Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37848.t1 | XP_003617061.1 | 98.8 | 407 | 5 | 0 | 1 | 407 | 1 | 407 | 2.70E-218 | 767.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37848.t1 | Q9SRV1 | 72.7 | 377 | 101 | 2 | 30 | 404 | 45 | 421 | 6.0e-158 | 558.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37848.t1 | G7KHG8 | 98.8 | 407 | 5 | 0 | 1 | 407 | 1 | 407 | 2.0e-218 | 767.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051019 | MS.gene37848 | 0.806852 | 6.73E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene37848 | 0.803463 | 3.44E-49 | -1.69E-46 |
| MS.gene053272 | MS.gene37848 | -0.832642 | 8.41E-56 | -1.69E-46 |
| MS.gene053427 | MS.gene37848 | 0.825731 | 3.99E-54 | -1.69E-46 |
| MS.gene056363 | MS.gene37848 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene37848 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene37848 | 0.834289 | 3.27E-56 | -1.69E-46 |
| MS.gene057102 | MS.gene37848 | 0.83199 | 1.22E-55 | -1.69E-46 |
| MS.gene057174 | MS.gene37848 | 0.809556 | 1.78E-50 | -1.69E-46 |
| MS.gene058781 | MS.gene37848 | 0.815739 | 7.92E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene37848 | 0.814865 | 1.24E-51 | -1.69E-46 |
| MS.gene05985 | MS.gene37848 | -0.832099 | 1.15E-55 | -1.69E-46 |
| MS.gene060522 | MS.gene37848 | 0.808744 | 2.67E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene37848 | 0.809484 | 1.85E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene37848 | 0.843602 | 1.27E-58 | -1.69E-46 |
| MS.gene060937 | MS.gene37848 | 0.846884 | 1.64E-59 | -1.69E-46 |
| MS.gene061188 | MS.gene37848 | 0.806864 | 6.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37848.t1 | MTR_5g087500 | 98.771 | 407 | 5 | 0 | 1 | 407 | 1 | 407 | 0.0 | 841 |
| MS.gene37848.t1 | MTR_5g087500 | 98.271 | 347 | 6 | 0 | 1 | 347 | 1 | 347 | 0.0 | 712 |
| MS.gene37848.t1 | MTR_5g087500 | 98.271 | 347 | 6 | 0 | 1 | 347 | 1 | 347 | 0.0 | 712 |
| MS.gene37848.t1 | MTR_7g086500 | 72.441 | 381 | 104 | 1 | 26 | 406 | 13 | 392 | 0.0 | 549 |
| MS.gene37848.t1 | MTR_7g086500 | 74.375 | 320 | 82 | 0 | 26 | 345 | 13 | 332 | 8.26e-172 | 484 |
| MS.gene37848.t1 | MTR_7g094490 | 59.162 | 382 | 143 | 6 | 30 | 406 | 36 | 409 | 7.58e-159 | 453 |
| MS.gene37848.t1 | MTR_1g072650 | 58.268 | 381 | 146 | 6 | 31 | 406 | 41 | 413 | 1.80e-152 | 437 |
