Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55782.t1 | XP_013447173.1 | 91 | 477 | 40 | 2 | 1 | 475 | 1 | 476 | 4.40E-143 | 518.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55782.t1 | Q9SUP7 | 52.9 | 480 | 185 | 7 | 1 | 467 | 1 | 452 | 1.3e-66 | 255.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55782.t1 | A0A072U5S8 | 91.0 | 477 | 40 | 2 | 1 | 475 | 1 | 476 | 3.2e-143 | 518.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene55782.t1 | TR | HMG |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049397 | MS.gene55782 | 0.846486 | 2.11E-59 | -1.69E-46 |
| MS.gene049418 | MS.gene55782 | 0.842503 | 2.48E-58 | -1.69E-46 |
| MS.gene049596 | MS.gene55782 | 0.81314 | 2.98E-51 | -1.69E-46 |
| MS.gene049622 | MS.gene55782 | 0.822829 | 1.92E-53 | -1.69E-46 |
| MS.gene049660 | MS.gene55782 | 0.808588 | 2.88E-50 | -1.69E-46 |
| MS.gene04985 | MS.gene55782 | 0.836539 | 8.82E-57 | -1.69E-46 |
| MS.gene049989 | MS.gene55782 | 0.916365 | 1.94E-85 | -1.69E-46 |
| MS.gene050297 | MS.gene55782 | 0.91658 | 1.50E-85 | -1.69E-46 |
| MS.gene050310 | MS.gene55782 | 0.870855 | 1.06E-66 | -1.69E-46 |
| MS.gene05054 | MS.gene55782 | 0.814997 | 1.16E-51 | -1.69E-46 |
| MS.gene050648 | MS.gene55782 | 0.857428 | 1.64E-62 | -1.69E-46 |
| MS.gene051067 | MS.gene55782 | 0.811975 | 5.35E-51 | -1.69E-46 |
| MS.gene051094 | MS.gene55782 | 0.859935 | 2.93E-63 | -1.69E-46 |
| MS.gene05124 | MS.gene55782 | 0.819853 | 9.34E-53 | -1.69E-46 |
| MS.gene051263 | MS.gene55782 | 0.834367 | 3.12E-56 | -1.69E-46 |
| MS.gene051478 | MS.gene55782 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene051629 | MS.gene55782 | 0.840309 | 9.40E-58 | -1.69E-46 |
| MS.gene051742 | MS.gene55782 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene051955 | MS.gene55782 | 0.840623 | 7.78E-58 | -1.69E-46 |
| MS.gene052143 | MS.gene55782 | 0.84811 | 7.55E-60 | -1.69E-46 |
| MS.gene052367 | MS.gene55782 | 0.875162 | 3.83E-68 | -1.69E-46 |
| MS.gene053173 | MS.gene55782 | 0.806617 | 7.54E-50 | -1.69E-46 |
| MS.gene053348 | MS.gene55782 | 0.800099 | 1.69E-48 | -1.69E-46 |
| MS.gene053416 | MS.gene55782 | 0.879589 | 1.10E-69 | -1.69E-46 |
| MS.gene053417 | MS.gene55782 | 0.88049 | 5.26E-70 | -1.69E-46 |
| MS.gene05369 | MS.gene55782 | 0.821192 | 4.60E-53 | -1.69E-46 |
| MS.gene053929 | MS.gene55782 | 0.818625 | 1.78E-52 | -1.69E-46 |
| MS.gene054551 | MS.gene55782 | 0.805834 | 1.10E-49 | -1.69E-46 |
| MS.gene054643 | MS.gene55782 | 0.854741 | 1.01E-61 | -1.69E-46 |
| MS.gene055308 | MS.gene55782 | 0.800245 | 1.58E-48 | -1.69E-46 |
| MS.gene055411 | MS.gene55782 | 0.852289 | 5.09E-61 | -1.69E-46 |
| MS.gene055578 | MS.gene55782 | 0.815787 | 7.73E-52 | -1.69E-46 |
| MS.gene055764 | MS.gene55782 | 0.811374 | 7.23E-51 | -1.69E-46 |
| MS.gene055777 | MS.gene55782 | 0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene055781 | MS.gene55782 | 0.832286 | 1.03E-55 | -1.69E-46 |
| MS.gene055957 | MS.gene55782 | 0.859874 | 3.06E-63 | -1.69E-46 |
| MS.gene056041 | MS.gene55782 | 0.883708 | 3.57E-71 | -1.69E-46 |
| MS.gene056042 | MS.gene55782 | 0.857459 | 1.61E-62 | -1.69E-46 |
| MS.gene056169 | MS.gene55782 | 0.830746 | 2.47E-55 | -1.69E-46 |
| MS.gene056228 | MS.gene55782 | 0.821967 | 3.05E-53 | -1.69E-46 |
| MS.gene056335 | MS.gene55782 | 0.80803 | 3.78E-50 | -1.69E-46 |
| MS.gene056526 | MS.gene55782 | 0.875429 | 3.10E-68 | -1.69E-46 |
| MS.gene057004 | MS.gene55782 | 0.846208 | 2.51E-59 | -1.69E-46 |
| MS.gene057458 | MS.gene55782 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene057483 | MS.gene55782 | 0.844005 | 9.88E-59 | -1.69E-46 |
| MS.gene058196 | MS.gene55782 | 0.882355 | 1.12E-70 | -1.69E-46 |
| MS.gene058197 | MS.gene55782 | 0.908499 | 1.60E-81 | -1.69E-46 |
| MS.gene058198 | MS.gene55782 | 0.907633 | 4.10E-81 | -1.69E-46 |
| MS.gene058818 | MS.gene55782 | 0.832558 | 8.83E-56 | -1.69E-46 |
