Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04020.t1 | XP_013460204.1 | 97.1 | 486 | 10 | 1 | 1 | 482 | 1 | 486 | 7.80E-265 | 922.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04020.t1 | Q8W032 | 59.8 | 488 | 162 | 9 | 8 | 481 | 37 | 504 | 1.5e-152 | 540.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04020.t1 | A0A072V7S0 | 97.1 | 486 | 10 | 1 | 1 | 482 | 1 | 486 | 5.6e-265 | 922.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene36485 | MS.gene04020 | PPI |
| MS.gene08109 | MS.gene04020 | PPI |
| MS.gene066552 | MS.gene04020 | PPI |
| MS.gene016938 | MS.gene04020 | PPI |
| MS.gene07051 | MS.gene04020 | PPI |
| MS.gene072702 | MS.gene04020 | PPI |
| MS.gene78156 | MS.gene04020 | PPI |
| MS.gene67108 | MS.gene04020 | PPI |
| MS.gene24383 | MS.gene04020 | PPI |
| MS.gene04541 | MS.gene04020 | PPI |
| MS.gene37574 | MS.gene04020 | PPI |
| MS.gene071261 | MS.gene04020 | PPI |
| MS.gene058013 | MS.gene04020 | PPI |
| MS.gene04418 | MS.gene04020 | PPI |
| MS.gene001968 | MS.gene04020 | PPI |
| MS.gene023147 | MS.gene04020 | PPI |
| MS.gene062778 | MS.gene04020 | PPI |
| MS.gene22500 | MS.gene04020 | PPI |
| MS.gene05640 | MS.gene04020 | PPI |
| MS.gene044021 | MS.gene04020 | PPI |
| MS.gene021870 | MS.gene04020 | PPI |
| MS.gene35150 | MS.gene04020 | PPI |
| MS.gene028307 | MS.gene04020 | PPI |
| MS.gene04501 | MS.gene04020 | PPI |
| MS.gene066551 | MS.gene04020 | PPI |
| MS.gene47008 | MS.gene04020 | PPI |
| MS.gene003428 | MS.gene04020 | PPI |
| MS.gene28807 | MS.gene04020 | PPI |
| MS.gene04079 | MS.gene04020 | PPI |
| MS.gene045765 | MS.gene04020 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04020.t1 | MTR_3g463490 | 97.119 | 486 | 10 | 1 | 1 | 482 | 1 | 486 | 0.0 | 969 |
| MS.gene04020.t1 | MTR_3g463490 | 96.862 | 478 | 11 | 1 | 1 | 474 | 1 | 478 | 0.0 | 946 |
| MS.gene04020.t1 | MTR_8g099640 | 30.451 | 266 | 171 | 6 | 76 | 331 | 493 | 754 | 7.95e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04020.t1 | AT1G07270 | 59.836 | 488 | 162 | 9 | 8 | 481 | 37 | 504 | 0.0 | 573 |
| MS.gene04020.t1 | AT2G29680 | 60.381 | 472 | 165 | 6 | 14 | 481 | 54 | 507 | 0.0 | 569 |
| MS.gene04020.t1 | AT2G29680 | 56.660 | 503 | 165 | 7 | 14 | 481 | 54 | 538 | 0.0 | 552 |
| MS.gene04020.t1 | AT1G07270 | 59.020 | 449 | 150 | 9 | 8 | 442 | 37 | 465 | 7.70e-180 | 512 |
| MS.gene04020.t1 | AT4G14700 | 31.321 | 265 | 168 | 7 | 72 | 328 | 417 | 675 | 2.18e-29 | 122 |
| MS.gene04020.t1 | AT4G12620 | 26.816 | 358 | 221 | 10 | 72 | 419 | 422 | 748 | 2.47e-25 | 110 |
Find 100 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAAGTTGCTGCAGCTTC+TGG | 0.191734 | 3.3:-50954388 | MS.gene04020:CDS |
| AATATCACCTTCATCTAGTT+TGG | 0.232074 | 3.3:+50952974 | None:intergenic |
| TGAAAGCAAATTTACTCAAT+TGG | 0.268004 | 3.3:-50956338 | MS.gene04020:CDS |
| AACTGGTGATCTATATGTTT+TGG | 0.276950 | 3.3:+50953361 | None:intergenic |
| ATAAGAATACATCTGGAAAA+TGG | 0.277793 | 3.3:+50955166 | None:intergenic |
| GCCAAGGATTGAGTCTTTCT+TGG | 0.309468 | 3.3:+50953265 | None:intergenic |
| GGGATTGTCCTAGTTTAATA+AGG | 0.315431 | 3.3:+50953024 | None:intergenic |
| TTTACCTTTGGGGTTCCATT+TGG | 0.317882 | 3.3:+50956772 | None:intergenic |
| TGCTTGCAATTTGAATGCTT+TGG | 0.345235 | 3.3:-50953996 | MS.gene04020:CDS |
| TCAATGTTATGGCAGATACT+TGG | 0.369583 | 3.3:-50955493 | MS.gene04020:intron |
| ACATAAAACCCTGGGGAAAA+CGG | 0.372908 | 3.3:-50955467 | MS.gene04020:CDS |
| CCGGGTAGGGGTGGTCGGGA+TGG | 0.381879 | 3.3:+50956910 | None:intergenic |
| CGGGTAGGGGTGGTCGGGAT+GGG | 0.388704 | 3.3:+50956911 | None:intergenic |
| GGTGGTCGGGATGGGTGTGG+CGG | 0.393605 | 3.3:+50956919 | None:intergenic |
| ATATGTGGCTGTCCTGGAAC+TGG | 0.401759 | 3.3:-50956384 | MS.gene04020:CDS |
| ATGGAGCACAGCTCTGTCTT+TGG | 0.404599 | 3.3:+50955213 | None:intergenic |
| CTCTTCTCAATTTATCATCT+CGG | 0.404980 | 3.3:+50953003 | None:intergenic |
| GAAAGCAAATTTACTCAATT+GGG | 0.407021 | 3.3:-50956337 | MS.gene04020:CDS |
| ATTTCCGGGTAGGGGTGGTC+GGG | 0.407770 | 3.3:+50956906 | None:intergenic |
| CATAAAACCCTGGGGAAAAC+GGG | 0.408902 | 3.3:-50955466 | MS.gene04020:CDS |
| ACCCTGGGGAAAACGGGTTC+AGG | 0.408996 | 3.3:-50955460 | MS.gene04020:CDS |
| GATTTCCGGGTAGGGGTGGT+CGG | 0.415973 | 3.3:+50956905 | None:intergenic |
