Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04541.t1 | XP_013460204.1 | 98.6 | 486 | 6 | 1 | 1 | 485 | 1 | 486 | 4.80E-270 | 939.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04541.t1 | Q8W032 | 59.7 | 489 | 164 | 8 | 8 | 484 | 37 | 504 | 2.4e-153 | 543.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04541.t1 | A0A072V7S0 | 98.6 | 486 | 6 | 1 | 1 | 485 | 1 | 486 | 3.4e-270 | 939.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04541 | MS.gene044021 | PPI |
| MS.gene04541 | MS.gene35150 | PPI |
| MS.gene001968 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene021870 | PPI |
| MS.gene04541 | MS.gene24383 | PPI |
| MS.gene04541 | MS.gene045765 | PPI |
| MS.gene04541 | MS.gene003428 | PPI |
| MS.gene04541 | MS.gene37574 | PPI |
| MS.gene04541 | MS.gene78156 | PPI |
| MS.gene058013 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene47008 | PPI |
| MS.gene04541 | MS.gene016938 | PPI |
| MS.gene023147 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene04020 | PPI |
| MS.gene04501 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene04418 | PPI |
| MS.gene062778 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene67108 | PPI |
| MS.gene04541 | MS.gene028307 | PPI |
| MS.gene04541 | MS.gene08109 | PPI |
| MS.gene22500 | MS.gene04541 | PPI |
| MS.gene05640 | MS.gene04541 | PPI |
| MS.gene04541 | MS.gene04079 | PPI |
| MS.gene04541 | MS.gene36485 | PPI |
| MS.gene04541 | MS.gene066551 | PPI |
| MS.gene04541 | MS.gene28807 | PPI |
| MS.gene04541 | MS.gene072702 | PPI |
| MS.gene04541 | MS.gene07051 | PPI |
| MS.gene04541 | MS.gene071261 | PPI |
| MS.gene066552 | MS.gene04541 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04541.t1 | MTR_3g463490 | 98.560 | 486 | 6 | 1 | 1 | 485 | 1 | 486 | 0.0 | 985 |
| MS.gene04541.t1 | MTR_3g463490 | 98.326 | 478 | 7 | 1 | 1 | 477 | 1 | 478 | 0.0 | 963 |
| MS.gene04541.t1 | MTR_8g099640 | 30.855 | 269 | 166 | 7 | 79 | 334 | 493 | 754 | 2.21e-23 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04541.t1 | AT2G29680 | 60.677 | 473 | 162 | 8 | 17 | 484 | 54 | 507 | 0.0 | 575 |
| MS.gene04541.t1 | AT1G07270 | 59.714 | 489 | 164 | 8 | 8 | 484 | 37 | 504 | 0.0 | 575 |
| MS.gene04541.t1 | AT2G29680 | 56.944 | 504 | 162 | 9 | 17 | 484 | 54 | 538 | 0.0 | 558 |
| MS.gene04541.t1 | AT1G07270 | 58.889 | 450 | 152 | 8 | 8 | 445 | 37 | 465 | 5.03e-180 | 513 |
| MS.gene04541.t1 | AT4G14700 | 31.461 | 267 | 165 | 7 | 75 | 331 | 417 | 675 | 2.11e-29 | 122 |
| MS.gene04541.t1 | AT4G12620 | 27.095 | 358 | 220 | 10 | 75 | 422 | 422 | 748 | 9.60e-26 | 111 |
Find 103 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAAAGTTGCTGCAGCTTC+TGG | 0.191734 | 3.1:-47569400 | MS.gene04541:CDS |
| ACATAAAACCCTGGGGAAAA+AGG | 0.197002 | 3.1:-47570478 | MS.gene04541:CDS |
| CACTGGTGATCTATATGTTT+TGG | 0.269767 | 3.1:+47568384 | None:intergenic |
| ATAAGTATACATCTGGAAAA+TGG | 0.278203 | 3.1:+47570177 | None:intergenic |
| TGAAAGCGAATTTACTCAAT+TGG | 0.285367 | 3.1:-47571505 | MS.gene04541:CDS |
| TGACAGTGATGTACAATTTA+CGG | 0.290593 | 3.1:+47570639 | None:intergenic |
| GCCAAGGATTGAGTCTTTCT+TGG | 0.309468 | 3.1:+47568288 | None:intergenic |
| GGGATTGTCCTAGTTTAATA+AGG | 0.315431 | 3.1:+47568045 | None:intergenic |
| TTTACCTTTGGGGTTCCATT+TGG | 0.317882 | 3.1:+47571927 | None:intergenic |
| GCCTTTCTTGAATAATCTTA+AGG | 0.338025 | 3.1:+47569781 | None:intergenic |
| TGCTTGCAATTTGAATGCTT+TGG | 0.345235 | 3.1:-47569014 | MS.gene04541:CDS |
| AGGAGAAGTGGTGGTTGGGA+TGG | 0.358395 | 3.1:+47572074 | None:intergenic |
| GGTGGTTGGGATGGGTGTGG+CGG | 0.362843 | 3.1:+47572083 | None:intergenic |
| TCAATGTTATGGCAGATACT+TGG | 0.369583 | 3.1:-47570504 | MS.gene04541:intron |
| TTTGCGGGTGGGAGGAGAAG+TGG | 0.371401 | 3.1:+47572062 | None:intergenic |
| ATATCACCTTCATCTAGTTT+AGG | 0.374357 | 3.1:+47567996 | None:intergenic |
| GGAGAAGTGGTGGTTGGGAT+GGG | 0.391658 | 3.1:+47572075 | None:intergenic |
| ATATGTGGCTGTCCTGGAAC+TGG | 0.401759 | 3.1:-47571551 | MS.gene04541:CDS |
| GTGGGAGGAGAAGTGGTGGT+TGG | 0.403628 | 3.1:+47572069 | None:intergenic |
| ATGGAGCACAGCTCTGTCTT+TGG | 0.404599 | 3.1:+47570224 | None:intergenic |
| CTCTTCTCAATTTATCATCT+CGG | 0.404980 | 3.1:+47568024 | None:intergenic |
| TGGGAGGAGAAGTGGTGGTT+GGG | 0.408613 | 3.1:+47572070 | None:intergenic |
| GTGGTTGGGATGGGTGTGGC+GGG | 0.412163 | 3.1:+47572084 | None:intergenic |
| TTTACCTATAAGTATACATC+TGG | 0.416440 | 3.1:+47570170 | None:intergenic |
