Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00474.t1 | XP_024636078.1 | 93.4 | 364 | 20 | 1 | 1 | 360 | 1 | 364 | 5.40E-186 | 660.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00474.t1 | Q9FMH5 | 59.0 | 356 | 139 | 4 | 1 | 354 | 1 | 351 | 2.1e-109 | 397.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00474.t1 | A0A396JGA0 | 93.4 | 364 | 20 | 1 | 1 | 360 | 1 | 364 | 3.9e-186 | 660.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00474.t1 | MTR_1g018680 | 94.536 | 366 | 11 | 3 | 1 | 360 | 1 | 363 | 0.0 | 675 |
| MS.gene00474.t1 | MTR_3g102520 | 55.917 | 338 | 133 | 5 | 30 | 354 | 23 | 357 | 2.94e-126 | 367 |
| MS.gene00474.t1 | MTR_3g102530 | 54.755 | 347 | 145 | 4 | 16 | 353 | 6 | 349 | 6.16e-123 | 358 |
| MS.gene00474.t1 | MTR_3g102510 | 53.988 | 326 | 139 | 5 | 30 | 354 | 23 | 338 | 2.79e-116 | 341 |
| MS.gene00474.t1 | MTR_3g102560 | 53.824 | 340 | 137 | 5 | 14 | 353 | 5 | 324 | 2.71e-115 | 338 |
| MS.gene00474.t1 | MTR_3g088415 | 53.597 | 278 | 124 | 3 | 78 | 354 | 231 | 504 | 2.12e-104 | 316 |
| MS.gene00474.t1 | MTR_3g102540 | 55.039 | 258 | 109 | 2 | 91 | 348 | 13 | 263 | 6.67e-97 | 289 |
| MS.gene00474.t1 | MTR_3g088405 | 49.281 | 278 | 136 | 3 | 79 | 354 | 235 | 509 | 2.47e-94 | 290 |
| MS.gene00474.t1 | MTR_3g107970 | 51.273 | 275 | 131 | 2 | 76 | 350 | 202 | 473 | 1.32e-92 | 285 |
| MS.gene00474.t1 | MTR_2g102520 | 51.111 | 270 | 127 | 3 | 78 | 345 | 206 | 472 | 3.43e-92 | 284 |
| MS.gene00474.t1 | MTR_1g011470 | 50.368 | 272 | 131 | 3 | 77 | 347 | 151 | 419 | 3.75e-89 | 275 |
| MS.gene00474.t1 | MTR_2g102550 | 47.273 | 275 | 142 | 2 | 71 | 345 | 151 | 422 | 2.01e-87 | 270 |
| MS.gene00474.t1 | MTR_3g088415 | 57.944 | 214 | 85 | 3 | 78 | 290 | 231 | 440 | 2.84e-84 | 263 |
| MS.gene00474.t1 | MTR_3g088415 | 59.064 | 171 | 66 | 2 | 78 | 248 | 231 | 397 | 6.14e-67 | 216 |
| MS.gene00474.t1 | MTR_7g089080 | 39.689 | 257 | 150 | 4 | 87 | 343 | 199 | 450 | 8.00e-54 | 191 |
| MS.gene00474.t1 | MTR_5g088980 | 38.211 | 246 | 141 | 5 | 87 | 331 | 165 | 400 | 1.84e-49 | 171 |
| MS.gene00474.t1 | MTR_8g074000 | 35.827 | 254 | 153 | 4 | 87 | 340 | 176 | 419 | 5.54e-49 | 171 |
| MS.gene00474.t1 | MTR_5g023790 | 36.015 | 261 | 157 | 4 | 80 | 340 | 165 | 415 | 7.51e-48 | 167 |
| MS.gene00474.t1 | MTR_5g023790 | 39.801 | 201 | 112 | 3 | 80 | 280 | 165 | 356 | 1.16e-43 | 155 |
| MS.gene00474.t1 | MTR_5g023790 | 42.105 | 152 | 85 | 2 | 80 | 231 | 165 | 313 | 3.03e-35 | 132 |
| MS.gene00474.t1 | MTR_3g060410 | 33.333 | 231 | 141 | 6 | 118 | 340 | 131 | 356 | 3.27e-25 | 105 |
| MS.gene00474.t1 | MTR_3g060770 | 33.937 | 221 | 129 | 6 | 118 | 333 | 56 | 264 | 8.73e-23 | 97.1 |
| MS.gene00474.t1 | MTR_3g061680 | 36.224 | 196 | 115 | 5 | 118 | 308 | 46 | 236 | 4.96e-22 | 94.7 |
| MS.gene00474.t1 | MTR_3g060820 | 35.714 | 196 | 116 | 5 | 118 | 308 | 46 | 236 | 5.38e-22 | 94.7 |
| MS.gene00474.t1 | MTR_3g060400 | 32.035 | 231 | 144 | 6 | 118 | 340 | 52 | 277 | 1.14e-21 | 94.0 |
| MS.gene00474.t1 | MTR_3g460990 | 32.035 | 231 | 144 | 6 | 118 | 340 | 52 | 277 | 1.14e-21 | 94.0 |
| MS.gene00474.t1 | MTR_5g044040 | 46.667 | 75 | 40 | 0 | 144 | 218 | 7 | 81 | 8.18e-19 | 82.0 |
| MS.gene00474.t1 | MTR_1g032850 | 30.366 | 191 | 120 | 6 | 123 | 309 | 372 | 553 | 3.98e-15 | 77.0 |
| MS.gene00474.t1 | MTR_1g107535 | 29.412 | 204 | 105 | 8 | 85 | 277 | 88 | 263 | 6.88e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene00474.t1 | AT5G43080 | 59.714 | 350 | 134 | 4 | 7 | 354 | 7 | 351 | 2.44e-146 | 418 |
| MS.gene00474.t1 | AT1G47230 | 58.172 | 361 | 133 | 6 | 7 | 354 | 6 | 361 | 7.57e-144 | 412 |
| MS.gene00474.t1 | AT5G43080 | 58.857 | 350 | 132 | 5 | 7 | 354 | 7 | 346 | 2.75e-142 | 407 |
| MS.gene00474.t1 | AT1G47230 | 58.011 | 362 | 133 | 7 | 7 | 354 | 6 | 362 | 4.12e-142 | 407 |
| MS.gene00474.t1 | AT1G47210 | 56.303 | 357 | 135 | 5 | 16 | 354 | 15 | 368 | 1.83e-137 | 396 |