| TTTACCTATAAGAATACATC+TGG | 0.416030 | 3.3:+50955159 | None:intergenic |
| TCTTCTCAATTTATCATCTC+GGG | 0.421882 | 3.3:+50953004 | None:intergenic |
| CTGCATCTCTTAAATCCAAA+TGG | 0.426211 | 3.3:-50956787 | MS.gene04020:CDS |
| ATATCACCTTCATCTAGTTT+GGG | 0.428146 | 3.3:+50952975 | None:intergenic |
| CTGCAGGGCCTTATTAAACT+AGG | 0.430579 | 3.3:-50953032 | MS.gene04020:intron |
| CTTTATATATGTGGCTGTCC+TGG | 0.432935 | 3.3:-50956390 | MS.gene04020:CDS |
| AGGGGTGGTCGGGATGGGTG+TGG | 0.434061 | 3.3:+50956916 | None:intergenic |
| TCACGACACACCATCGTAGA+TGG | 0.434419 | 3.3:+50956477 | None:intergenic |
| GTGGTCGGGATGGGTGTGGC+GGG | 0.444356 | 3.3:+50956920 | None:intergenic |
| GCAGGTAAGGATTGATCATA+TGG | 0.450580 | 3.3:-50953396 | MS.gene04020:intron |
| TTGTAGATGGGGAGCAAATG+AGG | 0.459170 | 3.3:-50956533 | MS.gene04020:intron |
| CAATTTACAGATAGAACATT+GGG | 0.464654 | 3.3:+50955641 | None:intergenic |
| GACTGATGAGGTGACTGAAT+TGG | 0.466821 | 3.3:+50956856 | None:intergenic |
| CGTTTAGAAGATGCAATTGA+AGG | 0.467208 | 3.3:+50956956 | None:intergenic |
| GTGCAGAGTGTTAAATGATC+AGG | 0.470745 | 3.3:-50953165 | MS.gene04020:intron |
| CATTTGGATTTAAGAGATGC+AGG | 0.470958 | 3.3:+50956788 | None:intergenic |
| TTGCAGAGATGCAACGGCGG+GGG | 0.472950 | 3.3:+50956882 | None:intergenic |
| TACTTAAGATTATTCAAGAA+AGG | 0.473235 | 3.3:-50954771 | MS.gene04020:CDS |
| GACAACGATTTCCCAGTTCC+AGG | 0.478633 | 3.3:+50956372 | None:intergenic |
| AGTTGCAGAGATGCAACGGC+GGG | 0.480036 | 3.3:+50956880 | None:intergenic |
| TCTTACATCATGTTCGATGT+AGG | 0.481162 | 3.3:+50955394 | None:intergenic |
| GAAGAGCAAAATGTGGTGTT+GGG | 0.482208 | 3.3:-50956453 | MS.gene04020:CDS |
| CAATTTAATGCAGTAAGCCT+TGG | 0.483021 | 3.3:+50954995 | None:intergenic |
| ACTGATGAGGTGACTGAATT+GGG | 0.484631 | 3.3:+50956857 | None:intergenic |
| GATTGTATGGTATCCACAAC+TGG | 0.488911 | 3.3:+50953344 | None:intergenic |
| AAGTTCTGAAGTTGCTGTAA+AGG | 0.489917 | 3.3:+50955433 | None:intergenic |
| AAGCATTGGAACTATGTGCC+AGG | 0.493882 | 3.3:-50954512 | MS.gene04020:CDS |
| GAAAATTCCATGATTCCAGC+AGG | 0.495615 | 3.3:+50953194 | None:intergenic |
| GCCAAGAAAGACTCAATCCT+TGG | 0.501996 | 3.3:-50953266 | MS.gene04020:CDS |
| TAGCTGATCGATTTCTTCCA+AGG | 0.509008 | 3.3:-50955012 | MS.gene04020:CDS |
| CAATGTTATGGCAGATACTT+GGG | 0.510081 | 3.3:-50955492 | MS.gene04020:intron |
| ATGATGTGGCAGAGATTGTA+TGG | 0.514538 | 3.3:+50953331 | None:intergenic |
| TGGTAAGCATGAAAAGATCA+TGG | 0.521734 | 3.3:+50955194 | None:intergenic |
| ACAAAATCTTCCTACAGCAC+TGG | 0.524359 | 3.3:-50953954 | MS.gene04020:CDS |
| ACTGACTGACTTTACCTTTG+GGG | 0.527720 | 3.3:+50956762 | None:intergenic |
| GGAAGAGCAAAATGTGGTGT+TGG | 0.527876 | 3.3:-50956454 | MS.gene04020:CDS |
| ATAGTTCCAATGCTTGATGT+TGG | 0.531773 | 3.3:+50954520 | None:intergenic |
| CTTGGGTTACATAAAACCCT+GGG | 0.535443 | 3.3:-50955475 | MS.gene04020:CDS |
| GCAAATGAGGATTGTGAAGG+AGG | 0.535525 | 3.3:-50956520 | MS.gene04020:CDS |
| TTGAGTCTTTCTTGGCTCCA+CGG | 0.537855 | 3.3:+50953273 | None:intergenic |
| CCATCCCGACCACCCCTACC+CGG | 0.539556 | 3.3:-50956910 | MS.gene04020:CDS |
| TGGATTTAAGAGATGCAGGT+TGG | 0.543440 | 3.3:+50956792 | None:intergenic |
| TGCAGAGATGCAACGGCGGG+GGG | 0.549879 | 3.3:+50956883 | None:intergenic |
| ACATCTGGAAAATGGAAAAG+TGG | 0.550640 | 3.3:+50955174 | None:intergenic |
| AACATATAGATCACCAGTTG+TGG | 0.552927 | 3.3:-50953357 | MS.gene04020:CDS |
| TGATGTTGGAAGACAATGTA+AGG | 0.554639 | 3.3:+50954534 | None:intergenic |
| GAAATGCTCTTTGTATATGC+AGG | 0.555579 | 3.3:-50954357 | MS.gene04020:intron |
| TTAACACAATCCAGTGCTGT+AGG | 0.557958 | 3.3:+50953944 | None:intergenic |
| TGTCTTCCAACATCAAGCAT+TGG | 0.560666 | 3.3:-50954526 | MS.gene04020:CDS |
| GCTGGGAGTCTTTATATATG+TGG | 0.561220 | 3.3:-50956399 | MS.gene04020:CDS |
| AACTGGGAAATCGTTGTCGA+TGG | 0.571839 | 3.3:-50956367 | MS.gene04020:CDS |
| AAGATTTATATAACTCGCCA+AGG | 0.575313 | 3.3:+50953249 | None:intergenic |
| TTTACTCAATTGGGCTACTG+AGG | 0.577291 | 3.3:-50956328 | MS.gene04020:intron |
| TGGGAGTTGCAGAGATGCAA+CGG | 0.581077 | 3.3:+50956876 | None:intergenic |
| GTTGCAGAGATGCAACGGCG+GGG | 0.591357 | 3.3:+50956881 | None:intergenic |
| ACAGATAGAACATTGGGCAG+CGG | 0.591776 | 3.3:+50955647 | None:intergenic |
| AGTATAATTTGTTGATGATG+TGG | 0.593647 | 3.3:+50953317 | None:intergenic |