| TCTTCTCAATTTATCATCTC+GGG | 0.421882 | 3.1:+47568025 | None:intergenic |
| CTGCAGGGCCTTATTAAACT+AGG | 0.430579 | 3.1:-47568053 | MS.gene04541:intron |
| CTTTATATATGTGGCTGTCC+TGG | 0.432935 | 3.1:-47571557 | MS.gene04541:CDS |
| CAAGTTCTGAAGTTGCTGTA+AGG | 0.433527 | 3.1:+47570443 | None:intergenic |
| CTGCATCACTTAAATCCAAA+TGG | 0.441547 | 3.1:-47571942 | MS.gene04541:CDS |
| GCAGGTAAGGATTGATCATA+TGG | 0.450580 | 3.1:-47568419 | MS.gene04541:intron |
| CATTTGGATTTAAGTGATGC+AGG | 0.463522 | 3.1:+47571943 | None:intergenic |
| TTGTAGATGGGGAGCAAATG+AGG | 0.465698 | 3.1:-47571700 | MS.gene04541:intron |
| GACTGATGAGGTGACTGAAT+TGG | 0.466821 | 3.1:+47572011 | None:intergenic |
| TTGCAGAGATGCAACGGCGG+GGG | 0.472950 | 3.1:+47572037 | None:intergenic |
| TCCTTAAGATTATTCAAGAA+AGG | 0.473235 | 3.1:-47569782 | MS.gene04541:CDS |
| GACAACGATTTCCCAGTTCC+AGG | 0.478633 | 3.1:+47571539 | None:intergenic |
| AGTTGCAGAGATGCAACGGC+GGG | 0.480036 | 3.1:+47572035 | None:intergenic |
| TCTTACATCATGTTCGATGT+AGG | 0.481162 | 3.1:+47570405 | None:intergenic |
| GAAGAGCAAAATGTGGTGTT+GGG | 0.482208 | 3.1:-47571620 | MS.gene04541:CDS |
| CAATTTAATGCAGTAAGCCT+TGG | 0.483021 | 3.1:+47570006 | None:intergenic |
| GAAAGCGAATTTACTCAATT+GGG | 0.484371 | 3.1:-47571504 | MS.gene04541:CDS |
| ACTGATGAGGTGACTGAATT+GGG | 0.484631 | 3.1:+47572012 | None:intergenic |
| AAGCATTGGAACTATGTGCC+AGG | 0.493882 | 3.1:-47569524 | MS.gene04541:CDS |
| GAAAATTCCATGATTCCAGC+AGG | 0.495615 | 3.1:+47568217 | None:intergenic |
| AGTGGTGGTTGGGATGGGTG+TGG | 0.498532 | 3.1:+47572080 | None:intergenic |
| GCCAAGAAAGACTCAATCCT+TGG | 0.501996 | 3.1:-47568289 | MS.gene04541:CDS |
| CGTTTGGATGAAGCAATTGA+AGG | 0.504159 | 3.1:+47572120 | None:intergenic |
| TAGCTGATCGATTTCTTCCA+AGG | 0.509008 | 3.1:-47570023 | MS.gene04541:CDS |
| CAATGTTATGGCAGATACTT+GGG | 0.510081 | 3.1:-47570503 | MS.gene04541:intron |
| ATGATGTGGCAGAGATTGTA+TGG | 0.514538 | 3.1:+47568354 | None:intergenic |
| TGGTAAGCATGAAAAGATCA+TGG | 0.521734 | 3.1:+47570205 | None:intergenic |
| ACTGACTGACTTTACCTTTG+GGG | 0.527720 | 3.1:+47571917 | None:intergenic |
| GGGAGATCTGAATCTGCGTT+TGG | 0.527722 | 3.1:+47572104 | None:intergenic |
| GGAAGAGCAAAATGTGGTGT+TGG | 0.527876 | 3.1:-47571621 | MS.gene04541:CDS |
| ATAGTTCCAATGCTTGATGT+TGG | 0.531773 | 3.1:+47569532 | None:intergenic |
| CAATTTACGGATAAAACATC+GGG | 0.531849 | 3.1:+47570652 | None:intergenic |
| AAGTTCTGAAGTTGCTGTAA+GGG | 0.532699 | 3.1:+47570444 | None:intergenic |
| CTTGGGTTACATAAAACCCT+GGG | 0.535443 | 3.1:-47570486 | MS.gene04541:CDS |
| GCAAATGAGGATTGTGAAGG+AGG | 0.535525 | 3.1:-47571687 | MS.gene04541:CDS |
| TGGATTTAAGTGATGCAGGT+TGG | 0.536334 | 3.1:+47571947 | None:intergenic |
| TTGAGTCTTTCTTGGCTCCA+CGG | 0.537855 | 3.1:+47568296 | None:intergenic |
| ACGGATAAAACATCGGGCAG+CGG | 0.539935 | 3.1:+47570658 | None:intergenic |
| TGATGTTGGAAGACGATGTA+AGG | 0.542035 | 3.1:+47569546 | None:intergenic |
| TGCAGAGATGCAACGGCGGG+GGG | 0.549879 | 3.1:+47572038 | None:intergenic |
| ACATCTGGAAAATGGAAAAG+TGG | 0.550640 | 3.1:+47570185 | None:intergenic |
| GAAATGCTCTTTGTATATGC+AGG | 0.555579 | 3.1:-47569369 | MS.gene04541:intron |
| TTTACTCAATTGGGCTGCAG+AGG | 0.556912 | 3.1:-47571495 | MS.gene04541:intron |
| GATTGTATGGTATCCACCAC+TGG | 0.560837 | 3.1:+47568367 | None:intergenic |
| GCTGGGAGTCTTTATATATG+TGG | 0.561220 | 3.1:-47571566 | MS.gene04541:CDS |
| GCGGGTGGGAGGAGAAGTGG+TGG | 0.567880 | 3.1:+47572065 | None:intergenic |
| CGTCTTCCAACATCAAGCAT+TGG | 0.568966 | 3.1:-47569538 | MS.gene04541:CDS |
| AACTGGGAAATCGTTGTCGA+TGG | 0.571839 | 3.1:-47571534 | MS.gene04541:CDS |
| AAGATTTATATAACTCGCCA+AGG | 0.575313 | 3.1:+47568272 | None:intergenic |
| TGGGAGTTGCAGAGATGCAA+CGG | 0.581077 | 3.1:+47572031 | None:intergenic |
| GTGACACCTAAACTAGATGA+AGG | 0.587105 | 3.1:-47568002 | MS.gene04541:CDS |
| ACAATTTACGGATAAAACAT+CGG | 0.587347 | 3.1:+47570651 | None:intergenic |
| GTCTACGATGGTGTGTCGTG+AGG | 0.587739 | 3.1:-47571642 | MS.gene04541:CDS |
| AACATATAGATCACCAGTGG+TGG | 0.589208 | 3.1:-47568380 | MS.gene04541:CDS |
| GTTGCAGAGATGCAACGGCG+GGG | 0.591357 | 3.1:+47572036 | None:intergenic |
| TTAACACAATCCGGTGCTGT+AGG | 0.592563 | 3.1:+47568962 | None:intergenic |
| AGTATAATTTGTTGATGATG+TGG | 0.593647 | 3.1:+47568340 | None:intergenic |
| AAGAGCAAAATGTGGTGTTG+GGG | 0.594584 | 3.1:-47571619 | MS.gene04541:CDS |