| MS.gene00474.t1 | AT1G47220 | 56.711 | 298 | 120 | 2 | 57 | 354 | 34 | 322 | 1.87e-116 | 341 |
| MS.gene00474.t1 | AT1G44110 | 54.545 | 275 | 120 | 3 | 80 | 353 | 187 | 457 | 3.21e-102 | 309 |
| MS.gene00474.t1 | AT5G25380 | 50.719 | 278 | 126 | 3 | 79 | 352 | 165 | 435 | 7.36e-97 | 295 |
| MS.gene00474.t1 | AT5G25380 | 50.719 | 278 | 126 | 3 | 79 | 352 | 165 | 435 | 7.36e-97 | 295 |
| MS.gene00474.t1 | AT5G25380 | 50.719 | 278 | 126 | 3 | 79 | 352 | 171 | 441 | 1.27e-96 | 294 |
| MS.gene00474.t1 | AT5G11300 | 44.602 | 352 | 181 | 6 | 10 | 352 | 88 | 434 | 4.80e-95 | 290 |
| MS.gene00474.t1 | AT1G80370 | 53.053 | 262 | 120 | 2 | 79 | 340 | 189 | 447 | 1.53e-92 | 285 |
| MS.gene00474.t1 | AT1G15570 | 52.060 | 267 | 125 | 2 | 79 | 345 | 180 | 443 | 6.39e-92 | 282 |
| MS.gene00474.t1 | AT5G25380 | 50.958 | 261 | 117 | 3 | 79 | 335 | 165 | 418 | 1.22e-91 | 281 |
| MS.gene00474.t1 | AT1G77390 | 48.175 | 274 | 139 | 2 | 80 | 353 | 171 | 441 | 2.32e-88 | 273 |
| MS.gene00474.t1 | AT5G11300 | 43.289 | 298 | 158 | 5 | 4 | 295 | 85 | 377 | 1.47e-76 | 242 |
| MS.gene00474.t1 | AT3G11520 | 36.145 | 332 | 192 | 7 | 17 | 340 | 82 | 401 | 2.36e-51 | 176 |
| MS.gene00474.t1 | AT3G11520 | 38.047 | 297 | 164 | 7 | 17 | 305 | 82 | 366 | 6.85e-50 | 172 |
| MS.gene00474.t1 | AT5G06150 | 37.970 | 266 | 151 | 6 | 87 | 351 | 182 | 434 | 2.58e-49 | 172 |
| MS.gene00474.t1 | AT2G26760 | 37.970 | 266 | 154 | 5 | 87 | 351 | 130 | 385 | 4.08e-46 | 162 |
| MS.gene00474.t1 | AT1G20610 | 34.211 | 266 | 164 | 5 | 80 | 345 | 170 | 424 | 1.30e-45 | 161 |
| MS.gene00474.t1 | AT1G47210 | 49.444 | 180 | 71 | 4 | 16 | 177 | 15 | 192 | 1.31e-45 | 155 |
| MS.gene00474.t1 | AT4G37490 | 37.262 | 263 | 148 | 8 | 87 | 343 | 165 | 416 | 1.52e-44 | 159 |
| MS.gene00474.t1 | AT1G76310 | 34.902 | 255 | 155 | 5 | 87 | 340 | 177 | 421 | 2.09e-43 | 155 |
| MS.gene00474.t1 | AT2G17620 | 37.354 | 257 | 145 | 5 | 87 | 340 | 171 | 414 | 2.31e-42 | 153 |
| MS.gene00474.t1 | AT1G16330 | 33.457 | 269 | 166 | 5 | 66 | 331 | 371 | 629 | 9.31e-42 | 154 |
| MS.gene00474.t1 | AT4G35620 | 38.039 | 255 | 148 | 5 | 87 | 341 | 172 | 416 | 1.50e-41 | 150 |
| MS.gene00474.t1 | AT1G76310 | 37.879 | 198 | 113 | 4 | 87 | 283 | 177 | 365 | 1.53e-39 | 144 |
| MS.gene00474.t1 | AT1G76310 | 31.802 | 283 | 154 | 6 | 87 | 340 | 177 | 449 | 8.58e-38 | 141 |
| MS.gene00474.t1 | AT4G35620 | 40.580 | 207 | 113 | 5 | 87 | 293 | 172 | 368 | 1.09e-36 | 137 |
| MS.gene00474.t1 | AT5G06150 | 43.448 | 145 | 78 | 1 | 87 | 231 | 182 | 322 | 1.14e-35 | 133 |
| MS.gene00474.t1 | AT1G76310 | 41.781 | 146 | 81 | 3 | 87 | 231 | 177 | 319 | 1.47e-32 | 124 |
| MS.gene00474.t1 | AT1G20590 | 34.463 | 177 | 105 | 3 | 151 | 323 | 66 | 235 | 7.74e-25 | 102 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 1.99e-17 | 84.0 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 2.17e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 2.26e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 2.26e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 2.26e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 272 | 392 | 2.26e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 269 | 389 | 2.43e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 269 | 389 | 2.43e-17 | 83.6 |
| MS.gene00474.t1 | AT1G34460 | 33.103 | 145 | 73 | 2 | 87 | 231 | 258 | 378 | 2.55e-17 | 83.6 |
| MS.gene00474.t1 | AT1G14750 | 28.736 | 261 | 166 | 9 | 65 | 319 | 163 | 409 | 1.10e-14 | 75.1 |
| MS.gene00474.t1 | AT1G14750 | 27.969 | 261 | 169 | 8 | 65 | 319 | 163 | 410 | 1.20e-14 | 75.1 |
| MS.gene00474.t1 | AT1G14750 | 30.348 | 201 | 129 | 6 | 122 | 319 | 386 | 578 | 1.58e-14 | 75.1 |
| MS.gene00474.t1 | AT1G14750 | 30.366 | 191 | 123 | 5 | 122 | 309 | 386 | 569 | 6.13e-14 | 73.6 |
| MS.gene00474.t1 | AT1G70210 | 30.726 | 179 | 111 | 5 | 106 | 276 | 64 | 237 | 8.33e-11 | 63.2 |
