AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene00478

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00478.t1 MTR_1g018680 95.798 238 5 2 1 236 104 338 3.16e-163 456
MS.gene00478.t1 MTR_3g102520 63.362 232 84 1 5 236 108 338 6.09e-108 316
MS.gene00478.t1 MTR_3g102530 63.136 236 86 1 1 236 97 331 3.19e-107 313
MS.gene00478.t1 MTR_3g102510 59.322 236 95 1 1 236 85 319 3.09e-103 303
MS.gene00478.t1 MTR_3g102560 61.304 230 83 1 1 230 77 300 1.51e-102 300
MS.gene00478.t1 MTR_3g088415 54.661 236 104 2 2 236 252 485 3.78e-93 282
MS.gene00478.t1 MTR_3g102540 54.661 236 100 2 1 236 22 250 7.99e-89 264
MS.gene00478.t1 MTR_3g107970 54.310 232 105 1 5 236 228 458 2.52e-87 266
MS.gene00478.t1 MTR_3g088405 51.709 234 110 2 5 236 258 490 1.50e-85 263
MS.gene00478.t1 MTR_1g011470 53.448 232 107 1 5 236 176 406 9.15e-85 258
MS.gene00478.t1 MTR_3g088415 58.639 191 76 2 2 191 252 440 8.45e-78 241
MS.gene00478.t1 MTR_2g102520 49.787 235 115 2 4 236 229 462 1.16e-77 242
MS.gene00478.t1 MTR_2g102550 47.210 233 122 1 4 236 181 412 7.79e-76 236
MS.gene00478.t1 MTR_3g088415 60.135 148 57 1 2 149 252 397 2.30e-60 195
MS.gene00478.t1 MTR_7g089080 40.517 232 135 3 1 232 210 438 2.15e-52 182
MS.gene00478.t1 MTR_5g088980 38.839 224 129 4 10 232 184 400 3.83e-48 164
MS.gene00478.t1 MTR_8g074000 37.104 221 132 2 16 236 201 414 4.32e-46 159
MS.gene00478.t1 MTR_5g023790 37.104 221 132 2 16 236 197 410 3.38e-42 148
MS.gene00478.t1 MTR_5g023790 42.169 166 90 1 16 181 197 356 9.44e-40 141
MS.gene00478.t1 MTR_5g023790 46.154 117 63 0 16 132 197 313 3.27e-31 118
MS.gene00478.t1 MTR_3g060410 36.224 196 115 5 19 209 131 321 3.35e-26 104
MS.gene00478.t1 MTR_3g060770 33.937 221 129 6 19 234 56 264 5.56e-24 97.4
MS.gene00478.t1 MTR_3g061680 36.224 196 115 5 19 209 46 236 2.10e-23 95.9
MS.gene00478.t1 MTR_3g060820 35.714 196 116 5 19 209 46 236 2.13e-23 95.5
MS.gene00478.t1 MTR_3g060400 34.184 196 119 5 19 209 52 242 7.43e-23 94.4
MS.gene00478.t1 MTR_3g460990 34.184 196 119 5 19 209 52 242 7.43e-23 94.4
MS.gene00478.t1 MTR_5g044040 46.667 75 40 0 45 119 7 81 1.93e-19 81.3
MS.gene00478.t1 MTR_1g032850 30.208 192 121 6 23 210 371 553 2.57e-15 75.1
MS.gene00478.t1 MTR_6g045270 31.500 200 115 8 19 211 70 254 2.73e-14 71.2
MS.gene00478.t1 MTR_1g107535 29.697 165 98 5 24 178 107 263 1.25e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene00478.t1 AT5G43080 70.996 231 66 1 6 236 103 332 1.86e-122 352
MS.gene00478.t1 AT1G47230 68.831 231 71 1 6 236 113 342 1.39e-119 345
MS.gene00478.t1 AT5G43080 69.697 231 64 2 6 236 103 327 1.03e-118 342
MS.gene00478.t1 AT1G47230 68.534 232 71 2 6 236 113 343 1.01e-117 340