| ACAAAATCTTCCTACAGCAC+CGG | 0.597497 | 3.1:-47568972 | MS.gene04541:CDS |
| AAAATTCCATGATTCCAGCA+GGG | 0.599680 | 3.1:+47568218 | None:intergenic |
| GCCCGAAAAGTTACAACAGT+AGG | 0.614021 | 3.1:+47569822 | None:intergenic |
| GTGCAGAGTGTTAAATGACC+AGG | 0.620640 | 3.1:-47568188 | MS.gene04541:intron |
| AAATTCCATGATTCCAGCAG+GGG | 0.627294 | 3.1:+47568219 | None:intergenic |
| ACTTGGGTTACATAAAACCC+TGG | 0.627648 | 3.1:-47570487 | MS.gene04541:CDS |
| AGCATTGGAACTATGTGCCA+GGG | 0.629160 | 3.1:-47569523 | MS.gene04541:intron |
| GAGTTGCAGAGATGCAACGG+CGG | 0.629475 | 3.1:+47572034 | None:intergenic |
| CGAGTTATATAAATCTTATG+CGG | 0.630317 | 3.1:-47568266 | MS.gene04541:CDS |
| AAATCCAAATGGAACCCCAA+AGG | 0.642176 | 3.1:-47571931 | MS.gene04541:intron |
| TCCTCGATGAAACGTTTCCG+TGG | 0.643422 | 3.1:-47568313 | MS.gene04541:CDS |
| TCACGACACACCATCGTAGA+CGG | 0.644067 | 3.1:+47571644 | None:intergenic |
| TATGTGGCTGTCCTGGAACT+GGG | 0.647137 | 3.1:-47571550 | MS.gene04541:CDS |
| GTCTACAGCACCGTCTACGA+TGG | 0.655126 | 3.1:-47571654 | MS.gene04541:CDS |
| GGAGCAAATGAGGATTGTGA+AGG | 0.660637 | 3.1:-47571690 | MS.gene04541:CDS |
| AATTCCATGATTCCAGCAGG+GGG | 0.690738 | 3.1:+47568220 | None:intergenic |
| CAAAACATATAGATCACCAG+TGG | 0.695627 | 3.1:-47568383 | MS.gene04541:CDS |
| TCCACGGAAACGTTTCATCG+AGG | 0.729636 | 3.1:+47568312 | None:intergenic |
| GATTTGTCGAACGACTGATG+AGG | 0.730477 | 3.1:+47571999 | None:intergenic |
| TTGGGTTACATAAAACCCTG+GGG | 0.747246 | 3.1:-47570485 | MS.gene04541:CDS |
| TCGTGAGGAAGAGCAAAATG+TGG | 0.753694 | 3.1:-47571627 | MS.gene04541:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAGCTATTAATATAAAG+AGG | + | chr3.1:47570362-47570381 | None:intergenic | 15.0% |
| !! | ATATGTTTATTAAAACTTGT+GGG | - | chr3.1:47568702-47568721 | MS.gene04541:intron | 15.0% |
| !! | TAAAAAACAAGAATTTGATA+TGG | - | chr3.1:47571006-47571025 | MS.gene04541:intron | 15.0% |
| !! | TTCTGTATAATTAATGTTAT+AGG | - | chr3.1:47571387-47571406 | MS.gene04541:intron | 15.0% |
| !! | TTTCATTAAATTCTTCTAAA+AGG | + | chr3.1:47571277-47571296 | None:intergenic | 15.0% |
| !!! | GCAATGATATTTTTTTTAAT+AGG | + | chr3.1:47570264-47570283 | None:intergenic | 15.0% |
| !!! | TGTAATGATTTTTAAAAGAA+TGG | - | chr3.1:47568911-47568930 | MS.gene04541:intron | 15.0% |
| !!! | TTGTAATTGCATTTTATAAT+TGG | - | chr3.1:47568888-47568907 | MS.gene04541:intron | 15.0% |
| !!! | TTTTAATTGAATGATTGAAA+TGG | - | chr3.1:47568508-47568527 | MS.gene04541:intron | 15.0% |
| !! | ATAAAATGCAATTACAAAAG+AGG | + | chr3.1:47568885-47568904 | None:intergenic | 20.0% |
| !! | ATACATAAATTATTACTGCA+GGG | - | chr3.1:47571880-47571899 | MS.gene04541:intron | 20.0% |
| !! | ATTACATAAACAATGAGTAA+TGG | + | chr3.1:47569629-47569648 | None:intergenic | 20.0% |
| !! | CTTATTCAAAAAAACTTTAG+TGG | - | chr3.1:47571226-47571245 | MS.gene04541:intron | 20.0% |
| !! | GATATGTTTATTAAAACTTG+TGG | - | chr3.1:47568701-47568720 | MS.gene04541:intron | 20.0% |
| !! | GTATAGTGTTATAGATTTAA+AGG | - | chr3.1:47568584-47568603 | MS.gene04541:intron | 20.0% |
| !! | TAAAATGCAATTACAAAAGA+GGG | + | chr3.1:47568884-47568903 | None:intergenic | 20.0% |
| !! | TAATATATATTTCATGCTGA+AGG | + | chr3.1:47571321-47571340 | None:intergenic | 20.0% |
| !! | TACTCATTGTTTATGTAATT+TGG | - | chr3.1:47569630-47569649 | MS.gene04541:intron | 20.0% |
| !! | TATGTTTATTAAAACTTGTG+GGG | - | chr3.1:47568703-47568722 | MS.gene04541:intron | 20.0% |
| !! | TGAATTTGAACTTATAACAT+AGG | - | chr3.1:47570797-47570816 | MS.gene04541:intron | 20.0% |
| !!! | AAATGTTTTGAAGGATTTTA+CGG | - | chr3.1:47568779-47568798 | MS.gene04541:intron | 20.0% |
| !!! | AATGATTTTTAAAAGAATGG+AGG | - | chr3.1:47568914-47568933 | MS.gene04541:intron | 20.0% |
| !!! | AATGTAAGATTGTTGTTATA+CGG | - | chr3.1:47570192-47570211 | MS.gene04541:CDS | 20.0% |
| !!! | ATTTCATTTTCAACTCATTA+AGG | - | chr3.1:47570000-47570019 | MS.gene04541:intron | 20.0% |
| !!! | GTTAGAGCTTTAATATATAT+TGG | - | chr3.1:47571203-47571222 | MS.gene04541:intron | 20.0% |
| ! | AAACATATCAATTGCAAAAG+AGG | + | chr3.1:47568690-47568709 | None:intergenic | 25.0% |
| ! | AATACAAGCACAATAATCTA+AGG | + | chr3.1:47572042-47572061 | None:intergenic | 25.0% |
| ! | ACAATTTACGGATAAAACAT+CGG | + | chr3.1:47569300-47569319 | None:intergenic | 25.0% |
| ! | AGCAATATATCAAGATAAAG+TGG | + | chr3.1:47570223-47570242 | None:intergenic | 25.0% |
| ! | ATAAGTATACATCTGGAAAA+TGG | + | chr3.1:47569774-47569793 | None:intergenic | 25.0% |
