Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37574.t1 | PNX72657.1 | 76.5 | 170 | 39 | 1 | 13 | 182 | 51 | 219 | 2.30E-60 | 241.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37574.t1 | P30183 | 52.0 | 173 | 75 | 3 | 12 | 182 | 88 | 254 | 2.2e-38 | 160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37574.t1 | A0A2K3L284 | 76.5 | 170 | 39 | 1 | 13 | 182 | 51 | 219 | 1.7e-60 | 241.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37574 | MS.gene048913 | PPI |
| MS.gene37574 | MS.gene46805 | PPI |
| MS.gene019336 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene00063 | PPI |
| MS.gene04541 | MS.gene37574 | PPI |
| MS.gene016544 | MS.gene37574 | PPI |
| MS.gene06057 | MS.gene37574 | PPI |
| MS.gene016703 | MS.gene37574 | PPI |
| MS.gene61084 | MS.gene37574 | PPI |
| MS.gene79044 | MS.gene37574 | PPI |
| MS.gene82304 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene04020 | PPI |
| MS.gene28739 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene028366 | PPI |
| MS.gene55900 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene063809 | PPI |
| MS.gene37574 | MS.gene24450 | PPI |
| MS.gene00474 | MS.gene37574 | PPI |
| MS.gene04501 | MS.gene37574 | PPI |
| MS.gene67884 | MS.gene37574 | PPI |
| MS.gene36424 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene55782 | PPI |
| MS.gene60448 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene044085 | PPI |
| MS.gene23576 | MS.gene37574 | PPI |
| MS.gene35086 | MS.gene37574 | PPI |
| MS.gene37574 | MS.gene00478 | PPI |
| MS.gene88440 | MS.gene37574 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37574.t1 | MTR_5g088980 | 70.950 | 179 | 52 | 0 | 4 | 182 | 76 | 254 | 4.78e-84 | 254 |
| MS.gene37574.t1 | MTR_7g089080 | 50.279 | 179 | 85 | 3 | 5 | 182 | 113 | 288 | 7.75e-49 | 169 |
| MS.gene37574.t1 | MTR_5g023790 | 46.903 | 113 | 59 | 1 | 71 | 182 | 150 | 262 | 3.05e-30 | 113 |
| MS.gene37574.t1 | MTR_5g023790 | 46.903 | 113 | 59 | 1 | 71 | 182 | 150 | 262 | 5.30e-30 | 113 |
| MS.gene37574.t1 | MTR_5g023790 | 46.903 | 113 | 59 | 1 | 71 | 182 | 150 | 262 | 7.22e-30 | 113 |
| MS.gene37574.t1 | MTR_8g074000 | 44.545 | 110 | 60 | 1 | 74 | 182 | 157 | 266 | 1.31e-27 | 107 |
| MS.gene37574.t1 | MTR_1g011470 | 40.945 | 127 | 68 | 4 | 58 | 182 | 131 | 252 | 9.68e-22 | 91.3 |
| MS.gene37574.t1 | MTR_3g088415 | 39.130 | 138 | 72 | 4 | 56 | 182 | 195 | 331 | 2.62e-21 | 90.1 |
| MS.gene37574.t1 | MTR_3g088415 | 39.130 | 138 | 72 | 4 | 56 | 182 | 195 | 331 | 4.31e-21 | 90.1 |