| MS.gene37848.t1 | MTR_4g009630 | 75.824 | 182 | 44 | 0 | 29 | 210 | 23 | 204 | 3.66e-100 | 302 |
| MS.gene37848.t1 | MTR_4g009630 | 75.824 | 182 | 44 | 0 | 29 | 210 | 23 | 204 | 7.54e-99 | 300 |
| MS.gene37848.t1 | MTR_3g069000 | 42.021 | 188 | 103 | 3 | 194 | 378 | 51 | 235 | 1.43e-41 | 148 |
| MS.gene37848.t1 | MTR_5g005940 | 31.447 | 159 | 88 | 5 | 183 | 339 | 521 | 660 | 4.08e-14 | 74.7 |
| MS.gene37848.t1 | MTR_7g094900 | 28.022 | 182 | 100 | 6 | 183 | 362 | 530 | 682 | 5.59e-14 | 74.3 |
| MS.gene37848.t1 | MTR_7g094910 | 27.473 | 182 | 101 | 6 | 183 | 362 | 511 | 663 | 9.57e-14 | 73.6 |
| MS.gene37848.t1 | MTR_1g104870 | 30.818 | 159 | 89 | 5 | 183 | 339 | 524 | 663 | 2.22e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37848.t1 | AT3G03740 | 71.139 | 395 | 108 | 3 | 12 | 404 | 31 | 421 | 0.0 | 574 |
| MS.gene37848.t1 | AT5G21010 | 68.672 | 399 | 120 | 3 | 13 | 406 | 10 | 408 | 0.0 | 557 |
| MS.gene37848.t1 | AT3G43700 | 66.015 | 409 | 136 | 1 | 1 | 406 | 5 | 413 | 0.0 | 550 |
| MS.gene37848.t1 | AT3G43700 | 66.193 | 352 | 116 | 1 | 1 | 349 | 5 | 356 | 6.58e-174 | 490 |
| MS.gene37848.t1 | AT3G43700 | 66.954 | 348 | 112 | 1 | 1 | 345 | 5 | 352 | 3.59e-173 | 488 |
| MS.gene37848.t1 | AT3G06190 | 55.746 | 409 | 170 | 5 | 2 | 406 | 3 | 404 | 8.89e-157 | 448 |
| MS.gene37848.t1 | AT5G19000 | 56.430 | 381 | 155 | 5 | 30 | 406 | 32 | 405 | 7.63e-149 | 428 |
| MS.gene37848.t1 | AT5G19000 | 56.430 | 381 | 155 | 5 | 30 | 406 | 32 | 405 | 7.63e-149 | 428 |
| MS.gene37848.t1 | AT2G39760 | 54.872 | 390 | 168 | 5 | 21 | 406 | 14 | 399 | 2.45e-148 | 427 |
| MS.gene37848.t1 | AT5G19000 | 51.683 | 416 | 155 | 6 | 30 | 406 | 32 | 440 | 1.89e-141 | 410 |
| MS.gene37848.t1 | AT3G06190 | 58.529 | 340 | 135 | 3 | 2 | 339 | 3 | 338 | 3.94e-140 | 404 |
| MS.gene37848.t1 | AT2G39760 | 57.764 | 322 | 132 | 2 | 21 | 341 | 14 | 332 | 2.15e-133 | 386 |
| MS.gene37848.t1 | AT2G39760 | 57.764 | 322 | 132 | 2 | 21 | 341 | 14 | 332 | 2.15e-133 | 386 |
| MS.gene37848.t1 | AT2G39760 | 57.764 | 322 | 132 | 2 | 21 | 341 | 14 | 332 | 3.55e-133 | 386 |
| MS.gene37848.t1 | AT3G06190 | 61.961 | 255 | 96 | 1 | 2 | 255 | 3 | 257 | 3.51e-109 | 323 |
| MS.gene37848.t1 | AT3G06190 | 61.961 | 255 | 96 | 1 | 2 | 255 | 3 | 257 | 3.60e-109 | 323 |
| MS.gene37848.t1 | AT3G06190 | 59.770 | 261 | 103 | 1 | 2 | 260 | 3 | 263 | 4.56e-108 | 320 |