| ACAATTTACAGATAGAACAT+TGG | 0.594343 | 3.3:+50955640 | None:intergenic |
| AAGAGCAAAATGTGGTGTTG+GGG | 0.594584 | 3.3:-50956452 | MS.gene04020:CDS |
| AAAATTCCATGATTCCAGCA+GGG | 0.599680 | 3.3:+50953195 | None:intergenic |
| GTGACACCCAAACTAGATGA+AGG | 0.606981 | 3.3:-50952981 | MS.gene04020:CDS |
| GCCCGAAAAGTTACAACAGT+AGG | 0.614021 | 3.3:+50954811 | None:intergenic |
| AAATTCCATGATTCCAGCAG+GGG | 0.627294 | 3.3:+50953196 | None:intergenic |
| ACTTGGGTTACATAAAACCC+TGG | 0.627648 | 3.3:-50955476 | MS.gene04020:CDS |
| AGCATTGGAACTATGTGCCA+GGG | 0.629160 | 3.3:-50954511 | MS.gene04020:intron |
| GAGTTGCAGAGATGCAACGG+CGG | 0.629475 | 3.3:+50956879 | None:intergenic |
| CGAGTTATATAAATCTTATG+CGG | 0.630317 | 3.3:-50953243 | MS.gene04020:CDS |
| AAATCCAAATGGAACCCCAA+AGG | 0.640713 | 3.3:-50956776 | MS.gene04020:intron |
| ATCTACGATGGTGTGTCGTG+AGG | 0.640843 | 3.3:-50956475 | MS.gene04020:CDS |
| TATGTGGCTGTCCTGGAACT+GGG | 0.647137 | 3.3:-50956383 | MS.gene04020:CDS |
| GGAGCAAATGAGGATTGTGA+AGG | 0.660637 | 3.3:-50956523 | MS.gene04020:CDS |
| TCCTCGATGAAACGTTTCCG+TGG | 0.662475 | 3.3:-50953290 | MS.gene04020:CDS |
| GTCTACAGCACCATCTACGA+TGG | 0.684384 | 3.3:-50956487 | MS.gene04020:CDS |
| AATTCCATGATTCCAGCAGG+GGG | 0.690738 | 3.3:+50953197 | None:intergenic |
| TCCACGGAAACGTTTCATCG+AGG | 0.729636 | 3.3:+50953289 | None:intergenic |
| GATTTGTCGAACGACTGATG+AGG | 0.730477 | 3.3:+50956844 | None:intergenic |
| TTGGGTTACATAAAACCCTG+GGG | 0.747246 | 3.3:-50955474 | MS.gene04020:CDS |
| TCGTGAGGAAGAGCAAAATG+TGG | 0.753694 | 3.3:-50956460 | MS.gene04020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTATTAAAAAAAAAAATAG+TGG | - | chr3.3:50956072-50956091 | MS.gene04020:intron | 10.0% |
| !! | TACAATAAAAGAAAAAATTA+TGG | + | chr3.3:50955588-50955607 | None:intergenic | 10.0% |
| !! | TTAATATAAAAACTATTTAG+TGG | + | chr3.3:50956664-50956683 | None:intergenic | 10.0% |
| !!! | CAATGATATTTTTTTTTAAT+AGG | + | chr3.3:50955098-50955117 | None:intergenic | 10.0% |
| !!! | CTAAATAGTTTTTATATTAA+AGG | - | chr3.3:50956664-50956683 | MS.gene04020:intron | 10.0% |
| !! | ATTGAAATTAATTGAATGAT+TGG | - | chr3.3:50953511-50953530 | MS.gene04020:intron | 15.0% |
| !! | CTTGTTAATTATAACAATTA+TGG | + | chr3.3:50953570-50953589 | None:intergenic | 15.0% |
| !! | TAAAAAACAAGAATTTGATA+TGG | - | chr3.3:50955847-50955866 | MS.gene04020:intron | 15.0% |
| !! | TATGAAAAAAGATATACTAT+CGG | + | chr3.3:50953942-50953961 | None:intergenic | 15.0% |
| !! | TTCTGTATAATTAATGTTAT+AGG | - | chr3.3:50956233-50956252 | MS.gene04020:intron | 15.0% |
| !! | TTTCATTAAATTCTTCTAAA+AGG | + | chr3.3:50956124-50956143 | None:intergenic | 15.0% |
| !! | AATTAATTGAATGATTGGAA+TGG | - | chr3.3:50953516-50953535 | MS.gene04020:intron | 20.0% |
| !! | ATTTGAACCTATAACATATT+AGG | - | chr3.3:50955634-50955653 | MS.gene04020:CDS | 20.0% |
| !! | GTATAGTGTTATAGATTTAA+AGG | - | chr3.3:50953592-50953611 | MS.gene04020:intron | 20.0% |
| !! | TAAGCAAATATAAATGTATC+TGG | + | chr3.3:50955304-50955323 | None:intergenic | 20.0% |
| !! | TACTTAAGATTATTCAAGAA+AGG | - | chr3.3:50955000-50955019 | MS.gene04020:CDS | 20.0% |
| !! | TTACATAAATAATTACTGCA+GGG | - | chr3.3:50956724-50956743 | MS.gene04020:intron | 20.0% |
| !!! | AATGTAAGATTGTTGTTATA+CGG | - | chr3.3:50955026-50955045 | MS.gene04020:CDS | 20.0% |
| !!! | GTTAGAGCTTTAATATATAT+TGG | - | chr3.3:50956049-50956068 | MS.gene04020:intron | 20.0% |
| !!! | TGTAATCATTTTGAAAAGAA+TGG | - | chr3.3:50953731-50953750 | MS.gene04020:intron | 20.0% |
| !!! | TTTGTAAGCTAGTTTAAAAT+TGG | - | chr3.3:50953708-50953727 | MS.gene04020:intron | 20.0% |
| ! | AAAAGATATACTATCGGTAT+TGG | + | chr3.3:50953936-50953955 | None:intergenic | 25.0% |
| ! | ACAATTTACAGATAGAACAT+TGG | + | chr3.3:50954134-50954153 | None:intergenic | 25.0% |
| ! | ATAAGAATACATCTGGAAAA+TGG | + | chr3.3:50954608-50954627 | None:intergenic | 25.0% |
| ! | ATTACATAAACAAGCAGTAA+TGG | + | chr3.3:50954463-50954482 | None:intergenic | 25.0% |
| ! | CAATTTACAGATAGAACATT+GGG | + | chr3.3:50954133-50954152 | None:intergenic | 25.0% |
| ! | CAGCATGAAATATATATTAC+TGG | - | chr3.3:50956168-50956187 | MS.gene04020:intron | 25.0% |
| ! | CGAGTTATATAAATCTTATG+CGG | - | chr3.3:50956528-50956547 | MS.gene04020:CDS | 25.0% |