| MS.gene37574.t1 | MTR_3g088415 | 39.130 | 138 | 72 | 4 | 56 | 182 | 195 | 331 | 4.71e-21 | 89.7 |
| MS.gene37574.t1 | MTR_3g107970 | 42.593 | 108 | 59 | 3 | 77 | 182 | 198 | 304 | 9.24e-21 | 89.0 |
| MS.gene37574.t1 | MTR_2g102520 | 40.458 | 131 | 68 | 4 | 61 | 182 | 177 | 306 | 1.34e-19 | 85.5 |
| MS.gene37574.t1 | MTR_3g102520 | 40.566 | 106 | 59 | 2 | 81 | 182 | 79 | 184 | 3.19e-18 | 81.3 |
| MS.gene37574.t1 | MTR_3g102530 | 40.566 | 106 | 59 | 1 | 81 | 182 | 72 | 177 | 1.01e-17 | 79.7 |
| MS.gene37574.t1 | MTR_2g102550 | 37.037 | 135 | 79 | 4 | 53 | 182 | 125 | 258 | 2.99e-17 | 79.0 |
| MS.gene37574.t1 | MTR_1g018680 | 41.748 | 103 | 55 | 3 | 84 | 182 | 83 | 184 | 3.26e-17 | 78.2 |
| MS.gene37574.t1 | MTR_3g102510 | 44.565 | 92 | 49 | 2 | 93 | 182 | 74 | 165 | 6.60e-17 | 77.4 |
| MS.gene37574.t1 | MTR_3g060770 | 37.719 | 114 | 63 | 3 | 76 | 184 | 13 | 123 | 7.57e-17 | 76.6 |
| MS.gene37574.t1 | MTR_3g088405 | 37.963 | 108 | 64 | 3 | 77 | 182 | 228 | 334 | 1.15e-16 | 77.4 |
| MS.gene37574.t1 | MTR_3g061680 | 40.196 | 102 | 55 | 2 | 86 | 184 | 15 | 113 | 2.37e-16 | 75.1 |
| MS.gene37574.t1 | MTR_3g060400 | 40.206 | 97 | 52 | 2 | 91 | 184 | 26 | 119 | 1.47e-15 | 73.2 |
| MS.gene37574.t1 | MTR_3g460990 | 40.206 | 97 | 52 | 2 | 91 | 184 | 26 | 119 | 1.47e-15 | 73.2 |
| MS.gene37574.t1 | MTR_3g060820 | 38.614 | 101 | 56 | 2 | 87 | 184 | 16 | 113 | 6.09e-15 | 71.2 |
| MS.gene37574.t1 | MTR_5g011900 | 37.273 | 110 | 68 | 1 | 75 | 183 | 52 | 161 | 1.37e-14 | 69.7 |
| MS.gene37574.t1 | MTR_5g088940 | 55.738 | 61 | 8 | 1 | 114 | 174 | 1 | 42 | 3.94e-14 | 64.3 |
| MS.gene37574.t1 | MTR_6g045270 | 38.542 | 96 | 53 | 2 | 92 | 184 | 45 | 137 | 1.18e-12 | 65.1 |
| MS.gene37574.t1 | MTR_2g005960 | 32.000 | 125 | 70 | 4 | 73 | 182 | 102 | 226 | 1.48e-12 | 63.9 |
| MS.gene37574.t1 | MTR_3g102560 | 47.222 | 72 | 37 | 1 | 112 | 182 | 86 | 157 | 5.78e-12 | 63.2 |
| MS.gene37574.t1 | MTR_3g060410 | 44.118 | 68 | 35 | 1 | 120 | 184 | 131 | 198 | 9.81e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37574.t1 | AT2G26760 | 49.704 | 169 | 75 | 3 | 14 | 182 | 61 | 219 | 3.56e-47 | 158 |
| MS.gene37574.t1 | AT4G37490 | 51.429 | 175 | 73 | 3 | 12 | 182 | 88 | 254 | 1.10e-46 | 158 |
| MS.gene37574.t1 | AT5G06150 | 47.222 | 180 | 91 | 2 | 5 | 182 | 94 | 271 | 3.78e-45 | 152 |
| MS.gene37574.t1 | AT5G06150 | 47.222 | 180 | 91 | 2 | 5 | 182 | 94 | 271 | 3.66e-44 | 152 |
| MS.gene37574.t1 | AT3G11520 | 47.368 | 171 | 68 | 4 | 14 | 182 | 98 | 248 | 4.16e-39 | 137 |
| MS.gene37574.t1 | AT3G11520 | 47.059 | 170 | 70 | 4 | 14 | 182 | 98 | 248 | 5.16e-39 | 137 |