Find 70 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAAGTTCTTGCCTTCTA+TGG | 0.257368 | 1.4:-4569433 | MS.gene00474:CDS |
| CGCGTGGGGTTAACGCTCTT+TGG | 0.262421 | 1.4:+4571523 | None:intergenic |
| CTTAGGAATGTCTTTATTGT+AGG | 0.290255 | 1.4:+4570339 | None:intergenic |
| CCTTGCTGAGCTCAGTTTGT+TGG | 0.292382 | 1.4:-4569466 | MS.gene00474:CDS |
| AACTCCGGTACCGGAGAAAT+TGG | 0.300734 | 1.4:-4571326 | MS.gene00474:CDS |
| CAAGTCTGCAGGTTTATATC+TGG | 0.333404 | 1.4:+4569249 | None:intergenic |
| GAAGTCATTGAAGTTTGAAT+TGG | 0.360491 | 1.4:-4570367 | MS.gene00474:CDS |
| GGGATGTTAACGCGAGTATG+AGG | 0.393481 | 1.4:-4571068 | MS.gene00474:CDS |
| ATATAAACCTGCAGACTTGA+AGG | 0.399847 | 1.4:-4569245 | MS.gene00474:CDS |
| GGGTGTTCTTGTGGATTGGT+TGG | 0.400845 | 1.4:-4571046 | MS.gene00474:CDS |
| ACTGATGCAGCCACCATAGA+AGG | 0.402548 | 1.4:+4569420 | None:intergenic |
| TTCTCCAATTTCTCCGGTAC+CGG | 0.411453 | 1.4:+4571322 | None:intergenic |
| ATATCTGGTGAATTCATAGA+TGG | 0.420121 | 1.4:+4569264 | None:intergenic |
| TTACCCAAGGATGAGTCTTC+GGG | 0.425884 | 1.4:+4569370 | None:intergenic |
| ATTACCCAAGGATGAGTCTT+CGG | 0.430153 | 1.4:+4569369 | None:intergenic |
| TTTAGGTTGATTCTAGTAAG+AGG | 0.436695 | 1.4:-4571122 | MS.gene00474:intron |
| TCACGTTGAGGGCGGCGCGT+GGG | 0.441478 | 1.4:+4571508 | None:intergenic |
| TACAAGATTCACCTCTTCCT+TGG | 0.443619 | 1.4:+4570510 | None:intergenic |
| CTCCGGTACCGGAGTTTCAT+CGG | 0.445846 | 1.4:+4571333 | None:intergenic |
| TCGAATTTCTCCAATTTCTC+CGG | 0.446675 | 1.4:+4571316 | None:intergenic |
| TGAGGGGTGTTCTTGTGGAT+TGG | 0.457804 | 1.4:-4571050 | MS.gene00474:CDS |
| AGAAGATTCATCACTAAAGT+TGG | 0.459150 | 1.4:-4570223 | MS.gene00474:CDS |
| ACACATTCCTTCAAGTCTGC+AGG | 0.460260 | 1.4:+4569238 | None:intergenic |
| CTCCGATGAAACTCCGGTAC+CGG | 0.462507 | 1.4:-4571335 | MS.gene00474:CDS |
| TTTCGGTTTCTTATATTGAT+CGG | 0.465083 | 1.4:-4570978 | MS.gene00474:CDS |
| AAGTCATTGAAGTTTGAATT+GGG | 0.468127 | 1.4:-4570366 | MS.gene00474:CDS |
| CACGTTGAGGGCGGCGCGTG+GGG | 0.493799 | 1.4:+4571509 | None:intergenic |
| GATTAAGCCACCTGAGGTTG+AGG | 0.495688 | 1.4:-4570563 | MS.gene00474:CDS |
| AGATAAATACAAACAGCATA+AGG | 0.498310 | 1.4:-4569158 | MS.gene00474:intron |
| AATATACATGACTTGTACCT+TGG | 0.507114 | 1.4:-4569211 | MS.gene00474:CDS |
| TTGTTCACATAGTGCAGCTA+CGG | 0.511501 | 1.4:+4571471 | None:intergenic |
| TTCACGTTGAGGGCGGCGCG+TGG | 0.513771 | 1.4:+4571507 | None:intergenic |
| GGCAACAACACCCTCTCCCC+CGG | 0.520065 | 1.4:-4568967 | MS.gene00474:CDS |
| CTTCAAAATATCAGCCTCCA+TGG | 0.525850 | 1.4:+4570386 | None:intergenic |
| GAGTATGAGGGGTGTTCTTG+TGG | 0.531293 | 1.4:-4571055 | MS.gene00474:CDS |
| ATCACTAAAGTTGGTCTAGA+GGG | 0.532834 | 1.4:-4570214 | MS.gene00474:CDS |
| AAGCCCGAAGACTCATCCTT+GGG | 0.535304 | 1.4:-4569373 | MS.gene00474:intron |
| TAACAAAAGTCCTCAACCTC+AGG | 0.540151 | 1.4:+4570553 | None:intergenic |
| GAAGTTCTTGCCTTCTATGG+TGG | 0.548750 | 1.4:-4569430 | MS.gene00474:CDS |
| TAAGCCCGAAGACTCATCCT+TGG | 0.550073 | 1.4:-4569374 | MS.gene00474:CDS |
| GGATGTTAACGCGAGTATGA+GGG | 0.553144 | 1.4:-4571067 | MS.gene00474:CDS |
| ACTCGGTGTTGCTTCGATGT+TGG | 0.553532 | 1.4:-4570914 | MS.gene00474:CDS |
| ATCAAACTCCGATGAAACTC+CGG | 0.553690 | 1.4:-4571341 | MS.gene00474:CDS |
| ATTATATACAGAAAGTTCAA+AGG | 0.558828 | 1.4:-4571089 | MS.gene00474:CDS |
| TTATATACAGAAAGTTCAAA+GGG | 0.568073 | 1.4:-4571088 | MS.gene00474:CDS |
| TTACGATTATCTTCGTAACA+TGG | 0.581267 | 1.4:-4571257 | MS.gene00474:CDS |
| GACTTGTACCTTGGTAGGAA+AGG | 0.582896 | 1.4:-4569202 | MS.gene00474:CDS |
| CAATACATACTCCAAGGAAG+AGG | 0.589667 | 1.4:-4570521 | MS.gene00474:intron |
| AAACGAAAACGTGTTCCTCT+CGG | 0.594016 | 1.4:-4571442 | MS.gene00474:CDS |
| CATCACTAAAGTTGGTCTAG+AGG | 0.599941 | 1.4:-4570215 | MS.gene00474:CDS |
| GCTCAGCAAGGTAAGAGCAA+AGG | 0.603798 | 1.4:+4569478 | None:intergenic |
| TTGGTCACAGTTCAAATGCG+TGG | 0.611335 | 1.4:-4568988 | MS.gene00474:intron |