| MS.gene058844 | MS.gene55782 | 0.810718 | 1.00E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene55782 | 0.920194 | 1.74E-87 | -1.69E-46 |
| MS.gene059553 | MS.gene55782 | 0.817059 | 4.01E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene55782 | 0.881819 | 1.75E-70 | -1.69E-46 |
| MS.gene060492 | MS.gene55782 | 0.818257 | 2.15E-52 | -1.69E-46 |
| MS.gene060565 | MS.gene55782 | 0.885223 | 9.78E-72 | -1.69E-46 |
| MS.gene06057 | MS.gene55782 | 0.986701 | 1.13E-167 | -1.69E-46 |
| MS.gene061099 | MS.gene55782 | 0.840186 | 1.01E-57 | -1.69E-46 |
| MS.gene061260 | MS.gene55782 | 0.874667 | 5.65E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24383 | MS.gene55782 | PPI |
| MS.gene87743 | MS.gene55782 | PPI |
| MS.gene87064 | MS.gene55782 | PPI |
| MS.gene99872 | MS.gene55782 | PPI |
| MS.gene062778 | MS.gene55782 | PPI |
| MS.gene043595 | MS.gene55782 | PPI |
| MS.gene55782 | MS.gene42075 | PPI |
| MS.gene55782 | MS.gene82237 | PPI |
| MS.gene55782 | MS.gene48819 | PPI |
| MS.gene043593 | MS.gene55782 | PPI |
| MS.gene021870 | MS.gene55782 | PPI |
| MS.gene55782 | MS.gene044021 | PPI |
| MS.gene043645 | MS.gene55782 | PPI |
| MS.gene47008 | MS.gene55782 | PPI |
| MS.gene76728 | MS.gene55782 | PPI |
| MS.gene064353 | MS.gene55782 | PPI |
| MS.gene035825 | MS.gene55782 | PPI |
| MS.gene016938 | MS.gene55782 | PPI |
| MS.gene37574 | MS.gene55782 | PPI |
| MS.gene77045 | MS.gene55782 | PPI |
| MS.gene55782 | MS.gene67108 | PPI |
| MS.gene001968 | MS.gene55782 | PPI |
| MS.gene73093 | MS.gene55782 | PPI |
| MS.gene043643 | MS.gene55782 | PPI |
| MS.gene035826 | MS.gene55782 | PPI |
| MS.gene064351 | MS.gene55782 | PPI |
| MS.gene035828 | MS.gene55782 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55782.t1 | MTR_8g099305 | 97.065 | 477 | 11 | 2 | 1 | 475 | 1 | 476 | 0.0 | 905 |
| MS.gene55782.t1 | MTR_6g044445 | 89.474 | 38 | 4 | 0 | 329 | 366 | 65 | 102 | 7.96e-13 | 65.1 |
| MS.gene55782.t1 | MTR_8g073345 | 47.126 | 87 | 40 | 2 | 257 | 337 | 29 | 115 | 1.42e-12 | 65.1 |
| MS.gene55782.t1 | MTR_8g073345 | 47.126 | 87 | 40 | 2 | 257 | 337 | 29 | 115 | 1.44e-12 | 65.5 |
| MS.gene55782.t1 | MTR_3g115580 | 41.111 | 90 | 50 | 1 | 255 | 341 | 35 | 124 | 4.43e-12 | 64.3 |
| MS.gene55782.t1 | MTR_7g068280 | 45.205 | 73 | 37 | 1 | 261 | 330 | 47 | 119 | 8.05e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55782.t1 | AT4G11080 | 57.609 | 460 | 162 | 7 | 10 | 464 | 11 | 442 | 3.21e-163 | 469 |
| MS.gene55782.t1 | AT4G23800 | 57.083 | 480 | 159 | 9 | 1 | 467 | 1 | 446 | 7.42e-161 | 463 |
| MS.gene55782.t1 | AT4G23800 | 56.875 | 480 | 166 | 8 | 1 | 467 | 1 | 452 | 5.56e-160 | 461 |
| MS.gene55782.t1 | AT3G51880 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 7.82e-12 | 63.9 |
| MS.gene55782.t1 | AT3G51880 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.11e-11 | 63.9 |
| MS.gene55782.t1 | AT3G51880 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.11e-11 | 63.9 |
| MS.gene55782.t1 | AT3G51880 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.11e-11 | 63.9 |
| MS.gene55782.t1 | AT3G51880 | 42.857 | 84 | 44 | 2 | 251 | 330 | 38 | 121 | 1.29e-11 | 63.9 |
| MS.gene55782.t1 | AT4G35570 | 38.824 | 85 | 49 | 2 | 251 | 332 | 20 | 104 | 4.70e-11 | 60.8 |
| MS.gene55782.t1 | AT4G35570 | 38.824 | 85 | 49 | 2 | 251 | 332 | 20 | 104 | 4.70e-11 | 60.8 |
| MS.gene55782.t1 | AT1G20696 | 35.294 | 119 | 72 | 2 | 260 | 375 | 30 | 146 | 9.19e-11 | 60.5 |
Find 102 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGACATTTCAAACATTT+TGG | 0.072036 | 4.3:-4796054 | MS.gene55782:CDS |
| CTTCATGTTTCTGAAGTTTC+AGG | 0.139396 | 4.3:+4795052 | None:intergenic |
| TTGCTTCAAGATCTCATCTT+TGG | 0.243800 | 4.3:+4796607 | None:intergenic |
| AAATCCAGAGGCAGAATTTA+AGG | 0.251785 | 4.3:-4796072 | MS.gene55782:CDS |
| CTTGCAATTGCTCAAGAAAA+AGG | 0.274473 | 4.3:-4795028 | MS.gene55782:CDS |
| CTTCTTCGGCATACATGTTA+TGG | 0.283880 | 4.3:-4796247 | MS.gene55782:CDS |
