AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene37750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37750.t1 MTR_6g078450 83.784 518 83 1 1 517 1 518 0.0 924
MS.gene37750.t1 MTR_6g078380 85.249 522 75 2 1 520 1 522 0.0 920
MS.gene37750.t1 MTR_6g078330 74.952 519 129 1 3 520 4 522 0.0 833
MS.gene37750.t1 MTR_6g078450 84.902 457 68 1 1 456 1 457 0.0 825
MS.gene37750.t1 MTR_4g066580 67.899 514 160 2 4 513 5 517 0.0 742
MS.gene37750.t1 MTR_3g028720 66.474 519 165 4 1 513 1 516 0.0 736
MS.gene37750.t1 MTR_2g098520 70.539 482 141 1 30 511 30 510 0.0 735
MS.gene37750.t1 MTR_2g098790 66.926 514 165 3 1 510 1 513 0.0 733
MS.gene37750.t1 MTR_2g098540 68.102 511 159 2 1 511 1 507 0.0 733
MS.gene37750.t1 MTR_4g066240 65.748 508 172 1 3 510 6 511 0.0 721
MS.gene37750.t1 MTR_4g066590 65.878 507 168 1 3 509 6 507 0.0 718
MS.gene37750.t1 MTR_4g066240 65.619 509 172 2 3 510 6 512 0.0 717
MS.gene37750.t1 MTR_4g066210 68.487 476 150 0 35 510 43 518 0.0 711
MS.gene37750.t1 MTR_4g066630 68.277 476 151 0 34 509 38 513 0.0 709
MS.gene37750.t1 MTR_2g098540 70.087 458 137 0 54 511 6 463 0.0 695
MS.gene37750.t1 MTR_6g078330 76.555 418 98 0 103 520 1 418 0.0 692
MS.gene37750.t1 MTR_5g071520 65.076 524 170 2 1 511 1 524 0.0 684
MS.gene37750.t1 MTR_4g066640 61.644 511 192 2 2 511 6 513 0.0 678
MS.gene37750.t1 MTR_4g066330 61.923 520 164 6 1 512 1 494 0.0 660
MS.gene37750.t1 MTR_6g078330 74.384 406 102 1 115 520 15 418 0.0 652
MS.gene37750.t1 MTR_3g028720 66.450 462 146 4 1 456 1 459 0.0 652
MS.gene37750.t1 MTR_4g066340 68.750 432 135 0 79 510 7 438 0.0 641
MS.gene37750.t1 MTR_4g066280 60.359 502 170 4 12 510 17 492 0.0 637
MS.gene37750.t1 MTR_3g026280 62.500 480 175 2 32 511 19 493 0.0 632
MS.gene37750.t1 MTR_4g066630 68.483 422 133 0 34 455 38 459 0.0 631
MS.gene37750.t1 MTR_4g066580 68.706 425 128 2 4 424 5 428 0.0 615
MS.gene37750.t1 MTR_4g023000 58.907 494 197 3 17 510 6 493 0.0 615
MS.gene37750.t1 MTR_6g078330 75.936 374 89 1 3 375 4 377 0.0 610
MS.gene37750.t1 MTR_3g028720 67.606 426 129 4 1 420 1 423 0.0 608
MS.gene37750.t1 MTR_4g066630 70.284 387 115 0 34 420 38 424 0.0 593
MS.gene37750.t1 MTR_4g066240 65.072 418 144 1 3 420 6 421 0.0 585
MS.gene37750.t1 MTR_4g067040 70.133 375 112 0 34 408 33 407 0.0 571
MS.gene37750.t1 MTR_4g083000 54.059 505 225 4 8 510 3 502 0.0 567
MS.gene37750.t1 MTR_3g026400 55.975 477 204 4 34 509 36 507 0.0 566
MS.gene37750.t1 MTR_4g015420 56.400 500 178 7 23 510 53 524 0.0 565
MS.gene37750.t1 MTR_3g028720 67.352 389 118 4 1 383 1 386 0.0 556
MS.gene37750.t1 MTR_2g043200 57.023 477 171 5 40 510 70 518 0.0 551
MS.gene37750.t1 MTR_4g067040 72.000 350 98 0 34 383 33 382 0.0 548
MS.gene37750.t1 MTR_3g026620 53.045 509 228 4 8 509 4 508 0.0 541
MS.gene37750.t1 MTR_3g026400 55.246 467 201 5 44 509 17 476 0.0 541
MS.gene37750.t1 MTR_4g015460 54.365 504 191 8 22 514 29 504 0.0 534
MS.gene37750.t1 MTR_4g066630 71.137 343 99 0 34 376 38 380 0.0 533
MS.gene37750.t1 MTR_5g044000 51.243 523 225 7 14 509 1 520 0.0 532
MS.gene37750.t1 MTR_4g081530 51.485 505 237 5 12 513 3 502 0.0 519
MS.gene37750.t1 MTR_4g066640 60.982 387 147 2 2 387 6 389 1.94e-177 504
MS.gene37750.t1 MTR_0110s0040 49.507 507 245 6 6 512 18 513 2.53e-175 504
MS.gene37750.t1 MTR_0110s0030 48.805 502 249 6 11 512 20 513 2.16e-172 496
MS.gene37750.t1 MTR_3g033790 49.378 482 230 5 32 513 16 483 1.22e-168 486
MS.gene37750.t1 MTR_3g033810 50.000 478 226 4 33 510 19 483 1.36e-167 483
MS.gene37750.t1 MTR_4g131810 49.049 473 236 4 40 509 33 503 5.23e-166 480
MS.gene37750.t1 MTR_2g079580 46.939 490 249 6 28 513 25 507 6.62e-161 468
MS.gene37750.t1 MTR_4g083000 54.146 410 184 2 103 510 1 408 5.62e-160 461
MS.gene37750.t1 MTR_2g079550 47.531 486 244 6 28 509 23 501 1.37e-159 464
MS.gene37750.t1 MTR_2g022760 46.457 508 262 7 11 513 12 514 1.61e-159 464
MS.gene37750.t1 MTR_4g131800 47.817 504 254 9 14 513 495 993 5.16e-155 469
MS.gene37750.t1 MTR_7g068910 44.574 516 266 9 1 514 1 498 9.92e-151 441
MS.gene37750.t1 MTR_2g022710 43.487 522 280 8 1 515 1 514 7.08e-150 439
MS.gene37750.t1 MTR_4g016920 45.248 484 247 7 34 514 26 494 6.06e-148 434
MS.gene37750.t1 MTR_7g068910 43.893 524 264 10 1 512 1 506 1.77e-147 433
MS.gene37750.t1 MTR_7g033860 44.444 477 246 7 37 509 50 511 8.36e-142 418
MS.gene37750.t1 MTR_5g068740 43.504 508 257 10 8 510 7 489 1.39e-141 418
MS.gene37750.t1 MTR_3g026400 59.561 319 126 2 34 352 36 351 4.27e-141 411
MS.gene37750.t1 MTR_1g088610 43.444 511 252 10 8 510 7 488 1.30e-140 420
MS.gene37750.t1 MTR_1g088610 35.417 144 70 3 384 510 476 613 8.85e-21 96.3
MS.gene37750.t1 MTR_0108s0030 42.706 473 242 4 37 509 5 448 3.95e-138 407
MS.gene37750.t1 MTR_2g079580 48.363 397 195 5 28 420 25 415 1.59e-132 391
MS.gene37750.t1 MTR_7g051610 43.305 478 249 8 36 511 76 533 3.97e-129 387
MS.gene37750.t1 MTR_7g051510 44.142 478 241 10 36 509 76 531 2.36e-128 385
MS.gene37750.t1 MTR_2g022760 45.913 416 215 7 103 513 1 411 1.52e-127 379
MS.gene37750.t1 MTR_2g022710 42.641 462 252 6 1 456 1 455 9.35e-126 376
MS.gene37750.t1 MTR_2g022710 42.641 462 252 6 1 456 1 455 2.19e-125 375
MS.gene37750.t1 MTR_0110s0040 49.721 358 175 4 11 368 20 372 2.23e-124 370
MS.gene37750.t1 MTR_7g051650 42.236 483 254 7 36 514 76 537 1.48e-123 372
MS.gene37750.t1 MTR_7g051650 41.822 483 252 7 36 514 76 533 3.11e-122 369
MS.gene37750.t1 MTR_1g088630 42.366 465 214 10 54 510 14 432 2.44e-121 364
MS.gene37750.t1 MTR_2g022710 43.897 426 226 6 1 420 1 419 2.72e-121 362
MS.gene37750.t1 MTR_2g022710 43.029 416 231 5 103 515 1 413 8.49e-121 361
MS.gene37750.t1 MTR_4g016920 43.373 415 218 6 103 514 1 401 1.24e-119 358
MS.gene37750.t1 MTR_7g068900 44.048 420 219 5 98 514 17 423 1.91e-119 360
MS.gene37750.t1 MTR_2g022710 43.382 408 226 4 1 406 1 405 1.84e-115 347
MS.gene37750.t1 MTR_2g022710 44.473 389 203 6 1 383 1 382 1.60e-108 330
MS.gene37750.t1 MTR_7g056747 40.573 419 223 4 97 514 9 402 7.68e-104 317
MS.gene37750.t1 MTR_1g088630 46.018 339 152 6 37 373 29 338 3.80e-99 304
MS.gene37750.t1 MTR_4g016920 49.817 273 134 2 103 374 1 271 4.06e-93 286
MS.gene37750.t1 MTR_1g088630 51.504 266 123 3 37 301 29 289 9.88e-91 280
MS.gene37750.t1 MTR_0110s0020 52.282 241 111 3 35 275 43 279 7.54e-87 270
MS.gene37750.t1 MTR_5g069350 45.506 178 44 5 349 510 48 188 2.45e-34 128
MS.gene37750.t1 MTR_4g122980 26.230 427 240 14 99 518 183 541 2.45e-27 116
MS.gene37750.t1 MTR_8g038650 41.525 118 59 1 249 356 35 152 1.73e-23 97.4
MS.gene37750.t1 MTR_8g038650 57.407 54 22 1 44 97 7 59 4.90e-13 67.4
MS.gene37750.t1 MTR_6g078770 52.500 80 21 1 1 80 1 63 3.39e-15 77.0
MS.gene37750.t1 MTR_6g078770 52.500 80 21 1 1 80 1 63 4.52e-15 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene37750.t1 AT2G44480 55.943 488 214 1 31 518 31 517 0.0 580
MS.gene37750.t1 AT2G44480 55.943 488 214 1 31 518 62 548 0.0 580
MS.gene37750.t1 AT5G42260 54.563 504 221 4 3 505 1 497 0.0 578
MS.gene37750.t1 AT5G44640 54.435 496 213 4 25 512 14 504 0.0 578
MS.gene37750.t1 AT2G44450 55.165 484 212 2 29 512 25 503 0.0 577
MS.gene37750.t1 AT3G60130 55.556 477 206 3 35 510 30 501 0.0 554
MS.gene37750.t1 AT1G26560 53.527 482 218 4 31 509 28 506 0.0 540