| TACATGACTTGTACCTTGGT+AGG | 0.612523 | 1.4:-4569207 | MS.gene00474:CDS |
| CTACAATAAAGACATTCCTA+AGG | 0.613211 | 1.4:-4570338 | MS.gene00474:intron |
| CAAAAGTCCTCAACCTCAGG+TGG | 0.618973 | 1.4:+4570556 | None:intergenic |
| AGACAGAAGTTACAATTACT+CGG | 0.626618 | 1.4:-4570931 | MS.gene00474:CDS |
| TCATTGAAGTTTGAATTGGG+TGG | 0.631240 | 1.4:-4570363 | MS.gene00474:CDS |
| GATGTTAACGCGAGTATGAG+GGG | 0.631509 | 1.4:-4571066 | MS.gene00474:CDS |
| TCTTTGCTTCACGTTGAGGG+CGG | 0.632157 | 1.4:+4571500 | None:intergenic |
| TACGGACAATACATACTCCA+AGG | 0.633308 | 1.4:-4570527 | MS.gene00474:CDS |
| TTGTACCTTGGTAGGAAAGG+CGG | 0.635313 | 1.4:-4569199 | MS.gene00474:CDS |
| CGATTATCTTCGTAACATGG+AGG | 0.645441 | 1.4:-4571254 | MS.gene00474:intron |
| AAGAGCCGCCTTTCCTACCA+AGG | 0.647189 | 1.4:+4569194 | None:intergenic |
| CCAACAAACTGAGCTCAGCA+AGG | 0.668066 | 1.4:+4569466 | None:intergenic |
| TCGTTTGTTATTTCACCGAG+AGG | 0.670866 | 1.4:+4571427 | None:intergenic |
| TTCTGTATATAATCACACAA+TGG | 0.674639 | 1.4:+4571099 | None:intergenic |
| AAAGAAAGAGATATCTCCGG+GGG | 0.686776 | 1.4:+4568951 | None:intergenic |
| TGAAGAGATTAAGCCACCTG+AGG | 0.697941 | 1.4:-4570569 | MS.gene00474:CDS |
| ACATAAGTTTCACATAACTG+AGG | 0.720028 | 1.4:+4571289 | None:intergenic |
| AAAAGAAAGAGATATCTCCG+GGG | 0.745816 | 1.4:+4568950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGATTTTTTATTTGTTT+TGG | - | chr1.4:4569848-4569867 | MS.gene00474:intron | 10.0% |
| !! | TATTCTTAAAAAAGTTAGTA+AGG | + | chr1.4:4570663-4570682 | None:intergenic | 15.0% |
| !! | TTAACTTCAAATTTCAATTA+GGG | - | chr1.4:4569239-4569258 | MS.gene00474:CDS | 15.0% |
| !!! | TTTAACTTCAAATTTCAATT+AGG | - | chr1.4:4569238-4569257 | MS.gene00474:CDS | 15.0% |
| !!! | TTTCTTTTTTTGAATTTAGA+GGG | - | chr1.4:4571517-4571536 | MS.gene00474:CDS | 15.0% |
| !!! | TTTTGTTTTTGTTTGTTTTT+AGG | - | chr1.4:4569313-4569332 | MS.gene00474:intron | 15.0% |
| !! | ATTATATACAGAAAGTTCAA+AGG | - | chr1.4:4569363-4569382 | MS.gene00474:intron | 20.0% |
| !! | CACATTTGACAAAAAATTTA+GGG | + | chr1.4:4570723-4570742 | None:intergenic | 20.0% |
| !! | TAAACAATAAAATCACATCT+TGG | + | chr1.4:4569813-4569832 | None:intergenic | 20.0% |
| !! | TGATGAATAAATACCTAATT+TGG | - | chr1.4:4569611-4569630 | MS.gene00474:intron | 20.0% |
| !! | TTATATACAGAAAGTTCAAA+GGG | - | chr1.4:4569364-4569383 | MS.gene00474:intron | 20.0% |
| !!! | AAATAGTATCATCTAAGATA+GGG | - | chr1.4:4570432-4570451 | MS.gene00474:intron | 20.0% |
| !!! | AGTTTGAAATCAATTTTACT+TGG | - | chr1.4:4570824-4570843 | MS.gene00474:intron | 20.0% |
| !!! | CTTTCTTTTTTTGAATTTAG+AGG | - | chr1.4:4571516-4571535 | MS.gene00474:CDS | 20.0% |
| !!! | TAAAATTGATTTCAAACTTC+TGG | + | chr1.4:4570822-4570841 | None:intergenic | 20.0% |
| !!! | TTAAGTTTGTTTGGTAAAAA+AGG | + | chr1.4:4571347-4571366 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTGAATTTAGAG+GGG | - | chr1.4:4571518-4571537 | MS.gene00474:CDS | 20.0% |
| !!! | TTGGTATTTTGTTTGATTAA+AGG | - | chr1.4:4570037-4570056 | MS.gene00474:intron | 20.0% |
| ! | AAAAAAGAAAGAGATATCTC+CGG | + | chr1.4:4571507-4571526 | None:intergenic | 25.0% |
| ! | AAATAGAAAGAGAATTAGAG+TGG | - | chr1.4:4570488-4570507 | MS.gene00474:intron | 25.0% |
| ! | AAATGGGTCAAAATTAATAG+AGG | + | chr1.4:4569718-4569737 | None:intergenic | 25.0% |
| ! | AAGAGTAATCTCTGTTAAAA+TGG | + | chr1.4:4569735-4569754 | None:intergenic | 25.0% |
| ! | AAGTCATTGAAGTTTGAATT+GGG | - | chr1.4:4570086-4570105 | MS.gene00474:intron | 25.0% |
| ! | AATAGAAAGAGAATTAGAGT+GGG | - | chr1.4:4570489-4570508 | MS.gene00474:intron | 25.0% |
| ! | AATTAAAATAACACTCGCAT+TGG | - | chr1.4:4569658-4569677 | MS.gene00474:intron | 25.0% |
| ! | ACTCAATTGTTTAAAAAGCT+TGG | + | chr1.4:4571386-4571405 | None:intergenic | 25.0% |
| ! | AGAGTAATCTCTGTTAAAAT+GGG | + | chr1.4:4569734-4569753 | None:intergenic | 25.0% |
| ! | AGATAAATACAAACAGCATA+AGG | - | chr1.4:4571294-4571313 | MS.gene00474:CDS | 25.0% |