| ! | ATACAAGCACAATAATCTAA+GGG | + | chr3.1:47572041-47572060 | None:intergenic | 25.0% |
| ! | ATATGAACAAATCAAATCCA+GGG | + | chr3.1:47569581-47569600 | None:intergenic | 25.0% |
| ! | CAGCATGAAATATATATTAC+TGG | - | chr3.1:47571322-47571341 | MS.gene04541:intron | 25.0% |
| ! | CGAGTTATATAAATCTTATG+CGG | - | chr3.1:47571682-47571701 | MS.gene04541:CDS | 25.0% |
| ! | GATACATAAATTATTACTGC+AGG | - | chr3.1:47571879-47571898 | MS.gene04541:intron | 25.0% |
| ! | GTAAAATTCAAATGATACAG+TGG | + | chr3.1:47572015-47572034 | None:intergenic | 25.0% |
| ! | GTTATAATGAGTTGTAATGT+AGG | - | chr3.1:47570306-47570325 | MS.gene04541:intron | 25.0% |
| ! | TAAGCAAATATAAACGTATC+TGG | + | chr3.1:47570469-47570488 | None:intergenic | 25.0% |
| ! | TATATGAACAAATCAAATCC+AGG | + | chr3.1:47569582-47569601 | None:intergenic | 25.0% |
| ! | TCCTTAAGATTATTCAAGAA+AGG | - | chr3.1:47570166-47570185 | MS.gene04541:intron | 25.0% |
| ! | TGCAAATGAAAATGTGTTAA+TGG | + | chr3.1:47569260-47569279 | None:intergenic | 25.0% |
| ! | TGTGTAAATCAGTGTTAATT+AGG | - | chr3.1:47568814-47568833 | MS.gene04541:intron | 25.0% |
| ! | TTAGATTATTGTGCTTGTAT+TGG | - | chr3.1:47572041-47572060 | MS.gene04541:CDS | 25.0% |
| ! | TTGATTCATTGTTAATAAGC+TGG | - | chr3.1:47571086-47571105 | MS.gene04541:intron | 25.0% |
| ! | TTGCTACTATGAAAATATCA+TGG | - | chr3.1:47570238-47570257 | MS.gene04541:CDS | 25.0% |
| ! | TTTACCTATAAGTATACATC+TGG | + | chr3.1:47569781-47569800 | None:intergenic | 25.0% |
| !! | ATATTACTGGTTGTCATAAA+AGG | - | chr3.1:47571335-47571354 | MS.gene04541:intron | 25.0% |
| !! | ATCCTAAGAATAACTTTTGT+GGG | - | chr3.1:47571136-47571155 | MS.gene04541:intron | 25.0% |
| !! | ATTAACACATTTTCATTTGC+AGG | - | chr3.1:47569259-47569278 | MS.gene04541:intron | 25.0% |
| !! | GTGTTAAGTTTATTGATTGA+TGG | - | chr3.1:47568727-47568746 | MS.gene04541:intron | 25.0% |
| !! | TACATCTGATATTTTCACAA+AGG | - | chr3.1:47569334-47569353 | MS.gene04541:intron | 25.0% |
| !! | TTAACACATTTTCATTTGCA+GGG | - | chr3.1:47569260-47569279 | MS.gene04541:intron | 25.0% |
| !! | TTTTCCAGATGTATACTTAT+AGG | - | chr3.1:47569774-47569793 | MS.gene04541:intron | 25.0% |
| !!! | AGTATAATTTGTTGATGATG+TGG | + | chr3.1:47571611-47571630 | None:intergenic | 25.0% |
| !!! | ATTGAAGTATTGAAGTATGT+GGG | - | chr3.1:47568998-47569017 | MS.gene04541:CDS | 25.0% |
| !!! | TATTGAAGTATTGAAGTATG+TGG | - | chr3.1:47568997-47569016 | MS.gene04541:CDS | 25.0% |
| !!! | TCTTGTTTTTTAACACAATC+CGG | + | chr3.1:47570998-47571017 | None:intergenic | 25.0% |
| AAGATTTATATAACTCGCCA+AGG | + | chr3.1:47571679-47571698 | None:intergenic | 30.0% | |
| AAGCATGTCAATCAAATCAA+CGG | + | chr3.1:47568978-47568997 | None:intergenic | 30.0% | |
| ATCCCACAAAAGTTATTCTT+AGG | + | chr3.1:47571141-47571160 | None:intergenic | 30.0% | |
| ATGAATGTGTTCTGTATTTC+AGG | - | chr3.1:47570873-47570892 | MS.gene04541:intron | 30.0% | |
| CAAATATTGCAACTTGCAAT+TGG | + | chr3.1:47570779-47570798 | None:intergenic | 30.0% | |
| CAATTTACGGATAAAACATC+GGG | + | chr3.1:47569299-47569318 | None:intergenic | 30.0% | |
| CATATCACATTGTTCTCTAT+TGG | + | chr3.1:47569125-47569144 | None:intergenic | 30.0% | |
| CTCTTCTCAATTTATCATCT+CGG | + | chr3.1:47571927-47571946 | None:intergenic | 30.0% | |
| CTTATTGTGCTTGTTTATAC+AGG | - | chr3.1:47569882-47569901 | MS.gene04541:intron | 30.0% | |
| GAAAGCGAATTTACTCAATT+GGG | - | chr3.1:47568444-47568463 | MS.gene04541:intron | 30.0% | |
| GAAGACAATTTCGAAAAAAG+CGG | + | chr3.1:47572121-47572140 | None:intergenic | 30.0% | |
| GAGTAATTAAAAAGAGAGCA+AGG | + | chr3.1:47570085-47570104 | None:intergenic | 30.0% | |
| GCAAACTGCTGAAATAAAAT+AGG | + | chr3.1:47571421-47571440 | None:intergenic | 30.0% | |
| GCCTTTCTTGAATAATCTTA+AGG | + | chr3.1:47570170-47570189 | None:intergenic | 30.0% | |
| GGAATGTATATATCCTTAAG+TGG | - | chr3.1:47571107-47571126 | MS.gene04541:intron | 30.0% | |
| TCAAACTGTATTACAGTCAA+GGG | + | chr3.1:47569845-47569864 | None:intergenic | 30.0% | |
| TCTTCTCAATTTATCATCTC+GGG | + | chr3.1:47571926-47571945 | None:intergenic | 30.0% | |
| TGAAAGCGAATTTACTCAAT+TGG | - | chr3.1:47568443-47568462 | MS.gene04541:intron | 30.0% | |
| TGACAGTGATGTACAATTTA+CGG | + | chr3.1:47569312-47569331 | None:intergenic | 30.0% | |
| TTAACAACACTTAGTTGACT+AGG | - | chr3.1:47569386-47569405 | MS.gene04541:CDS | 30.0% | |
| ! | ATATCACCTTCATCTAGTTT+AGG | + | chr3.1:47571955-47571974 | None:intergenic | 30.0% |