| MS.gene37574.t1 | AT1G76310 | 48.673 | 113 | 56 | 2 | 72 | 182 | 156 | 268 | 4.02e-31 | 115 |
| MS.gene37574.t1 | AT1G34460 | 43.284 | 134 | 73 | 1 | 36 | 169 | 215 | 345 | 5.82e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 43.284 | 134 | 73 | 1 | 36 | 169 | 215 | 345 | 5.82e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 201 | 334 | 5.86e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.15e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.45e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.48e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.48e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.48e-31 | 117 |
| MS.gene37574.t1 | AT1G34460 | 42.537 | 134 | 77 | 0 | 36 | 169 | 215 | 348 | 6.48e-31 | 117 |
| MS.gene37574.t1 | AT1G76310 | 48.673 | 113 | 56 | 2 | 72 | 182 | 156 | 268 | 1.28e-30 | 115 |
| MS.gene37574.t1 | AT1G76310 | 48.673 | 113 | 56 | 2 | 72 | 182 | 156 | 268 | 1.70e-30 | 115 |
| MS.gene37574.t1 | AT1G76310 | 48.673 | 113 | 56 | 2 | 72 | 182 | 156 | 268 | 2.35e-30 | 115 |
| MS.gene37574.t1 | AT1G20610 | 44.144 | 111 | 61 | 1 | 73 | 182 | 157 | 267 | 3.81e-29 | 111 |
| MS.gene37574.t1 | AT4G35620 | 50.926 | 108 | 52 | 1 | 76 | 182 | 155 | 262 | 7.74e-23 | 94.0 |
| MS.gene37574.t1 | AT4G35620 | 50.926 | 108 | 52 | 1 | 76 | 182 | 155 | 262 | 9.99e-23 | 94.4 |
| MS.gene37574.t1 | AT1G44110 | 43.119 | 109 | 59 | 3 | 76 | 182 | 178 | 285 | 1.86e-22 | 93.6 |
| MS.gene37574.t1 | AT1G16330 | 42.574 | 101 | 57 | 1 | 83 | 182 | 385 | 485 | 5.75e-22 | 92.8 |
| MS.gene37574.t1 | AT2G17620 | 47.368 | 114 | 59 | 1 | 70 | 182 | 148 | 261 | 1.05e-21 | 91.3 |
| MS.gene37574.t1 | AT5G43080 | 38.158 | 152 | 90 | 4 | 34 | 182 | 28 | 178 | 1.56e-21 | 90.1 |
| MS.gene37574.t1 | AT1G77390 | 43.119 | 109 | 59 | 3 | 76 | 182 | 162 | 269 | 1.66e-21 | 90.9 |
| MS.gene37574.t1 | AT5G43080 | 38.158 | 152 | 90 | 4 | 34 | 182 | 28 | 178 | 1.90e-21 | 90.1 |
| MS.gene37574.t1 | AT1G47220 | 36.774 | 155 | 86 | 4 | 34 | 184 | 5 | 151 | 5.13e-21 | 88.6 |
| MS.gene37574.t1 | AT1G80370 | 43.220 | 118 | 64 | 3 | 67 | 182 | 172 | 288 | 8.49e-21 | 89.0 |
| MS.gene37574.t1 | AT1G47230 | 37.226 | 137 | 81 | 3 | 50 | 182 | 53 | 188 | 1.39e-20 | 87.8 |
| MS.gene37574.t1 | AT1G47210 | 34.320 | 169 | 93 | 5 | 20 | 182 | 39 | 195 | 1.76e-20 | 87.4 |
| MS.gene37574.t1 | AT5G11300 | 40.000 | 125 | 72 | 3 | 60 | 182 | 140 | 263 | 4.31e-20 | 87.0 |
| MS.gene37574.t1 | AT5G11300 | 40.000 | 125 | 72 | 3 | 60 | 182 | 140 | 263 | 4.67e-20 | 86.7 |