| ! | ATGTTTCTTTGTATGTTGAA+TGG | - | chr1.4:4570156-4570175 | MS.gene00474:intron | 25.0% |
| ! | ATTACTCTTATGAAAATGTC+AGG | - | chr1.4:4569746-4569765 | MS.gene00474:intron | 25.0% |
| ! | ATTCGTGTACAATCTATATT+TGG | - | chr1.4:4571112-4571131 | MS.gene00474:CDS | 25.0% |
| ! | CCACATTTGACAAAAAATTT+AGG | + | chr1.4:4570724-4570743 | None:intergenic | 25.0% |
| ! | CTCAATTGTTTAAAAAGCTT+GGG | + | chr1.4:4571385-4571404 | None:intergenic | 25.0% |
| ! | TTCTGTATATAATCACACAA+TGG | + | chr1.4:4569356-4569375 | None:intergenic | 25.0% |
| ! | TTTATTACTCAAAATGTTGC+AGG | - | chr1.4:4570854-4570873 | MS.gene00474:intron | 25.0% |
| ! | TTTCGGTTTCTTATATTGAT+CGG | - | chr1.4:4569474-4569493 | MS.gene00474:CDS | 25.0% |
| !! | CAAATAGTATCATCTAAGAT+AGG | - | chr1.4:4570431-4570450 | MS.gene00474:intron | 25.0% |
| !! | TAGGACAAATTAAGTTTGTT+TGG | + | chr1.4:4571356-4571375 | None:intergenic | 25.0% |
| !! | TCAAATTTCAATTAGGGTTT+TGG | - | chr1.4:4569245-4569264 | MS.gene00474:CDS | 25.0% |
| !!! | ATGCGAGTGTTATTTTAATT+TGG | + | chr1.4:4569658-4569677 | None:intergenic | 25.0% |
| !!! | CCTAAATTTTTTGTCAAATG+TGG | - | chr1.4:4570721-4570740 | MS.gene00474:intron | 25.0% |
| !!! | TGCGAGTGTTATTTTAATTT+GGG | + | chr1.4:4569657-4569676 | None:intergenic | 25.0% |
| !!! | TTTCACAAAGAAAGTATCTT+TGG | - | chr1.4:4570764-4570783 | MS.gene00474:intron | 25.0% |
| AAAAAGAAAGAGATATCTCC+GGG | + | chr1.4:4571506-4571525 | None:intergenic | 30.0% | |
| AAAAAGTTAGTAAGGTTGCA+TGG | + | chr1.4:4570655-4570674 | None:intergenic | 30.0% | |
| AAAAGTTAGTAAGGTTGCAT+GGG | + | chr1.4:4570654-4570673 | None:intergenic | 30.0% | |
| AACCGAAAAATAAAGCGTAT+CGG | + | chr1.4:4569462-4569481 | None:intergenic | 30.0% | |
| AACCTATAACTACTATGAGA+TGG | + | chr1.4:4570293-4570312 | None:intergenic | 30.0% | |
| AATTTGGGTGCAAACAAATT+GGG | + | chr1.4:4569642-4569661 | None:intergenic | 30.0% | |
| ACATAAGTTTCACATAACTG+AGG | + | chr1.4:4569166-4569185 | None:intergenic | 30.0% | |
| ACCTATAACTACTATGAGAT+GGG | + | chr1.4:4570292-4570311 | None:intergenic | 30.0% | |
| ACGAATTAAAACATTACCCA+AGG | + | chr1.4:4571098-4571117 | None:intergenic | 30.0% | |
| AGAAGATTCATCACTAAAGT+TGG | - | chr1.4:4570229-4570248 | MS.gene00474:intron | 30.0% | |
| AGACAGAAGTTACAATTACT+CGG | - | chr1.4:4569521-4569540 | MS.gene00474:intron | 30.0% | |
| AGATACTTTCTTTGTGAAAG+TGG | + | chr1.4:4570763-4570782 | None:intergenic | 30.0% | |
| AGTAGTTATAGGTTATGACA+TGG | - | chr1.4:4570299-4570318 | MS.gene00474:intron | 30.0% | |
| ATATCTGGTGAATTCATAGA+TGG | + | chr1.4:4571191-4571210 | None:intergenic | 30.0% | |
| CAGGAATTAATCTGGTATAT+TGG | - | chr1.4:4569765-4569784 | MS.gene00474:intron | 30.0% | |
| CTACAATAAAGACATTCCTA+AGG | - | chr1.4:4570114-4570133 | MS.gene00474:intron | 30.0% | |
| CTTAGGAATGTCTTTATTGT+AGG | + | chr1.4:4570116-4570135 | None:intergenic | 30.0% | |
| GAAAATGTCAGGAATTAATC+TGG | - | chr1.4:4569757-4569776 | MS.gene00474:intron | 30.0% | |
| GAAGTCATTGAAGTTTGAAT+TGG | - | chr1.4:4570085-4570104 | MS.gene00474:intron | 30.0% | |
| TAATTTGGGTGCAAACAAAT+TGG | + | chr1.4:4569643-4569662 | None:intergenic | 30.0% | |
| TATAGGTTATGACATGGATT+CGG | - | chr1.4:4570305-4570324 | MS.gene00474:intron | 30.0% | |
| TATTGAATGAACTATCCAGA+AGG | + | chr1.4:4570583-4570602 | None:intergenic | 30.0% | |
| TGGACTATAAACAAATTGTG+AGG | - | chr1.4:4569785-4569804 | MS.gene00474:intron | 30.0% | |
| TTACGATTATCTTCGTAACA+TGG | - | chr1.4:4569195-4569214 | MS.gene00474:CDS | 30.0% | |
| TTTGTTGCATTCTATAATGG+TGG | - | chr1.4:4569681-4569700 | MS.gene00474:intron | 30.0% | |
| ! | AATATACATGACTTGTACCT+TGG | - | chr1.4:4571241-4571260 | MS.gene00474:intron | 30.0% |
| ! | ATAGTTGAACTTTGAGCTTT+TGG | - | chr1.4:4570534-4570553 | MS.gene00474:CDS | 30.0% |
| ! | ATGTTCAACTTTTAGTAGTG+TGG | - | chr1.4:4570343-4570362 | MS.gene00474:CDS | 30.0% |