MS.gene00478.t1 AT1G47210 66.525 236 78 1 1 236 115 349 7.39e-115 333
MS.gene00478.t1 AT1G47220 62.338 231 86 1 6 236 74 303 1.30e-100 295
MS.gene00478.t1 AT1G44110 55.508 236 102 2 2 236 206 439 3.24e-92 278
MS.gene00478.t1 AT5G25380 52.542 236 103 2 5 236 188 418 3.60e-86 262
MS.gene00478.t1 AT1G15570 53.879 232 106 1 5 236 203 433 4.42e-86 263
MS.gene00478.t1 AT5G25380 52.542 236 103 2 5 236 188 418 4.73e-86 262
MS.gene00478.t1 AT5G25380 52.542 236 103 2 5 236 188 418 4.73e-86 262
MS.gene00478.t1 AT5G25380 52.542 236 103 2 5 236 194 424 8.64e-86 261
MS.gene00478.t1 AT1G80370 53.448 232 107 1 5 236 212 442 1.92e-85 261
MS.gene00478.t1 AT5G11300 53.017 232 108 1 5 236 187 417 1.34e-83 256
MS.gene00478.t1 AT1G77390 49.785 233 116 1 4 236 192 423 2.53e-79 245
MS.gene00478.t1 AT5G11300 54.167 192 87 1 5 196 187 377 3.91e-69 218
MS.gene00478.t1 AT3G11520 44.330 194 101 2 16 209 183 369 1.06e-48 165
MS.gene00478.t1 AT3G11520 44.503 191 99 2 16 206 183 366 2.02e-47 161
MS.gene00478.t1 AT5G06150 40.271 221 123 4 15 234 205 417 1.24e-46 160
MS.gene00478.t1 AT2G26760 39.732 224 127 4 10 232 149 365 2.56e-42 148
MS.gene00478.t1 AT1G20610 35.747 221 135 2 16 236 202 415 4.78e-42 148
MS.gene00478.t1 AT4G37490 39.524 210 117 5 1 209 176 376 8.71e-42 147
MS.gene00478.t1 AT1G76310 35.586 222 135 3 16 236 202 416 5.77e-40 142
MS.gene00478.t1 AT2G17620 37.445 227 134 3 10 236 191 409 4.79e-39 140
MS.gene00478.t1 AT1G16330 33.186 226 144 2 7 232 411 629 8.65e-38 139
MS.gene00478.t1 AT1G76310 39.412 170 96 2 16 184 202 365 1.40e-37 135
MS.gene00478.t1 AT4G35620 37.004 227 135 3 10 236 192 410 3.67e-37 135
MS.gene00478.t1 AT4G35620 40.000 185 103 3 10 194 192 368 1.88e-34 127
MS.gene00478.t1 AT1G76310 32.000 250 134 4 16 236 202 444 2.72e-34 128
MS.gene00478.t1 AT5G06150 48.305 118 61 0 15 132 205 322 9.68e-34 124
MS.gene00478.t1 AT1G47210 70.513 78 23 0 1 78 115 192 2.17e-32 117
MS.gene00478.t1 AT1G76310 44.915 118 64 1 16 132 202 319 2.98e-30 115
MS.gene00478.t1 AT1G20590 34.463 177 105 3 52 224 66 235 4.58e-26 102
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.68e-15 75.1
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 292 389 2.89e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 292 389 2.89e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 281 378 2.90e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.92e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.92e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.92e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.92e-15 74.7
MS.gene00478.t1 AT1G34460 35.593 118 56 1 15 132 295 392 2.99e-15 74.7