| GTTTGTAAGCCTCCATTTCT+TGG | 0.287307 | 4.3:+4795124 | None:intergenic |
| CTTCCTCTTGATTTCTTTGT+CGG | 0.303855 | 4.3:+4796863 | None:intergenic |
| CCACTCTTCAGATGTGATCT+TGG | 0.324738 | 4.3:+4795302 | None:intergenic |
| TGCTCGAAAGATCGTTCCTT+TGG | 0.352886 | 4.3:+4796704 | None:intergenic |
| GCTTGGTATTTCTCCTCATA+AGG | 0.353624 | 4.3:+4795993 | None:intergenic |
| CATCCTCATATATTCTATTC+AGG | 0.354033 | 4.3:-4794903 | MS.gene55782:intron |
| AAAGCTGACATAGGATGCTT+TGG | 0.369497 | 4.3:+4795789 | None:intergenic |
| CAAAGTCAATTATTACTCAT+TGG | 0.370840 | 4.3:+4794473 | None:intergenic |
| CAAATCTATTGTTGCAAAGC+TGG | 0.374240 | 4.3:-4794505 | MS.gene55782:CDS |
| GTTAGACAGATTCTCAGAAA+TGG | 0.376205 | 4.3:+4796766 | None:intergenic |
| TTTAGATGGCTAAGAAGAAC+AGG | 0.380697 | 4.3:-4795158 | MS.gene55782:intron |
| AGCTATGATGTTGGAATCAT+TGG | 0.383362 | 4.3:+4796808 | None:intergenic |
| TTTGTAAGCCTCCATTTCTT+GGG | 0.388249 | 4.3:+4795125 | None:intergenic |
| ATAGGATGCTTTGGTTTCAA+TGG | 0.388725 | 4.3:+4795798 | None:intergenic |
| CATAATTGTACCTCTTCATA+AGG | 0.394411 | 4.3:+4795252 | None:intergenic |
| TTCCTCTTGATTTCTTTGTC+GGG | 0.407431 | 4.3:+4796864 | None:intergenic |
| TTCTTCGGCATACATGTTAT+GGG | 0.422963 | 4.3:-4796246 | MS.gene55782:CDS |
| TGCAGACAACAAGGGTGTCT+TGG | 0.424980 | 4.3:-4795730 | MS.gene55782:CDS |
| ATGTCCTTAAATTCTGCCTC+TGG | 0.426198 | 4.3:+4796068 | None:intergenic |
| GCAAGATCTGCTTGAGATGC+AGG | 0.431264 | 4.3:-4796684 | MS.gene55782:CDS |
| AGCATGTTTCCTCCAACTCC+TGG | 0.432342 | 4.3:+4794753 | None:intergenic |
| TTTGGCTTTCAACAGCTCTT+CGG | 0.438123 | 4.3:+4796625 | None:intergenic |
| ATGATTGGTGCAGGTTAAGA+AGG | 0.440565 | 4.3:-4796096 | MS.gene55782:intron |
| AGAAGCAAGGAAGAGTATAC+TGG | 0.445784 | 4.3:-4794784 | MS.gene55782:CDS |
| TGTTCCTTGTCTTTCACCAT+AGG | 0.447107 | 4.3:+4796317 | None:intergenic |
| TGATTTCTTTGTCGGGATCT+CGG | 0.448117 | 4.3:+4796871 | None:intergenic |
| AGATGAGATCTTGAAGCAAA+AGG | 0.457726 | 4.3:-4796603 | MS.gene55782:CDS |
| AAAAGAATTCCGATCCAAAC+AGG | 0.460635 | 4.3:-4794939 | MS.gene55782:CDS |
| GGATGCATACAAGAAGGAAA+TGG | 0.463280 | 4.3:-4794538 | MS.gene55782:CDS |
| AATGATTCCAACATCATAGC+TGG | 0.469777 | 4.3:-4796806 | MS.gene55782:CDS |
| GGAGCAATATGCCCAAGAAA+TGG | 0.469866 | 4.3:-4795136 | MS.gene55782:CDS |
| GCTTGAGATGCAGGAAAAGA+TGG | 0.475770 | 4.3:-4796675 | MS.gene55782:CDS |
| TTAGACAGATTCTCAGAAAT+GGG | 0.478209 | 4.3:+4796767 | None:intergenic |
| ACACACTTGTTTCAATGAAG+TGG | 0.480362 | 4.3:-4794728 | MS.gene55782:CDS |
| GAATCTGTCTAACCCTAAGA+AGG | 0.489907 | 4.3:-4796756 | MS.gene55782:CDS |
| TCACCTGAATAGAATATATG+AGG | 0.495351 | 4.3:+4794900 | None:intergenic |
| ATGTTGGAATCATTGGTTGA+TGG | 0.499815 | 4.3:+4796815 | None:intergenic |
| AGACAAGGAACAAGAAAAGA+AGG | 0.503199 | 4.3:-4796306 | MS.gene55782:CDS |
| AGTATACTGGAGGAACGTCC+AGG | 0.504758 | 4.3:-4794771 | MS.gene55782:CDS |
| CAATGTACAGAATTTGCCTA+TGG | 0.505456 | 4.3:-4796333 | MS.gene55782:intron |
| AATTGAGGCAATGAAACTCT+TGG | 0.505662 | 4.3:-4795925 | MS.gene55782:CDS |
| AGGAAGCAGAAAGGCTCTCA+AGG | 0.506919 | 4.3:-4796846 | MS.gene55782:CDS |
| TGTTGGAATCATTGGTTGAT+GGG | 0.514270 | 4.3:+4796816 | None:intergenic |
| CTGGAGGAACGTCCAGGAGT+TGG | 0.521217 | 4.3:-4794765 | MS.gene55782:CDS |
| CATAACATGTATGCCGAAGA+AGG | 0.530436 | 4.3:+4796248 | None:intergenic |
| TCTTGTTTACTAATGATAGG+AGG | 0.532413 | 4.3:-4795764 | MS.gene55782:CDS |
| CAAGAAGAACAAGAAAGAGA+AGG | 0.537336 | 4.3:-4795823 | MS.gene55782:CDS |
| TGCAAATCTTATGAAGGAAG+AGG | 0.537954 | 4.3:-4795082 | MS.gene55782:CDS |
| GAGGAACGTCCAGGAGTTGG+AGG | 0.538510 | 4.3:-4794762 | MS.gene55782:CDS |
| TGTTATGGGTCAAAGATCAA+TGG | 0.542670 | 4.3:-4796232 | MS.gene55782:CDS |
| ATGATTCCAACATCATAGCT+GGG | 0.548826 | 4.3:-4796805 | MS.gene55782:CDS |
| GGCAATGAAACTCTTGGAAG+AGG | 0.550214 | 4.3:-4795919 | MS.gene55782:CDS |