MS.gene37750.t1 AT5G54570 52.990 485 215 4 32 509 27 505 0.0 532
MS.gene37750.t1 AT2G25630 51.093 503 216 5 18 512 6 486 0.0 531
MS.gene37750.t1 AT3G60140 49.600 500 245 6 26 520 16 513 4.34e-180 518
MS.gene37750.t1 AT5G24550 50.312 481 234 4 35 511 32 511 1.29e-179 516
MS.gene37750.t1 AT1G47600 52.183 481 218 5 30 509 40 509 1.86e-179 514
MS.gene37750.t1 AT1G51470 52.391 481 217 5 30 509 40 509 5.22e-179 513
MS.gene37750.t1 AT1G47600 51.767 481 219 5 30 509 40 508 2.15e-178 511
MS.gene37750.t1 AT3G18080 52.301 478 220 6 35 511 39 509 2.37e-173 499
MS.gene37750.t1 AT2G44460 50.518 483 230 7 32 509 26 504 7.59e-173 500
MS.gene37750.t1 AT3G60120 50.207 482 233 6 34 511 13 491 1.01e-172 498
MS.gene37750.t1 AT5G24540 50.415 482 232 5 35 511 32 511 1.29e-171 495
MS.gene37750.t1 AT3G18070 50.304 493 221 10 22 511 21 492 1.44e-171 494
MS.gene37750.t1 AT3G18070 50.304 493 227 10 22 511 21 498 7.93e-171 492
MS.gene37750.t1 AT2G44470 46.964 494 254 6 32 520 26 516 5.90e-169 491
MS.gene37750.t1 AT2G44480 54.087 416 190 1 103 518 1 415 7.44e-169 484
MS.gene37750.t1 AT5G25980 47.318 522 263 10 1 518 17 530 2.93e-166 482
MS.gene37750.t1 AT3G60130 54.940 415 181 3 97 510 40 449 1.57e-165 477
MS.gene37750.t1 AT2G44490 47.619 483 245 6 34 510 13 493 1.60e-165 481
MS.gene37750.t1 AT5G36890 48.765 486 236 4 26 510 7 480 3.69e-165 477
MS.gene37750.t1 AT5G36890 48.765 486 236 4 26 510 7 480 6.33e-165 476
MS.gene37750.t1 AT5G26000 47.338 526 259 10 1 519 4 518 3.92e-161 469
MS.gene37750.t1 AT5G54570 51.740 431 196 3 32 456 27 451 6.97e-160 462
MS.gene37750.t1 AT3G03640 44.278 533 279 8 1 520 1 528 1.10e-158 462
MS.gene37750.t1 AT3G21370 46.296 486 251 7 32 510 30 512 1.91e-158 461
MS.gene37750.t1 AT1G61820 47.510 482 245 6 34 511 29 506 6.85e-158 459
MS.gene37750.t1 AT2G32860 46.266 482 255 4 34 512 93 573 9.74e-157 460
MS.gene37750.t1 AT3G09260 46.074 484 254 6 32 511 32 512 1.40e-156 456
MS.gene37750.t1 AT3G60130 53.012 415 178 4 97 510 40 438 3.14e-156 453
MS.gene37750.t1 AT2G32860 45.851 482 258 3 34 512 93 574 3.17e-156 459
MS.gene37750.t1 AT1G75940 46.016 502 257 8 19 510 21 518 1.32e-155 454
MS.gene37750.t1 AT5G28510 44.402 518 272 9 1 509 9 519 1.96e-155 454
MS.gene37750.t1 AT4G27830 45.382 498 253 6 15 509 3 484 1.85e-152 446
MS.gene37750.t1 AT4G21760 46.170 483 246 8 40 518 59 531 2.10e-151 444
MS.gene37750.t1 AT5G54570 51.691 414 187 4 103 509 1 408 4.40e-151 439
MS.gene37750.t1 AT1G52400 45.603 489 250 10 31 510 35 516 1.11e-150 442
MS.gene37750.t1 AT1G52400 45.603 489 250 10 31 510 35 516 1.11e-150 442
MS.gene37750.t1 AT1G66280 45.174 518 267 9 1 509 1 510 1.73e-150 441
MS.gene37750.t1 AT1G61810 44.158 505 274 6 11 511 9 509 9.83e-150 439
MS.gene37750.t1 AT1G02850 45.912 477 239 6 36 510 27 486 1.12e-148 435
MS.gene37750.t1 AT5G25980 47.162 458 233 7 1 456 17 467 7.44e-147 430
MS.gene37750.t1 AT5G25980 47.162 458 233 7 1 456 17 467 7.44e-147 430
MS.gene37750.t1 AT4G27820 45.530 481 241 6 32 509 20 482 6.69e-146 429
MS.gene37750.t1 AT1G66270 45.963 483 251 7 32 509 33 510 1.04e-145 429
MS.gene37750.t1 AT5G24540 49.176 425 210 4 35 455 32 454 8.99e-145 424
MS.gene37750.t1 AT4G21760 45.342 483 240 9 40 518 59 521 1.76e-144 426
MS.gene37750.t1 AT1G61810 44.286 490 265 6 11 496 9 494 4.34e-144 425
MS.gene37750.t1 AT1G02850 44.000 500 238 7 36 510 27 509 5.12e-144 424
MS.gene37750.t1 AT5G26000 47.289 461 230 7 1 456 4 456 3.07e-143 420
MS.gene37750.t1 AT1G02850 44.112 501 237 8 36 510 27 510 1.40e-142 421
MS.gene37750.t1 AT1G66270 45.756 483 250 8 32 509 33 508 2.15e-142 420
MS.gene37750.t1 AT3G60140 49.153 413 202 6 26 434 16 424 3.07e-142 417
MS.gene37750.t1 AT2G44470 46.262 428 223 5 32 455 26 450 1.41e-141 416
MS.gene37750.t1 AT2G44450 52.941 357 163 2 156 512 1 352 3.32e-140 409
MS.gene37750.t1 AT3G62750 43.000 500 250 9 15 509 4 473 1.15e-139 412
MS.gene37750.t1 AT3G62750 43.000 500 250 9 15 509 30 499 3.17e-139 412
MS.gene37750.t1 AT2G44480 60.000 315 124 2 31 345 62 374 3.63e-139 407
MS.gene37750.t1 AT1G60090 42.231 502 271 8 14 514 4 487 2.46e-138 409
MS.gene37750.t1 AT1G02850 44.235 477 220 7 36 510 27 459 7.80e-138 407
MS.gene37750.t1 AT4G22100 42.430 502 267 9 17 514 4 487 2.50e-137 407
MS.gene37750.t1 AT1G60090 41.797 512 266 10 14 514 4 494 6.32e-137 406
MS.gene37750.t1 AT3G62740 41.118 501 261 9 11 509 10 478 1.89e-133 397
MS.gene37750.t1 AT1G45191 42.620 481 254 9 36 512 30 492 7.53e-131 390
MS.gene37750.t1 AT1G45191 42.975 484 253 10 36 512 30 497 1.37e-130 390
MS.gene37750.t1 AT1G45191 42.355 484 245 10 36 512 30 486 3.19e-130 389
MS.gene37750.t1 AT1G45191 42.713 494 252 11 36 512 30 509 1.16e-129 388
MS.gene37750.t1 AT1G52400 44.804 433 224 9 31 455 35 460 1.69e-125 375
MS.gene37750.t1 AT4G27830 45.122 410 208 5 103 509 1 396 2.46e-123 368
MS.gene37750.t1 AT2G44470 48.083 339 172 3 32 368 26 362 1.00e-121 363
MS.gene37750.t1 AT1G02850 45.477 409 188 5 36 420 27 424 3.31e-121 363
MS.gene37750.t1 AT1G61810 43.341 413 226 6 103 511 1 409 8.10e-120 359
MS.gene37750.t1 AT3G62750 42.188 448 225 8 15 458 30 447 5.10e-119 358
MS.gene37750.t1 AT4G27820 44.878 410 210 5 103 509 1 397 2.79e-118 355
MS.gene37750.t1 AT4G27820 44.878 410 210 5 103 509 1 397 2.79e-118 355
MS.gene37750.t1 AT5G48375 39.220 487 220 8 21 502 24 439 3.51e-117 353
MS.gene37750.t1 AT3G18070 50.296 338 157 6 22 359 21 347 2.86e-116 348
MS.gene37750.t1 AT1G61810 43.237 414 228 5 11 420 9 419 2.98e-116 350
MS.gene37750.t1 AT3G62740 41.031 446 230 8 11 455 10 423 2.16e-115 348
MS.gene37750.t1 AT2G44460 49.030 361 176 6 154 509 1 358 1.18e-114 346
MS.gene37750.t1 AT1G60270 46.685 362 180 6 17 374 6 358 5.59e-111 335
MS.gene37750.t1 AT3G62750 47.076 342 164 5 15 356 4 328 5.90e-110 332
MS.gene37750.t1 AT3G62750 47.076 342 164 5 15 356 4 328 5.90e-110 332
MS.gene37750.t1 AT1G51490 48.563 348 164 6 42 387 27 361 3.83e-109 331
MS.gene37750.t1 AT3G62750 47.076 342 164 5 15 356 30 354 7.88e-109 331
MS.gene37750.t1 AT1G61820 44.414 367 197 5 149 511 4 367 1.17e-108 328
MS.gene37750.t1 AT3G62750 41.505 412 212 7 103 509 1 388 1.41e-108 330
MS.gene37750.t1 AT3G62750 41.505 412 212 7 103 509 1 388 1.41e-108 330
MS.gene37750.t1 AT3G18070 48.529 340 166 6 175 511 88 421 2.27e-108 330
MS.gene37750.t1 AT3G18070 49.412 85 38 2 22 106 21 100 2.10e-17 85.1
MS.gene37750.t1 AT2G44480 49.839 311 155 1 208 518 2 311 8.16e-108 324
MS.gene37750.t1 AT1G45191 41.818 385 199 6 36 417 30 392 1.24e-103 317
MS.gene37750.t1 AT1G45191 43.041 388 195 8 36 417 30 397 3.15e-103 316
MS.gene37750.t1 AT3G18070 49.206 315 151 6 200 511 1 309 1.95e-101 308
MS.gene37750.t1 AT1G61810 48.136 295 149 3 11 304 9 300 1.08e-91 283
MS.gene37750.t1 AT1G60270 47.826 276 135 5 103 374 1 271 9.12e-83 259
MS.gene37750.t1 AT3G18070 44.578 249 134 3 175 421 88 334 5.50e-69 225
MS.gene37750.t1 AT3G18070 49.412 85 38 2 22 106 21 100 8.34e-18 85.5
MS.gene37750.t1 AT3G18070 45.089 224 119 3 200 421 1 222 2.25e-62 204
MS.gene37750.t1 AT5G16580 39.519 291 153 7 181 466 27 299 1.33e-52 181
MS.gene37750.t1 AT3G06510 27.294 436 226 16 98 518 159 518 4.55e-28 118
MS.gene37750.t1 AT3G06510 27.033 455 237 18 98 518 159 552 8.15e-28 118