MS.gene00478.t1 AT1G14750 31.343 201 126 7 23 220 218 409 3.72e-15 74.3
MS.gene00478.t1 AT1G14750 30.348 201 129 6 23 220 218 410 5.57e-15 73.9
MS.gene00478.t1 AT1G14750 30.348 201 129 6 23 220 386 578 7.37e-15 73.6
MS.gene00478.t1 AT1G14750 30.366 191 123 5 23 210 386 569 2.88e-14 72.0
MS.gene00478.t1 AT1G70210 30.726 179 111 5 7 177 64 237 3.21e-11 62.4

Find 0 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTGATTTTTTATTTGTTT+TGG - 10755:9928-9947 MS.gene00478:intron 10.0%
!! TATTCTTAAAAAAGTTAGTA+AGG + 10755:10743-10762 MS.gene00478:intergenic 15.0%
!! ATTATATACAGAAAGTTCAA+AGG - 10755:9443-9462 MS.gene00478:CDS 20.0%
!! CACATTTGACAAAAAATTTA+GGG + 10755:10803-10822 MS.gene00478:intergenic 20.0%
!! TAAACAATAAAATCACATCT+TGG + 10755:9893-9912 MS.gene00478:intergenic 20.0%
!! TGATGAATAAATACCTAATT+TGG - 10755:9691-9710 MS.gene00478:CDS 20.0%
!! TTATATACAGAAAGTTCAAA+GGG - 10755:9444-9463 MS.gene00478:CDS 20.0%
!!! AAATAGTATCATCTAAGATA+GGG - 10755:10512-10531 MS.gene00478:intron 20.0%
!!! AGTTTGAAATCAATTTTACT+TGG - 10755:10904-10923 MS.gene00478:intron 20.0%
!!! TAAAATTGATTTCAAACTTC+TGG + 10755:10902-10921 MS.gene00478:intergenic 20.0%
!!! TTGGTATTTTGTTTGATTAA+AGG - 10755:10117-10136 MS.gene00478:intron 20.0%
! AAATAGAAAGAGAATTAGAG+TGG - 10755:10568-10587 MS.gene00478:intron 25.0%
! AAATGGGTCAAAATTAATAG+AGG + 10755:9798-9817 MS.gene00478:intergenic 25.0%
! AAGAGTAATCTCTGTTAAAA+TGG + 10755:9815-9834 MS.gene00478:intergenic 25.0%
! AAGTCATTGAAGTTTGAATT+GGG - 10755:10166-10185 MS.gene00478:intron 25.0%
! AATAGAAAGAGAATTAGAGT+GGG - 10755:10569-10588 MS.gene00478:intron 25.0%
! AATTAAAATAACACTCGCAT+TGG - 10755:9738-9757 MS.gene00478:CDS 25.0%
! AGAGTAATCTCTGTTAAAAT+GGG + 10755:9814-9833 MS.gene00478:intergenic 25.0%
! AGATAAATACAAACAGCATA+AGG - 10755:11374-11393 MS.gene00478:CDS 25.0%
! ATGTTTCTTTGTATGTTGAA+TGG - 10755:10236-10255 MS.gene00478:intron 25.0%
! ATTACTCTTATGAAAATGTC+AGG - 10755:9826-9845 MS.gene00478:intron 25.0%
! ATTCGTGTACAATCTATATT+TGG - 10755:11192-11211 MS.gene00478:CDS 25.0%
! CCACATTTGACAAAAAATTT+AGG + 10755:10804-10823 MS.gene00478:intergenic 25.0%
! TTCTGTATATAATCACACAA+TGG + 10755:9436-9455 MS.gene00478:intergenic 25.0%
! TTTATTACTCAAAATGTTGC+AGG - 10755:10934-10953 MS.gene00478:intron 25.0%
! TTTCGGTTTCTTATATTGAT+CGG - 10755:9554-9573 MS.gene00478:intron 25.0%
!! CAAATAGTATCATCTAAGAT+AGG - 10755:10511-10530 MS.gene00478:intron 25.0%
!!! ATGCGAGTGTTATTTTAATT+TGG + 10755:9738-9757 MS.gene00478:intergenic 25.0%
!!! CCTAAATTTTTTGTCAAATG+TGG - 10755:10801-10820 MS.gene00478:CDS 25.0%
!!! TGCGAGTGTTATTTTAATTT+GGG + 10755:9737-9756 MS.gene00478:intergenic 25.0%