| ! | GAAAGCAAATTTACTCAATT+GGG | - | chr3.3:50953434-50953453 | MS.gene04020:intron | 25.0% |
| ! | GTAAAAATCAAATGATACAG+AGG | + | chr3.3:50956859-50956878 | None:intergenic | 25.0% |
| ! | GTATATATCCTTAACTTTAG+AGG | - | chr3.3:50955953-50955972 | MS.gene04020:intron | 25.0% |
| ! | GTTACATAAATAATTACTGC+AGG | - | chr3.3:50956723-50956742 | MS.gene04020:intron | 25.0% |
| ! | GTTATAATGAGTTGTAATGT+AGG | - | chr3.3:50955141-50955160 | MS.gene04020:intron | 25.0% |
| ! | TACTGCTTGTTTATGTAATT+TGG | - | chr3.3:50954464-50954483 | MS.gene04020:intron | 25.0% |
| ! | TGAAAGCAAATTTACTCAAT+TGG | - | chr3.3:50953433-50953452 | MS.gene04020:intron | 25.0% |
| ! | TGCAAATGAAAATGTGTTAA+TGG | + | chr3.3:50954094-50954113 | None:intergenic | 25.0% |
| ! | TTGCTACTATGAAAATATCA+TGG | - | chr3.3:50955072-50955091 | MS.gene04020:intron | 25.0% |
| ! | TTTACCTATAAGAATACATC+TGG | + | chr3.3:50954615-50954634 | None:intergenic | 25.0% |
| !! | ATATTACTGGTTGTCATAAA+AGG | - | chr3.3:50956181-50956200 | MS.gene04020:intron | 25.0% |
| !! | ATGTGTTCTGTATATTTTTC+AGG | - | chr3.3:50955714-50955733 | MS.gene04020:intron | 25.0% |
| !! | ATTAACACATTTTCATTTGC+AGG | - | chr3.3:50954093-50954112 | MS.gene04020:intron | 25.0% |
| !! | TACATCTGATATTTTCACAA+AGG | - | chr3.3:50954168-50954187 | MS.gene04020:intron | 25.0% |
| !! | TTAAACTAGCTTACAAAAGA+GGG | + | chr3.3:50953705-50953724 | None:intergenic | 25.0% |
| !! | TTAACACATTTTCATTTGCA+GGG | - | chr3.3:50954094-50954113 | MS.gene04020:intron | 25.0% |
| !! | TTTAAACTAGCTTACAAAAG+AGG | + | chr3.3:50953706-50953725 | None:intergenic | 25.0% |
| !! | TTTTCCAGATGTATTCTTAT+AGG | - | chr3.3:50954608-50954627 | MS.gene04020:intron | 25.0% |
| !!! | AATCATTTTGAAAAGAATGG+AGG | - | chr3.3:50953734-50953753 | MS.gene04020:intron | 25.0% |
| !!! | AGTATAATTTGTTGATGATG+TGG | + | chr3.3:50956457-50956476 | None:intergenic | 25.0% |
| AACTAATCCACTCAATGTTA+TGG | - | chr3.3:50954267-50954286 | MS.gene04020:intron | 30.0% | |
| AAGATTTATATAACTCGCCA+AGG | + | chr3.3:50956525-50956544 | None:intergenic | 30.0% | |
| AATACAAGCACAATAATCCA+AGG | + | chr3.3:50956886-50956905 | None:intergenic | 30.0% | |
| ACATGTACAAATCAAATCCA+GGG | + | chr3.3:50954415-50954434 | None:intergenic | 30.0% | |
| AGCAATATATCAAGCTAAAG+TGG | + | chr3.3:50955057-50955076 | None:intergenic | 30.0% | |
| ATACAAGCACAATAATCCAA+GGG | + | chr3.3:50956885-50956904 | None:intergenic | 30.0% | |
| CAAGACACCTAATATGTTAT+AGG | + | chr3.3:50955644-50955663 | None:intergenic | 30.0% | |
| CTCTTCTCAATTTATCATCT+CGG | + | chr3.3:50956771-50956790 | None:intergenic | 30.0% | |
| CTTATTGTGCTTGTTTAAAC+AGG | - | chr3.3:50954716-50954735 | MS.gene04020:intron | 30.0% | |
| GAGTAATTAAAAAGAGAGCA+AGG | + | chr3.3:50954919-50954938 | None:intergenic | 30.0% | |
| GCAAACTGCTGAAATAAAAT+AGG | + | chr3.3:50956267-50956286 | None:intergenic | 30.0% | |
| TACATGTACAAATCAAATCC+AGG | + | chr3.3:50954416-50954435 | None:intergenic | 30.0% | |
| TATATTAAAGGGCTTTCTTG+AGG | - | chr3.3:50956676-50956695 | MS.gene04020:intron | 30.0% | |
| TCAAACTGTATTACAGTCAA+GGG | + | chr3.3:50954679-50954698 | None:intergenic | 30.0% | |
| TCTTCTCAATTTATCATCTC+GGG | + | chr3.3:50956770-50956789 | None:intergenic | 30.0% | |
| TTAACAACACTTAGTTGACT+AGG | - | chr3.3:50954220-50954239 | MS.gene04020:intron | 30.0% | |
| TTGACTCATTGTTAATAAGC+TGG | - | chr3.3:50955927-50955946 | MS.gene04020:intron | 30.0% | |
| TTGGATTATTGTGCTTGTAT+TGG | - | chr3.3:50956885-50956904 | MS.gene04020:CDS | 30.0% | |
| ! | AACTGGTGATCTATATGTTT+TGG | + | chr3.3:50956413-50956432 | None:intergenic | 30.0% |
| ! | ACATTTACCCTTGATTTGAT+TGG | - | chr3.3:50953788-50953807 | MS.gene04020:intron | 30.0% |
| ! | ATCCTAAGCATAACTTTTGT+GGG | - | chr3.3:50955982-50956001 | MS.gene04020:intron | 30.0% |
| !! | ATCTTAGACCTCTAAAGTTA+AGG | + | chr3.3:50955964-50955983 | None:intergenic | 30.0% |
| !! | ATTTGATTTTTACACTCCCT+TGG | - | chr3.3:50956866-50956885 | MS.gene04020:CDS | 30.0% |
| !! | CATTCAATTTTGAGGATCTT+AGG | + | chr3.3:50956356-50956375 | None:intergenic | 30.0% |
| !! | CGATTCGATTTGATTTTCAT+CGG | + | chr3.3:50952957-50952976 | None:intergenic | 30.0% |
| !! | GTAGATGCACTGATTTATAA+TGG | + | chr3.3:50955474-50955493 | None:intergenic | 30.0% |