| TGGCAAAGCATCTGAAGCAA+TGG | 0.552222 | 4.3:-4794559 | MS.gene55782:CDS |
| CTTCGGTCTTCTCTTTCTCG+AGG | 0.553334 | 4.3:+4796642 | None:intergenic |
| AGCTATTCTTGCAGACAACA+AGG | 0.554530 | 4.3:-4795739 | MS.gene55782:CDS |
| AATAGAATATATGAGGATGC+AGG | 0.554919 | 4.3:+4794907 | None:intergenic |
| CTTGTTTACTAATGATAGGA+GGG | 0.555181 | 4.3:-4795763 | MS.gene55782:CDS |
| GTTGGAATCATTGGTTGATG+GGG | 0.557105 | 4.3:+4796817 | None:intergenic |
| GTTTATGCAATTCAAACAAG+AGG | 0.559702 | 4.3:-4795859 | MS.gene55782:CDS |
| GTGAGGAAGATAAACAATTG+TGG | 0.559951 | 4.3:-4794584 | MS.gene55782:CDS |
| GGGACTAAATGGAAGACAGT+TGG | 0.560896 | 4.3:-4796032 | MS.gene55782:CDS |
| GAAGATAAACAATTGTGGAA+TGG | 0.568238 | 4.3:-4794579 | MS.gene55782:CDS |
| AAAGAAACAACAAAAGCCAA+AGG | 0.574463 | 4.3:-4796720 | MS.gene55782:CDS |
| AGAAGAGAAGAAGCCTTATG+AGG | 0.578854 | 4.3:-4796006 | MS.gene55782:CDS |
| ATCCCGACAAAGAAATCAAG+AGG | 0.579809 | 4.3:-4796866 | MS.gene55782:CDS |
| ACAGAAGCAGAAGACTGCTA+TGG | 0.587399 | 4.3:-4795895 | MS.gene55782:CDS |
| GAAATCAAGAGGAAGCAGAA+AGG | 0.590805 | 4.3:-4796855 | MS.gene55782:CDS |
| CCAAGATCACATCTGAAGAG+TGG | 0.592813 | 4.3:-4795302 | MS.gene55782:CDS |
| GGAGGCTGCAAATCTTATGA+AGG | 0.596196 | 4.3:-4795088 | MS.gene55782:CDS |
| TGCCTCCCCAGCTATGATGT+TGG | 0.596788 | 4.3:+4796799 | None:intergenic |
| AGCAATGGATGCATACAAGA+AGG | 0.597525 | 4.3:-4794544 | MS.gene55782:CDS |
| ATGAACCAACTAACCATGGT+GGG | 0.603366 | 4.3:+4796518 | None:intergenic |
| AGACAACAAGGGTGTCTTGG+AGG | 0.604107 | 4.3:-4795727 | MS.gene55782:intron |
| TGCATACAAGAAGGAAATGG+AGG | 0.608817 | 4.3:-4794535 | MS.gene55782:CDS |
| TTCCATGCAGCAAAGAAGCA+AGG | 0.615026 | 4.3:-4794797 | MS.gene55782:intron |
| GAAAGAATTCAAACCCACCA+TGG | 0.617162 | 4.3:-4796531 | MS.gene55782:intron |
| CGGGATCTCGGCAACTACGT+CGG | 0.621564 | 4.3:+4796883 | None:intergenic |
| ACTTGTTTCAATGAAGTGGA+AGG | 0.625574 | 4.3:-4794724 | MS.gene55782:intron |
| AATCTGTCTAACCCTAAGAA+GGG | 0.626603 | 4.3:-4796755 | MS.gene55782:CDS |
| CAAACTGAAGAAAGATGAGG+AGG | 0.628380 | 4.3:-4795106 | MS.gene55782:CDS |
| TTATTTGCAAGTAATTACAA+AGG | 0.633815 | 4.3:-4795958 | MS.gene55782:CDS |
| TTACAAACTGAAGAAAGATG+AGG | 0.634789 | 4.3:-4795109 | MS.gene55782:CDS |
| GCAATATGCCCAAGAAATGG+AGG | 0.637518 | 4.3:-4795133 | MS.gene55782:CDS |
| AGCAAGGAAGAGTATACTGG+AGG | 0.646246 | 4.3:-4794781 | MS.gene55782:CDS |
| ATTTATATAGGATATGAGTG+AGG | 0.652499 | 4.3:-4794601 | MS.gene55782:intron |
| GATGAAGAACTCGAGAATCG+TGG | 0.659301 | 4.3:-4796581 | MS.gene55782:CDS |
| TTTGCCTATGGTGAAAGACA+AGG | 0.660185 | 4.3:-4796321 | MS.gene55782:CDS |
| GGTCAAAGATCAATGGCATG+AGG | 0.662193 | 4.3:-4796225 | MS.gene55782:intron |
| TTCCAACATCATAGCTGGGG+AGG | 0.663327 | 4.3:-4796801 | MS.gene55782:CDS |
| GGTTAAGAAGGAAAATCCAG+AGG | 0.669344 | 4.3:-4796084 | MS.gene55782:CDS |
| TGATTCCAACATCATAGCTG+GGG | 0.673997 | 4.3:-4796804 | MS.gene55782:CDS |
| AGAACTCGAGAATCGTGGCA+AGG | 0.678863 | 4.3:-4796576 | MS.gene55782:CDS |
| AATGAACCAACTAACCATGG+TGG | 0.685953 | 4.3:+4796517 | None:intergenic |
| GCTATTCTTGCAGACAACAA+GGG | 0.690298 | 4.3:-4795738 | MS.gene55782:CDS |
| TTAGATGGCTAAGAAGAACA+GGG | 0.692791 | 4.3:-4795157 | MS.gene55782:intron |
| TCAGAAGAAGAAACATAACA+AGG | 0.711427 | 4.3:-4794965 | MS.gene55782:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATTAATGAAAAACTAA+TGG | + | chr4.3:4796151-4796170 | None:intergenic | 10.0% |
| !! | ATTGAATAAAATTTACTTAA+TGG | - | chr4.3:4796025-4796044 | MS.gene55782:CDS | 10.0% |
| !!! | ACTATTATTATATATTGATT+TGG | - | chr4.3:4796739-4796758 | MS.gene55782:CDS | 10.0% |
| !!! | CATTTTTACTATTATTTTAT+TGG | - | chr4.3:4794885-4794904 | MS.gene55782:intron | 10.0% |
| !! | AATCATAATGTTAATTCTAT+TGG | + | chr4.3:4796008-4796027 | None:intergenic | 15.0% |
| !! | CATATCCTATATAAATAAAT+GGG | + | chr4.3:4796767-4796786 | None:intergenic | 15.0% |
| !! | TCATATCCTATATAAATAAA+TGG | + | chr4.3:4796768-4796787 | None:intergenic | 15.0% |