| MS.gene37574.t1 | AT1G47210 | 35.664 | 143 | 76 | 4 | 41 | 179 | 62 | 192 | 1.46e-19 | 82.0 |
| MS.gene37574.t1 | AT1G47230 | 36.957 | 138 | 81 | 4 | 50 | 182 | 53 | 189 | 5.89e-19 | 83.2 |
| MS.gene37574.t1 | AT5G25380 | 39.450 | 109 | 63 | 3 | 76 | 182 | 157 | 264 | 9.25e-18 | 80.1 |
| MS.gene37574.t1 | AT5G25380 | 39.450 | 109 | 63 | 3 | 76 | 182 | 163 | 270 | 9.55e-18 | 80.1 |
| MS.gene37574.t1 | AT5G25380 | 39.450 | 109 | 63 | 3 | 76 | 182 | 157 | 264 | 1.05e-17 | 80.1 |
| MS.gene37574.t1 | AT5G25380 | 39.450 | 109 | 63 | 3 | 76 | 182 | 157 | 264 | 1.05e-17 | 80.1 |
| MS.gene37574.t1 | AT1G15570 | 42.593 | 108 | 59 | 3 | 77 | 182 | 173 | 279 | 3.93e-17 | 78.6 |
Find 27 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGTCAGATAGAAAGTTTC+TGG | 0.200703 | 5.4:+70070704 | None:intergenic |
| CTCCTCTTAGCCGTTATATC+TGG | 0.320074 | 5.4:+70070779 | None:intergenic |
| TTAGCACCTTGTGATGCATT+TGG | 0.341745 | 5.4:+70071446 | None:intergenic |
| AGAGAGGAATTTCAACTTGT+TGG | 0.397326 | 5.4:-70070641 | MS.gene37574:CDS |
| AATTACTGAACTACAAGCTT+TGG | 0.414807 | 5.4:+70071198 | None:intergenic |
| TGCTGATAAGGATAATGAAT+TGG | 0.420062 | 5.4:-70071005 | MS.gene37574:CDS |
| AGTAATTTCAGCTAGAAGAA+AGG | 0.442539 | 5.4:-70071182 | MS.gene37574:intron |
| ACAAGCTTTGGCATTTCTCC+TGG | 0.456328 | 5.4:+70071210 | None:intergenic |
| ACAAGTTGAAATTCCTCTCT+AGG | 0.464310 | 5.4:+70070644 | None:intergenic |
| GAACATTGATACTGCTGATA+AGG | 0.486849 | 5.4:-70071017 | MS.gene37574:CDS |
| TGTCAAATTCAGGCTTCTTG+TGG | 0.503060 | 5.4:-70071064 | MS.gene37574:intron |
| GGCTTCACAGCCAGATATAA+CGG | 0.509060 | 5.4:-70070789 | MS.gene37574:CDS |
| GGAGATCAATTCTTGTTGAC+TGG | 0.513087 | 5.4:-70070760 | MS.gene37574:CDS |
| TGTACGAGTACATGATTACA+TGG | 0.521386 | 5.4:-70070810 | MS.gene37574:CDS |
| GAGCTGATGACAATAACTTC+AGG | 0.522150 | 5.4:+70071301 | None:intergenic |
| AGCTTTGGCATTTCTCCTGG+TGG | 0.529215 | 5.4:+70071213 | None:intergenic |
| ACAATAACTTCAGGTACTGT+AGG | 0.532942 | 5.4:+70071310 | None:intergenic |
| TGACTCTTAATATTGTTGAC+CGG | 0.533961 | 5.4:-70070688 | MS.gene37574:CDS |
| GATCAATTCTTGTTGACTGG+TGG | 0.548572 | 5.4:-70070757 | MS.gene37574:CDS |
| CAAGTTGAAATTCCTCTCTA+GGG | 0.572482 | 5.4:+70070645 | None:intergenic |
| TGAAGAATATGCGGAAGTGA+AGG | 0.574870 | 5.4:-70071275 | MS.gene37574:CDS |
| TTCTTGTGGAATTGTGCTAG+AGG | 0.585996 | 5.4:-70071050 | MS.gene37574:CDS |
| AGCCAGATATAACGGCTAAG+AGG | 0.588033 | 5.4:-70070781 | MS.gene37574:CDS |
| CACAAAAGCTGTCCCTAGAG+AGG | 0.594294 | 5.4:-70070657 | MS.gene37574:CDS |
