCTCATGCAAACCAACAGCTACGCCAGTGGATACCAAATCTAAGCTAAGTACCTCATCAGGTTCTCCATACAAAGATCTTACACACTATAGGAGATTAGCAGGTGCATTACAATATCTCACATTCACGAGACCAGATATATCATATGCTGTACAACAGGTGTGCTTGCACATGCATGACCCAAAGGATGAACATATGAATGCTCTCAAACGCATTCTGCGATATCTTCAAGGTACTCTTGACCATGGCCTACATCTATATAAATCTTCTGTTTCTGGTCTCATCTCCTACACAGACGCCGATTGGGGTGGGTGCCCCGATACTCGACGTTCCACCTCTGGATATTGCATCTTCCTTGGTGACAACTTGATATCATGGTCATCTAAGCGTCAACCAACTCTATCTCGATCAAGTGCTGAAGCCGAATATAGAGGGGTTGCCAATGTTGTCTCTGAATCTTGTTGGATCCGGAACCTTCTCTTGGAACTCCATTGCCCAATTCCTAAAGCTACCTTAGTGCATTGTGATAATATTAGTGCAATATACCTCTCTGGTAATCCTGTTCAACATCAACGCACTAAGCATATTGAAATGGACATTCACTTTGTTCGTGAAAAAGTTTCCCGTGGACAAGTCCGTGTTCTTCATGTTCCATCTCGTTATCAAATTGCCGACATCTTCACGAAAGGTCTTCCGCGCATACTATTTGAAGATTTCAGAGACAGTCTCAGCATACGGCGGCCTCCCGCTTCGACTGCGGGGGTGTGTTAGAATACAGCAAGAGTTGATCACATTTATTATTCATCATTGTGTAAATAATTATAGTTAATTGTACAATAACTATTCATCATTGTGTAAATAATTATAGTTAATTGTACAATAACTCCCACCTTAATTGGAGTTAATGTATTGTTGTATATATGTTTGCCAAATCAATGAGAATAGACAGGCAGTATAATTCTTACATGATATTGTTAATGTTTTTTTAATGTTTTTTTAGTTTAGATTGGAAAATTTTGGACATTCATCTATTTTAGGGTTTACATGATATTGTTAATGCTCTTCTCATAGTGAATATGAAGAGTTGTTTTTGAAACTTTAAATGTGTTGTGATGTTAGTGTATTGAACTATTTGTTGGAAGGAACTGTGTTTGTAATGAATGTGAGGGTTATGAGTGCAGGCAAGAAGGGCTTTGAGGGCATTGAAGGCAGTGGTGAGGATTCAAGCACTTGTCAGGGGTAGACAAGTGAGGAAGCAAGCTGCAGTGACATTAAGGTGCATGCAGGCATTAGTTCGTGTTCAAGCTCGAGTAAGAGCTCGTCGTGTGAGGATGTCTATGGAGGGACAAGCCGTGCAGAATATGCTTAATGAACGACGCAGCAAACTTGAACTTTTGAAGGAAGCAGAGGTATGTGTTGTGAATTGACAGTGGAAACTTTATCTAGTTTTAGTTTTTGTTATGTCTAAGAATTTTATTTTGTGAATCTGCAGGAAGGGTGGTGTGATAGCATAGGAACATTGGAAGATGTTAAATCAAAAATTCAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGGGCACTTGCATACTCACTTGCTCAGAAGGTAACAAATTAAGTTAGTGAGTCTCTTCAGTCCTGAGTGAGGCGTCGTCAATTAGTCCCTCAAATTTGTTATTTTTTAATCATATTAGTCCTTTCAAATTGTTCAATTTAGTCTCTGAAATTGTCTATGAATTTTCAAATCATGGATAATTTGAAATTTCGTTAGAGGATCAAGTTTAAGTTGCCCTACAACTTTAGGAACTAATAAATTGTTTATTCATTCAAACATAGTGGAAAGTAGAAACAGTTTCCACCTTTTTCTTTTTCTTTCCTTTCTACAAAGAAAGATGCTTATATTTTGAGATTTCCAGCAATGCAGGCCAACCTCAAGCACTAATTCGCGAACCAACACCTCATTTTCCACTCTCCGGAATCACGAGATGAACAAAGCTAATGGGGGATGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCTTGGGAGACTAGATTGATGGAACAGTCTCACGCCGAGAGCTTAGAAAAAACCCCACCGCCACCTCCAAAGAAATTTGCAGAACCCTTTGTAAGCTCGAATTTGAAACCATGCTCGGTCAAAGTCAAAAAGAACAATGTCACAACAAGGATTTCCGCTAAGCCTCCTCCCCATATTGGACAAGCTACTCGTTCATCGTCAAGTCCAAGTTCCGAGTTTCGGTACGATGAGAGTTCTGCATCATCTTCTATTTGTACATCCACAACTCCAATGTCAGGGAACACTTGTGAAAGGACCGAGGATAGTTGTAACAGCACTAGGCCAAATTACATGAACCTGACTCAATCAACCAAGGCAAAGCTAAAATCGGGTAGTAATCAAATGTATAACAGAGCTCAAAGGCAACAGTCAATGGATGAGTTTCAATTTATGAAGAGGGCTGCAGTTTTCTCCAACGGAGATTCTAAAAGCATAGCTGCTTCTGATCATTCACTCAACTTTTCTAGGCCACTTCACCTACCAACCCAATCGGACAAGAGCTCGGTGAGACCATGGTGA

Protein sequence

>MS.gene37415.t1

MGASGKWVKALIGFKKPDKDEQHVKEGGKSKKWRLWRSSSGDNSSWKGFKTNHHKAASEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLELLKEAEEGWCDSIGTLEDVKSKIQMRQEGAFKRERALAYSLAQKQCRPTSSTNSRTNTSFSTLRNHEMNKANGGWSWLERWMAAKPWETRLMEQSHAESLEKTPPPPPKKFAEPFVSSNLKPCSVKVKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCERTEDSCNSTRPNYMNLTQSTKAKLKSGSNQMYNRAQRQQSMDEFQFMKRAAVFSNGDSKSIAASDHSLNFSRPLHLPTQSDKSSVRPW