| !!! | TTTTTAATTTTTAGGGTTTA+GGG | - | chr4.3:4794943-4794962 | MS.gene55782:CDS | 15.0% |
| !!! | TTTTTTAATTTTTAGGGTTT+AGG | - | chr4.3:4794942-4794961 | MS.gene55782:CDS | 15.0% |
| !! | AGACATTAAATGAATATTAC+AGG | + | chr4.3:4794986-4795005 | None:intergenic | 20.0% |
| !! | GAATAAAATTTACTTAATGG+TGG | - | chr4.3:4796028-4796047 | MS.gene55782:CDS | 20.0% |
| !! | TTATTTGCAAGTAATTACAA+AGG | - | chr4.3:4795414-4795433 | MS.gene55782:intron | 20.0% |
| !!! | AGGTAATTGATTTTATGATT+GGG | - | chr4.3:4795665-4795684 | MS.gene55782:intron | 20.0% |
| !!! | TTTTCTTGTTTACTAATGAT+AGG | - | chr4.3:4795605-4795624 | MS.gene55782:intron | 20.0% |
| ! | AAAAACTGAAAACATGATCA+AGG | - | chr4.3:4796368-4796387 | MS.gene55782:intron | 25.0% |
| ! | AAGAAGGAAAAGAAAAAGAA+TGG | - | chr4.3:4795082-4795101 | MS.gene55782:CDS | 25.0% |
| ! | AATAAGCTGTTTATTCAAAC+AGG | + | chr4.3:4795691-4795710 | None:intergenic | 25.0% |
| ! | AGAAGGAAAAGAAAAAGAAT+GGG | - | chr4.3:4795083-4795102 | MS.gene55782:CDS | 25.0% |
| ! | AGCAATCAAATCTAACTATT+AGG | - | chr4.3:4795184-4795203 | MS.gene55782:intron | 25.0% |
| ! | ATTTATATAGGATATGAGTG+AGG | - | chr4.3:4796771-4796790 | MS.gene55782:CDS | 25.0% |
| ! | TGGTTCCCATTTATTTATAT+AGG | - | chr4.3:4796759-4796778 | MS.gene55782:CDS | 25.0% |
| ! | TTTCTTACACTCTACTTAAT+TGG | - | chr4.3:4796186-4796205 | MS.gene55782:intron | 25.0% |
| !! | AAGGACATTTCAAACATTTT+GGG | - | chr4.3:4795319-4795338 | MS.gene55782:intron | 25.0% |
| !! | CTTAATTGGAAACTTTTAGA+TGG | - | chr4.3:4796200-4796219 | MS.gene55782:intron | 25.0% |
| !! | GAAAGTCAATTTAACTTTGT+AGG | - | chr4.3:4796493-4796512 | MS.gene55782:intron | 25.0% |
| !! | TAAGGACATTTCAAACATTT+TGG | - | chr4.3:4795318-4795337 | MS.gene55782:intron | 25.0% |
| !! | TGAATTTATGGATTGATGAT+TGG | - | chr4.3:4795261-4795280 | MS.gene55782:intron | 25.0% |
| !!! | GAGGTAATTGATTTTATGAT+TGG | - | chr4.3:4795664-4795683 | MS.gene55782:intron | 25.0% |
| AAAGAAACAACAAAAGCCAA+AGG | - | chr4.3:4794652-4794671 | MS.gene55782:intron | 30.0% | |
| AAAGGAAAAACGTGAAATTG+AGG | - | chr4.3:4795432-4795451 | MS.gene55782:intron | 30.0% | |
| AACAAGAAAAAAGCTGACAT+AGG | + | chr4.3:4795595-4795614 | None:intergenic | 30.0% | |
| AATAGAATATATGAGGATGC+AGG | + | chr4.3:4796468-4796487 | None:intergenic | 30.0% | |
| ACATGACAGAAGAACAAAAA+AGG | - | chr4.3:4796097-4796116 | MS.gene55782:intron | 30.0% | |
| CATAAGTTGTGAGACTATTT+GGG | + | chr4.3:4795891-4795910 | None:intergenic | 30.0% | |
| CATAATTGTACCTCTTCATA+AGG | + | chr4.3:4796123-4796142 | None:intergenic | 30.0% | |
| CATCCTCATATATTCTATTC+AGG | - | chr4.3:4796469-4796488 | MS.gene55782:intron | 30.0% | |
| CTTGTTTACTAATGATAGGA+GGG | - | chr4.3:4795609-4795628 | MS.gene55782:intron | 30.0% | |
| GAAGATAAACAATTGTGGAA+TGG | - | chr4.3:4796793-4796812 | MS.gene55782:CDS | 30.0% | |
| GATGTTGCAATGTGAATTTA+TGG | - | chr4.3:4795249-4795268 | MS.gene55782:intron | 30.0% | |
| GTTTATGCAATTCAAACAAG+AGG | - | chr4.3:4795513-4795532 | MS.gene55782:intron | 30.0% | |
| TCACCTGAATAGAATATATG+AGG | + | chr4.3:4796475-4796494 | None:intergenic | 30.0% | |
| TCAGAAGAAGAAACATAACA+AGG | - | chr4.3:4796407-4796426 | MS.gene55782:intron | 30.0% | |
| TTACAAACTGAAGAAAGATG+AGG | - | chr4.3:4796263-4796282 | MS.gene55782:CDS | 30.0% | |
| TTAGACAGATTCTCAGAAAT+GGG | + | chr4.3:4794608-4794627 | None:intergenic | 30.0% | |
| ! | AGGACATTTCAAACATTTTG+GGG | - | chr4.3:4795320-4795339 | MS.gene55782:intron | 30.0% |
| ! | TCTTGTTTACTAATGATAGG+AGG | - | chr4.3:4795608-4795627 | MS.gene55782:intron | 30.0% |
| ! | TTTAGGGTTTGTGTTGAAAT+TGG | - | chr4.3:4794959-4794978 | MS.gene55782:CDS | 30.0% |
| AAAAGAATTCCGATCCAAAC+AGG | - | chr4.3:4796433-4796452 | MS.gene55782:intron | 35.0% | |
| AAATCCAGAGGCAGAATTTA+AGG | - | chr4.3:4795300-4795319 | MS.gene55782:CDS | 35.0% | |
| AATCTGTCTAACCCTAAGAA+GGG | - | chr4.3:4794617-4794636 | MS.gene55782:intron | 35.0% | |