| CAGCTCAGATGAAGAATATG+CGG | 0.656465 | 5.4:-70071284 | MS.gene37574:CDS |
| ATGTTTCCAAATGCATCACA+AGG | 0.671375 | 5.4:-70071452 | MS.gene37574:intron |
| ATTTAAGAGAAAGATCCACC+AGG | 0.681917 | 5.4:-70071228 | MS.gene37574:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAATTAGACA+TGG | + | chr5.4:70070684-70070703 | None:intergenic | 10.0% |
| !! | ATATGAGAAATAGAAAATAA+TGG | + | chr5.4:70070906-70070925 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTGTTTTGTTGC+AGG | - | chr5.4:70070696-70070715 | MS.gene37574:CDS | 20.0% |
| ! | TAGTTTCTTTCTTTCTTTGT+TGG | - | chr5.4:70071182-70071201 | MS.gene37574:intron | 25.0% |
| ! | TTGAATTTCATGAATGACTT+AGG | - | chr5.4:70071219-70071238 | MS.gene37574:CDS | 25.0% |
| !! | TCTATTTCTCATATGTGATA+TGG | - | chr5.4:70070912-70070931 | MS.gene37574:intron | 25.0% |
| AATTACTGAACTACAAGCTT+TGG | + | chr5.4:70070861-70070880 | None:intergenic | 30.0% | |
| AGTAATTTCAGCTAGAAGAA+AGG | - | chr5.4:70070874-70070893 | MS.gene37574:intron | 30.0% | |
| CATGGAAATAGATAAACATG+AGG | + | chr5.4:70070666-70070685 | None:intergenic | 30.0% | |
| GAACAATGTTTGTCAAATTC+AGG | - | chr5.4:70070982-70071001 | MS.gene37574:CDS | 30.0% | |
| TGACTCTTAATATTGTTGAC+CGG | - | chr5.4:70071368-70071387 | MS.gene37574:intron | 30.0% | |
| TGCTGATAAGGATAATGAAT+TGG | - | chr5.4:70071051-70071070 | MS.gene37574:CDS | 30.0% | |
| ! | GTGATATGGTTTTCGATTTA+GGG | - | chr5.4:70070926-70070945 | MS.gene37574:intron | 30.0% |
| ! | TGTGATATGGTTTTCGATTT+AGG | - | chr5.4:70070925-70070944 | MS.gene37574:intron | 30.0% |
| !! | TAGGGTTCTATTTTTCAATG+TGG | - | chr5.4:70070944-70070963 | MS.gene37574:intron | 30.0% |
| AGAGAGGAATTTCAACTTGT+TGG | - | chr5.4:70071415-70071434 | MS.gene37574:intron | 35.0% | |
| AGAGTCAGATAGAAAGTTTC+TGG | + | chr5.4:70071355-70071374 | None:intergenic | 35.0% | |
| ATGTTTCCAAATGCATCACA+AGG | - | chr5.4:70070604-70070623 | MS.gene37574:CDS | 35.0% | |
| ATTTAAGAGAAAGATCCACC+AGG | - | chr5.4:70070828-70070847 | MS.gene37574:intron | 35.0% | |
| GAACATTGATACTGCTGATA+AGG | - | chr5.4:70071039-70071058 | MS.gene37574:CDS | 35.0% | |
| TGTACGAGTACATGATTACA+TGG | - | chr5.4:70071246-70071265 | MS.gene37574:CDS | 35.0% | |
| ! | ACAAGTTGAAATTCCTCTCT+AGG | + | chr5.4:70071415-70071434 | None:intergenic | 35.0% |
| ! | ACAATAACTTCAGGTACTGT+AGG | + | chr5.4:70070749-70070768 | None:intergenic | 35.0% |
| ! | CAAGTTGAAATTCCTCTCTA+GGG | + | chr5.4:70071414-70071433 | None:intergenic | 35.0% |
| CAGCTCAGATGAAGAATATG+CGG | - | chr5.4:70070772-70070791 | MS.gene37574:CDS | 40.0% | |