!!! TTTCACAAAGAAAGTATCTT+TGG - 10755:10844-10863 MS.gene00478:intron 25.0%
AAAAAGTTAGTAAGGTTGCA+TGG + 10755:10735-10754 None:intergenic 30.0%
AAAAGTTAGTAAGGTTGCAT+GGG + 10755:10734-10753 None:intergenic 30.0%
AACCGAAAAATAAAGCGTAT+CGG + 10755:9542-9561 None:intergenic 30.0%
AACCTATAACTACTATGAGA+TGG + 10755:10373-10392 None:intergenic 30.0%
AATTTGGGTGCAAACAAATT+GGG + 10755:9722-9741 MS.gene00478:intergenic 30.0%
ACCTATAACTACTATGAGAT+GGG + 10755:10372-10391 MS.gene00478:intergenic 30.0%
ACGAATTAAAACATTACCCA+AGG + 10755:11178-11197 MS.gene00478:intergenic 30.0%
AGAAGATTCATCACTAAAGT+TGG - 10755:10309-10328 MS.gene00478:intron 30.0%
AGACAGAAGTTACAATTACT+CGG - 10755:9601-9620 MS.gene00478:intron 30.0%
AGATACTTTCTTTGTGAAAG+TGG + 10755:10843-10862 MS.gene00478:intergenic 30.0%
AGTAGTTATAGGTTATGACA+TGG - 10755:10379-10398 MS.gene00478:intron 30.0%
ATATCTGGTGAATTCATAGA+TGG + 10755:11271-11290 MS.gene00478:intergenic 30.0%
CAGGAATTAATCTGGTATAT+TGG - 10755:9845-9864 MS.gene00478:intron 30.0%
CTACAATAAAGACATTCCTA+AGG - 10755:10194-10213 MS.gene00478:intron 30.0%
CTTAGGAATGTCTTTATTGT+AGG + 10755:10196-10215 MS.gene00478:intergenic 30.0%
GAAAATGTCAGGAATTAATC+TGG - 10755:9837-9856 MS.gene00478:intron 30.0%
GAAGTCATTGAAGTTTGAAT+TGG - 10755:10165-10184 MS.gene00478:intron 30.0%
TAATTTGGGTGCAAACAAAT+TGG + 10755:9723-9742 MS.gene00478:intergenic 30.0%
TATAGGTTATGACATGGATT+CGG - 10755:10385-10404 MS.gene00478:intron 30.0%
TATTGAATGAACTATCCAGA+AGG + 10755:10663-10682 MS.gene00478:intergenic 30.0%
TGGACTATAAACAAATTGTG+AGG - 10755:9865-9884 MS.gene00478:intron 30.0%
TTTGTTGCATTCTATAATGG+TGG - 10755:9761-9780 MS.gene00478:intron 30.0%
! AATATACATGACTTGTACCT+TGG - 10755:11321-11340 MS.gene00478:CDS 30.0%
! ATAGTTGAACTTTGAGCTTT+TGG - 10755:10614-10633 MS.gene00478:CDS 30.0%
! ATGTTCAACTTTTAGTAGTG+TGG - 10755:10423-10442 MS.gene00478:intron 30.0%
! GATTTTGGATGGTATTGTTT+TGG - 10755:10098-10117 MS.gene00478:intron 30.0%
! TACTTTTATCTCTTTTGTGC+AGG - 10755:11009-11028 MS.gene00478:intron 30.0%
! TAGTTGAACTTTGAGCTTTT+GGG - 10755:10615-10634 MS.gene00478:CDS 30.0%
! TGAGGACTTTTGTTACATTA+CGG - 10755:9987-10006 MS.gene00478:intron 30.0%
! TGTGTTGTTGAATGTTTGTT+TGG - 10755:10061-10080 MS.gene00478:intron 30.0%
! TGTTCAACTTTTAGTAGTGT+GGG - 10755:10424-10443 MS.gene00478:intron 30.0%
!! GTTGAATGTTTGTTTGGTTT+TGG - 10755:10067-10086 MS.gene00478:intron 30.0%
!! TGGTTTGTTGCATTCTATAA+TGG - 10755:9758-9777 MS.gene00478:CDS 30.0%
!! TTGATTAAAGGTTTTGACCA+TGG - 10755:10129-10148 MS.gene00478:intron 30.0%
!!! TTCCGATACGCTTTATTTTT+CGG - 10755:9537-9556 MS.gene00478:intron 30.0%
ACCCATCTCATAGTAGTTAT+AGG - 10755:10368-10387 MS.gene00478:intron 35.0%