Find 113 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAATGTTCTTCTTCTTTC+TGG 0.066671 6.3:+72223016 MS.gene37750:CDS
AATATCAGCCATTTGGTTTA+AGG 0.097589 6.3:+72228618 MS.gene37750:CDS
TTTCTTACTTGGTAGTATTC+TGG 0.168901 6.3:-72224171 None:intergenic
TTGATCTATGTCACTGAAAA+TGG 0.241811 6.3:+72227858 MS.gene37750:CDS
TGTTGTGATTCTTAACTCTT+TGG 0.264243 6.3:+72223042 MS.gene37750:CDS
CAATCTCATCAATGAGCTTC+TGG 0.285394 6.3:+72224511 MS.gene37750:CDS
GAGGAAGGTCCCAATGAAAA+AGG 0.297919 6.3:-72224754 None:intergenic
GCCACTCTATGATACAAAAT+TGG 0.298973 6.3:+72225931 MS.gene37750:CDS
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.3:+72225971 MS.gene37750:CDS
TGATCAATACCATCGTTATA+AGG 0.309617 6.3:+72223946 MS.gene37750:CDS
TTGTAACTGTTCTATGTTGT+AGG 0.315056 6.3:-72228645 None:intergenic
AACATCTTCCTCTGCATATC+AGG 0.322753 6.3:+72223150 MS.gene37750:CDS
ACATCTCAACAGGGCAAGAT+AGG 0.328217 6.3:+72225881 MS.gene37750:CDS
CATTGATTGACAACTTTGAA+TGG 0.334348 6.3:+72228524 MS.gene37750:CDS
CAAACTCTTGAAGAAGAATA+TGG 0.340474 6.3:+72224776 MS.gene37750:CDS
ATCTGTGATGTAGCTGGGTT+TGG 0.344206 6.3:-72226382 None:intergenic
GTGGCAAAGGACCAAGTATA+TGG 0.345591 6.3:+72223700 MS.gene37750:CDS
TGATTATGAGCCGCGATATA+GGG 0.348212 6.3:-72225100 None:intergenic
CAATCCTTTGTGTGTCTTCA+AGG 0.355425 6.3:-72228166 None:intergenic
ACATGCAGGCAGCTTCAAAA+TGG 0.356308 6.3:+72227769 MS.gene37750:intron
GACAACTTTGAATGGACTTC+AGG 0.356473 6.3:+72228532 MS.gene37750:CDS
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.3:+72225150 MS.gene37750:CDS
CTAATTGCAGAAGGAAAGAT+TGG 0.359731 6.3:+72224452 MS.gene37750:intron
GATTGGTGGAGGTGTAAATA+AGG 0.373123 6.3:+72224469 MS.gene37750:CDS
TTGATTATGAGCCGCGATAT+AGG 0.376943 6.3:-72225101 None:intergenic
GAGGGACTTGCTAATATCAT+TGG 0.386434 6.3:-72223092 None:intergenic
TCAGGCTACACTTCAAGGTT+TGG 0.387145 6.3:+72228550 MS.gene37750:CDS
ACTTGATATGTAGAAAACTT+TGG 0.393184 6.3:-72226273 None:intergenic
TTTATGGATCCATTGACAAT+AGG 0.394559 6.3:+72226207 MS.gene37750:CDS
GGACTTCAGGCTACACTTCA+AGG 0.395818 6.3:+72228545 MS.gene37750:CDS
AATGATGAAGGACATCAATA+TGG 0.400440 6.3:+72224121 MS.gene37750:CDS
GCACATACCGTTGGGCCAAT+AGG 0.402277 6.3:-72227619 None:intergenic
GGGTGCATTAGTTGCATAAT+GGG 0.404463 6.3:-72226346 None:intergenic
TATCAAGTAAAGCTTGTAAG+AGG 0.412431 6.3:+72226288 MS.gene37750:CDS
GTGTACACAGACATCTCAAC+AGG 0.414741 6.3:+72225871 MS.gene37750:intron
CGGGTGCATTAGTTGCATAA+TGG 0.417931 6.3:-72226347 None:intergenic
TATTCTTCTTCAAGAGTTTG+AGG 0.425331 6.3:-72224773 None:intergenic
TAACTTTACAGGTAAGATAA+AGG 0.429861 6.3:+72223898 MS.gene37750:intron
AATCAACAAATTTAGTATGA+AGG 0.434281 6.3:+72223663 MS.gene37750:intron
GGGTTTGGCTTCACTTAACT+CGG 0.442075 6.3:-72226367 None:intergenic
AGCTCCATGCGGTCCTTGGT+AGG 0.451981 6.3:+72226240 MS.gene37750:CDS
CCCTAGCTCCATGCGGTCCT+TGG 0.454487 6.3:+72226236 MS.gene37750:CDS
TAGGAAATCCTTAAACCAAA+TGG 0.458885 6.3:-72228626 None:intergenic
TTTCAGTGACATAGATCAAC+GGG 0.465836 6.3:-72227854 None:intergenic
TCCATCAGCATAAGCATGCT+TGG 0.472004 6.3:-72225008 None:intergenic
TGGGAAACTACTTCGGTTGA+GGG 0.472280 6.3:-72223110 None:intergenic
AAGCGCAATGGAATACCTAT+TGG 0.478134 6.3:+72227604 MS.gene37750:CDS
CAAAGGATTGATTACTATCA+TGG 0.481431 6.3:+72228179 MS.gene37750:CDS
AATCCTTTGTGTGTCTTCAA+GGG 0.484608 6.3:-72228165 None:intergenic
CATCAATGAGCTTCTGGCCA+AGG 0.489392 6.3:+72224517 MS.gene37750:CDS
GTGGGAAACTACTTCGGTTG+AGG 0.493312 6.3:-72223111 None:intergenic
TGGTTATCAATTTATCCAAA+GGG 0.494731 6.3:+72227789 MS.gene37750:CDS
AAGATAAAGGACAAAAGTAA+TGG 0.495706 6.3:+72223911 MS.gene37750:CDS
TGGTCCTTTGCCACCAACAT+TGG 0.500603 6.3:-72223691 None:intergenic
AAGTGAATCTGTGATGTAGC+TGG 0.501010 6.3:-72226388 None:intergenic
GGGTAGTCTCCTATTGTCAA+TGG 0.501063 6.3:-72226216 None:intergenic
AATAGGTCATGAATTCCCTT+TGG 0.502202 6.3:-72227804 None:intergenic
GCAGCCAATGTTGGTGGCAA+AGG 0.506097 6.3:+72223687 MS.gene37750:CDS
CCATCCAAACATGAAATCAA+TGG 0.508555 6.3:-72225975 None:intergenic
ATGGTTATCAATTTATCCAA+AGG 0.512637 6.3:+72227788 MS.gene37750:CDS
GCCAAGCATGCTTATGCTGA+TGG 0.514658 6.3:+72225007 MS.gene37750:CDS
ACCAAGGACCGCATGGAGCT+AGG 0.516896 6.3:-72226237 None:intergenic
ACTTTCACACATAATTATCC+AGG 0.518312 6.3:+72223726 MS.gene37750:CDS
CCAAGGACCGCATGGAGCTA+GGG 0.523458 6.3:-72226236 None:intergenic
AACCTTGTGGGAAACTACTT+CGG 0.526212 6.3:-72223117 None:intergenic
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.3:+72225975 MS.gene37750:CDS
GCTTTCTCAAGAGGGAGTGT+TGG 0.529097 6.3:-72228143 None:intergenic
TTCAGTGGCGGAATCTCCAC+CGG 0.537381 6.3:-72225077 None:intergenic
TTGGAGATAGAGTAAAGCAT+TGG 0.540163 6.3:+72224957 MS.gene37750:CDS
AGGAATGGAGCGAATGTGAA+AGG 0.547916 6.3:+72228487 MS.gene37750:intron
TGCCAGGGTGAACATCGACC+AGG 0.548000 6.3:-72225040 None:intergenic
CTTCTTCAAGAGTTTGAGGA+AGG 0.549021 6.3:-72224769 None:intergenic
TGGCAAAGGACCAAGTATAT+GGG 0.550285 6.3:+72223701 MS.gene37750:CDS
GCTCCATGCGGTCCTTGGTA+GGG 0.552456 6.3:+72226241 MS.gene37750:CDS
CTTCAAGGGCTTTCTCAAGA+GGG 0.553607 6.3:-72228151 None:intergenic
CATCTCAACAGGGCAAGATA+GGG 0.554782 6.3:+72225882 MS.gene37750:CDS
TCTTCAAGGGCTTTCTCAAG+AGG 0.557439 6.3:-72228152 None:intergenic
GCAGAAGGAAAGATTGGTGG+AGG 0.557751 6.3:+72224458 MS.gene37750:intron
ATCAATGAGCTTCTGGCCAA+GGG 0.562187 6.3:+72224518 MS.gene37750:CDS
GGTTTGGCTTCACTTAACTC+GGG 0.563688 6.3:-72226366 None:intergenic
GGTGGAGGTGTAAATAAGGA+AGG 0.565682 6.3:+72224473 MS.gene37750:CDS
TGGCAAAACTTGAATTGCAC+CGG 0.571341 6.3:+72225058 MS.gene37750:CDS
GTGAAAGTATCCCATATACT+TGG 0.571422 6.3:-72223711 None:intergenic
ATGTGAAAGGGTACTTTGCA+TGG 0.573560 6.3:+72228500 MS.gene37750:CDS
GCATGCTTGGCAAAGCTCCA+TGG 0.583054 6.3:-72224995 None:intergenic
AACATTAATGTGTCAGTGGA+TGG 0.588696 6.3:+72225907 MS.gene37750:CDS
CACCTGGTCGATGTTCACCC+TGG 0.589434 6.3:+72225038 MS.gene37750:CDS
GTTTAATCCGATAAAATCAA+AGG 0.591787 6.3:-72226313 None:intergenic
ATTGCAGAAGGAAAGATTGG+TGG 0.594315 6.3:+72224455 MS.gene37750:intron
GGAAGATGTTGTAATGATGA+AGG 0.596214 6.3:+72224109 MS.gene37750:intron
ACTCCCTACCAAGGACCGCA+TGG 0.607116 6.3:-72226244 None:intergenic
GGAATGGAGCGAATGTGAAA+GGG 0.611773 6.3:+72228488 MS.gene37750:intron
GAAGGTGCAGCCAATGTTGG+TGG 0.614271 6.3:+72223681 MS.gene37750:CDS
TGGAATACCTATTGGCCCAA+CGG 0.614932 6.3:+72227612 MS.gene37750:CDS
AGTATTGAACCTTATAACGA+TGG 0.618495 6.3:-72223955 None:intergenic
TATGAAGGTGCAGCCAATGT+TGG 0.618565 6.3:+72223678 MS.gene37750:CDS
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.3:+72225061 MS.gene37750:CDS
ATCAAGTAAAGCTTGTAAGA+GGG 0.625020 6.3:+72226289 MS.gene37750:CDS
GGATAACATTAATGTGTCAG+TGG 0.627418 6.3:+72225903 MS.gene37750:CDS
GCTGATGGAAAGTTAGCACC+TGG 0.627941 6.3:+72225022 MS.gene37750:CDS
ATAACGATGGTATTGATCAA+CGG 0.630026 6.3:-72223942 None:intergenic
AGTGAATCTGTGATGTAGCT+GGG 0.637641 6.3:-72226387 None:intergenic
AACCGAAGTAGTTTCCCACA+AGG 0.641716 6.3:+72223115 MS.gene37750:CDS
ACTCTTGAAGAAGAATATGG+TGG 0.648422 6.3:+72224779 MS.gene37750:CDS
GGATCACATTGAATGAACCA+TGG 0.651187 6.3:+72224978 MS.gene37750:CDS
TTGGAGCACCTGATATGCAG+AGG 0.651627 6.3:-72223158 None:intergenic
CGCGATATAGGGTTCAGTGG+CGG 0.664027 6.3:-72225089 None:intergenic