| MS.gene37848.t1 | AT5G19330 | 31.088 | 193 | 105 | 7 | 195 | 385 | 535 | 701 | 2.80e-16 | 81.3 |
| MS.gene37848.t1 | AT5G13060 | 28.571 | 175 | 106 | 4 | 194 | 365 | 561 | 719 | 8.58e-13 | 70.5 |
| MS.gene37848.t1 | AT3G56230 | 28.834 | 163 | 101 | 4 | 209 | 369 | 121 | 270 | 5.00e-11 | 63.5 |
Find 97 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTATACCTTGAAATATA+AGG | 0.259361 | 5.3:+70316872 | MS.gene37848:CDS |
| CCCTTATATTTCAAGGTATA+AGG | 0.262839 | 5.3:-70316873 | None:intergenic |
| TGTCGGAGATGATGCGTTTC+CGG | 0.295840 | 5.3:-70316499 | None:intergenic |
| ATCACACTTTGGTGCACTAT+TGG | 0.301896 | 5.3:+70318372 | MS.gene37848:CDS |
| TGTGATCCAATGTCAGATTC+TGG | 0.306920 | 5.3:-70318355 | None:intergenic |
| GGATAATTCTGCGTATGTTT+CGG | 0.314889 | 5.3:+70316725 | MS.gene37848:CDS |
| GCTATCAACGTCTCCGAAAC+TGG | 0.316312 | 5.3:-70318857 | None:intergenic |
| TTATCGAGCGCGAGATCGTT+GGG | 0.358029 | 5.3:-70316551 | None:intergenic |
| TACTCGCTCGCGAAGGGAAT+GGG | 0.383641 | 5.3:+70316615 | MS.gene37848:CDS |
| CATGCTACCCTTATATTTCA+AGG | 0.389146 | 5.3:-70316880 | None:intergenic |
| TTAGCTGCAGCAGACAAGTA+TGG | 0.390342 | 5.3:+70318887 | MS.gene37848:CDS |
| GAGATCTTGAAGACAGTTGC+TGG | 0.421772 | 5.3:+70320784 | MS.gene37848:CDS |
| TCGATAACGCAAACGGTTAA+CGG | 0.437798 | 5.3:+70316567 | MS.gene37848:CDS |
| TCAGATGGTGGTGACACAAT+TGG | 0.443947 | 5.3:+70320865 | MS.gene37848:CDS |
| AGATGATGCGTTTCCGGTCA+TGG | 0.446701 | 5.3:-70316493 | None:intergenic |
| GTCACCACCATCTGAAAGTT+GGG | 0.448909 | 5.3:-70320857 | None:intergenic |
| GTGGCTGGGGAGAAGTTTCC+TGG | 0.449811 | 5.3:+70318427 | MS.gene37848:CDS |
| TTTCAAGAGAGCGATCAAAA+TGG | 0.451722 | 5.3:-70316845 | None:intergenic |
| CCATGTCCACCTCTTCTGTA+AGG | 0.453653 | 5.3:-70318808 | None:intergenic |
| CCTTATACCTTGAAATATAA+GGG | 0.454581 | 5.3:+70316873 | MS.gene37848:CDS |
| GCTTGTTGATCAGAGTGGTC+AGG | 0.473140 | 5.3:+70316803 | MS.gene37848:CDS |
| TCCTCCGGATTCTTCCCATC+AGG | 0.473218 | 5.3:-70316705 | None:intergenic |
| CCTTCGCGAGCGAGTACCCT+TGG | 0.474161 | 5.3:-70316608 | None:intergenic |
| GAGGGTGATAGTTGCAGTAC+AGG | 0.482747 | 5.3:+70320811 | MS.gene37848:CDS |
| TCCTGGTCATAAGTTGGTGT+TGG | 0.483144 | 5.3:+70318444 | MS.gene37848:CDS |
| GTGATCCAATGTCAGATTCT+GGG | 0.484115 | 5.3:-70318354 | None:intergenic |