ATATAAACCTGCAGACTTGA+AGG - 10755:11287-11306 MS.gene00478:CDS 35.0%
CAATAAAACACACATGCCTT+AGG + 10755:10213-10232 MS.gene00478:intergenic 35.0%
GGCTGAATTCTGTAATCAAA+TGG + 10755:11250-11269 MS.gene00478:intergenic 35.0%
TCATTGAAGTTTGAATTGGG+TGG - 10755:10169-10188 MS.gene00478:intron 35.0%
! ATCACTAAAGTTGGTCTAGA+GGG - 10755:10318-10337 MS.gene00478:intron 35.0%
! GTTAGTCTGCAGAACAAAAT+AGG + 10755:10707-10726 MS.gene00478:intergenic 35.0%
! TTTTAGTAGTGTGGGACTTT+TGG - 10755:10432-10451 MS.gene00478:intron 35.0%
!! ATTAAAGGTTTTGACCATGG+AGG - 10755:10132-10151 MS.gene00478:intron 35.0%
!! GTATCTTTGGTTTGTGCTAT+AGG - 10755:10857-10876 MS.gene00478:intron 35.0%
!!! GTTTTGGATCTTGCTGATTT+TGG - 10755:10083-10102 MS.gene00478:intron 35.0%
AAAGTGGCTACTAGCTAGAT+TGG + 10755:10827-10846 None:intergenic 40.0%
AAATTGGGAGGGACCAAATT+AGG + 10755:9707-9726 None:intergenic 40.0%
ATTACCCAAGGATGAGTCTT+CGG + 10755:11166-11185 MS.gene00478:intergenic 40.0%
CAAACCAAAGTCTCCAGATT+TGG + 10755:10984-11003 MS.gene00478:intergenic 40.0%
CAAGTCTGCAGGTTTATATC+TGG + 10755:11286-11305 MS.gene00478:intergenic 40.0%
CAATACATACTCCAAGGAAG+AGG - 10755:10011-10030 MS.gene00478:intron 40.0%
CCAGATTTGGCACACATAAA+CGG + 10755:10971-10990 MS.gene00478:intergenic 40.0%
CTTCAAAATATCAGCCTCCA+TGG + 10755:10149-10168 MS.gene00478:intergenic 40.0%
TAACAAAAGTCCTCAACCTC+AGG + 10755:9982-10001 MS.gene00478:intergenic 40.0%
TACAAGATTCACCTCTTCCT+TGG + 10755:10025-10044 MS.gene00478:intergenic 40.0%
TACGGACAATACATACTCCA+AGG - 10755:10005-10024 MS.gene00478:intron 40.0%
TGGCACACATAAACGGAAAT+GGG + 10755:10964-10983 MS.gene00478:intergenic 40.0%
TGTGAAGTTCTTGCCTTCTA+TGG - 10755:11099-11118 MS.gene00478:intron 40.0%
TTGGCACACATAAACGGAAA+TGG + 10755:10965-10984 MS.gene00478:intergenic 40.0%
! CATCACTAAAGTTGGTCTAG+AGG - 10755:10317-10336 MS.gene00478:intron 40.0%
! TACATGACTTGTACCTTGGT+AGG - 10755:11325-11344 MS.gene00478:CDS 40.0%
! TTGAACTTTGAGCTTTTGGG+AGG - 10755:10618-10637 MS.gene00478:CDS 40.0%
!! GTGGGTTTTGTCATGTCATT+TGG - 10755:10587-10606 MS.gene00478:intron 40.0%
!! TGAACTTTGAGCTTTTGGGA+GGG - 10755:10619-10638 MS.gene00478:CDS 40.0%
!!! TGGATCTTGCTGATTTTGGA+TGG - 10755:10087-10106 MS.gene00478:intron 40.0%
ACACATTCCTTCAAGTCTGC+AGG + 10755:11297-11316 MS.gene00478:intergenic 45.0%
CCGTTTATGTGTGCCAAATC+TGG - 10755:10968-10987 MS.gene00478:intron 45.0%
GAAGTTCTTGCCTTCTATGG+TGG - 10755:11102-11121 MS.gene00478:intron 45.0%
GACTTGTACCTTGGTAGGAA+AGG - 10755:11330-11349 MS.gene00478:CDS 45.0%
GAGATGGGAATTGAACCTTC+TGG - 10755:10645-10664 MS.gene00478:CDS 45.0%
GATGTTAACGCGAGTATGAG+GGG - 10755:9466-9485 MS.gene00478:CDS 45.0%