TGGTAATCGACTCCCTACCA+AGG 0.679691 6.3:-72226253 None:intergenic
AGCCGCGATATAGGGTTCAG+TGG 0.679947 6.3:-72225092 None:intergenic
AAGCCCTTGAAGACACACAA+AGG 0.680808 6.3:+72228162 MS.gene37750:CDS
CGCCACTGAACCCTATATCG+CGG 0.707233 6.3:+72225090 MS.gene37750:CDS
TGTACACAGACATCTCAACA+GGG 0.744686 6.3:+72225872 MS.gene37750:intron
GAGACTACCCTAGCTCCATG+CGG 0.758435 6.3:+72226229 MS.gene37750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATTTTTATTTTA+AGG + chr6.3:72224266-72224285 MS.gene37750:intron 0.0%
!! AATTAAAATGTAAAAACATT+AGG - chr6.3:72227664-72227683 None:intergenic 10.0%
!! TAAAAGAATATTGAAATATT+TGG - chr6.3:72223180-72223199 None:intergenic 10.0%
!! TACTGTATTATTAATATTAA+TGG - chr6.3:72226454-72226473 None:intergenic 10.0%
!! TATATTGTGAATTTATATAT+AGG + chr6.3:72228101-72228120 MS.gene37750:intron 10.0%
!!! CAAAAGTTTTTTAAAAAAAA+AGG - chr6.3:72224217-72224236 None:intergenic 10.0%
!!! GTTTTCATTTTATATTTTTT+TGG + chr6.3:72227715-72227734 MS.gene37750:intron 10.0%
!!! TTTTATTTTATGAAGTATTA+TGG + chr6.3:72223765-72223784 MS.gene37750:intron 10.0%
!! ATATAATGCTTATTTCAATT+AGG + chr6.3:72227693-72227712 MS.gene37750:intron 15.0%
!! ATTGTTAACATAAATATATG+TGG - chr6.3:72227549-72227568 None:intergenic 15.0%
!! GAACTTTATTAAAAATAGTA+AGG - chr6.3:72224361-72224380 None:intergenic 15.0%
!! TATATATGATAGTATATGAT+AGG + chr6.3:72225313-72225332 MS.gene37750:intron 15.0%
!! TTATGATATTTGATTATCTT+TGG - chr6.3:72224846-72224865 None:intergenic 15.0%
!!! AGTTACATTATTTTATGTTT+AGG - chr6.3:72226094-72226113 None:intergenic 15.0%
!!! ATTTATTGATTGAAAGTTAT+AGG - chr6.3:72224412-72224431 None:intergenic 15.0%
!!! ATTTTTTAAGGAGTTTATTT+TGG - chr6.3:72225703-72225722 None:intergenic 15.0%
!!! CTTTTTAAAAAATGTATTGT+AGG + chr6.3:72226184-72226203 MS.gene37750:intron 15.0%
!!! TAATGTATCAAAATTTTACA+AGG + chr6.3:72228467-72228486 MS.gene37750:intron 15.0%
!!! TTTATTGATTGAAAGTTATA+GGG - chr6.3:72224411-72224430 None:intergenic 15.0%
!!! TTTGTCGTTTTTTTTAATAT+TGG - chr6.3:72227368-72227387 None:intergenic 15.0%
!!! TTTTTTAAGGAGTTTATTTT+GGG - chr6.3:72225702-72225721 None:intergenic 15.0%
!! AAAAATGTATTGTAGGTTTA+TGG + chr6.3:72226191-72226210 MS.gene37750:intron 20.0%
!! AAAGTACAATAAAAGAATCT+AGG + chr6.3:72226951-72226970 MS.gene37750:intron 20.0%
!! AAGTACAATAAAAGAATCTA+GGG + chr6.3:72226952-72226971 MS.gene37750:intron 20.0%
!! AATCAACAAATTTAGTATGA+AGG + chr6.3:72223663-72223682 MS.gene37750:intron 20.0%
!! AATTAACAAAACCACAAAAA+TGG - chr6.3:72226787-72226806 None:intergenic 20.0%
!! ACTTTCAATCTATATCTTTA+AGG + chr6.3:72227906-72227925 MS.gene37750:intron 20.0%
!! AGTTGTCCTATTTATATTAT+AGG - chr6.3:72223569-72223588 None:intergenic 20.0%
!! ATAATTATTAACTAGCTAGT+AGG + chr6.3:72227448-72227467 MS.gene37750:intron 20.0%
!! TAATCAAATATCATAAAGTC+AGG + chr6.3:72224850-72224869 MS.gene37750:intron 20.0%
!! TACACAAAGTAAAGAAAATA+AGG - chr6.3:72225856-72225875 None:intergenic 20.0%
!! TCCAATCCTATAATATAAAT+AGG + chr6.3:72223560-72223579 MS.gene37750:intron 20.0%
!! TCCTATTTATATTATAGGAT+TGG - chr6.3:72223564-72223583 None:intergenic 20.0%
!! TGAAGAAATACATATAGTAT+TGG - chr6.3:72225804-72225823 None:intergenic 20.0%
!! TGAGTTTCACATATAATTTA+TGG - chr6.3:72226020-72226039 None:intergenic 20.0%
!! TGTGAATTTATATATAGGTA+TGG + chr6.3:72228106-72228125 MS.gene37750:intron 20.0%
!!! AACATTAACCACTTATTTTA+TGG - chr6.3:72226661-72226680 None:intergenic 20.0%
!!! AAGACATTAAACTCTTTTAA+AGG + chr6.3:72226063-72226082 MS.gene37750:intron 20.0%
!!! ACATTAACCACTTATTTTAT+GGG - chr6.3:72226660-72226679 None:intergenic 20.0%
!!! ACCATTTTATTATATGCAAA+GGG - chr6.3:72228035-72228054 None:intergenic 20.0%
!!! ATATTTTTGGATATCTTTTG+AGG - chr6.3:72228603-72228622 None:intergenic 20.0%
!!! ATGCAAAGTTTTTTATTTGA+GGG - chr6.3:72228242-72228261 None:intergenic 20.0%
!!! CTCTCATTAACTTTTTTTAA+TGG + chr6.3:72228325-72228344 MS.gene37750:intron 20.0%
!!! GAACTTTGTTTTAAAGAATT+TGG + chr6.3:72224938-72224957 MS.gene37750:CDS 20.0%
!!! GTATATGTTTTATGTTTTCA+TGG + chr6.3:72226703-72226722 MS.gene37750:intron 20.0%
!!! TATCAAAATTTTACAAGGAA+TGG + chr6.3:72228472-72228491 MS.gene37750:intron 20.0%
!!! TCTTCAATGGTTATTTTTTA+AGG - chr6.3:72225715-72225734 None:intergenic 20.0%
!!! TTATTCAGTGTTATACTTTT+TGG + chr6.3:72223286-72223305 MS.gene37750:intron 20.0%
!!! TTATTTTAATGTAGAGCAAT+AGG - chr6.3:72227824-72227843 None:intergenic 20.0%
!!! TTTTGCAAGTACAAAAATAA+TGG - chr6.3:72226934-72226953 None:intergenic 20.0%
! AAGATAAAGGACAAAAGTAA+TGG + chr6.3:72223911-72223930 MS.gene37750:CDS 25.0%
! AATAAAAAAGGAAAAAGACC+TGG - chr6.3:72223747-72223766 None:intergenic 25.0%
! ACCCTTTGCATATAATAAAA+TGG + chr6.3:72228031-72228050 MS.gene37750:intron 25.0%
! ACTTGATATGTAGAAAACTT+TGG - chr6.3:72226276-72226295 None:intergenic 25.0%
! AGATTGAAAGTAAATCTAGT+TGG - chr6.3:72227897-72227916 None:intergenic 25.0%
! AGTTATGCAACAAAATTTGT+TGG - chr6.3:72223883-72223902 None:intergenic 25.0%
! ATAAAATGGTGCTTAGATAT+AGG + chr6.3:72228045-72228064 MS.gene37750:intron 25.0%
! ATGGTTATCAATTTATCCAA+AGG + chr6.3:72227788-72227807 MS.gene37750:CDS 25.0%
! GTTTAATCCGATAAAATCAA+AGG - chr6.3:72226316-72226335 None:intergenic 25.0%
! TAAAATGGTGCTTAGATATA+GGG + chr6.3:72228046-72228065 MS.gene37750:intron 25.0%
! TAAATGAAGATTATTACCCT+TGG - chr6.3:72224537-72224556 None:intergenic 25.0%
! TAACTTTACAGGTAAGATAA+AGG + chr6.3:72223898-72223917 MS.gene37750:intron 25.0%
! TATAAACCAATGCTTAACTT+TGG - chr6.3:72227934-72227953 None:intergenic 25.0%
! TGGTTATCAATTTATCCAAA+GGG + chr6.3:72227789-72227808 MS.gene37750:CDS 25.0%
! TTCCAAAAATAAAACCTTGT+GGG - chr6.3:72223132-72223151 None:intergenic 25.0%
! TTCTACATTCATACTATGTT+TGG + chr6.3:72223848-72223867 MS.gene37750:intron 25.0%
!! AAAGAATAGCCTTAATTAAG+TGG - chr6.3:72225761-72225780 None:intergenic 25.0%
!! AATTTTTATGCTAACCACTT+TGG - chr6.3:72225475-72225494 None:intergenic 25.0%
!! ATTTTGTTGCATAACTTTAC+AGG + chr6.3:72223887-72223906 MS.gene37750:intron 25.0%
!! CACCATTTTATTATATGCAA+AGG - chr6.3:72228036-72228055 None:intergenic 25.0%
!! CTTATAGATTTTCAATCTCT+TGG + chr6.3:72224147-72224166 MS.gene37750:CDS 25.0%
!! GTTAATGTTTTACGTTTTGA+TGG + chr6.3:72226672-72226691 MS.gene37750:intron 25.0%
!! TAAGGTATCAATAGTGAATA+TGG - chr6.3:72225838-72225857 None:intergenic 25.0%
!! TTAATTTTCCAATCCATTGA+AGG + chr6.3:72225438-72225457 MS.gene37750:intron 25.0%
!! TTTATGTTTTCATGGTTAGT+GGG + chr6.3:72226711-72226730 MS.gene37750:intron 25.0%
!! TTTTATGTTTTCATGGTTAG+TGG + chr6.3:72226710-72226729 MS.gene37750:intron 25.0%
!!! AGTATTATGGTTTTTTTCAC+CGG + chr6.3:72223778-72223797 MS.gene37750:intron 25.0%
!!! AGTTAACAGTATTTTTTGAG+AGG - chr6.3:72224314-72224333 None:intergenic 25.0%
!!! CCTTGAGAATTTTTTTGAAT+CGG + chr6.3:72226995-72227014 MS.gene37750:intron 25.0%
!!! GATGCAAAGTTTTTTATTTG+AGG - chr6.3:72228243-72228262 None:intergenic 25.0%
!!! GTTAATATCATCCATTTTTG+TGG + chr6.3:72226773-72226792 MS.gene37750:intron 25.0%
AAATATGTATGAGTTGCATC+AGG + chr6.3:72225634-72225653 MS.gene37750:intron 30.0%
AAGTTATAGGGCTTCTAATA+TGG - chr6.3:72224399-72224418 None:intergenic 30.0%
AAGTTTATGTGAGTTAGATC+CGG - chr6.3:72223800-72223819 None:intergenic 30.0%