| !! | GTGGATTAGTTAACTAAGTA+AGG | + | chr3.3:50954258-50954277 | None:intergenic | 30.0% |
| !! | TGATATTACTTTTGCATTGC+AGG | - | chr3.3:50956813-50956832 | MS.gene04020:CDS | 30.0% |
| !!! | TTTTTTTTGTGTGTGTGATG+TGG | - | chr3.3:50953213-50953232 | MS.gene04020:CDS | 30.0% |
| AAAATTCCATGATTCCAGCA+GGG | + | chr3.3:50956579-50956598 | None:intergenic | 35.0% | |
| AACATATAGATCACCAGTTG+TGG | - | chr3.3:50956414-50956433 | MS.gene04020:CDS | 35.0% | |
| ACACGAATGAATTTCATTGC+AGG | - | chr3.3:50956927-50956946 | MS.gene04020:CDS | 35.0% | |
| ACATCTGGAAAATGGAAAAG+TGG | + | chr3.3:50954600-50954619 | None:intergenic | 35.0% | |
| AGATCCTCAAAATTGAATGC+AGG | - | chr3.3:50956357-50956376 | MS.gene04020:CDS | 35.0% | |
| ATAGTTCCAATGCTTGATGT+TGG | + | chr3.3:50955254-50955273 | None:intergenic | 35.0% | |
| ATGGGAATGTGAGTAACTAT+AGG | + | chr3.3:50955901-50955920 | None:intergenic | 35.0% | |
| CAAATATTGCAGCTTGCAAT+TGG | + | chr3.3:50955613-50955632 | None:intergenic | 35.0% | |
| CAATGTTATGGCAGATACTT+GGG | - | chr3.3:50954279-50954298 | MS.gene04020:intron | 35.0% | |
| CAATTTAATGCAGTAAGCCT+TGG | + | chr3.3:50954779-50954798 | None:intergenic | 35.0% | |
| CACGAATGAATTTCATTGCA+GGG | - | chr3.3:50956928-50956947 | MS.gene04020:CDS | 35.0% | |
| CATATTAGGTGTCTTGCATT+TGG | - | chr3.3:50955648-50955667 | MS.gene04020:CDS | 35.0% | |
| CATTTGGATTTAAGAGATGC+AGG | + | chr3.3:50952986-50953005 | None:intergenic | 35.0% | |
| CGTTTAGAAGATGCAATTGA+AGG | + | chr3.3:50952818-50952837 | None:intergenic | 35.0% | |
| CTCAAAATTGAATGCAGGTA+AGG | - | chr3.3:50956362-50956381 | MS.gene04020:CDS | 35.0% | |
| CTCAAACTGTATTACAGTCA+AGG | + | chr3.3:50954680-50954699 | None:intergenic | 35.0% | |
| CTGCATCTCTTAAATCCAAA+TGG | - | chr3.3:50952984-50953003 | MS.gene04020:CDS | 35.0% | |
| GAAATGCTCTTTGTATATGC+AGG | - | chr3.3:50955414-50955433 | MS.gene04020:CDS | 35.0% | |
| GATTGATGCATTCATGTTGA+TGG | - | chr3.3:50953849-50953868 | MS.gene04020:intron | 35.0% | |
| GGGATTGTCCTAGTTTAATA+AGG | + | chr3.3:50956750-50956769 | None:intergenic | 35.0% | |
| TAAGAAACATATTCTTGCCC+TGG | - | chr3.3:50954395-50954414 | MS.gene04020:intron | 35.0% | |
| TCAATGTTATGGCAGATACT+TGG | - | chr3.3:50954278-50954297 | MS.gene04020:intron | 35.0% | |
| TCTTACATCATGTTCGATGT+AGG | + | chr3.3:50954380-50954399 | None:intergenic | 35.0% | |
| TGATGTTGGAAGACAATGTA+AGG | + | chr3.3:50955240-50955259 | None:intergenic | 35.0% | |
| TGCTTGCAATTTGAATGCTT+TGG | - | chr3.3:50955775-50955794 | MS.gene04020:intron | 35.0% | |
| TGGTAAGCATGAAAAGATCA+TGG | + | chr3.3:50954580-50954599 | None:intergenic | 35.0% | |
| TGTGATGTGGAATTGTAGAT+GGG | - | chr3.3:50953226-50953245 | MS.gene04020:CDS | 35.0% | |
| ! | AGCCTACTGTTGTAACTTTT+CGG | - | chr3.3:50954958-50954977 | MS.gene04020:intron | 35.0% |
| ! | CTTACCTGCATTCAATTTTG+AGG | + | chr3.3:50956364-50956383 | None:intergenic | 35.0% |
| ! | GAGGACAGCTTCATTTTATA+AGG | + | chr3.3:50954876-50954895 | None:intergenic | 35.0% |
| ! | GATCCTAAGCATAACTTTTG+TGG | - | chr3.3:50955981-50956000 | MS.gene04020:intron | 35.0% |
| ! | GGTTGTCATAAAAGGCATAT+AGG | - | chr3.3:50956189-50956208 | MS.gene04020:intron | 35.0% |
| ! | TCTTCTAAAAGGCAAACCAA+CGG | + | chr3.3:50956113-50956132 | None:intergenic | 35.0% |
| ! | TGTAGGAAGATTTTGTTCTG+AGG | + | chr3.3:50955813-50955832 | None:intergenic | 35.0% |
| ! | TTACTCCTTTTATCCGTTTC+AGG | - | chr3.3:50954933-50954952 | MS.gene04020:intron | 35.0% |
| !! | AAGTTCTGAAGTTGCTGTAA+AGG | + | chr3.3:50954341-50954360 | None:intergenic | 35.0% |
| !! | CAGTAATGGACAATCATATG+TGG | + | chr3.3:50954449-50954468 | None:intergenic | 35.0% |
| AAATCCAAATGGAACCCCAA+AGG | - | chr3.3:50952995-50953014 | MS.gene04020:CDS | 40.0% | |
| AAATTCCATGATTCCAGCAG+GGG | + | chr3.3:50956578-50956597 | None:intergenic | 40.0% | |
| AACAATGAGTCAACCATCGA+TGG | + | chr3.3:50955920-50955939 | None:intergenic | 40.0% | |
| AAGCGTGCCAATCAAATCAA+GGG | + | chr3.3:50953798-50953817 | None:intergenic | 40.0% | |
| AATCAAATGTGTCAGCTCAG+TGG | + | chr3.3:50953172-50953191 | None:intergenic | 40.0% | |
| ACAAAATCTTCCTACAGCAC+TGG | - | chr3.3:50955817-50955836 | MS.gene04020:intron | 40.0% | |
| ACAATGAGTCAACCATCGAT+GGG | + | chr3.3:50955919-50955938 | None:intergenic | 40.0% | |