| AATGATTCCAACATCATAGC+TGG | - | chr4.3:4794566-4794585 | MS.gene55782:CDS | 35.0% | |
| AATTGAGGCAATGAAACTCT+TGG | - | chr4.3:4795447-4795466 | MS.gene55782:intron | 35.0% | |
| ACACACTTGTTTCAATGAAG+TGG | - | chr4.3:4796644-4796663 | MS.gene55782:CDS | 35.0% | |
| ACTTGTTTCAATGAAGTGGA+AGG | - | chr4.3:4796648-4796667 | MS.gene55782:CDS | 35.0% | |
| AGACAAGGAACAAGAAAAGA+AGG | - | chr4.3:4795066-4795085 | MS.gene55782:CDS | 35.0% | |
| AGATGAGATCTTGAAGCAAA+AGG | - | chr4.3:4794769-4794788 | MS.gene55782:CDS | 35.0% | |
| AGCTATGATGTTGGAATCAT+TGG | + | chr4.3:4794567-4794586 | None:intergenic | 35.0% | |
| ATGATTCCAACATCATAGCT+GGG | - | chr4.3:4794567-4794586 | MS.gene55782:CDS | 35.0% | |
| CAAATCTATTGTTGCAAAGC+TGG | - | chr4.3:4796867-4796886 | MS.gene55782:CDS | 35.0% | |
| CAAGAAGAACAAGAAAGAGA+AGG | - | chr4.3:4795549-4795568 | MS.gene55782:intron | 35.0% | |
| CAATGTACAGAATTTGCCTA+TGG | - | chr4.3:4795039-4795058 | MS.gene55782:CDS | 35.0% | |
| CTTCCTCTTGATTTCTTTGT+CGG | + | chr4.3:4794512-4794531 | None:intergenic | 35.0% | |
| CTTGCAATTGCTCAAGAAAA+AGG | - | chr4.3:4796344-4796363 | MS.gene55782:intron | 35.0% | |
| GAAATACCAAGCTGAAAAAG+AGG | - | chr4.3:4795390-4795409 | MS.gene55782:intron | 35.0% | |
| GCATAAGTTGTGAGACTATT+TGG | + | chr4.3:4795892-4795911 | None:intergenic | 35.0% | |
| GTGAGGAAGATAAACAATTG+TGG | - | chr4.3:4796788-4796807 | MS.gene55782:CDS | 35.0% | |
| GTTAGACAGATTCTCAGAAA+TGG | + | chr4.3:4794609-4794628 | None:intergenic | 35.0% | |
| TGAAATGAACCAACTAACCA+TGG | + | chr4.3:4794861-4794880 | None:intergenic | 35.0% | |
| TGAGAAAAAAAGGCCTTCTT+CGG | - | chr4.3:4795111-4795130 | MS.gene55782:CDS | 35.0% | |
| TGCAAATCTTATGAAGGAAG+AGG | - | chr4.3:4796290-4796309 | MS.gene55782:CDS | 35.0% | |
| TGTGAATGCTACACAACATT+TGG | + | chr4.3:4795936-4795955 | None:intergenic | 35.0% | |
| TGTTATGGGTCAAAGATCAA+TGG | - | chr4.3:4795140-4795159 | MS.gene55782:CDS | 35.0% | |
| TTAGATGGCTAAGAAGAACA+GGG | - | chr4.3:4796215-4796234 | MS.gene55782:intron | 35.0% | |
| TTCCTCTTGATTTCTTTGTC+GGG | + | chr4.3:4794511-4794530 | None:intergenic | 35.0% | |
| TTCTTCGGCATACATGTTAT+GGG | - | chr4.3:4795126-4795145 | MS.gene55782:CDS | 35.0% | |
| TTGCTTCAAGATCTCATCTT+TGG | + | chr4.3:4794768-4794787 | None:intergenic | 35.0% | |
| TTTAGATGGCTAAGAAGAAC+AGG | - | chr4.3:4796214-4796233 | MS.gene55782:intron | 35.0% | |
| TTTGTAAGCCTCCATTTCTT+GGG | + | chr4.3:4796250-4796269 | None:intergenic | 35.0% | |
| ! | ACAAAAAAGGCCTTATGAAG+AGG | - | chr4.3:4796110-4796129 | MS.gene55782:intron | 35.0% |
| ! | ATAGGATGCTTTGGTTTCAA+TGG | + | chr4.3:4795577-4795596 | None:intergenic | 35.0% |
| ! | ATGTTGGAATCATTGGTTGA+TGG | + | chr4.3:4794560-4794579 | None:intergenic | 35.0% |
| ! | CACATTTTGGACAACACTAA+AGG | - | chr4.3:4795954-4795973 | MS.gene55782:CDS | 35.0% |
| ! | CTTTTTCTTGAGCAATTGCA+AGG | + | chr4.3:4796346-4796365 | None:intergenic | 35.0% |
| ! | TGTGTAGCATTCACACATTT+TGG | - | chr4.3:4795941-4795960 | MS.gene55782:CDS | 35.0% |
| ! | TGTTGGAATCATTGGTTGAT+GGG | + | chr4.3:4794559-4794578 | None:intergenic | 35.0% |
| !! | CAAACATTTTGGGGACTAAA+TGG | - | chr4.3:4795329-4795348 | MS.gene55782:intron | 35.0% |
| !! | CTTCATGTTTCTGAAGTTTC+AGG | + | chr4.3:4796323-4796342 | None:intergenic | 35.0% |
| !!! | AAGAAGGCCTTTTTTTCTCA+GGG | + | chr4.3:4795111-4795130 | None:intergenic | 35.0% |
| !!! | AATAAGCCTCTTTTTCAGCT+TGG | + | chr4.3:4795399-4795418 | None:intergenic | 35.0% |
| AAAGCTGACATAGGATGCTT+TGG | + | chr4.3:4795586-4795605 | None:intergenic | 40.0% | |
| AATGAACCAACTAACCATGG+TGG | + | chr4.3:4794858-4794877 | None:intergenic | 40.0% | |
| AGCAATGGATGCATACAAGA+AGG | - | chr4.3:4796828-4796847 | MS.gene55782:CDS | 40.0% | |
| AGCTATTCTTGCAGACAACA+AGG | - | chr4.3:4795633-4795652 | MS.gene55782:intron | 40.0% | |
| ATCCCGACAAAGAAATCAAG+AGG | - | chr4.3:4794506-4794525 | MS.gene55782:CDS | 40.0% | |