AATGATGAAGGACATCAATA+TGG + chr6.3:72224121-72224140 MS.gene37750:CDS 30.0%
ACACAGAAGTTAAAACATCA+TGG - chr6.3:72223997-72224016 None:intergenic 30.0%
ACTTTCACACATAATTATCC+AGG + chr6.3:72223726-72223745 MS.gene37750:CDS 30.0%
AGAATACTACCAAGTAAGAA+AGG + chr6.3:72224173-72224192 MS.gene37750:intron 30.0%
ATCAAGTAAAGCTTGTAAGA+GGG + chr6.3:72226289-72226308 MS.gene37750:CDS 30.0%
ATCCAAAAATATCAGCCATT+TGG + chr6.3:72228611-72228630 MS.gene37750:CDS 30.0%
ATTATTAACTAGCTAGTAGG+AGG + chr6.3:72227451-72227470 MS.gene37750:intron 30.0%
ATTCCTTTACTAATTGCAGA+AGG + chr6.3:72224443-72224462 MS.gene37750:intron 30.0%
CAAACTCTTGAAGAAGAATA+TGG + chr6.3:72224776-72224795 MS.gene37750:CDS 30.0%
CAAAGGATTGATTACTATCA+TGG + chr6.3:72228179-72228198 MS.gene37750:CDS 30.0%
CCGATTCAAAAAAATTCTCA+AGG - chr6.3:72226998-72227017 None:intergenic 30.0%
CTAAATGTTCTTCTTCTTTC+TGG + chr6.3:72223016-72223035 MS.gene37750:CDS 30.0%
GAATACTACCAAGTAAGAAA+GGG + chr6.3:72224174-72224193 MS.gene37750:intron 30.0%
GTATAACACTGAATAAGAGA+TGG - chr6.3:72223282-72223301 None:intergenic 30.0%
GTGAGTAATAAGTCTCATAT+TGG + chr6.3:72226593-72226612 MS.gene37750:intron 30.0%
GTTCCAAAAATAAAACCTTG+TGG - chr6.3:72223133-72223152 None:intergenic 30.0%
TACACCATTAACCACAAAAA+TGG - chr6.3:72226895-72226914 None:intergenic 30.0%
TAGGAAATCCTTAAACCAAA+TGG - chr6.3:72228629-72228648 None:intergenic 30.0%
TATCAAGTAAAGCTTGTAAG+AGG + chr6.3:72226288-72226307 MS.gene37750:CDS 30.0%
TATTCTTCTTCAAGAGTTTG+AGG - chr6.3:72224776-72224795 None:intergenic 30.0%
TCTCATATTGGATAGAAAAG+TGG + chr6.3:72226605-72226624 MS.gene37750:intron 30.0%
TGATCAATACCATCGTTATA+AGG + chr6.3:72223946-72223965 MS.gene37750:CDS 30.0%
TGTCTACAAAACTAAGTATC+AGG + chr6.3:72225150-72225169 MS.gene37750:CDS 30.0%
TGTTGTGATTCTTAACTCTT+TGG + chr6.3:72223042-72223061 MS.gene37750:CDS 30.0%
TTCAATTGCTATGTCAATGT+AGG + chr6.3:72224713-72224732 MS.gene37750:intron 30.0%
TTGATCTATGTCACTGAAAA+TGG + chr6.3:72227858-72227877 MS.gene37750:CDS 30.0%
TTGTAACTGTTCTATGTTGT+AGG - chr6.3:72228648-72228667 None:intergenic 30.0%
TTTATGGATCCATTGACAAT+AGG + chr6.3:72226207-72226226 MS.gene37750:CDS 30.0%
TTTCCTTCTGCAATTAGTAA+AGG - chr6.3:72224449-72224468 None:intergenic 30.0%
! AACCAAATGGCTGATATTTT+TGG - chr6.3:72228616-72228635 None:intergenic 30.0%
! AATATCAGCCATTTGGTTTA+AGG + chr6.3:72228618-72228637 MS.gene37750:CDS 30.0%
! AATGATTTTTGAACCCACTT+GGG + chr6.3:72224556-72224575 MS.gene37750:intron 30.0%
! AGTATTGAACCTTATAACGA+TGG - chr6.3:72223958-72223977 None:intergenic 30.0%
! CATTGATTGACAACTTTGAA+TGG + chr6.3:72228524-72228543 MS.gene37750:CDS 30.0%
! TAATGATTTTTGAACCCACT+TGG + chr6.3:72224555-72224574 MS.gene37750:intron 30.0%
! TCCAATTTTGTATCATAGAG+TGG - chr6.3:72225935-72225954 None:intergenic 30.0%
! TTATGTTTTCATGGTTAGTG+GGG + chr6.3:72226712-72226731 MS.gene37750:intron 30.0%
! TTTCTTACTTGGTAGTATTC+TGG - chr6.3:72224174-72224193 None:intergenic 30.0%
! TTTTCAGTGACATAGATCAA+CGG - chr6.3:72227858-72227877 None:intergenic 30.0%
!! ATAACGATGGTATTGATCAA+CGG - chr6.3:72223945-72223964 None:intergenic 30.0%
!! ATTGACTTCTAGAAGCTTTT+AGG + chr6.3:72227180-72227199 MS.gene37750:intron 30.0%
!! GATTTTGATGTCTACTCAAA+TGG + chr6.3:72225222-72225241 MS.gene37750:intron 30.0%
!! TCATCCATTTTTGTGGTTAA+TGG + chr6.3:72226888-72226907 MS.gene37750:intron 30.0%
!! TTACGTTTTGATGGTTAGTA+GGG + chr6.3:72226681-72226700 MS.gene37750:intron 30.0%
!! TTTACGTTTTGATGGTTAGT+AGG + chr6.3:72226680-72226699 MS.gene37750:intron 30.0%
!!! TTCCCACAAGGTTTTATTTT+TGG + chr6.3:72223127-72223146 MS.gene37750:CDS 30.0%
AACATTAATGTGTCAGTGGA+TGG + chr6.3:72225907-72225926 MS.gene37750:CDS 35.0%
AATAGCTAGCCAAAGCATAA+AGG - chr6.3:72225282-72225301 None:intergenic 35.0%
AATAGGTCATGAATTCCCTT+TGG - chr6.3:72227807-72227826 None:intergenic 35.0%
AATCCTTTGTGTGTCTTCAA+GGG - chr6.3:72228168-72228187 None:intergenic 35.0%
ACTCTTGAAGAAGAATATGG+TGG + chr6.3:72224779-72224798 MS.gene37750:CDS 35.0%
AGCTAGTAGGAGGAAAATTT+GGG + chr6.3:72227461-72227480 MS.gene37750:intron 35.0%
AGGGTTATAAATACCACTGT+TGG - chr6.3:72227102-72227121 None:intergenic 35.0%
ATAGCTAGCCAAAGCATAAA+GGG - chr6.3:72225281-72225300 None:intergenic 35.0%
ATTGAAGATGCTCTACTCTA+AGG + chr6.3:72225727-72225746 MS.gene37750:intron 35.0%
ATTGCGTCTTTCATGTGTTT+CGG - chr6.3:72227037-72227056 None:intergenic 35.0%
CAATGAAAAAGGGTCACAAA+GGG - chr6.3:72224746-72224765 None:intergenic 35.0%
CATATTGGATAGAAAAGTGG+AGG + chr6.3:72226608-72226627 MS.gene37750:intron 35.0%
CCATCCAAACATGAAATCAA+TGG - chr6.3:72225978-72225997 None:intergenic 35.0%
CGACATTTCTGATATAATGC+AGG + chr6.3:72224088-72224107 MS.gene37750:intron 35.0%
CTAATTGCAGAAGGAAAGAT+TGG + chr6.3:72224452-72224471 MS.gene37750:intron 35.0%
CTCTAACTATCACTATATCC+AGG + chr6.3:72224894-72224913 MS.gene37750:intron 35.0%
CTGGATATAGTGATAGTTAG+AGG - chr6.3:72224896-72224915 None:intergenic 35.0%
GAAATGTTAATCGATACCTC+CGG - chr6.3:72226165-72226184 None:intergenic 35.0%
GAACACTTTATAAGTGAGAG+AGG + chr6.3:72226633-72226652 MS.gene37750:intron 35.0%
GCCACTCTATGATACAAAAT+TGG + chr6.3:72225931-72225950 MS.gene37750:CDS 35.0%
GGAAGATGTTGTAATGATGA+AGG + chr6.3:72224109-72224128 MS.gene37750:intron 35.0%
GGATAACATTAATGTGTCAG+TGG + chr6.3:72225903-72225922 MS.gene37750:CDS 35.0%
GGGTTATAAATACCACTGTT+GGG - chr6.3:72227101-72227120 None:intergenic 35.0%
GTTAAACTCCTTCAATGGAT+TGG - chr6.3:72225449-72225468 None:intergenic 35.0%
TAGCTAGTAGGAGGAAAATT+TGG + chr6.3:72227460-72227479 MS.gene37750:intron 35.0%
TTGAAGATGCTCTACTCTAA+GGG + chr6.3:72225728-72225747 MS.gene37750:intron 35.0%
TTGGACTTCGTTGACATAAA+AGG + chr6.3:72227734-72227753 MS.gene37750:intron 35.0%
TTGGAGATAGAGTAAAGCAT+TGG + chr6.3:72224957-72224976 MS.gene37750:CDS 35.0%
TTGGGTGAACATATGAGTAT+GGG + chr6.3:72227479-72227498 MS.gene37750:intron 35.0%
TTTCAGTGACATAGATCAAC+GGG - chr6.3:72227857-72227876 None:intergenic 35.0%
TTTGGGTGAACATATGAGTA+TGG + chr6.3:72227478-72227497 MS.gene37750:intron 35.0%
! AATAGCCTTAATTAAGTGGC+TGG - chr6.3:72225757-72225776 None:intergenic 35.0%
! ACTTAAAGCACAACTTGCTT+AGG - chr6.3:72227154-72227173 None:intergenic 35.0%
! ATAGTCTTGAAAGTCATTCC+TGG - chr6.3:72224915-72224934 None:intergenic 35.0%
! CTTAAAGCACAACTTGCTTA+GGG - chr6.3:72227153-72227172 None:intergenic 35.0%
! TTAGAGTAGAGCATCTTCAA+TGG - chr6.3:72225728-72225747 None:intergenic 35.0%
!! AGAGCCATTGATTTCATGTT+TGG + chr6.3:72225971-72225990 MS.gene37750:CDS 35.0%
!! AGAGGGTCCTTTGATTTTAT+CGG + chr6.3:72226306-72226325 MS.gene37750:CDS 35.0%
!! CCATTGATTTCATGTTTGGA+TGG + chr6.3:72225975-72225994 MS.gene37750:CDS 35.0%
!! CTTTGTGACCCTTTTTCATT+GGG + chr6.3:72224745-72224764 MS.gene37750:CDS 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr6.3:72223714-72223733 None:intergenic 35.0%
!!! TTTTTTACAGACAAGCGCAA+TGG + chr6.3:72227592-72227611 MS.gene37750:intron 35.0%
AACACATGAAAGACGCAATG+AGG + chr6.3:72227038-72227057 MS.gene37750:intron 40.0%
AACATCTTCCTCTGCATATC+AGG + chr6.3:72223150-72223169 MS.gene37750:CDS 40.0%
AACCGTCAATCTACTCCTAA+GGG - chr6.3:72227316-72227335 None:intergenic 40.0%
AACCTTGTGGGAAACTACTT+CGG - chr6.3:72223120-72223139 None:intergenic 40.0%