| ! | GATCCTAAGAATAACTTTTG+TGG | - | chr3.1:47571135-47571154 | MS.gene04541:intron | 30.0% |
| ! | GGTTGTCATAAAAGGTATAT+AGG | - | chr3.1:47571343-47571362 | MS.gene04541:intron | 30.0% |
| !! | CATTCAATTTTGAGGATCTT+AGG | + | chr3.1:47571510-47571529 | None:intergenic | 30.0% |
| !! | CGATTCGATTTGATTTTCAT+CGG | + | chr3.1:47567979-47567998 | None:intergenic | 30.0% |
| !! | CTCTAGTGAAAATGTTTTGA+AGG | - | chr3.1:47568770-47568789 | MS.gene04541:intron | 30.0% |
| !! | GTAGATGCACTGATTTATAA+TGG | + | chr3.1:47570639-47570658 | None:intergenic | 30.0% |
| !! | TGATATTACTTTTGCATTGC+AGG | - | chr3.1:47571969-47571988 | MS.gene04541:CDS | 30.0% |
| !!! | TGTTTTTTTTGTGTGTGATG+TGG | - | chr3.1:47568222-47568241 | MS.gene04541:CDS | 30.0% |
| AAAATTCCATGATTCCAGCA+GGG | + | chr3.1:47571733-47571752 | None:intergenic | 35.0% | |
| AACAATGAATCAACCATCGA+TGG | + | chr3.1:47571079-47571098 | None:intergenic | 35.0% | |
| AATTAAACGTGTCAACTCAG+TGG | + | chr3.1:47568188-47568207 | None:intergenic | 35.0% | |
| ACATCTGGAAAATGGAAAAG+TGG | + | chr3.1:47569766-47569785 | None:intergenic | 35.0% | |
| ACCTGAATGAATTTCATTGC+AGG | - | chr3.1:47572091-47572110 | MS.gene04541:CDS | 35.0% | |
| AGAAATTCATGACAGATACC+TGG | + | chr3.1:47571781-47571800 | None:intergenic | 35.0% | |
| AGATCCTCAAAATTGAATGC+AGG | - | chr3.1:47571511-47571530 | MS.gene04541:CDS | 35.0% | |
| ATAGTTCCAATGCTTGATGT+TGG | + | chr3.1:47570419-47570438 | None:intergenic | 35.0% | |
| ATGGCAATGTGAGTAACTAT+AGG | + | chr3.1:47571060-47571079 | None:intergenic | 35.0% | |
| CAAAACATATAGATCACCAG+TGG | - | chr3.1:47571565-47571584 | MS.gene04541:CDS | 35.0% | |
| CAATGTTATGGCAGATACTT+GGG | - | chr3.1:47569445-47569464 | MS.gene04541:intron | 35.0% | |
| CAATTTAATGCAGTAAGCCT+TGG | + | chr3.1:47569945-47569964 | None:intergenic | 35.0% | |
| CATTTGGATTTAAGTGATGC+AGG | + | chr3.1:47568008-47568027 | None:intergenic | 35.0% | |
| CCTGAATGAATTTCATTGCA+GGG | - | chr3.1:47572092-47572111 | MS.gene04541:CDS | 35.0% | |
| CTCAAAATTGAATGCAGGTA+AGG | - | chr3.1:47571516-47571535 | MS.gene04541:CDS | 35.0% | |
| CTCAAACTGTATTACAGTCA+AGG | + | chr3.1:47569846-47569865 | None:intergenic | 35.0% | |
| CTGCATCACTTAAATCCAAA+TGG | - | chr3.1:47568006-47568025 | MS.gene04541:CDS | 35.0% | |
| GAAATGCTCTTTGTATATGC+AGG | - | chr3.1:47570579-47570598 | MS.gene04541:intron | 35.0% | |
| GACTAATCCACTCAATGTTA+TGG | - | chr3.1:47569433-47569452 | MS.gene04541:intron | 35.0% | |
| GGGATTGTCCTAGTTTAATA+AGG | + | chr3.1:47571906-47571925 | None:intergenic | 35.0% | |
| GTGATGTGGAAATTGTAGAT+GGG | - | chr3.1:47568236-47568255 | MS.gene04541:CDS | 35.0% | |
| TAACATAGGTGTCTTGCATT+TGG | - | chr3.1:47570811-47570830 | MS.gene04541:intron | 35.0% | |
| TAAGAAACATATTCTTGCCC+TGG | - | chr3.1:47569561-47569580 | MS.gene04541:intron | 35.0% | |
| TATATTAGAGGGCTTTCTTG+AGG | - | chr3.1:47571832-47571851 | MS.gene04541:intron | 35.0% | |
| TCAATGTTATGGCAGATACT+TGG | - | chr3.1:47569444-47569463 | MS.gene04541:intron | 35.0% | |
| TCTTACATCATGTTCGATGT+AGG | + | chr3.1:47569546-47569565 | None:intergenic | 35.0% | |
| TGATGTGGAAATTGTAGATG+GGG | - | chr3.1:47568237-47568256 | MS.gene04541:CDS | 35.0% | |
| TGCTTGCAATTTGAATGCTT+TGG | - | chr3.1:47570934-47570953 | MS.gene04541:intron | 35.0% | |
| TGGTAAGCATGAAAAGATCA+TGG | + | chr3.1:47569746-47569765 | None:intergenic | 35.0% | |
| TGTGATGTGGAAATTGTAGA+TGG | - | chr3.1:47568235-47568254 | MS.gene04541:CDS | 35.0% | |
| TTAGGATCTTAGACCACTTA+AGG | + | chr3.1:47571123-47571142 | None:intergenic | 35.0% | |
| ! | AGCCTACTGTTGTAACTTTT+CGG | - | chr3.1:47570124-47570143 | MS.gene04541:intron | 35.0% |
| ! | CACTGGTGATCTATATGTTT+TGG | + | chr3.1:47571567-47571586 | None:intergenic | 35.0% |
| ! | CTTACCTGCATTCAATTTTG+AGG | + | chr3.1:47571518-47571537 | None:intergenic | 35.0% |
| ! | GAGGACAGCTTCATTTTATA+AGG | + | chr3.1:47570042-47570061 | None:intergenic | 35.0% |
| ! | TAAAGCTCTAACTAAGCACA+AGG | + | chr3.1:47571195-47571214 | None:intergenic | 35.0% |
| ! | TGTAGGAAGATTTTGTTCTG+AGG | + | chr3.1:47570972-47570991 | None:intergenic | 35.0% |
| !! | AAGTTCTGAAGTTGCTGTAA+GGG | + | chr3.1:47569507-47569526 | None:intergenic | 35.0% |
| !! | GTGGATTAGTCAACTAAGTA+AGG | + | chr3.1:47569424-47569443 | None:intergenic | 35.0% |
| AAATCCAAATGGAACCCCAA+AGG | - | chr3.1:47568017-47568036 | MS.gene04541:CDS | 40.0% | |
| AAATTCCATGATTCCAGCAG+GGG | + | chr3.1:47571732-47571751 | None:intergenic | 40.0% | |