| ATGAACCAACTAACCATGGT+GGG | + | chr4.3:4794857-4794876 | None:intergenic | 40.0% | |
| ATGATTGGTGCAGGTTAAGA+AGG | - | chr4.3:4795276-4795295 | MS.gene55782:CDS | 40.0% | |
| ATGTCCTTAAATTCTGCCTC+TGG | + | chr4.3:4795307-4795326 | None:intergenic | 40.0% | |
| CAAACTGAAGAAAGATGAGG+AGG | - | chr4.3:4796266-4796285 | MS.gene55782:CDS | 40.0% | |
| CATAACATGTATGCCGAAGA+AGG | + | chr4.3:4795127-4795146 | None:intergenic | 40.0% | |
| CTTCTTCGGCATACATGTTA+TGG | - | chr4.3:4795125-4795144 | MS.gene55782:CDS | 40.0% | |
| GAAAGAATTCAAACCCACCA+TGG | - | chr4.3:4794841-4794860 | MS.gene55782:intron | 40.0% | |
| GAAATCAAGAGGAAGCAGAA+AGG | - | chr4.3:4794517-4794536 | MS.gene55782:CDS | 40.0% | |
| GAATCTGTCTAACCCTAAGA+AGG | - | chr4.3:4794616-4794635 | MS.gene55782:intron | 40.0% | |
| GCTATTCTTGCAGACAACAA+GGG | - | chr4.3:4795634-4795653 | MS.gene55782:intron | 40.0% | |
| GCTTGGTATTTCTCCTCATA+AGG | + | chr4.3:4795382-4795401 | None:intergenic | 40.0% | |
| GGATGCATACAAGAAGGAAA+TGG | - | chr4.3:4796834-4796853 | MS.gene55782:CDS | 40.0% | |
| GGTTAAGAAGGAAAATCCAG+AGG | - | chr4.3:4795288-4795307 | MS.gene55782:CDS | 40.0% | |
| GTTTGTAAGCCTCCATTTCT+TGG | + | chr4.3:4796251-4796270 | None:intergenic | 40.0% | |
| TGATTCCAACATCATAGCTG+GGG | - | chr4.3:4794568-4794587 | MS.gene55782:CDS | 40.0% | |
| TGATTTCTTTGTCGGGATCT+CGG | + | chr4.3:4794504-4794523 | None:intergenic | 40.0% | |
| TGCATACAAGAAGGAAATGG+AGG | - | chr4.3:4796837-4796856 | MS.gene55782:CDS | 40.0% | |
| TGTTCCTTGTCTTTCACCAT+AGG | + | chr4.3:4795058-4795077 | None:intergenic | 40.0% | |
| TTTGCCTATGGTGAAAGACA+AGG | - | chr4.3:4795051-4795070 | MS.gene55782:CDS | 40.0% | |
| ! | AGAAGAGAAGAAGCCTTATG+AGG | - | chr4.3:4795366-4795385 | MS.gene55782:intron | 40.0% |
| ! | AGAAGCAAGGAAGAGTATAC+TGG | - | chr4.3:4796588-4796607 | MS.gene55782:CDS | 40.0% |
| ! | ATGCAGCTTTTCCCTTCTTA+GGG | + | chr4.3:4794631-4794650 | None:intergenic | 40.0% |
| ! | GTTGGAATCATTGGTTGATG+GGG | + | chr4.3:4794558-4794577 | None:intergenic | 40.0% |
| ! | TATGAGGATGCAGGTCTTTT+AGG | + | chr4.3:4796459-4796478 | None:intergenic | 40.0% |
| ! | TATGGATTGATGATTGGTGC+AGG | - | chr4.3:4795267-4795286 | MS.gene55782:CDS | 40.0% |
| ! | TCTTTTAGGCCTGTTTGGAT+CGG | + | chr4.3:4796445-4796464 | None:intergenic | 40.0% |
| !! | TTTGGCTTTCAACAGCTCTT+CGG | + | chr4.3:4794750-4794769 | None:intergenic | 40.0% |
| !!! | GAAGAAGGCCTTTTTTTCTC+AGG | + | chr4.3:4795112-4795131 | None:intergenic | 40.0% |
| AACACTAAAGGCAGATGAGC+CGG | - | chr4.3:4795966-4795985 | MS.gene55782:CDS | 45.0% | |
| ACAGAAGCAGAAGACTGCTA+TGG | - | chr4.3:4795477-4795496 | MS.gene55782:intron | 45.0% | |
| ATGGGTGCCCTGAGAAAAAA+AGG | - | chr4.3:4795101-4795120 | MS.gene55782:CDS | 45.0% | |
| CCAAGATCACATCTGAAGAG+TGG | - | chr4.3:4796070-4796089 | MS.gene55782:CDS | 45.0% | |
| CCACTCTTCAGATGTGATCT+TGG | + | chr4.3:4796073-4796092 | None:intergenic | 45.0% | |
| GATGAAGAACTCGAGAATCG+TGG | - | chr4.3:4794791-4794810 | MS.gene55782:intron | 45.0% | |
| GCAATATGCCCAAGAAATGG+AGG | - | chr4.3:4796239-4796258 | MS.gene55782:CDS | 45.0% | |
| GCTTGAGATGCAGGAAAAGA+TGG | - | chr4.3:4794697-4794716 | MS.gene55782:intron | 45.0% | |
| GGAGCAATATGCCCAAGAAA+TGG | - | chr4.3:4796236-4796255 | MS.gene55782:CDS | 45.0% | |
| GGAGGCTGCAAATCTTATGA+AGG | - | chr4.3:4796284-4796303 | MS.gene55782:CDS | 45.0% | |
| GGCAATGAAACTCTTGGAAG+AGG | - | chr4.3:4795453-4795472 | MS.gene55782:intron | 45.0% | |
| GGGACTAAATGGAAGACAGT+TGG | - | chr4.3:4795340-4795359 | MS.gene55782:intron | 45.0% | |
| GGTCAAAGATCAATGGCATG+AGG | - | chr4.3:4795147-4795166 | MS.gene55782:CDS | 45.0% | |
| TCAAACCCACCATGGTTAGT+TGG | - | chr4.3:4794849-4794868 | MS.gene55782:intron | 45.0% | |
| TGCTCGAAAGATCGTTCCTT+TGG | + | chr4.3:4794671-4794690 | None:intergenic | 45.0% | |
| TTCCATGCAGCAAAGAAGCA+AGG | - | chr4.3:4796575-4796594 | MS.gene55782:CDS | 45.0% | |