| TGTCACCACCATCTGAAAGT+TGG | 0.485682 | 5.3:-70320858 | None:intergenic |
| CTCGCGAAGGGAATGGGAGT+TGG | 0.488059 | 5.3:+70316621 | MS.gene37848:CDS |
| CTATCCTGATGGGAAGAATC+CGG | 0.493996 | 5.3:+70316701 | MS.gene37848:CDS |
| TTTGATCGCTCTCTTGAAAG+TGG | 0.498995 | 5.3:+70316849 | MS.gene37848:CDS |
| GTACTCGCTCGCGAAGGGAA+TGG | 0.499540 | 5.3:+70316614 | MS.gene37848:CDS |
| AAATAAACAACCGCCATGAC+CGG | 0.506651 | 5.3:+70316480 | None:intergenic |
| CAACTGTACAGTTGGAGTTG+TGG | 0.508711 | 5.3:+70318291 | MS.gene37848:CDS |
| TCGCACAAATTCTTGATCCA+AGG | 0.511740 | 5.3:+70316591 | MS.gene37848:CDS |
| AAGACAGTTGCTGGCTGTGA+GGG | 0.511783 | 5.3:+70320793 | MS.gene37848:CDS |
| GAGGATAACGGCGCCGGTGA+CGG | 0.513532 | 5.3:-70316528 | None:intergenic |
| TTGAAAATCAACTGTACAGT+TGG | 0.516183 | 5.3:+70318283 | MS.gene37848:CDS |
| GTTATCGAGCGCGAGATCGT+TGG | 0.516701 | 5.3:-70316552 | None:intergenic |
| TTCATCGCGTTGGCGAGTGA+AGG | 0.518184 | 5.3:+70316750 | MS.gene37848:CDS |
| GAGTGGTCAGGGGAAGCATA+AGG | 0.519043 | 5.3:+70316815 | MS.gene37848:CDS |
| GCGATCTACTTCTATCCTGA+TGG | 0.520478 | 5.3:+70316690 | MS.gene37848:CDS |
| AAGATCTCTGACTGTAGCCA+TGG | 0.528447 | 5.3:-70320769 | None:intergenic |
| TTAACTCTGTGGCATGGCAA+TGG | 0.529102 | 5.3:-70318997 | None:intergenic |
| GAGATCGTTGGGGAGGATAA+CGG | 0.531477 | 5.3:-70316540 | None:intergenic |
| CCTTACAGAAGAGGTGGACA+TGG | 0.531958 | 5.3:+70318808 | MS.gene37848:CDS |
| TCCGACACCATCACCGTCAC+CGG | 0.533301 | 5.3:+70316515 | MS.gene37848:CDS |
| TCTGACATTGGATCACACTT+TGG | 0.535953 | 5.3:+70318361 | MS.gene37848:CDS |
| GAAGTTTCCTGGTCATAAGT+TGG | 0.536194 | 5.3:+70318438 | MS.gene37848:CDS |
| CTTGTTGATCAGAGTGGTCA+GGG | 0.537245 | 5.3:+70316804 | MS.gene37848:CDS |
| CGCGTTGGCGAGTGAAGGAA+CGG | 0.541562 | 5.3:+70316755 | MS.gene37848:CDS |
| TGCAGCAGACAAGTATGGCT+TGG | 0.543450 | 5.3:+70318892 | MS.gene37848:CDS |
| GCACTATTGGAGAATAATGA+AGG | 0.550810 | 5.3:+70318385 | MS.gene37848:CDS |
| AACGGCGCCGGTGACGGTGA+TGG | 0.554496 | 5.3:-70316522 | None:intergenic |
| TTTGCTTCTCAAAATCTAGC+CGG | 0.554738 | 5.3:+70319037 | MS.gene37848:CDS |
| CGCACAAATTCTTGATCCAA+GGG | 0.554858 | 5.3:+70316592 | MS.gene37848:CDS |
| AGGGTGATAGTTGCAGTACA+GGG | 0.557225 | 5.3:+70320812 | MS.gene37848:CDS |
| TCTCGTCTTTGCAAGGACAT+TGG | 0.559559 | 5.3:+70318938 | MS.gene37848:CDS |