| ! | GATTTTGGATGGTATTGTTT+TGG | - | chr1.4:4570018-4570037 | MS.gene00474:intron | 30.0% |
| ! | TACTTTTATCTCTTTTGTGC+AGG | - | chr1.4:4570929-4570948 | MS.gene00474:CDS | 30.0% |
| ! | TAGTTGAACTTTGAGCTTTT+GGG | - | chr1.4:4570535-4570554 | MS.gene00474:CDS | 30.0% |
| ! | TGAGGACTTTTGTTACATTA+CGG | - | chr1.4:4569907-4569926 | MS.gene00474:intron | 30.0% |
| ! | TGTGTTGTTGAATGTTTGTT+TGG | - | chr1.4:4569981-4570000 | MS.gene00474:intron | 30.0% |
| ! | TGTTCAACTTTTAGTAGTGT+GGG | - | chr1.4:4570344-4570363 | MS.gene00474:CDS | 30.0% |
| !! | AAACTTAATTTGTCCTACCT+TGG | - | chr1.4:4571359-4571378 | MS.gene00474:CDS | 30.0% |
| !! | GTTGAATGTTTGTTTGGTTT+TGG | - | chr1.4:4569987-4570006 | MS.gene00474:intron | 30.0% |
| !! | TGGTTTGTTGCATTCTATAA+TGG | - | chr1.4:4569678-4569697 | MS.gene00474:intron | 30.0% |
| !! | TTGATTAAAGGTTTTGACCA+TGG | - | chr1.4:4570049-4570068 | MS.gene00474:intron | 30.0% |
| !! | TTTAGGTTGATTCTAGTAAG+AGG | - | chr1.4:4569330-4569349 | MS.gene00474:intron | 30.0% |
| !!! | GTTTTGGTTTTCCCTAATTT+GGG | - | chr1.4:4569261-4569280 | MS.gene00474:CDS | 30.0% |
| !!! | TTCCGATACGCTTTATTTTT+CGG | - | chr1.4:4569457-4569476 | MS.gene00474:CDS | 30.0% |
| !!! | TTTTGGTTTTCCCTAATTTG+GGG | - | chr1.4:4569262-4569281 | MS.gene00474:CDS | 30.0% |
| AAAAGAAAGAGATATCTCCG+GGG | + | chr1.4:4571505-4571524 | None:intergenic | 35.0% | |
| AAGCAAAAAGCCCCAAATTA+GGG | + | chr1.4:4569275-4569294 | None:intergenic | 35.0% | |
| ACCCATCTCATAGTAGTTAT+AGG | - | chr1.4:4570288-4570307 | MS.gene00474:intron | 35.0% | |
| ACTGTGACCAAAACAACAAA+TGG | + | chr1.4:4571455-4571474 | None:intergenic | 35.0% | |
| ATATAAACCTGCAGACTTGA+AGG | - | chr1.4:4571207-4571226 | MS.gene00474:intron | 35.0% | |
| CAATAAAACACACATGCCTT+AGG | + | chr1.4:4570133-4570152 | None:intergenic | 35.0% | |
| GGCTGAATTCTGTAATCAAA+TGG | + | chr1.4:4571170-4571189 | None:intergenic | 35.0% | |
| TAAGCAAAAAGCCCCAAATT+AGG | + | chr1.4:4569276-4569295 | None:intergenic | 35.0% | |
| TCATTGAAGTTTGAATTGGG+TGG | - | chr1.4:4570089-4570108 | MS.gene00474:intron | 35.0% | |
| TCGAATTTCTCCAATTTCTC+CGG | + | chr1.4:4569139-4569158 | None:intergenic | 35.0% | |
| ! | ATCACTAAAGTTGGTCTAGA+GGG | - | chr1.4:4570238-4570257 | MS.gene00474:intron | 35.0% |
| ! | GGGGCTTTTTGCTTAATTTA+GGG | - | chr1.4:4569281-4569300 | MS.gene00474:intron | 35.0% |
| ! | GTTAGTCTGCAGAACAAAAT+AGG | + | chr1.4:4570627-4570646 | None:intergenic | 35.0% |
| ! | TGGGGCTTTTTGCTTAATTT+AGG | - | chr1.4:4569280-4569299 | MS.gene00474:intron | 35.0% |
| ! | TTTTAGTAGTGTGGGACTTT+TGG | - | chr1.4:4570352-4570371 | MS.gene00474:CDS | 35.0% |
| ! | TTTTCTTTGCTTCACGTTGA+GGG | + | chr1.4:4568958-4568977 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGCTTCACGTTG+AGG | + | chr1.4:4568959-4568978 | None:intergenic | 35.0% |
| !! | ATTAAAGGTTTTGACCATGG+AGG | - | chr1.4:4570052-4570071 | MS.gene00474:intron | 35.0% |
| !! | GTATCTTTGGTTTGTGCTAT+AGG | - | chr1.4:4570777-4570796 | MS.gene00474:intron | 35.0% |
| !!! | GCTGATTCCATTTGTTGTTT+TGG | - | chr1.4:4571445-4571464 | MS.gene00474:CDS | 35.0% |
| !!! | GGTTTTGGTTTTCCCTAATT+TGG | - | chr1.4:4569260-4569279 | MS.gene00474:CDS | 35.0% |
| !!! | GTTTTGGATCTTGCTGATTT+TGG | - | chr1.4:4570003-4570022 | MS.gene00474:intron | 35.0% |
| AAACGAAAACGTGTTCCTCT+CGG | - | chr1.4:4569010-4569029 | MS.gene00474:intron | 40.0% | |
| AAAGAAAGAGATATCTCCGG+GGG | + | chr1.4:4571504-4571523 | None:intergenic | 40.0% | |
| AAAGTGGCTACTAGCTAGAT+TGG | + | chr1.4:4570747-4570766 | None:intergenic | 40.0% | |
| AAATTGGGAGGGACCAAATT+AGG | + | chr1.4:4569627-4569646 | None:intergenic | 40.0% | |
| ATCAAACTCCGATGAAACTC+CGG | - | chr1.4:4569111-4569130 | MS.gene00474:intron | 40.0% | |
| ATTACCCAAGGATGAGTCTT+CGG | + | chr1.4:4571086-4571105 | None:intergenic | 40.0% | |
| CAAACCAAAGTCTCCAGATT+TGG | + | chr1.4:4570904-4570923 | None:intergenic | 40.0% | |