GGATGTTAACGCGAGTATGA+GGG - 10755:9465-9484 MS.gene00478:CDS 45.0%
TGAAGAGATTAAGCCACCTG+AGG - 10755:9963-9982 MS.gene00478:intron 45.0%
TGGGTGCAAACAAATTGGGA+GGG + 10755:9718-9737 MS.gene00478:intergenic 45.0%
TGTGCCAAATCTGGAGACTT+TGG - 10755:10977-10996 MS.gene00478:intron 45.0%
TTACCCAAGGATGAGTCTTC+GGG + 10755:11165-11184 MS.gene00478:intergenic 45.0%
TTGGGTGCAAACAAATTGGG+AGG + 10755:9719-9738 MS.gene00478:intergenic 45.0%
TTGTACCTTGGTAGGAAAGG+CGG - 10755:11333-11352 MS.gene00478:CDS 45.0%
AAGCCCGAAGACTCATCCTT+GGG - 10755:11159-11178 MS.gene00478:intron 50.0%
ACTGATGCAGCCACCATAGA+AGG + 10755:11115-11134 MS.gene00478:intergenic 50.0%
CAAAAGTCCTCAACCTCAGG+TGG + 10755:9979-9998 MS.gene00478:intergenic 50.0%
CCAACAAACTGAGCTCAGCA+AGG + 10755:11069-11088 MS.gene00478:intergenic 50.0%
CCTTGCTGAGCTCAGTTTGT+TGG - 10755:11066-11085 MS.gene00478:intron 50.0%
GAATACCTCTGCTGCATCTC+TGG - 10755:10758-10777 MS.gene00478:intron 50.0%
GATTAAGCCACCTGAGGTTG+AGG - 10755:9969-9988 MS.gene00478:intron 50.0%
GCTCAGCAAGGTAAGAGCAA+AGG + 10755:11057-11076 MS.gene00478:intergenic 50.0%
GGGATGTTAACGCGAGTATG+AGG - 10755:9464-9483 MS.gene00478:CDS 50.0%
TAAGCCCGAAGACTCATCCT+TGG - 10755:11158-11177 MS.gene00478:intron 50.0%
!! ACTCGGTGTTGCTTCGATGT+TGG - 10755:9618-9637 MS.gene00478:intron 50.0%
!! CTTTTGGGAGGGTCTGAGAT+GGG - 10755:10630-10649 MS.gene00478:CDS 50.0%
!! GAGTATGAGGGGTGTTCTTG+TGG - 10755:9477-9496 MS.gene00478:CDS 50.0%
!! GGGTGTTCTTGTGGATTGGT+TGG - 10755:9486-9505 MS.gene00478:CDS 50.0%
!! TGAGGGGTGTTCTTGTGGAT+TGG - 10755:9482-9501 MS.gene00478:CDS 50.0%
AAGAGCCGCCTTTCCTACCA+AGG + 10755:11341-11360 None:intergenic 55.0%
TACCTCTGCTGCATCTCTGG+TGG - 10755:10761-10780 MS.gene00478:intron 55.0%
!! GCTTTTGGGAGGGTCTGAGA+TGG - 10755:10629-10648 MS.gene00478:CDS 55.0%
TGCCACCAGAGATGCAGCAG+AGG + 10755:10766-10785 MS.gene00478:intergenic 60.0%


Chromosome Type Strat End Strand Name
10755 gene 9415 11395 9415 ID=MS.gene00478
10755 mRNA 9415 11395 9415 ID=MS.gene00478.t1;Parent=MS.gene00478
10755 exon 11163 11395 11163 ID=MS.gene00478.t1.exon1;Parent=MS.gene00478.t1
10755 CDS 11163 11395 11163 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
10755 exon 10778 10853 10778 ID=MS.gene00478.t1.exon2;Parent=MS.gene00478.t1
10755 CDS 10778 10853 10778 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
10755 exon 10595 10671 10595 ID=MS.gene00478.t1.exon3;Parent=MS.gene00478.t1
10755 CDS 10595 10671 10595 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
10755 exon 10463 10499 10463 ID=MS.gene00478.t1.exon4;Parent=MS.gene00478.t1
10755 CDS 10463 10499 10463 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