AAGCAAAAACAAGTCCACAG+AGG - chr6.3:72227122-72227141 None:intergenic 40.0%
AAGCGCAATGGAATACCTAT+TGG + chr6.3:72227604-72227623 MS.gene37750:CDS 40.0%
AAGTGAATCTGTGATGTAGC+TGG - chr6.3:72226391-72226410 None:intergenic 40.0%
AATACGTCCCCTTTATGCTT+TGG + chr6.3:72225270-72225289 MS.gene37750:intron 40.0%
AATTATCACGCACATACCGT+TGG - chr6.3:72227631-72227650 None:intergenic 40.0%
AGCAAAAACAAGTCCACAGA+GGG - chr6.3:72227121-72227140 None:intergenic 40.0%
AGGAAGGTCCCAATGAAAAA+GGG - chr6.3:72224756-72224775 None:intergenic 40.0%
AGTGAATCTGTGATGTAGCT+GGG - chr6.3:72226390-72226409 None:intergenic 40.0%
ATTATCACGCACATACCGTT+GGG - chr6.3:72227630-72227649 None:intergenic 40.0%
ATTGCAGAAGGAAAGATTGG+TGG + chr6.3:72224455-72224474 MS.gene37750:intron 40.0%
CAAATAGTGATTCACGCTGA+AGG + chr6.3:72228665-72228684 MS.gene37750:CDS 40.0%
CAATCCTTTGTGTGTCTTCA+AGG - chr6.3:72228169-72228188 None:intergenic 40.0%
CAATCTCATCAATGAGCTTC+TGG + chr6.3:72224511-72224530 MS.gene37750:CDS 40.0%
CCAAGTAAGAAAGGGAAACT+AGG + chr6.3:72224182-72224201 MS.gene37750:intron 40.0%
CCAATGAAAAAGGGTCACAA+AGG - chr6.3:72224747-72224766 None:intergenic 40.0%
CCTAGTTTCCCTTTCTTACT+TGG - chr6.3:72224185-72224204 None:intergenic 40.0%
CCTTAGTTTAACACACAGCA+AGG + chr6.3:72226481-72226500 MS.gene37750:intron 40.0%
CTTATTACTCACACTTGCAG+AGG - chr6.3:72226585-72226604 None:intergenic 40.0%
CTTCTTCAAGAGTTTGAGGA+AGG - chr6.3:72224772-72224791 None:intergenic 40.0%
GAGAGGACCCATAAAATAAG+TGG + chr6.3:72226650-72226669 MS.gene37750:intron 40.0%
GGAACCTATATTACACATGC+AGG + chr6.3:72227755-72227774 MS.gene37750:intron 40.0%
GGATCACATTGAATGAACCA+TGG + chr6.3:72224978-72224997 MS.gene37750:CDS 40.0%
GGGTGCATTAGTTGCATAAT+GGG - chr6.3:72226349-72226368 None:intergenic 40.0%
GTGGTATTTATAACCCTCTG+TGG + chr6.3:72227105-72227124 MS.gene37750:intron 40.0%
TAGCTAGCCAAAGCATAAAG+GGG - chr6.3:72225280-72225299 None:intergenic 40.0%
TCTACTCAAATGGCAAGGTA+GGG + chr6.3:72225232-72225251 MS.gene37750:intron 40.0%
TGATGTCTACTCAAATGGCA+AGG + chr6.3:72225227-72225246 MS.gene37750:intron 40.0%
TGATTATGAGCCGCGATATA+GGG - chr6.3:72225103-72225122 None:intergenic 40.0%
TGCTTAGATATAGGGACAGA+GGG + chr6.3:72228054-72228073 MS.gene37750:intron 40.0%
TGGCAAAACTTGAATTGCAC+CGG + chr6.3:72225058-72225077 MS.gene37750:CDS 40.0%
TGGCAAAGGACCAAGTATAT+GGG + chr6.3:72223701-72223720 MS.gene37750:CDS 40.0%
TGTACACAGACATCTCAACA+GGG + chr6.3:72225872-72225891 MS.gene37750:intron 40.0%
TTAGCTCACTCAAATTGCAC+CGG - chr6.3:72224652-72224671 None:intergenic 40.0%
TTGATTATGAGCCGCGATAT+AGG - chr6.3:72225104-72225123 None:intergenic 40.0%
! AAGGTGCCAAAGTTAAGCAT+TGG + chr6.3:72227925-72227944 MS.gene37750:intron 40.0%
! CCTTGCTGTGTGTTAAACTA+AGG - chr6.3:72226484-72226503 None:intergenic 40.0%
! GACAACTTTGAATGGACTTC+AGG + chr6.3:72228532-72228551 MS.gene37750:CDS 40.0%
! GATTGGTGGAGGTGTAAATA+AGG + chr6.3:72224469-72224488 MS.gene37750:CDS 40.0%
! TTTTTGAACCCACTTGGGTT+TGG + chr6.3:72224561-72224580 MS.gene37750:intron 40.0%
!! AAGCTTTTAGGAGACTGTTG+AGG + chr6.3:72227192-72227211 MS.gene37750:intron 40.0%
!! ATGTGAAAGGGTACTTTGCA+TGG + chr6.3:72228500-72228519 MS.gene37750:CDS 40.0%
!! CCTTTGTGACCCTTTTTCAT+TGG + chr6.3:72224744-72224763 MS.gene37750:CDS 40.0%
!! GAGGGACTTGCTAATATCAT+TGG - chr6.3:72223095-72223114 None:intergenic 40.0%
!! GTGCAATTCAAGTTTTGCCA+GGG - chr6.3:72225058-72225077 None:intergenic 40.0%
AACCGAAGTAGTTTCCCACA+AGG + chr6.3:72223115-72223134 MS.gene37750:CDS 45.0%
AAGCCCTTGAAGACACACAA+AGG + chr6.3:72228162-72228181 MS.gene37750:CDS 45.0%
ACATCTCAACAGGGCAAGAT+AGG + chr6.3:72225881-72225900 MS.gene37750:CDS 45.0%
ACATGAAAGACGCAATGAGG+CGG + chr6.3:72227041-72227060 MS.gene37750:intron 45.0%
ACATGCAGGCAGCTTCAAAA+TGG + chr6.3:72227769-72227788 MS.gene37750:intron 45.0%
AGGAATGGAGCGAATGTGAA+AGG + chr6.3:72228487-72228506 MS.gene37750:intron 45.0%
AGGAGTTTAACGTGCCAAAG+TGG + chr6.3:72225458-72225477 MS.gene37750:intron 45.0%
ATCAATGAGCTTCTGGCCAA+GGG + chr6.3:72224518-72224537 MS.gene37750:CDS 45.0%
ATCTGTGATGTAGCTGGGTT+TGG - chr6.3:72226385-72226404 None:intergenic 45.0%
CAAAACTTGAATTGCACCGG+TGG + chr6.3:72225061-72225080 MS.gene37750:CDS 45.0%
CACTGTTGGGATCATTCTCA+AGG - chr6.3:72227088-72227107 None:intergenic 45.0%
CATCTCAACAGGGCAAGATA+GGG + chr6.3:72225882-72225901 MS.gene37750:CDS 45.0%
CGGGTGCATTAGTTGCATAA+TGG - chr6.3:72226350-72226369 None:intergenic 45.0%
CTTCAAGGGCTTTCTCAAGA+GGG - chr6.3:72228154-72228173 None:intergenic 45.0%
CTTGAGAATGATCCCAACAG+TGG + chr6.3:72227086-72227105 MS.gene37750:intron 45.0%
GAACCGTCAATCTACTCCTA+AGG - chr6.3:72227317-72227336 None:intergenic 45.0%
GAGGAAGGTCCCAATGAAAA+AGG - chr6.3:72224757-72224776 None:intergenic 45.0%
GCTGCCTGCATGTGTAATAT+AGG - chr6.3:72227762-72227781 None:intergenic 45.0%
GGAATGGAGCGAATGTGAAA+GGG + chr6.3:72228488-72228507 MS.gene37750:intron 45.0%
GGCACGTTAAACTCCTTCAA+TGG - chr6.3:72225454-72225473 None:intergenic 45.0%
GGGTAGTCTCCTATTGTCAA+TGG - chr6.3:72226219-72226238 None:intergenic 45.0%
GGGTTTGGCTAAGTGGTAAT+TGG + chr6.3:72224576-72224595 MS.gene37750:intron 45.0%
GGTTGCCAGCCACTTAATTA+AGG + chr6.3:72225749-72225768 MS.gene37750:intron 45.0%
GTCTACTCAAATGGCAAGGT+AGG + chr6.3:72225231-72225250 MS.gene37750:intron 45.0%
GTGCTTAGATATAGGGACAG+AGG + chr6.3:72228053-72228072 MS.gene37750:intron 45.0%
GTGGCAAAGGACCAAGTATA+TGG + chr6.3:72223700-72223719 MS.gene37750:CDS 45.0%
GTGTACACAGACATCTCAAC+AGG + chr6.3:72225871-72225890 MS.gene37750:intron 45.0%
TCAGGCTACACTTCAAGGTT+TGG + chr6.3:72228550-72228569 MS.gene37750:CDS 45.0%
TCCATCAGCATAAGCATGCT+TGG - chr6.3:72225011-72225030 None:intergenic 45.0%
TCTTCAAGGGCTTTCTCAAG+AGG - chr6.3:72228155-72228174 None:intergenic 45.0%
TGCTTACATACAGGAACGGA+TGG - chr6.3:72228012-72228031 None:intergenic 45.0%
TGGAATACCTATTGGCCCAA+CGG + chr6.3:72227612-72227631 MS.gene37750:CDS 45.0%
TGGCTAAGTGGTAATTGGCT+TGG + chr6.3:72224581-72224600 MS.gene37750:intron 45.0%
TGGGAAACTACTTCGGTTGA+GGG - chr6.3:72223113-72223132 None:intergenic 45.0%
TGTTTCCTTAACCAGTGCTC+CGG + chr6.3:72226143-72226162 MS.gene37750:intron 45.0%
! AGGGTGCTTACATACAGGAA+CGG - chr6.3:72228016-72228035 None:intergenic 45.0%
! GGCTAAGTGGTAATTGGCTT+GGG + chr6.3:72224582-72224601 MS.gene37750:intron 45.0%
! GGGTTTGGCTTCACTTAACT+CGG - chr6.3:72226370-72226389 None:intergenic 45.0%
! GGTGGAGGTGTAAATAAGGA+AGG + chr6.3:72224473-72224492 MS.gene37750:CDS 45.0%
! GGTTTGGCTTCACTTAACTC+GGG - chr6.3:72226369-72226388 None:intergenic 45.0%
! TATGAAGGTGCAGCCAATGT+TGG + chr6.3:72223678-72223697 MS.gene37750:CDS 45.0%
!! CTTTTAGGAGACTGTTGAGG+CGG + chr6.3:72227195-72227214 MS.gene37750:intron 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG - chr6.3:72225059-72225078 None:intergenic 45.0%
!! TGCAAAGGGTGCTTACATAC+AGG - chr6.3:72228021-72228040 None:intergenic 45.0%
!! TAGATAAAATTAAAAAAAAA+AGG - chr6.3:72228432-72228451 None:intergenic 5.0%
!! TTCATAAAATAAAATAAAAA+AGG - chr6.3:72223759-72223778 None:intergenic 5.0%
!!! AACTTTTAAAAAATATATAA+TGG + chr6.3:72224330-72224349 MS.gene37750:intron 5.0%
AACCTGCACAAGGTGTGCAA+AGG - chr6.3:72223320-72223339 None:intergenic 50.0%
ACCACTTAGCCAAACCCAAG+TGG - chr6.3:72224573-72224592 None:intergenic 50.0%