| ACATAAAACCCTGGGGAAAA+CGG | - | chr3.3:50954304-50954323 | MS.gene04020:intron | 40.0% | |
| ACTGATGAGGTGACTGAATT+GGG | + | chr3.3:50952917-50952936 | None:intergenic | 40.0% | |
| ACTTGGGTTACATAAAACCC+TGG | - | chr3.3:50954295-50954314 | MS.gene04020:intron | 40.0% | |
| AGCCCACAAAAGTTATGCTT+AGG | + | chr3.3:50955987-50956006 | None:intergenic | 40.0% | |
| ATGATGTGGCAGAGATTGTA+TGG | + | chr3.3:50956443-50956462 | None:intergenic | 40.0% | |
| CAAATGATACAGAGGCTCAA+GGG | + | chr3.3:50956851-50956870 | None:intergenic | 40.0% | |
| CAATGTAAGGAAGTTCCTGA+TGG | + | chr3.3:50955227-50955246 | None:intergenic | 40.0% | |
| CAATGTTGTTGTACTTACCC+TGG | + | chr3.3:50955280-50955299 | None:intergenic | 40.0% | |
| CCAATGATGTACACAAGTAG+AGG | + | chr3.3:50954895-50954914 | None:intergenic | 40.0% | |
| CCTCTACTTGTGTACATCAT+TGG | - | chr3.3:50954892-50954911 | MS.gene04020:intron | 40.0% | |
| CTTGGGTTACATAAAACCCT+GGG | - | chr3.3:50954296-50954315 | MS.gene04020:intron | 40.0% | |
| CTTTATATATGTGGCTGTCC+TGG | - | chr3.3:50953381-50953400 | MS.gene04020:CDS | 40.0% | |
| GAAAATTCCATGATTCCAGC+AGG | + | chr3.3:50956580-50956599 | None:intergenic | 40.0% | |
| GAAGAGCAAAATGTGGTGTT+GGG | - | chr3.3:50953318-50953337 | MS.gene04020:CDS | 40.0% | |
| GATTGTATGGTATCCACAAC+TGG | + | chr3.3:50956430-50956449 | None:intergenic | 40.0% | |
| GCACGCTTATTGAAGTATGT+GGG | - | chr3.3:50953810-50953829 | MS.gene04020:intron | 40.0% | |
| GCAGGTAAGGATTGATCATA+TGG | - | chr3.3:50956375-50956394 | MS.gene04020:CDS | 40.0% | |
| GCTGGGAGTCTTTATATATG+TGG | - | chr3.3:50953372-50953391 | MS.gene04020:CDS | 40.0% | |
| GTATCTGCCATAACATTGAG+TGG | + | chr3.3:50954277-50954296 | None:intergenic | 40.0% | |
| GTCTAAGTTTCAAACTCCGT+TGG | - | chr3.3:50956094-50956113 | MS.gene04020:intron | 40.0% | |
| GTGATGTGGAATTGTAGATG+GGG | - | chr3.3:50953227-50953246 | MS.gene04020:CDS | 40.0% | |
| GTGTGATGTGGAATTGTAGA+TGG | - | chr3.3:50953225-50953244 | MS.gene04020:CDS | 40.0% | |
| GTGTTGAGCATGAAAAAGCT+GGG | - | chr3.3:50953355-50953374 | MS.gene04020:CDS | 40.0% | |
| TAAGCGTGCCAATCAAATCA+AGG | + | chr3.3:50953799-50953818 | None:intergenic | 40.0% | |
| TCAAATGATACAGAGGCTCA+AGG | + | chr3.3:50956852-50956871 | None:intergenic | 40.0% | |
| TGAGGATCTTAGGCTACAAA+CGG | + | chr3.3:50956346-50956365 | None:intergenic | 40.0% | |
| TGGATTTAAGAGATGCAGGT+TGG | + | chr3.3:50952982-50953001 | None:intergenic | 40.0% | |
| TGTCTTCCAACATCAAGCAT+TGG | - | chr3.3:50955245-50955264 | MS.gene04020:CDS | 40.0% | |
| TGTGTTGAGCATGAAAAAGC+TGG | - | chr3.3:50953354-50953373 | MS.gene04020:CDS | 40.0% | |
| TTAACACAATCCAGTGCTGT+AGG | + | chr3.3:50955830-50955849 | None:intergenic | 40.0% | |
| TTGGGTTACATAAAACCCTG+GGG | - | chr3.3:50954297-50954316 | MS.gene04020:intron | 40.0% | |
| TTTACTCAATTGGGCTACTG+AGG | - | chr3.3:50953443-50953462 | MS.gene04020:intron | 40.0% | |
| ! | AAGAGCAAAATGTGGTGTTG+GGG | - | chr3.3:50953319-50953338 | MS.gene04020:CDS | 40.0% |
| ! | ACACATTTTCATTTGCAGGG+AGG | - | chr3.3:50954097-50954116 | MS.gene04020:intron | 40.0% |
| ! | ACTGACTGACTTTACCTTTG+GGG | + | chr3.3:50953012-50953031 | None:intergenic | 40.0% |
| ! | GACTGACTGACTTTACCTTT+GGG | + | chr3.3:50953013-50953032 | None:intergenic | 40.0% |
| ! | GCCTACTGTTGTAACTTTTC+GGG | - | chr3.3:50954959-50954978 | MS.gene04020:intron | 40.0% |
| ! | GTGCAGAGTGTTAAATGATC+AGG | - | chr3.3:50956606-50956625 | MS.gene04020:intron | 40.0% |
| ! | TAAAGCTCTAACGAAGCACA+AGG | + | chr3.3:50956041-50956060 | None:intergenic | 40.0% |
| ! | TAGCTGATCGATTTCTTCCA+AGG | - | chr3.3:50954759-50954778 | MS.gene04020:intron | 40.0% |
| ! | TGACTGACTGACTTTACCTT+TGG | + | chr3.3:50953014-50953033 | None:intergenic | 40.0% |
| ! | TTACAGTCAAGGGTATGACA+AGG | + | chr3.3:50954669-50954688 | None:intergenic | 40.0% |
| !! | AGCTATTTTGTCTCACCATC+AGG | - | chr3.3:50955209-50955228 | MS.gene04020:CDS | 40.0% |
| !! | TTTACCTTTGGGGTTCCATT+TGG | + | chr3.3:50953002-50953021 | None:intergenic | 40.0% |
| AACAGTAGGCTTGCCTGAAA+CGG | + | chr3.3:50954949-50954968 | None:intergenic | 45.0% | |
| AACTGGGAAATCGTTGTCGA+TGG | - | chr3.3:50953404-50953423 | MS.gene04020:intron | 45.0% | |
| AATTCCATGATTCCAGCAGG+GGG | + | chr3.3:50956577-50956596 | None:intergenic | 45.0% | |