10755 exon 9630 9779 9630 ID=MS.gene00478.t1.exon5;Parent=MS.gene00478.t1
10755 CDS 9630 9779 9630 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
10755 exon 9415 9549 9415 ID=MS.gene00478.t1.exon6;Parent=MS.gene00478.t1
10755 CDS 9415 9549 9415 ID=cds.MS.gene00478.t1;Parent=MS.gene00478.t1
Gene Sequence

>MS.gene00478

GTTGATTCTAGTAAGAGGCCATTGTGTGATTATATACAGAAAGTTCAAAGGGATGTTAACGCGAGTATGAGGGGTGTTCTTGTGGATTGGTTGGTTGAAGTTGCTGAAGAATACAAGCTTGTTTCCGATACGCTTTATTTTTCGGTTTCTTATATTGATCGGTTTTTGTCGTTGAATGATTTAACTAGACAGAAGTTACAATTACTCGGTGTTGCTTCGATGTTGGTTGCTTCGTAAGTTTGTTTTTGTTTGTTGTTTTGATTTGTACTTTTGTATTGATGAATAAATACCTAATTTGGTCCCTCCCAATTTGTTTGCACCCAAATTAAAATAACACTCGCATTGGTTTGTTGCATTCTATAATGGTGGTTAAATTAGTTCCTCTATTAATTTTGACCCATTTTAACAGAGATTACTCTTATGAAAATGTCAGGAATTAATCTGGTATATTGGACTATAAACAAATTGTGAGGAGCCAAGATGTGATTTTATTGTTTATTTATTATTTATGCTTATTGATTTTTTATTTGTTTTGGATGTAGAAAATATGAAGAGATTAAGCCACCTGAGGTTGAGGACTTTTGTTACATTACGGACAATACATACTCCAAGGAAGAGGTGAATCTTGTAGTTTAAGTTTTTTGTTTGTGTTGTTGAATGTTTGTTTGGTTTTGGATCTTGCTGATTTTGGATGGTATTGTTTTGGTATTTTGTTTGATTAAAGGTTTTGACCATGGAGGCTGATATTTTGAAGTCATTGAAGTTTGAATTGGGTGGTCCTACAATAAAGACATTCCTAAGGCATGTGTGTTTTATTGATTATGTTTCTTTGTATGTTGAATGGAATTGTTTTTGAATGTTAGCTCACTTTTCATTTTTTCTTTTTCTGTTTGCAGAAGATTCATCACTAAAGTTGGTCTAGAGGGTGTTGATGTAAGTTATCTCATTCTTCAACCCATCTCATAGTAGTTATAGGTTATGACATGGATTCGGTGATTATGTGTGCTTATGTTCAACTTTTAGTAGTGTGGGACTTTTGGTTACTTTTGCTATTGTGTGTGCTTATGTCTTTATGACATTGATTATTCTCTCTTATCAAATAGTATCATCTAAGATAGGGAGATTGTTTGTGAAAATAAGAGATGTTGTATATAAATAGAAAGAGAATTAGAGTGGGTTTTGTCATGTCATTTGGAGAAATAGTTGAACTTTGAGCTTTTGGGAGGGTCTGAGATGGGAATTGAACCTTCTGGATAGTTCATTCAATACTAATTCATGAAAATCAAATTCCTATTTTGTTCTGCAGACTAACAAAACCCATGCAACCTTACTAACTTTTTTAAGAATACCTCTGCTGCATCTCTGGTGGCAAAGAGATGTTTCAACCCTAAATTTTTTGTCAAATGTGGCCAATCTAGCTAGTAGCCACTTTCACAAAGAAAGTATCTTTGGTTTGTGCTATAGGAAGTTTCAAATCTAGTTATCCAGAAGTTTGAAATCAATTTTACTTGGATTATTATTTATTACTCAAAATGTTGCAGGCAAACCCATTTCCGTTTATGTGTGCCAAATCTGGAGACTTTGGTTTGTTTAATACTTTTATCTCTTTTGTGCAGGCTTCTGAGTTGCAGTTTGAGTTCCTTTGCTCTTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTGAAGTTCTTGCCTTCTATGGTGGCTGCATCAGTTGTATTTCTTGCTCGTTTTATGTTAAGCCCGAAGACTCATCCTTGGGTAATGTTTTAATTCGTGTACAATCTATATTTGGTATTTGACTTTGACACAGTTACTAAAATATTTCCATTTGATTACAGAATTCAGCCATCTATGAATTCACCAGATATAAACCTGCAGACTTGAAGGAATGTGTTCTAAATATACATGACTTGTACCTTGGTAGGAAAGGCGGCTCTTTGCAAGCTGTGAGAGATAAATACAAACAGCATAAG
Protein sequence

>MS.gene00478.t1

VDSSKRPLCDYIQKVQRDVNASMRGVLVDWLVEVAEEYKLVSDTLYFSVSYIDRFLSLNDLTRQKLQLLGVASMLVASKYEEIKPPEVEDFCYITDNTYSKEEVLTMEADILKSLKFELGGPTIKTFLRRFITKVGLEGVDASELQFEFLCSYLAELSLLDYNCVKFLPSMVAASVVFLARFMLSPKTHPWNSAIYEFTRYKPADLKECVLNIHDLYLGRKGGSLQAVRDKYKQHK