ACCTGCACAAGGTGTGCAAA+GGG - chr6.3:72223319-72223338 None:intergenic 50.0%
ATCAGGATGACGTGGCATTG+TGG + chr6.3:72225651-72225670 MS.gene37750:intron 50.0%
CATCAATGAGCTTCTGGCCA+AGG + chr6.3:72224517-72224536 MS.gene37750:CDS 50.0%
CCACTTAGCCAAACCCAAGT+GGG - chr6.3:72224572-72224591 None:intergenic 50.0%
GCAGAAGGAAAGATTGGTGG+AGG + chr6.3:72224458-72224477 MS.gene37750:intron 50.0%
GCCAAGCATGCTTATGCTGA+TGG + chr6.3:72225007-72225026 MS.gene37750:CDS 50.0%
GCTGATGGAAAGTTAGCACC+TGG + chr6.3:72225022-72225041 MS.gene37750:CDS 50.0%
GGACTTCAGGCTACACTTCA+AGG + chr6.3:72228545-72228564 MS.gene37750:CDS 50.0%
GGCCCTTAGGAGTAGATTGA+CGG + chr6.3:72227311-72227330 MS.gene37750:intron 50.0%
GTCTCAGGTTCGATTCTCTC+CGG + chr6.3:72224630-72224649 MS.gene37750:intron 50.0%
GTGGGAAACTACTTCGGTTG+AGG - chr6.3:72223114-72223133 None:intergenic 50.0%
TCAGGATGACGTGGCATTGT+GGG + chr6.3:72225652-72225671 MS.gene37750:intron 50.0%
TGAGTTGCATCAGGATGACG+TGG + chr6.3:72225643-72225662 MS.gene37750:intron 50.0%
TGGTCCTTTGCCACCAACAT+TGG - chr6.3:72223694-72223713 None:intergenic 50.0%
! AGAGTGCTTCAACCTGCACA+AGG - chr6.3:72223330-72223349 None:intergenic 50.0%
! GCTTTCTCAAGAGGGAGTGT+TGG - chr6.3:72228146-72228165 None:intergenic 50.0%
! TGGTAATCGACTCCCTACCA+AGG - chr6.3:72226256-72226275 None:intergenic 50.0%
! TTGGAGCACCTGATATGCAG+AGG - chr6.3:72223161-72223180 None:intergenic 50.0%
! TTGTGCAGGTTGAAGCACTC+TGG + chr6.3:72223329-72223348 MS.gene37750:intron 50.0%
!! TGGTAATTGGCTTGGGACCT+GGG + chr6.3:72224589-72224608 MS.gene37750:intron 50.0%
AATCGATACCTCCGGAGCAC+TGG - chr6.3:72226157-72226176 None:intergenic 55.0%
AGCCGCGATATAGGGTTCAG+TGG - chr6.3:72225095-72225114 None:intergenic 55.0%
CCCACTTGGGTTTGGCTAAG+TGG + chr6.3:72224569-72224588 MS.gene37750:intron 55.0%
CGCCACTGAACCCTATATCG+CGG + chr6.3:72225090-72225109 MS.gene37750:CDS 55.0%
CGCGATATAGGGTTCAGTGG+CGG - chr6.3:72225092-72225111 None:intergenic 55.0%
GAATCGAACCTGAGACCTCG+AGG - chr6.3:72224626-72224645 None:intergenic 55.0%
GAGACTACCCTAGCTCCATG+CGG + chr6.3:72226229-72226248 MS.gene37750:CDS 55.0%
GCACATACCGTTGGGCCAAT+AGG - chr6.3:72227622-72227641 None:intergenic 55.0%
GCATGCTTGGCAAAGCTCCA+TGG - chr6.3:72224998-72225017 None:intergenic 55.0%
TCCCTTTGCACACCTTGTGC+AGG + chr6.3:72223315-72223334 MS.gene37750:intron 55.0%
TTCCTTAACCAGTGCTCCGG+AGG + chr6.3:72226146-72226165 MS.gene37750:intron 55.0%
! GAAGGTGCAGCCAATGTTGG+TGG + chr6.3:72223681-72223700 MS.gene37750:CDS 55.0%
! TTCAGTGGCGGAATCTCCAC+CGG - chr6.3:72225080-72225099 None:intergenic 55.0%
!! GCAGCCAATGTTGGTGGCAA+AGG + chr6.3:72223687-72223706 MS.gene37750:CDS 55.0%
!! GTGGTAATTGGCTTGGGACC+TGG + chr6.3:72224588-72224607 MS.gene37750:intron 55.0%
!! TACCTCCGGAGCACTGGTTA+AGG - chr6.3:72226151-72226170 None:intergenic 55.0%
ACCAAGGACCGCATGGAGCT+AGG - chr6.3:72226240-72226259 None:intergenic 60.0%
ACTCCCTACCAAGGACCGCA+TGG - chr6.3:72226247-72226266 None:intergenic 60.0%
AGCTCCATGCGGTCCTTGGT+AGG + chr6.3:72226240-72226259 MS.gene37750:CDS 60.0%
ATGCTCCTCCTCGAGGTCTC+AGG + chr6.3:72224615-72224634 MS.gene37750:intron 60.0%
CACCTGGTCGATGTTCACCC+TGG + chr6.3:72225038-72225057 MS.gene37750:CDS 60.0%
CCAAGGACCGCATGGAGCTA+GGG - chr6.3:72226239-72226258 None:intergenic 60.0%
GCTCCATGCGGTCCTTGGTA+GGG + chr6.3:72226241-72226260 MS.gene37750:CDS 60.0%
GGCGTCTAGGCTCTTCTGGA+GGG + chr6.3:72227261-72227280 MS.gene37750:intron 60.0%
TCGAACCTGAGACCTCGAGG+AGG - chr6.3:72224623-72224642 None:intergenic 60.0%
TGCCAGGGTGAACATCGACC+AGG - chr6.3:72225043-72225062 None:intergenic 60.0%
! TCGAGGAGGAGCATACTCCC+AGG - chr6.3:72224609-72224628 None:intergenic 60.0%
! TGGGAGTATGCTCCTCCTCG+AGG + chr6.3:72224608-72224627 MS.gene37750:intron 60.0%
CCCTAGCTCCATGCGGTCCT+TGG + chr6.3:72226236-72226255 MS.gene37750:CDS 65.0%
GACTGTTGAGGCGGCGCCTT+TGG + chr6.3:72227204-72227223 MS.gene37750:intron 65.0%
GGGCGTCTAGGCTCTTCTGG+AGG + chr6.3:72227260-72227279 MS.gene37750:intron 65.0%
GTTGAGGCGGCGCCTTTGGA+GGG + chr6.3:72227208-72227227 MS.gene37750:intron 65.0%
TGTTGAGGCGGCGCCTTTGG+AGG + chr6.3:72227207-72227226 MS.gene37750:intron 65.0%
! TTGAGGCGGCGCCTTTGGAG+GGG + chr6.3:72227209-72227228 MS.gene37750:intron 65.0%
!! GGAGGGCGTCTAGGCTCTTC+TGG + chr6.3:72227257-72227276 MS.gene37750:intron 65.0%
CCTAGGCCTCAGGGGCCTTC+GGG + chr6.3:72227236-72227255 MS.gene37750:intron 70.0%
GAGCCTAGACGCCCTCCCGA+AGG - chr6.3:72227254-72227273 None:intergenic 70.0%
GCCTAGGCACGCCCCTCCAA+AGG - chr6.3:72227223-72227242 None:intergenic 70.0%
GCCTAGGCCTCAGGGGCCTT+CGG + chr6.3:72227235-72227254 MS.gene37750:intron 70.0%
GGCGCTCTCCAGAAGGGCCT+AGG - chr6.3:72227289-72227308 None:intergenic 70.0%
! AGGGGCGTGCCTAGGCCTCA+GGG + chr6.3:72227227-72227246 MS.gene37750:intron 70.0%
! GCCTTTGGAGGGGCGTGCCT+AGG + chr6.3:72227219-72227238 MS.gene37750:intron 70.0%
!! GGCTCTTCTGGAGGGCGCCT+AGG + chr6.3:72227269-72227288 MS.gene37750:intron 70.0%
AGGCCTCAGGGGCCTTCGGG+AGG + chr6.3:72227239-72227258 MS.gene37750:intron 75.0%
CCCGAAGGCCCCTGAGGCCT+AGG - chr6.3:72227239-72227258 None:intergenic 75.0%
GGCCTCAGGGGCCTTCGGGA+GGG + chr6.3:72227240-72227259 MS.gene37750:intron 75.0%
GGGGCGTGCCTAGGCCTCAG+GGG + chr6.3:72227228-72227247 MS.gene37750:intron 75.0%
! GAGGGGCGTGCCTAGGCCTC+AGG + chr6.3:72227226-72227245 MS.gene37750:intron 75.0%
!! GGAGGGCGCCTAGGCCCTTC+TGG + chr6.3:72227278-72227297 MS.gene37750:intron 75.0%
!! GGGCCTTCGGGAGGGCGTCT+AGG + chr6.3:72227248-72227267 MS.gene37750:intron 75.0%
! CGCCCTCCCGAAGGCCCCTG+AGG - chr6.3:72227245-72227264 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr6.3 gene 72223010 72228684 72223010 ID=MS.gene37750
chr6.3 mRNA 72223010 72228684 72223010 ID=MS.gene37750.t1;Parent=MS.gene37750
chr6.3 exon 72223010 72223171 72223010 ID=MS.gene37750.t1.exon1;Parent=MS.gene37750.t1
chr6.3 CDS 72223010 72223171 72223010 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72223678 72223747 72223678 ID=MS.gene37750.t1.exon2;Parent=MS.gene37750.t1
chr6.3 CDS 72223678 72223747 72223678 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72223909 72223967 72223909 ID=MS.gene37750.t1.exon3;Parent=MS.gene37750.t1
chr6.3 CDS 72223909 72223967 72223909 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72224110 72224185 72224110 ID=MS.gene37750.t1.exon4;Parent=MS.gene37750.t1
chr6.3 CDS 72224110 72224185 72224110 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72224462 72224539 72224462 ID=MS.gene37750.t1.exon5;Parent=MS.gene37750.t1
chr6.3 CDS 72224462 72224539 72224462 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72224735 72224822 72224735 ID=MS.gene37750.t1.exon6;Parent=MS.gene37750.t1
chr6.3 CDS 72224735 72224822 72224735 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72224916 72225171 72224916 ID=MS.gene37750.t1.exon7;Parent=MS.gene37750.t1
chr6.3 CDS 72224916 72225171 72224916 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72225881 72225996 72225881 ID=MS.gene37750.t1.exon8;Parent=MS.gene37750.t1
chr6.3 CDS 72225881 72225996 72225881 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72226206 72226423 72226206 ID=MS.gene37750.t1.exon9;Parent=MS.gene37750.t1