| ACAGATAGAACATTGGGCAG+CGG | + | chr3.3:50954127-50954146 | None:intergenic | 45.0% | |
| CATAAAACCCTGGGGAAAAC+GGG | - | chr3.3:50954305-50954324 | MS.gene04020:intron | 45.0% | |
| GAAAAGAATGGAGGACTCGT+TGG | - | chr3.3:50953743-50953762 | MS.gene04020:intron | 45.0% | |
| GACTGATGAGGTGACTGAAT+TGG | + | chr3.3:50952918-50952937 | None:intergenic | 45.0% | |
| GAGGATCTTAGGCTACAAAC+GGG | + | chr3.3:50956345-50956364 | None:intergenic | 45.0% | |
| GATTTGTCGAACGACTGATG+AGG | + | chr3.3:50952930-50952949 | None:intergenic | 45.0% | |
| GCAAATGAGGATTGTGAAGG+AGG | - | chr3.3:50953251-50953270 | MS.gene04020:CDS | 45.0% | |
| GCCAAGAAAGACTCAATCCT+TGG | - | chr3.3:50956505-50956524 | MS.gene04020:CDS | 45.0% | |
| GCCAAGGATTGAGTCTTTCT+TGG | + | chr3.3:50956509-50956528 | None:intergenic | 45.0% | |
| GCCCGAAAAGTTACAACAGT+AGG | + | chr3.3:50954963-50954982 | None:intergenic | 45.0% | |
| GCTTGCCTGAAACGGATAAA+AGG | + | chr3.3:50954941-50954960 | None:intergenic | 45.0% | |
| GGAAGAGCAAAATGTGGTGT+TGG | - | chr3.3:50953317-50953336 | MS.gene04020:CDS | 45.0% | |
| GGAGCAAATGAGGATTGTGA+AGG | - | chr3.3:50953248-50953267 | MS.gene04020:CDS | 45.0% | |
| GGCACGCTTATTGAAGTATG+TGG | - | chr3.3:50953809-50953828 | MS.gene04020:intron | 45.0% | |
| GTTACTCACATTCCCATCGA+TGG | - | chr3.3:50955904-50955923 | MS.gene04020:intron | 45.0% | |
| TCGTGAGGAAGAGCAAAATG+TGG | - | chr3.3:50953311-50953330 | MS.gene04020:CDS | 45.0% | |
| TGCAAGGGAAGAGAAAGGAA+AGG | + | chr3.3:50956016-50956035 | None:intergenic | 45.0% | |
| TTGAGTCTTTCTTGGCTCCA+CGG | + | chr3.3:50956501-50956520 | None:intergenic | 45.0% | |
| TTGTAGATGGGGAGCAAATG+AGG | - | chr3.3:50953238-50953257 | MS.gene04020:CDS | 45.0% | |
| ! | AGCATTGGAACTATGTGCCA+GGG | - | chr3.3:50955260-50955279 | MS.gene04020:intron | 45.0% |
| !! | AAGCATTGGAACTATGTGCC+AGG | - | chr3.3:50955259-50955278 | MS.gene04020:intron | 45.0% |
| !! | CTGCAGGGCCTTATTAAACT+AGG | - | chr3.3:50956739-50956758 | MS.gene04020:intron | 45.0% |
| !! | GTGGTGTTGGGGTTTTGTAA+AGG | - | chr3.3:50953330-50953349 | MS.gene04020:CDS | 45.0% |
| !!! | TAAATAGTTTTTATATTAAA+GGG | - | chr3.3:50956665-50956684 | MS.gene04020:intron | 5.0% |
| AACGAAGCACAAGGTGTGCA+AGG | + | chr3.3:50956032-50956051 | None:intergenic | 50.0% | |
| AATTCCCCCTGCTGGAATCA+TGG | - | chr3.3:50956570-50956589 | MS.gene04020:intron | 50.0% | |
| ACGAAGCACAAGGTGTGCAA+GGG | + | chr3.3:50956031-50956050 | None:intergenic | 50.0% | |
| AGGGCTTTCTTGAGGCAAAG+TGG | - | chr3.3:50956684-50956703 | MS.gene04020:intron | 50.0% | |
| AGGTGTGCAAGGGAAGAGAA+AGG | + | chr3.3:50956021-50956040 | None:intergenic | 50.0% | |
| ATATGTGGCTGTCCTGGAAC+TGG | - | chr3.3:50953387-50953406 | MS.gene04020:CDS | 50.0% | |
| ATCTACGATGGTGTGTCGTG+AGG | - | chr3.3:50953296-50953315 | MS.gene04020:CDS | 50.0% | |
| ATGGAGCACAGCTCTGTCTT+TGG | + | chr3.3:50954561-50954580 | None:intergenic | 50.0% | |
| CAGAAAGTTGCTGCAGCTTC+TGG | - | chr3.3:50955383-50955402 | MS.gene04020:intron | 50.0% | |
| GACAACGATTTCCCAGTTCC+AGG | + | chr3.3:50953402-50953421 | None:intergenic | 50.0% | |
| GTCTACAGCACCATCTACGA+TGG | - | chr3.3:50953284-50953303 | MS.gene04020:CDS | 50.0% | |
| TATGTGGCTGTCCTGGAACT+GGG | - | chr3.3:50953388-50953407 | MS.gene04020:CDS | 50.0% | |
| TCACGACACACCATCGTAGA+TGG | + | chr3.3:50953297-50953316 | None:intergenic | 50.0% | |
| TCATCACTAATTCCCCCTGC+TGG | - | chr3.3:50956562-50956581 | MS.gene04020:intron | 50.0% | |
| TCCACGGAAACGTTTCATCG+AGG | + | chr3.3:50956485-50956504 | None:intergenic | 50.0% | |
| TCCTCGATGAAACGTTTCCG+TGG | - | chr3.3:50956481-50956500 | MS.gene04020:CDS | 50.0% | |
| TCTTAGGCTACAAACGGGAG+AGG | + | chr3.3:50956340-50956359 | None:intergenic | 50.0% | |
| TGGGAGTTGCAGAGATGCAA+CGG | + | chr3.3:50952898-50952917 | None:intergenic | 50.0% | |
| AGTTGCAGAGATGCAACGGC+GGG | + | chr3.3:50952894-50952913 | None:intergenic | 55.0% | |
| GAGTTGCAGAGATGCAACGG+CGG | + | chr3.3:50952895-50952914 | None:intergenic | 55.0% | |
| ATTTCCGGGTAGGGGTGGTC+GGG | + | chr3.3:50952868-50952887 | None:intergenic | 60.0% | |
| GATTTCCGGGTAGGGGTGGT+CGG | + | chr3.3:50952869-50952888 | None:intergenic | 60.0% | |
| GTTGCAGAGATGCAACGGCG+GGG | + | chr3.3:50952893-50952912 | None:intergenic | 60.0% | |
| TTGCAGAGATGCAACGGCGG+GGG | + | chr3.3:50952892-50952911 | None:intergenic | 60.0% | |