| AACATATAGATCACCAGTGG+TGG | - | chr3.1:47571568-47571587 | MS.gene04541:CDS | 40.0% | |
| ACAAAATCTTCCTACAGCAC+CGG | - | chr3.1:47570976-47570995 | MS.gene04541:intron | 40.0% | |
| ACATAAAACCCTGGGGAAAA+AGG | - | chr3.1:47569470-47569489 | MS.gene04541:intron | 40.0% | |
| ACTGATGAGGTGACTGAATT+GGG | + | chr3.1:47567939-47567958 | None:intergenic | 40.0% | |
| ACTTGGGTTACATAAAACCC+TGG | - | chr3.1:47569461-47569480 | MS.gene04541:intron | 40.0% | |
| ATGATGTGGCAGAGATTGTA+TGG | + | chr3.1:47571597-47571616 | None:intergenic | 40.0% | |
| CAAATGATACAGTGGCTCAA+GGG | + | chr3.1:47572007-47572026 | None:intergenic | 40.0% | |
| CAATGTTGTTGTACTTACCC+TGG | + | chr3.1:47570445-47570464 | None:intergenic | 40.0% | |
| CATAAAACCCTGGGGAAAAA+GGG | - | chr3.1:47569471-47569490 | MS.gene04541:intron | 40.0% | |
| CCCTGCAATGAAATTCATTC+AGG | + | chr3.1:47572095-47572114 | None:intergenic | 40.0% | |
| CGTTTGGATGAAGCAATTGA+AGG | + | chr3.1:47567831-47567850 | None:intergenic | 40.0% | |
| CTTGGGTTACATAAAACCCT+GGG | - | chr3.1:47569462-47569481 | MS.gene04541:intron | 40.0% | |
| CTTTATATATGTGGCTGTCC+TGG | - | chr3.1:47568391-47568410 | MS.gene04541:CDS | 40.0% | |
| GAAAATTCCATGATTCCAGC+AGG | + | chr3.1:47571734-47571753 | None:intergenic | 40.0% | |
| GAAGAGCAAAATGTGGTGTT+GGG | - | chr3.1:47568328-47568347 | MS.gene04541:CDS | 40.0% | |
| GATTGATGCATTCATGTCGA+TGG | - | chr3.1:47569037-47569056 | MS.gene04541:CDS | 40.0% | |
| GCAGGTAAGGATTGATCATA+TGG | - | chr3.1:47571529-47571548 | MS.gene04541:CDS | 40.0% | |
| GCTGGGAGTCTTTATATATG+TGG | - | chr3.1:47568382-47568401 | MS.gene04541:CDS | 40.0% | |
| GGTCTAAGTTTCAACTCAGT+TGG | - | chr3.1:47571247-47571266 | MS.gene04541:intron | 40.0% | |
| GTATCTGCCATAACATTGAG+TGG | + | chr3.1:47569443-47569462 | None:intergenic | 40.0% | |
| GTGACACCTAAACTAGATGA+AGG | - | chr3.1:47571946-47571965 | MS.gene04541:CDS | 40.0% | |
| GTGTTGAGCATGAAAAAGCT+GGG | - | chr3.1:47568365-47568384 | MS.gene04541:CDS | 40.0% | |
| TAAAAGAATGGAGGACTCGT+TGG | - | chr3.1:47568923-47568942 | MS.gene04541:intron | 40.0% | |
| TCAAATGATACAGTGGCTCA+AGG | + | chr3.1:47572008-47572027 | None:intergenic | 40.0% | |
| TGAGGATCTTAGGCTACAAA+CGG | + | chr3.1:47571500-47571519 | None:intergenic | 40.0% | |
| TGATGTTGGAAGACGATGTA+AGG | + | chr3.1:47570405-47570424 | None:intergenic | 40.0% | |
| TGGATTTAAGTGATGCAGGT+TGG | + | chr3.1:47568004-47568023 | None:intergenic | 40.0% | |
| TGTGTTGAGCATGAAAAAGC+TGG | - | chr3.1:47568364-47568383 | MS.gene04541:CDS | 40.0% | |
| TTACTCCGTTTATCCGTTTC+AGG | - | chr3.1:47570099-47570118 | MS.gene04541:intron | 40.0% | |
| TTGGGTTACATAAAACCCTG+GGG | - | chr3.1:47569463-47569482 | MS.gene04541:intron | 40.0% | |
| ! | AAGAGCAAAATGTGGTGTTG+GGG | - | chr3.1:47568329-47568348 | MS.gene04541:CDS | 40.0% |
| ! | ACACATTTTCATTTGCAGGG+AGG | - | chr3.1:47569263-47569282 | MS.gene04541:intron | 40.0% |
| ! | ACTGACTGACTTTACCTTTG+GGG | + | chr3.1:47568034-47568053 | None:intergenic | 40.0% |
| ! | GACTGACTGACTTTACCTTT+GGG | + | chr3.1:47568035-47568054 | None:intergenic | 40.0% |
| ! | GCCTACTGTTGTAACTTTTC+GGG | - | chr3.1:47570125-47570144 | MS.gene04541:intron | 40.0% |
| ! | TAGCTGATCGATTTCTTCCA+AGG | - | chr3.1:47569925-47569944 | MS.gene04541:intron | 40.0% |
| ! | TGACTGACTGACTTTACCTT+TGG | + | chr3.1:47568036-47568055 | None:intergenic | 40.0% |
| ! | TTACAGTCAAGGGTATGACA+AGG | + | chr3.1:47569835-47569854 | None:intergenic | 40.0% |
| !! | AGCTATTTTGTCTCACCATC+AGG | - | chr3.1:47570374-47570393 | MS.gene04541:intron | 40.0% |
| !! | CAAGTTCTGAAGTTGCTGTA+AGG | + | chr3.1:47569508-47569527 | None:intergenic | 40.0% |
| !! | GAGTAATGGACAATCATACG+TGG | + | chr3.1:47569615-47569634 | None:intergenic | 40.0% |
| !! | TTTACCTTTGGGGTTCCATT+TGG | + | chr3.1:47568024-47568043 | None:intergenic | 40.0% |
| AACAGTAGGCTTGCCTGAAA+CGG | + | chr3.1:47570115-47570134 | None:intergenic | 45.0% | |
| AACTAAGCACAAGGTGTGCA+AGG | + | chr3.1:47571186-47571205 | None:intergenic | 45.0% | |
| AACTGGGAAATCGTTGTCGA+TGG | - | chr3.1:47568414-47568433 | MS.gene04541:CDS | 45.0% | |
| AATTCCATGATTCCAGCAGG+GGG | + | chr3.1:47571731-47571750 | None:intergenic | 45.0% | |
| ACTAAGCACAAGGTGTGCAA+GGG | + | chr3.1:47571185-47571204 | None:intergenic | 45.0% | |
| CCAGTCATGTACACAAGTAG+AGG | + | chr3.1:47570061-47570080 | None:intergenic | 45.0% | |
| CCTCTACTTGTGTACATGAC+TGG | - | chr3.1:47570058-47570077 | MS.gene04541:intron | 45.0% | |