| CAAGTCTGCAGGTTTATATC+TGG | + | chr1.4:4571206-4571225 | None:intergenic | 40.0% | |
| CAATACATACTCCAAGGAAG+AGG | - | chr1.4:4569931-4569950 | MS.gene00474:intron | 40.0% | |
| CCAGATTTGGCACACATAAA+CGG | + | chr1.4:4570891-4570910 | None:intergenic | 40.0% | |
| CGATTATCTTCGTAACATGG+AGG | - | chr1.4:4569198-4569217 | MS.gene00474:CDS | 40.0% | |
| CTTCAAAATATCAGCCTCCA+TGG | + | chr1.4:4570069-4570088 | None:intergenic | 40.0% | |
| TAACAAAAGTCCTCAACCTC+AGG | + | chr1.4:4569902-4569921 | None:intergenic | 40.0% | |
| TACAAGATTCACCTCTTCCT+TGG | + | chr1.4:4569945-4569964 | None:intergenic | 40.0% | |
| TACGGACAATACATACTCCA+AGG | - | chr1.4:4569925-4569944 | MS.gene00474:intron | 40.0% | |
| TGGCACACATAAACGGAAAT+GGG | + | chr1.4:4570884-4570903 | None:intergenic | 40.0% | |
| TGTGAAGTTCTTGCCTTCTA+TGG | - | chr1.4:4571019-4571038 | MS.gene00474:CDS | 40.0% | |
| TGTTTAAAAAGCTTGGGCCA+AGG | + | chr1.4:4571379-4571398 | None:intergenic | 40.0% | |
| TTGGCACACATAAACGGAAA+TGG | + | chr1.4:4570885-4570904 | None:intergenic | 40.0% | |
| TTGTTCACATAGTGCAGCTA+CGG | + | chr1.4:4568984-4569003 | None:intergenic | 40.0% | |
| ! | CATCACTAAAGTTGGTCTAG+AGG | - | chr1.4:4570237-4570256 | MS.gene00474:intron | 40.0% |
| ! | TACATGACTTGTACCTTGGT+AGG | - | chr1.4:4571245-4571264 | MS.gene00474:intron | 40.0% |
| ! | TTGAACTTTGAGCTTTTGGG+AGG | - | chr1.4:4570538-4570557 | MS.gene00474:CDS | 40.0% |
| !! | GTGGGTTTTGTCATGTCATT+TGG | - | chr1.4:4570507-4570526 | MS.gene00474:intron | 40.0% |
| !! | TCGTTTGTTATTTCACCGAG+AGG | + | chr1.4:4569028-4569047 | None:intergenic | 40.0% |
| !! | TGAACTTTGAGCTTTTGGGA+GGG | - | chr1.4:4570539-4570558 | MS.gene00474:CDS | 40.0% |
| !!! | ACGTTTCGTTTTTTCTGCGT+TGG | + | chr1.4:4569082-4569101 | None:intergenic | 40.0% |
| !!! | TGGATCTTGCTGATTTTGGA+TGG | - | chr1.4:4570007-4570026 | MS.gene00474:intron | 40.0% |
| ACACATTCCTTCAAGTCTGC+AGG | + | chr1.4:4571217-4571236 | None:intergenic | 45.0% | |
| AGGATTGACAATAAGCGTGC+AGG | + | chr1.4:4571327-4571346 | None:intergenic | 45.0% | |
| CCGTTTATGTGTGCCAAATC+TGG | - | chr1.4:4570888-4570907 | MS.gene00474:intron | 45.0% | |
| GAAGTTCTTGCCTTCTATGG+TGG | - | chr1.4:4571022-4571041 | MS.gene00474:CDS | 45.0% | |
| GACTTGTACCTTGGTAGGAA+AGG | - | chr1.4:4571250-4571269 | MS.gene00474:intron | 45.0% | |
| GAGATGGGAATTGAACCTTC+TGG | - | chr1.4:4570565-4570584 | MS.gene00474:CDS | 45.0% | |
| GATGTTAACGCGAGTATGAG+GGG | - | chr1.4:4569386-4569405 | MS.gene00474:CDS | 45.0% | |
| GGATGTTAACGCGAGTATGA+GGG | - | chr1.4:4569385-4569404 | MS.gene00474:CDS | 45.0% | |
| TAAAAAGCTTGGGCCAAGGT+AGG | + | chr1.4:4571375-4571394 | None:intergenic | 45.0% | |
| TGAAGAGATTAAGCCACCTG+AGG | - | chr1.4:4569883-4569902 | MS.gene00474:intron | 45.0% | |
| TGGGTGCAAACAAATTGGGA+GGG | + | chr1.4:4569638-4569657 | None:intergenic | 45.0% | |
| TGTGCCAAATCTGGAGACTT+TGG | - | chr1.4:4570897-4570916 | MS.gene00474:intron | 45.0% | |
| TTACCCAAGGATGAGTCTTC+GGG | + | chr1.4:4571085-4571104 | None:intergenic | 45.0% | |
| TTCTCCAATTTCTCCGGTAC+CGG | + | chr1.4:4569133-4569152 | None:intergenic | 45.0% | |
| TTGGGTGCAAACAAATTGGG+AGG | + | chr1.4:4569639-4569658 | None:intergenic | 45.0% | |
| TTGGTCACAGTTCAAATGCG+TGG | - | chr1.4:4571464-4571483 | MS.gene00474:CDS | 45.0% | |
| TTGTACCTTGGTAGGAAAGG+CGG | - | chr1.4:4571253-4571272 | MS.gene00474:intron | 45.0% | |
| AAGCCCGAAGACTCATCCTT+GGG | - | chr1.4:4571079-4571098 | MS.gene00474:CDS | 50.0% | |
| ACTGATGCAGCCACCATAGA+AGG | + | chr1.4:4571035-4571054 | None:intergenic | 50.0% | |
| CAAAAGTCCTCAACCTCAGG+TGG | + | chr1.4:4569899-4569918 | None:intergenic | 50.0% | |
| CCAACAAACTGAGCTCAGCA+AGG | + | chr1.4:4570989-4571008 | None:intergenic | 50.0% | |
| CCTTGCTGAGCTCAGTTTGT+TGG | - | chr1.4:4570986-4571005 | MS.gene00474:CDS | 50.0% | |
| GAATACCTCTGCTGCATCTC+TGG | - | chr1.4:4570678-4570697 | MS.gene00474:intron | 50.0% | |