| TCACCGTCGGAGGGTATCAG+TGG | 0.564407 | 5.3:+70316667 | MS.gene37848:CDS |
| CTCGCGCTCGATAACGCAAA+CGG | 0.564722 | 5.3:+70316560 | MS.gene37848:CDS |
| CGATCTACTTCTATCCTGAT+GGG | 0.565146 | 5.3:+70316691 | MS.gene37848:CDS |
| GTCAGCCAAGGTCAAAATGT+TGG | 0.566131 | 5.3:-70318975 | None:intergenic |
| GCCGGTGACGGTGATGGTGT+CGG | 0.567480 | 5.3:-70316516 | None:intergenic |
| CAGAGATTCCCTTACAGAAG+AGG | 0.571846 | 5.3:+70318799 | MS.gene37848:CDS |
| GTTGGGGAGGATAACGGCGC+CGG | 0.572963 | 5.3:-70316534 | None:intergenic |
| TGTGACAGATTTAGAACCAA+AGG | 0.576907 | 5.3:+70318534 | MS.gene37848:CDS |
| GAAGACAGTTGCTGGCTGTG+AGG | 0.579653 | 5.3:+70320792 | MS.gene37848:CDS |
| ATGGTGGTGACACAATTGGC+AGG | 0.581902 | 5.3:+70320869 | MS.gene37848:CDS |
| CATGTCCACCTCTTCTGTAA+GGG | 0.584025 | 5.3:-70318807 | None:intergenic |
| CCAAGGGTACTCGCTCGCGA+AGG | 0.588173 | 5.3:+70316608 | MS.gene37848:CDS |
| CATGTCCCAGAATCTGACAT+TGG | 0.590035 | 5.3:+70318349 | MS.gene37848:CDS |
| GTGCGAGTCTCGTCTTTGCA+AGG | 0.590794 | 5.3:+70318931 | MS.gene37848:CDS |
| GCCAACACCAACTTATGACC+AGG | 0.592965 | 5.3:-70318445 | None:intergenic |
| GTGTGGGCCCAACTTTCAGA+TGG | 0.597445 | 5.3:+70320850 | MS.gene37848:CDS |
| CAAGGGTACTCGCTCGCGAA+GGG | 0.597917 | 5.3:+70316609 | MS.gene37848:CDS |
| AGATCTCTGACTGTAGCCAT+GGG | 0.614943 | 5.3:-70320768 | None:intergenic |
| AGATTCCCTTACAGAAGAGG+TGG | 0.616072 | 5.3:+70318802 | MS.gene37848:CDS |
| TGGGCCCAACTTTCAGATGG+TGG | 0.618037 | 5.3:+70320853 | MS.gene37848:CDS |
| ACATGAATAGAGTTAAGCTG+TGG | 0.618655 | 5.3:-70318331 | None:intergenic |
| CACCGTCGGAGGGTATCAGT+GGG | 0.619698 | 5.3:+70316668 | MS.gene37848:CDS |
| GACTTGTTGCAGCTGTCATG+AGG | 0.622166 | 5.3:+70320713 | MS.gene37848:intron |
| TCGAAATTCTGGAGATCTAG+CGG | 0.629987 | 5.3:-70318467 | None:intergenic |
| GCAGCTGTCATGAGGTCGGA+TGG | 0.631226 | 5.3:+70320721 | MS.gene37848:intron |
| TGTTGCAGCTGTCATGAGGT+CGG | 0.632813 | 5.3:+70320717 | MS.gene37848:intron |
| GGCATGGCAATGGTCAGCCA+AGG | 0.641941 | 5.3:-70318987 | None:intergenic |
| ACATACGCAGAATTATCCTC+CGG | 0.650784 | 5.3:-70316720 | None:intergenic |
| TCTGTAGATAAAATGCAGCA+TGG | 0.650987 | 5.3:-70318780 | None:intergenic |
| CGAGCGCGAGATCGTTGGGG+AGG | 0.656980 | 5.3:-70316547 | None:intergenic |
| CAGACAAGTATGGCTTGGAG+AGG | 0.667523 | 5.3:+70318897 | MS.gene37848:CDS |