| CGATGTAAGGAAGTTCCTGA+TGG | + | chr3.1:47570392-47570411 | None:intergenic | 45.0% | |
| CGTCTTCCAACATCAAGCAT+TGG | - | chr3.1:47570410-47570429 | MS.gene04541:intron | 45.0% | |
| GACTGATGAGGTGACTGAAT+TGG | + | chr3.1:47567940-47567959 | None:intergenic | 45.0% | |
| GAGGATCTTAGGCTACAAAC+GGG | + | chr3.1:47571499-47571518 | None:intergenic | 45.0% | |
| GATTGTATGGTATCCACCAC+TGG | + | chr3.1:47571584-47571603 | None:intergenic | 45.0% | |
| GATTTGTCGAACGACTGATG+AGG | + | chr3.1:47567952-47567971 | None:intergenic | 45.0% | |
| GCAAATGAGGATTGTGAAGG+AGG | - | chr3.1:47568261-47568280 | MS.gene04541:CDS | 45.0% | |
| GCCAAGAAAGACTCAATCCT+TGG | - | chr3.1:47571659-47571678 | MS.gene04541:CDS | 45.0% | |
| GCCAAGGATTGAGTCTTTCT+TGG | + | chr3.1:47571663-47571682 | None:intergenic | 45.0% | |
| GCCCGAAAAGTTACAACAGT+AGG | + | chr3.1:47570129-47570148 | None:intergenic | 45.0% | |
| GCTTGCCTGAAACGGATAAA+CGG | + | chr3.1:47570107-47570126 | None:intergenic | 45.0% | |
| GGAAGAGCAAAATGTGGTGT+TGG | - | chr3.1:47568327-47568346 | MS.gene04541:CDS | 45.0% | |
| GGAGCAAATGAGGATTGTGA+AGG | - | chr3.1:47568258-47568277 | MS.gene04541:CDS | 45.0% | |
| GTTACTCACATTGCCATCGA+TGG | - | chr3.1:47571063-47571082 | MS.gene04541:intron | 45.0% | |
| TACAAACGGGAGAGGATTAC+AGG | + | chr3.1:47571486-47571505 | None:intergenic | 45.0% | |
| TCGTGAGGAAGAGCAAAATG+TGG | - | chr3.1:47568321-47568340 | MS.gene04541:CDS | 45.0% | |
| TGCAAGGGAAGAGAAAGGAA+AGG | + | chr3.1:47571170-47571189 | None:intergenic | 45.0% | |
| TTGAGTCTTTCTTGGCTCCA+CGG | + | chr3.1:47571655-47571674 | None:intergenic | 45.0% | |
| TTGTAGATGGGGAGCAAATG+AGG | - | chr3.1:47568248-47568267 | MS.gene04541:CDS | 45.0% | |
| TTTACTCAATTGGGCTGCAG+AGG | - | chr3.1:47568453-47568472 | MS.gene04541:intron | 45.0% | |
| ! | AGCATTGGAACTATGTGCCA+GGG | - | chr3.1:47570425-47570444 | MS.gene04541:CDS | 45.0% |
| ! | GTGCAGAGTGTTAAATGACC+AGG | - | chr3.1:47571760-47571779 | MS.gene04541:intron | 45.0% |
| !! | AAGCATTGGAACTATGTGCC+AGG | - | chr3.1:47570424-47570443 | MS.gene04541:CDS | 45.0% |
| !! | CTGCAGGGCCTTATTAAACT+AGG | - | chr3.1:47571895-47571914 | MS.gene04541:intron | 45.0% |
| !! | GTGGTGTTGGGGTTTTGTAA+AGG | - | chr3.1:47568340-47568359 | MS.gene04541:CDS | 45.0% |
| !! | TTAACACAATCCGGTGCTGT+AGG | + | chr3.1:47570989-47571008 | None:intergenic | 45.0% |
| !! | TAAAATAAAAGAAAAAATTA+TGG | + | chr3.1:47570754-47570773 | None:intergenic | 5.0% |
| AATTCCCCCTGCTGGAATCA+TGG | - | chr3.1:47571724-47571743 | MS.gene04541:intron | 50.0% | |
| ACGGATAAAACATCGGGCAG+CGG | + | chr3.1:47569293-47569312 | None:intergenic | 50.0% | |
| AGGGCTTTCTTGAGGCAAAG+TGG | - | chr3.1:47571840-47571859 | MS.gene04541:intron | 50.0% | |
| AGGTGTGCAAGGGAAGAGAA+AGG | + | chr3.1:47571175-47571194 | None:intergenic | 50.0% | |
| ATATGTGGCTGTCCTGGAAC+TGG | - | chr3.1:47568397-47568416 | MS.gene04541:CDS | 50.0% | |
| ATGGAGCACAGCTCTGTCTT+TGG | + | chr3.1:47569727-47569746 | None:intergenic | 50.0% | |
| CAGAAAGTTGCTGCAGCTTC+TGG | - | chr3.1:47570548-47570567 | MS.gene04541:intron | 50.0% | |
| GACAACGATTTCCCAGTTCC+AGG | + | chr3.1:47568412-47568431 | None:intergenic | 50.0% | |
| GGGAGATCTGAATCTGCGTT+TGG | + | chr3.1:47567847-47567866 | None:intergenic | 50.0% | |
| TATGTGGCTGTCCTGGAACT+GGG | - | chr3.1:47568398-47568417 | MS.gene04541:CDS | 50.0% | |
| TCACGACACACCATCGTAGA+CGG | + | chr3.1:47568307-47568326 | None:intergenic | 50.0% | |
| TCATCACTAATTCCCCCTGC+TGG | - | chr3.1:47571716-47571735 | MS.gene04541:intron | 50.0% | |
| TCCACGGAAACGTTTCATCG+AGG | + | chr3.1:47571639-47571658 | None:intergenic | 50.0% | |
| TCCTCGATGAAACGTTTCCG+TGG | - | chr3.1:47571635-47571654 | MS.gene04541:CDS | 50.0% | |
| TCTTAGGCTACAAACGGGAG+AGG | + | chr3.1:47571494-47571513 | None:intergenic | 50.0% | |
| TGGGAGTTGCAGAGATGCAA+CGG | + | chr3.1:47567920-47567939 | None:intergenic | 50.0% | |
| ACCCTGGGGAAAAAGGGTTC+AGG | - | chr3.1:47569477-47569496 | MS.gene04541:intron | 55.0% | |
| AGGAGAAGTGGTGGTTGGGA+TGG | + | chr3.1:47567877-47567896 | None:intergenic | 55.0% | |
| AGTTGCAGAGATGCAACGGC+GGG | + | chr3.1:47567916-47567935 | None:intergenic | 55.0% | |
| GAGTTGCAGAGATGCAACGG+CGG | + | chr3.1:47567917-47567936 | None:intergenic | 55.0% | |
| GGAGAAGTGGTGGTTGGGAT+GGG | + | chr3.1:47567876-47567895 | None:intergenic | 55.0% | |
| GTCTACAGCACCGTCTACGA+TGG | - | chr3.1:47568294-47568313 | MS.gene04541:CDS | 55.0% | |