| GATTAAGCCACCTGAGGTTG+AGG | - | chr1.4:4569889-4569908 | MS.gene00474:intron | 50.0% | |
| GCTCAGCAAGGTAAGAGCAA+AGG | + | chr1.4:4570977-4570996 | None:intergenic | 50.0% | |
| GGGATGTTAACGCGAGTATG+AGG | - | chr1.4:4569384-4569403 | MS.gene00474:CDS | 50.0% | |
| TAAGCCCGAAGACTCATCCT+TGG | - | chr1.4:4571078-4571097 | MS.gene00474:CDS | 50.0% | |
| TCTTTGCTTCACGTTGAGGG+CGG | + | chr1.4:4568955-4568974 | None:intergenic | 50.0% | |
| ! | AACTCCGGTACCGGAGAAAT+TGG | - | chr1.4:4569126-4569145 | MS.gene00474:intron | 50.0% |
| !! | ACTCGGTGTTGCTTCGATGT+TGG | - | chr1.4:4569538-4569557 | MS.gene00474:intron | 50.0% |
| !! | CTTTTGGGAGGGTCTGAGAT+GGG | - | chr1.4:4570550-4570569 | MS.gene00474:CDS | 50.0% |
| !! | GAGTATGAGGGGTGTTCTTG+TGG | - | chr1.4:4569397-4569416 | MS.gene00474:CDS | 50.0% |
| !! | GGGTGTTCTTGTGGATTGGT+TGG | - | chr1.4:4569406-4569425 | MS.gene00474:CDS | 50.0% |
| !! | TGAGGGGTGTTCTTGTGGAT+TGG | - | chr1.4:4569402-4569421 | MS.gene00474:CDS | 50.0% |
| AAGAGATATCTCCGGGGGAG+AGG | + | chr1.4:4571499-4571518 | None:intergenic | 55.0% | |
| AAGAGCCGCCTTTCCTACCA+AGG | + | chr1.4:4571261-4571280 | None:intergenic | 55.0% | |
| AGAGATATCTCCGGGGGAGA+GGG | + | chr1.4:4571498-4571517 | None:intergenic | 55.0% | |
| CTCCGATGAAACTCCGGTAC+CGG | - | chr1.4:4569117-4569136 | MS.gene00474:intron | 55.0% | |
| TACCTCTGCTGCATCTCTGG+TGG | - | chr1.4:4570681-4570700 | MS.gene00474:intron | 55.0% | |
| ! | CTCCGGTACCGGAGTTTCAT+CGG | + | chr1.4:4569122-4569141 | None:intergenic | 55.0% |
| !! | GCTTTTGGGAGGGTCTGAGA+TGG | - | chr1.4:4570549-4570568 | MS.gene00474:CDS | 55.0% |
| CGCGTGGGGTTAACGCTCTT+TGG | + | chr1.4:4568932-4568951 | None:intergenic | 60.0% | |
| TGCCACCAGAGATGCAGCAG+AGG | + | chr1.4:4570686-4570705 | None:intergenic | 60.0% | |
| GGCAACAACACCCTCTCCCC+CGG | - | chr1.4:4571485-4571504 | MS.gene00474:CDS | 65.0% | |
| TCACGTTGAGGGCGGCGCGT+GGG | + | chr1.4:4568947-4568966 | None:intergenic | 70.0% | |
| TTCACGTTGAGGGCGGCGCG+TGG | + | chr1.4:4568948-4568967 | None:intergenic | 70.0% | |
| CACGTTGAGGGCGGCGCGTG+GGG | + | chr1.4:4568946-4568965 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 4568923 | 4571551 | 4568923 | ID=MS.gene00474 |
| chr1.4 | mRNA | 4568923 | 4571551 | 4568923 | ID=MS.gene00474.t1;Parent=MS.gene00474 |
| chr1.4 | exon | 4571255 | 4571551 | 4571255 | ID=MS.gene00474.t1.exon1;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4571255 | 4571551 | 4571255 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4570907 | 4571139 | 4570907 | ID=MS.gene00474.t1.exon2;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4570907 | 4571139 | 4570907 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4570522 | 4570597 | 4570522 | ID=MS.gene00474.t1.exon3;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4570522 | 4570597 | 4570522 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4570339 | 4570415 | 4570339 | ID=MS.gene00474.t1.exon4;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4570339 | 4570415 | 4570339 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4570207 | 4570243 | 4570207 | ID=MS.gene00474.t1.exon5;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4570207 | 4570243 | 4570207 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4569374 | 4569523 | 4569374 | ID=MS.gene00474.t1.exon6;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4569374 | 4569523 | 4569374 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4569159 | 4569293 | 4569159 | ID=MS.gene00474.t1.exon7;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4569159 | 4569293 | 4569159 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| chr1.4 | exon | 4568923 | 4569000 | 4568923 | ID=MS.gene00474.t1.exon8;Parent=MS.gene00474.t1 |
| chr1.4 | CDS | 4568923 | 4569000 | 4568923 | ID=cds.MS.gene00474.t1;Parent=MS.gene00474.t1 |
| Gene Sequence |
| Protein sequence |