| ! | ACCCTGGGGAAAACGGGTTC+AGG | - | chr3.3:50954311-50954330 | MS.gene04020:intron | 60.0% |
| ! | GCCTGAACCCGTTTTCCCCA+GGG | + | chr3.3:50954315-50954334 | None:intergenic | 60.0% |
| ! | TGCCTGAACCCGTTTTCCCC+AGG | + | chr3.3:50954316-50954335 | None:intergenic | 60.0% |
| TGCAACGGCGGGGGGATTTC+CGG | + | chr3.3:50952883-50952902 | None:intergenic | 65.0% | |
| TGCAGAGATGCAACGGCGGG+GGG | + | chr3.3:50952891-50952910 | None:intergenic | 65.0% | |
| AGGGGTGGTCGGGATGGGTG+TGG | + | chr3.3:50952858-50952877 | None:intergenic | 70.0% | |
| CCATCCCGACCACCCCTACC+CGG | - | chr3.3:50952861-50952880 | MS.gene04020:intron | 70.0% | |
| CGGGTAGGGGTGGTCGGGAT+GGG | + | chr3.3:50952863-50952882 | None:intergenic | 70.0% | |
| GCAACGGCGGGGGGATTTCC+GGG | + | chr3.3:50952882-50952901 | None:intergenic | 70.0% | |
| GCGGGGGGATTTCCGGGTAG+GGG | + | chr3.3:50952876-50952895 | None:intergenic | 70.0% | |
| GGCGGGGGGATTTCCGGGTA+GGG | + | chr3.3:50952877-50952896 | None:intergenic | 70.0% | |
| GGGGGATTTCCGGGTAGGGG+TGG | + | chr3.3:50952873-50952892 | None:intergenic | 70.0% | |
| GGTGGTCGGGATGGGTGTGG+CGG | + | chr3.3:50952855-50952874 | None:intergenic | 70.0% | |
| GTGGTCGGGATGGGTGTGGC+GGG | + | chr3.3:50952854-50952873 | None:intergenic | 70.0% | |
| CCGGGTAGGGGTGGTCGGGA+TGG | + | chr3.3:50952864-50952883 | None:intergenic | 75.0% | |
| CGGCGGGGGGATTTCCGGGT+AGG | + | chr3.3:50952878-50952897 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 50952812 | 50956981 | 50952812 | ID=MS.gene04020 |
| chr3.3 | mRNA | 50952812 | 50956981 | 50952812 | ID=MS.gene04020.t1;Parent=MS.gene04020 |
| chr3.3 | exon | 50956777 | 50956981 | 50956777 | ID=MS.gene04020.t1.exon1;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50956777 | 50956981 | 50956777 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50956329 | 50956549 | 50956329 | ID=MS.gene04020.t1.exon2;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50956329 | 50956549 | 50956329 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50955604 | 50955678 | 50955604 | ID=MS.gene04020.t1.exon3;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50955604 | 50955678 | 50955604 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50955400 | 50955500 | 50955400 | ID=MS.gene04020.t1.exon4;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50955400 | 50955500 | 50955400 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50955164 | 50955270 | 50955164 | ID=MS.gene04020.t1.exon5;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50955164 | 50955270 | 50955164 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50954996 | 50955055 | 50954996 | ID=MS.gene04020.t1.exon6;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50954996 | 50955055 | 50954996 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50954765 | 50954838 | 50954765 | ID=MS.gene04020.t1.exon7;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50954765 | 50954838 | 50954765 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50954512 | 50954562 | 50954512 | ID=MS.gene04020.t1.exon8;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50954512 | 50954562 | 50954512 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50954358 | 50954407 | 50954358 | ID=MS.gene04020.t1.exon9;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50954358 | 50954407 | 50954358 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50953925 | 50954057 | 50953925 | ID=MS.gene04020.t1.exon10;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50953925 | 50954057 | 50953925 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50953166 | 50953414 | 50953166 | ID=MS.gene04020.t1.exon11;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50953166 | 50953414 | 50953166 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50952959 | 50953048 | 50952959 | ID=MS.gene04020.t1.exon12;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50952959 | 50953048 | 50952959 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| chr3.3 | exon | 50952812 | 50952844 | 50952812 | ID=MS.gene04020.t1.exon13;Parent=MS.gene04020.t1 |
| chr3.3 | CDS | 50952812 | 50952844 | 50952812 | ID=cds.MS.gene04020.t1;Parent=MS.gene04020.t1 |
| Gene Sequence |
| Protein sequence |