| GTCTACGATGGTGTGTCGTG+AGG | - | chr3.1:47568306-47568325 | MS.gene04541:CDS | 55.0% | |
| TGGGAGGAGAAGTGGTGGTT+GGG | + | chr3.1:47567881-47567900 | None:intergenic | 55.0% | |
| ! | GCCTGAACCCTTTTTCCCCA+GGG | + | chr3.1:47569481-47569500 | None:intergenic | 55.0% |
| ! | TGCCTGAACCCTTTTTCCCC+AGG | + | chr3.1:47569482-47569501 | None:intergenic | 55.0% |
| AGTGGTGGTTGGGATGGGTG+TGG | + | chr3.1:47567871-47567890 | None:intergenic | 60.0% | |
| GTGGGAGGAGAAGTGGTGGT+TGG | + | chr3.1:47567882-47567901 | None:intergenic | 60.0% | |
| GTTGCAGAGATGCAACGGCG+GGG | + | chr3.1:47567915-47567934 | None:intergenic | 60.0% | |
| TTGCAGAGATGCAACGGCGG+GGG | + | chr3.1:47567914-47567933 | None:intergenic | 60.0% | |
| TTTGCGGGTGGGAGGAGAAG+TGG | + | chr3.1:47567889-47567908 | None:intergenic | 60.0% | |
| GGTGGTTGGGATGGGTGTGG+CGG | + | chr3.1:47567868-47567887 | None:intergenic | 65.0% | |
| GTGGTTGGGATGGGTGTGGC+GGG | + | chr3.1:47567867-47567886 | None:intergenic | 65.0% | |
| TGCAACGGCGGGGGGATTTG+CGG | + | chr3.1:47567905-47567924 | None:intergenic | 65.0% | |
| TGCAGAGATGCAACGGCGGG+GGG | + | chr3.1:47567913-47567932 | None:intergenic | 65.0% | |
| GCAACGGCGGGGGGATTTGC+GGG | + | chr3.1:47567904-47567923 | None:intergenic | 70.0% | |
| GCGGGTGGGAGGAGAAGTGG+TGG | + | chr3.1:47567886-47567905 | None:intergenic | 70.0% | |
| ACGGCGGGGGGATTTGCGGG+TGG | + | chr3.1:47567901-47567920 | None:intergenic | 75.0% | |
| CGGCGGGGGGATTTGCGGGT+GGG | + | chr3.1:47567900-47567919 | None:intergenic | 75.0% | |
| CGGGGGGATTTGCGGGTGGG+AGG | + | chr3.1:47567897-47567916 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 47567825 | 47572145 | 47567825 | ID=MS.gene04541 |
| chr3.1 | mRNA | 47567825 | 47572145 | 47567825 | ID=MS.gene04541.t1;Parent=MS.gene04541 |
| chr3.1 | exon | 47571932 | 47572145 | 47571932 | ID=MS.gene04541.t1.exon1;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47571932 | 47572145 | 47571932 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47571496 | 47571716 | 47571496 | ID=MS.gene04541.t1.exon2;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47571496 | 47571716 | 47571496 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47570615 | 47570689 | 47570615 | ID=MS.gene04541.t1.exon3;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47570615 | 47570689 | 47570615 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47570411 | 47570511 | 47570411 | ID=MS.gene04541.t1.exon4;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47570411 | 47570511 | 47570411 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47570175 | 47570281 | 47570175 | ID=MS.gene04541.t1.exon5;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47570175 | 47570281 | 47570175 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47570007 | 47570066 | 47570007 | ID=MS.gene04541.t1.exon6;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47570007 | 47570066 | 47570007 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47569776 | 47569849 | 47569776 | ID=MS.gene04541.t1.exon7;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47569776 | 47569849 | 47569776 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47569524 | 47569574 | 47569524 | ID=MS.gene04541.t1.exon8;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47569524 | 47569574 | 47569524 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47569370 | 47569419 | 47569370 | ID=MS.gene04541.t1.exon9;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47569370 | 47569419 | 47569370 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47568943 | 47569075 | 47568943 | ID=MS.gene04541.t1.exon10;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47568943 | 47569075 | 47568943 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47568189 | 47568437 | 47568189 | ID=MS.gene04541.t1.exon11;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47568189 | 47568437 | 47568189 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47567980 | 47568069 | 47567980 | ID=MS.gene04541.t1.exon12;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47567980 | 47568069 | 47567980 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| chr3.1 | exon | 47567825 | 47567857 | 47567825 | ID=MS.gene04541.t1.exon13;Parent=MS.gene04541.t1 |
| chr3.1 | CDS | 47567825 | 47567857 | 47567825 | ID=cds.MS.gene04541.t1;Parent=MS.gene04541.t1 |
| Gene Sequence |
| Protein sequence |