| TTCCTTGCTTCTTTGCTGCA+TGG | + | chr4.3:4796580-4796599 | None:intergenic | 45.0% | |
| ! | AGCAAGGAAGAGTATACTGG+AGG | - | chr4.3:4796591-4796610 | MS.gene55782:CDS | 45.0% |
| ! | GATGCAGCTTTTCCCTTCTT+AGG | + | chr4.3:4794632-4794651 | None:intergenic | 45.0% |
| ! | TGGCAAAGCATCTGAAGCAA+TGG | - | chr4.3:4796813-4796832 | MS.gene55782:CDS | 45.0% |
| !!! | ATATCATTTTTTTAATTTTT+AGG | - | chr4.3:4794935-4794954 | MS.gene55782:CDS | 5.0% |
| !!! | TATCATTTTTTTAATTTTTA+GGG | - | chr4.3:4794936-4794955 | MS.gene55782:CDS | 5.0% |
| !!! | TTTAATTTTTTTTTTTATGT+AGG | - | chr4.3:4796684-4796703 | MS.gene55782:CDS | 5.0% |
| AGAACTCGAGAATCGTGGCA+AGG | - | chr4.3:4794796-4794815 | MS.gene55782:intron | 50.0% | |
| AGATGAGCCGGATCGTGTTT+GGG | - | chr4.3:4795978-4795997 | MS.gene55782:CDS | 50.0% | |
| AGCATGTTTCCTCCAACTCC+TGG | + | chr4.3:4796622-4796641 | None:intergenic | 50.0% | |
| AGGAAGCAGAAAGGCTCTCA+AGG | - | chr4.3:4794526-4794545 | MS.gene55782:CDS | 50.0% | |
| AGTATACTGGAGGAACGTCC+AGG | - | chr4.3:4796601-4796620 | MS.gene55782:CDS | 50.0% | |
| CTTCGGTCTTCTCTTTCTCG+AGG | + | chr4.3:4794733-4794752 | None:intergenic | 50.0% | |
| GCAAGATCTGCTTGAGATGC+AGG | - | chr4.3:4794688-4794707 | MS.gene55782:intron | 50.0% | |
| TTCCAACATCATAGCTGGGG+AGG | - | chr4.3:4794571-4794590 | MS.gene55782:CDS | 50.0% | |
| ! | GCAGGTCTTTTAGGCCTGTT+TGG | + | chr4.3:4796450-4796469 | None:intergenic | 50.0% |
| !! | AGACAACAAGGGTGTCTTGG+AGG | - | chr4.3:4795645-4795664 | MS.gene55782:intron | 50.0% |
| !! | ATGGTGGTGTTGTGCTTTGC+AGG | - | chr4.3:4796044-4796063 | MS.gene55782:CDS | 50.0% |
| !! | TGCAGACAACAAGGGTGTCT+TGG | - | chr4.3:4795642-4795661 | MS.gene55782:intron | 50.0% |
| CAGATGAGCCGGATCGTGTT+TGG | - | chr4.3:4795977-4795996 | MS.gene55782:CDS | 55.0% | |
| GATGAGCCGGATCGTGTTTG+GGG | - | chr4.3:4795979-4795998 | MS.gene55782:CDS | 55.0% | |
| TGCCTCCCCAGCTATGATGT+TGG | + | chr4.3:4794576-4794595 | None:intergenic | 55.0% | |
| TGGACACCCCAAACACGATC+CGG | + | chr4.3:4795988-4796007 | None:intergenic | 55.0% | |
| CGGGATCTCGGCAACTACGT+CGG | + | chr4.3:4794492-4794511 | None:intergenic | 60.0% | |
| CTGGAGGAACGTCCAGGAGT+TGG | - | chr4.3:4796607-4796626 | MS.gene55782:CDS | 60.0% | |
| GAGGAACGTCCAGGAGTTGG+AGG | - | chr4.3:4796610-4796629 | MS.gene55782:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 4794485 | 4796909 | 4794485 | ID=MS.gene55782 |
| chr4.3 | mRNA | 4794485 | 4796909 | 4794485 | ID=MS.gene55782.t1;Parent=MS.gene55782 |
| chr4.3 | exon | 4796532 | 4796909 | 4796532 | ID=MS.gene55782.t1.exon1;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4796532 | 4796909 | 4796532 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4796226 | 4796345 | 4796226 | ID=MS.gene55782.t1.exon2;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4796226 | 4796345 | 4796226 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4795728 | 4796105 | 4795728 | ID=MS.gene55782.t1.exon3;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4795728 | 4796105 | 4795728 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4795263 | 4795328 | 4795263 | ID=MS.gene55782.t1.exon4;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4795263 | 4795328 | 4795263 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4794904 | 4795175 | 4794904 | ID=MS.gene55782.t1.exon5;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4794904 | 4795175 | 4794904 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4794725 | 4794809 | 4794725 | ID=MS.gene55782.t1.exon6;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4794725 | 4794809 | 4794725 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| chr4.3 | exon | 4794485 | 4794613 | 4794485 | ID=MS.gene55782.t1.exon7;Parent=MS.gene55782.t1 |
| chr4.3 | CDS | 4794485 | 4794613 | 4794485 | ID=cds.MS.gene55782.t1;Parent=MS.gene55782.t1 |
| Gene Sequence |
| Protein sequence |