chr6.3 CDS 72226206 72226423 72226206 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72227602 72227633 72227602 ID=MS.gene37750.t1.exon10;Parent=MS.gene37750.t1
chr6.3 CDS 72227602 72227633 72227602 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72227777 72227879 72227777 ID=MS.gene37750.t1.exon11;Parent=MS.gene37750.t1
chr6.3 CDS 72227777 72227879 72227777 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72228123 72228231 72228123 ID=MS.gene37750.t1.exon12;Parent=MS.gene37750.t1
chr6.3 CDS 72228123 72228231 72228123 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
chr6.3 exon 72228489 72228684 72228489 ID=MS.gene37750.t1.exon13;Parent=MS.gene37750.t1
chr6.3 CDS 72228489 72228684 72228489 ID=cds.MS.gene37750.t1;Parent=MS.gene37750.t1
Gene Sequence

>MS.gene37750

ATGGCACTAAATGTTCTTCTTCTTTCTGGAATTGTTGTGATTCTTAACTCTTTGGCTATAATTGATGCTACAATATTGTTAACCAATGATATTAGCAAGTCCCTCAACCGAAGTAGTTTCCCACAAGGTTTTATTTTTGGAACATCTTCCTCTGCATATCAGGTGCTCCAAATATTTCAATATTCTTTTACTATTATTTGAATATGTAATTAAAATGTAATATGACAAATATATCACTAACTAGAAAGAGTCAAATAAAAAAATGAAATCCATCTCTTATTCAGTGTTATACTTTTTGGTGCTTCTCCCTTTGCACACCTTGTGCAGGTTGAAGCACTCTGGTTTAATTGATATCTCATTTTGATTTGTTCAAAAAAAAAGAAATATTATAAAAATTATACATTTTTCTGTCTCAAATTTCTCTTGCTAATTTATGTTTCTATTTCTATTTGTTAAGATATATTATAATTCTCTATTTATTGTAATTATATTGTAATTATGTTAGAAATAATTAGTTTTTATGTATAATTACTTTTTCTGTTTCTTTGTCTCCAATCCTATAATATAAATAGGACAACTTTCTTGTACTTGAAACACACAATGAATATACAAACATTTTCTTATATGTTTATGAGTTTCTACACTATTAATTCAATCAACAAATTTAGTATGAAGGTGCAGCCAATGTTGGTGGCAAAGGACCAAGTATATGGGATACTTTCACACATAATTATCCAGGTCTTTTTCCTTTTTTATTTTATTTTATGAAGTATTATGGTTTTTTTCACCGGATCTAACTCACATAAACTTCTTTCAGTAAAAAAGAAGTTTGTATTAATTCTACATTCATACTATGTTTGGCTGAAAACACCAACAAATTTTGTTGCATAACTTTACAGGTAAGATAAAGGACAAAAGTAATGGAGATATAGCCGTTGATCAATACCATCGTTATAAGGTTCAATACTAAGCTCTAATATGTTACCATGATGTTTTAACTTCTGTGTTATTAACATTAATACAATAATTTGCTCAATTTTTTTTTAATATAATAATAAAATATGCTAGATCATAGTTGCGACATTTCTGATATAATGCAGGAAGATGTTGTAATGATGAAGGACATCAATATGGATGCTTATAGATTTTCAATCTCTTGGTCCAGAATACTACCAAGTAAGAAAGGGAAACTAGGACTAAGAAACCTTTTTTTTTAAAAAACTTTTGAACATTTGCTTTGCTTAAGATAAAAAGTTTTTATTTTATTTTTATTTTAAGGTGTGTTTAATTGTTAACTCTTACCTCTCAAAAAATACTGTTAACTTTTAAAAAATATATAATGGTGTATCCTTACTATTTTTAATAAAGTTCATCTTTAAATCAAGTCCATATTAGAAGCCCTATAACTTTCAATCAATAAATTTACATGTTAAATTCCTTTACTAATTGCAGAAGGAAAGATTGGTGGAGGTGTAAATAAGGAAGGAATCAACTATTACAACAATCTCATCAATGAGCTTCTGGCCAAGGGTAATAATCTTCATTTAATGATTTTTGAACCCACTTGGGTTTGGCTAAGTGGTAATTGGCTTGGGACCTGGGAGTATGCTCCTCCTCGAGGTCTCAGGTTCGATTCTCTCCGGTGCAATTTGAGTGAGCTAATTTAGTTTCTTCAAAAGAAAAATGATTTTTGTCTAAAATACTTCAATTGCTATGTCAATGTAGGTCTTCAACCCTTTGTGACCCTTTTTCATTGGGACCTTCCTCAAACTCTTGAAGAAGAATATGGTGGATTTTTGAGTCATAATATCGTGTAATTCACATCTCATATCACCAAAGATAATCAAATATCATAAAGTCAGGTATATCATCATATGTTTTTTCCTCTAACTATCACTATATCCAGGAATGACTTTCAAGACTATTCAGAACTTTGTTTTAAAGAATTTGGAGATAGAGTAAAGCATTGGATCACATTGAATGAACCATGGAGCTTTGCCAAGCATGCTTATGCTGATGGAAAGTTAGCACCTGGTCGATGTTCACCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCCGCCACTGAACCCTATATCGCGGCTCATAATCAAATACTTGCTCATGCATCTGCTGTCAATGTCTACAAAACTAAGTATCAGGTTTGAATTTATTTTAATTAAATCAATTCTCGTACGTAGTGTATGTCTTAGATTTTGATGTCTACTCAAATGGCAAGGTAGGGTTTGTACTTTTCTCTAATACGTCCCCTTTATGCTTTGGCTAGCTATTGAGTTATGCGCTATATATGATAGTATATGATAGGTTTTCAAGTTTAGATTGACACGAAATCAATCAACATTACTAGTTTATATAGTAAGAGCATGTCGAGTGTCATAGATATTTCTATAAGTTGATGAACTGTATCTTAATTTTCCAATCCATTGAAGGAGTTTAACGTGCCAAAGTGGTTAGCATAAAAATTGCTGAAGTATTTTAAATAAGATATTATATCATAGAAATTAATCAACTAATGTTTAACTTTATGACAATATTGAGTAGAAATAAAAAAATATAAAAATGTGACTTGCTTAAGAGTTGCATAATTATTTACAATTGAAGCTAAATATGTATGAGTTGCATCAGGATGACGTGGCATTGTGGGACTATCTCTTAGTAGTTTATGAAACCCAAAATAAACTCCTTAAAAAATAACCATTGAAGATGCTCTACTCTAAGGGTTGCCAGCCACTTAATTAAGGCTATTCTTTATACTTAAGTTTTTTTTATTCCAATACTATATGTATTTCTTCATCAATTAATATCCATATTCACTATTGATACCTTATTTTCTTTACTTTGTGTACACAGACATCTCAACAGGGCAAGATAGGGATAACATTAATGTGTCAGTGGATGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAACTACTTTATGAACCATAAATTATATGTGAAACTCAACTATATATAGTAGCAATTATGCAAGACATTAAACTCTTTTAAAGGAGAAGCCTAAACATAAAATAATGTAACTTCATTGTTGACATTTTCAATTACTATATTTGTTTCCTTAACCAGTGCTCCGGAGGTATCGATTAACATTTCTTTTTAAAAAATGTATTGTAGGTTTATGGATCCATTGACAATAGGAGACTACCCTAGCTCCATGCGGTCCTTGGTAGGGAGTCGATTACCAAAGTTTTCTACATATCAAGTAAAGCTTGTAAGAGGGTCCTTTGATTTTATCGGATTAAACTATTATACTTCCCATTATGCAACTAATGCACCCGAGTTAAGTGAAGCCAAACCCAGCTACATCACAGATTCACTTGTTATTCTTACAAGTAAGTGTCTTATAGTGATGATATTTTCCATTAATATTAATAATACAGTAGAATACACCTTAGTTTAACACACAGCAAGGTTTATTATACTATCACATCTTAAATGTGTGACACTCTAATGCATCAATTAATTCAATTTAAAGCAAAAAATAATCATACCTCTGCAAGTGTGAGTAATAAGTCTCATATTGGATAGAAAAGTGGAGGTTGAACACTTTATAAGTGAGAGAGGACCCATAAAATAAGTGGTTAATGTTTTACGTTTTGATGGTTAGTAGGGTATATGTTTTATGTTTTCATGGTTAGTGGGGTATTCTAAATTGTTAATTAAATACATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTTTGTTAATTAAATAGATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTTTGTTAATTAAATAGATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTAATGGTGTAGTGAAAGTTTTTAATGCCATTATTTTTGTACTTGCAAAAGTACAATAAAAGAATCTAGGGTTTAGACTGTTTATAAGATGCCTTGAGAATTTTTTTGAATCGGCAAAATTTGATTAAAACCGAAACACATGAAAGACGCAATGAGGCGGTGAAACAACAATACAAAGATGCCTTGAGAATGATCCCAACAGTGGTATTTATAACCCTCTGTGGACTTGTTTTTGCTTGACTTAAGCCCTAAGCAAGTTGTGCTTTAAGTCTTTTCATTGACTTCTAGAAGCTTTTAGGAGACTGTTGAGGCGGCGCCTTTGGAGGGGCGTGCCTAGGCCTCAGGGGCCTTCGGGAGGGCGTCTAGGCTCTTCTGGAGGGCGCCTAGGCCCTTCTGGAGAGCGCCTAGGCCCTTAGGAGTAGATTGACGGTTCAATTTTGTTTTTGTGTTATGAAAGTTCTCCAATATTAAAAAAAACGACAAAAAAAAGTATTGTTCATATGTATATGTGTAAAAAGTTGTGTTAGAATAAATGTTGTTTTTAATAATTATTAACTAGCTAGTAGGAGGAAAATTTGGGTGAACATATGAGTATGGGAATAAATTTGAGCGACATGTAACAACTAAATTTAGTGTAAGCAACCACATATATTTATGTTAACAATTGACTATTATGTAATTTTTTTTTTTTTTTACAGACAAGCGCAATGGAATACCTATTGGCCCAACGGTATGTGCGTGATAATTAAGTTGTAAACCTAATGTTTTTACATTTTAATTACAAACAATATATAATGCTTATTTCAATTAGGTTTTCATTTTATATTTTTTTGGACTTCGTTGACATAAAAGGAACCTATATTACACATGCAGGCAGCTTCAAAATGGTTATCAATTTATCCAAAGGGAATTCATGACCTATTGCTCTACATTAAAATAAAGTACAACAACCCGTTGATCTATGTCACTGAAAATGGTAATTCTAATACACCAACTAGATTTACTTTCAATCTATATCTTTAAGGTGCCAAAGTTAAGCATTGGTTTATACTCAAATTTAGATATGAAATGTACGTTAGTCGCAGTTATTTCTTTCTAATATACTCCATCCGTTCCTGTATGTAAGCACCCTTTGCATATAATAAAATGGTGCTTAGATATAGGGACAGAGGGAGTACAATTTTATTGTAAACACATTATATTGTGAATTTATATATAGGTATGGATGAGTTTAATGATCCAACACTCCCTCTTGAGAAAGCCCTTGAAGACACACAAAGGATTGATTACTATCATGGTCATCTCTACTATCTTCAAACTGCAATAAAGTATGTGCCCTCAAATAAAAAACTTTGCATCGAAAAAAATAAATTAACGATAGTAATGTATATAAAGAACAAGAATATAAATTGTCTCTAATTCTCTCATTAACTTTTTTTAATGGCTAATTTAGTGACACATTTTTTTTTTCTTTTCTACATAGCAATTAAGTTACTAATAATTTTATTTCTGTTTAGTGTAATTTCCTTTTTTTTTTAATTTTATCTAATTAATATATATGTTTAATGTATCAAAATTTTACAAGGAATGGAGCGAATGTGAAAGGGTACTTTGCATGGTCATTGATTGACAACTTTGAATGGACTTCAGGCTACACTTCAAGGTTTGGAATATACTTTGTAGATTATAACAATGACCTCAAAAGATATCCAAAAATATCAGCCATTTGGTTTAAGGATTTCCTACAACATAGAACAGTTACAAATAGTGATTCACGCTGA
Protein sequence

>MS.gene37750.t1

MALNVLLLSGIVVILNSLAIIDATILLTNDISKSLNRSSFPQGFIFGTSSSAYQYEGAANVGGKGPSIWDTFTHNYPGKIKDKSNGDIAVDQYHRYKEDVVMMKDINMDAYRFSISWSRILPKGKIGGGVNKEGINYYNNLINELLAKGLQPFVTLFHWDLPQTLEEEYGGFLSHNIVNDFQDYSELCFKEFGDRVKHWITLNEPWSFAKHAYADGKLAPGRCSPWQNLNCTGGDSATEPYIAAHNQILAHASAVNVYKTKYQTSQQGKIGITLMCQWMVPLYDTKLDHHASQRAIDFMFGWFMDPLTIGDYPSSMRSLVGSRLPKFSTYQVKLVRGSFDFIGLNYYTSHYATNAPELSEAKPSYITDSLVILTNKRNGIPIGPTAASKWLSIYPKGIHDLLLYIKIKYNNPLIYVTENGMDEFNDPTLPLEKALEDTQRIDYYHGHLYYLQTAIKNGANVKGYFAWSLIDNFEWTSGYTSRFGIYFVDYNNDLKRYPKISAIWFKDFLQHRTVTNSDSR