| GAGCTGATGACAATAACTTC+AGG | + | chr5.4:70070758-70070777 | None:intergenic | 40.0% | |
| GGAGATCAATTCTTGTTGAC+TGG | - | chr5.4:70071296-70071315 | MS.gene37574:CDS | 40.0% | |
| TGAAGAATATGCGGAAGTGA+AGG | - | chr5.4:70070781-70070800 | MS.gene37574:CDS | 40.0% | |
| TGTCAAATTCAGGCTTCTTG+TGG | - | chr5.4:70070992-70071011 | MS.gene37574:CDS | 40.0% | |
| TTAGCACCTTGTGATGCATT+TGG | + | chr5.4:70070613-70070632 | None:intergenic | 40.0% | |
| TTCTTGTGGAATTGTGCTAG+AGG | - | chr5.4:70071006-70071025 | MS.gene37574:CDS | 40.0% | |
| ! | GATCAATTCTTGTTGACTGG+TGG | - | chr5.4:70071299-70071318 | MS.gene37574:CDS | 40.0% |
| ! | TTTTGTTGCAGGACTCACTT+AGG | - | chr5.4:70070707-70070726 | MS.gene37574:CDS | 40.0% |
| !! | CGCTTTTTACAAACTCTCTG+AGG | - | chr5.4:70071102-70071121 | MS.gene37574:intron | 40.0% |
| AGCCAGATATAACGGCTAAG+AGG | - | chr5.4:70071275-70071294 | MS.gene37574:CDS | 45.0% | |
| CTCCTCTTAGCCGTTATATC+TGG | + | chr5.4:70071280-70071299 | None:intergenic | 45.0% | |
| GGCTTCACAGCCAGATATAA+CGG | - | chr5.4:70071267-70071286 | MS.gene37574:CDS | 45.0% | |
| ! | ACAAGCTTTGGCATTTCTCC+TGG | + | chr5.4:70070849-70070868 | None:intergenic | 45.0% |
| ! | CAGCTTTTGTGGACAAGAAC+CGG | + | chr5.4:70071390-70071409 | None:intergenic | 45.0% |
| CACAAAAGCTGTCCCTAGAG+AGG | - | chr5.4:70071399-70071418 | MS.gene37574:intron | 50.0% | |
| ! | AGCTTTGGCATTTCTCCTGG+TGG | + | chr5.4:70070846-70070865 | None:intergenic | 50.0% |
| !! | CTCTCTAGGGACAGCTTTTG+TGG | + | chr5.4:70071401-70071420 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 70070598 | 70071480 | 70070598 | ID=MS.gene37574 |
| chr5.4 | mRNA | 70070598 | 70071480 | 70070598 | ID=MS.gene37574.t1;Parent=MS.gene37574 |
| chr5.4 | exon | 70071453 | 70071480 | 70071453 | ID=MS.gene37574.t1.exon1;Parent=MS.gene37574.t1 |
| chr5.4 | CDS | 70071453 | 70071480 | 70071453 | ID=cds.MS.gene37574.t1;Parent=MS.gene37574.t1 |
| chr5.4 | exon | 70071183 | 70071349 | 70071183 | ID=MS.gene37574.t1.exon2;Parent=MS.gene37574.t1 |
| chr5.4 | CDS | 70071183 | 70071349 | 70071183 | ID=cds.MS.gene37574.t1;Parent=MS.gene37574.t1 |
| chr5.4 | exon | 70070955 | 70071074 | 70070955 | ID=MS.gene37574.t1.exon3;Parent=MS.gene37574.t1 |
| chr5.4 | CDS | 70070955 | 70071074 | 70070955 | ID=cds.MS.gene37574.t1;Parent=MS.gene37574.t1 |
| chr5.4 | exon | 70070598 | 70070837 | 70070598 | ID=MS.gene37574.t1.exon4;Parent=MS.gene37574.t1 |
| chr5.4 | CDS | 70070598 | 70070837 | 70070598 | ID=cds.MS.gene37574.t1;Parent=MS.gene37574.t1 |
| Gene Sequence |
| Protein sequence |