| CATGAATAGAGTTAAGCTGT+GGG | 0.672460 | 5.3:-70318330 | None:intergenic |
| CTCACGCTTGTTGATCAGAG+TGG | 0.674203 | 5.3:+70316798 | MS.gene37848:CDS |
| TATCGAGCGCGAGATCGTTG+GGG | 0.681767 | 5.3:-70316550 | None:intergenic |
| TGGCACGGATATGGACACAC+AGG | 0.686971 | 5.3:+70318504 | MS.gene37848:CDS |
| CGCCCACTGATACCCTCCGA+CGG | 0.690240 | 5.3:-70316670 | None:intergenic |
| GGGTGATAGTTGCAGTACAG+GGG | 0.705570 | 5.3:+70320813 | MS.gene37848:CDS |
| TGAAATATAAGGGTAGCATG+TGG | 0.707701 | 5.3:+70316883 | MS.gene37848:CDS |
| TCCTGATGGGAAGAATCCGG+AGG | 0.709613 | 5.3:+70316704 | MS.gene37848:CDS |
| TTGTTGATCAGAGTGGTCAG+GGG | 0.711385 | 5.3:+70316805 | MS.gene37848:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACAATATAAATGATAA+AGG | - | chr5.3:70317954-70317973 | None:intergenic | 10.0% |
| !! | TGAAAAAGTAAAAAAAAAAA+TGG | - | chr5.3:70319883-70319902 | None:intergenic | 10.0% |
| !! | AAAGTAAAAAAAAAAATGGA+AGG | - | chr5.3:70319879-70319898 | None:intergenic | 15.0% |
| !! | GAAAAAGTAAAGAAAATTAA+AGG | - | chr5.3:70320131-70320150 | None:intergenic | 15.0% |
| !!! | TAAATTATCATTGATTAAAG+TGG | + | chr5.3:70318018-70318037 | MS.gene37848:intron | 15.0% |
| !!! | TCATTATAACTTTACATTTT+GGG | + | chr5.3:70319321-70319340 | MS.gene37848:intron | 15.0% |
| !!! | TTCATTATAACTTTACATTT+TGG | + | chr5.3:70319320-70319339 | MS.gene37848:intron | 15.0% |
| !!! | TTTCAAATTTTGATTGTTTT+TGG | + | chr5.3:70316924-70316943 | MS.gene37848:intron | 15.0% |
| !! | AAAAATTTAGATCGAAATTC+TGG | - | chr5.3:70318481-70318500 | None:intergenic | 20.0% |
| !! | ATAGTAAATACTAGTAACTA+AGG | - | chr5.3:70319923-70319942 | None:intergenic | 20.0% |
| !! | ATCATTTGTATTCACTATTA+AGG | - | chr5.3:70320466-70320485 | None:intergenic | 20.0% |
| !! | ATTCTCCATAAAGTTATATT+TGG | - | chr5.3:70317599-70317618 | None:intergenic | 20.0% |
| !! | GTATACCAAATATAACTTTA+TGG | + | chr5.3:70317591-70317610 | MS.gene37848:intron | 20.0% |
| !! | TAATAATGCATGATTAAACA+TGG | - | chr5.3:70320616-70320635 | None:intergenic | 20.0% |
| !! | TGATAAGAAAAGATCTTATT+TGG | + | chr5.3:70318703-70318722 | MS.gene37848:intron | 20.0% |
| !! | TGTTTATGTTTCATATATGT+CGG | + | chr5.3:70319439-70319458 | MS.gene37848:intron | 20.0% |
| !!! | ACTTTTCTATTTACCAAAAA+TGG | + | chr5.3:70319962-70319981 | MS.gene37848:intron | 20.0% |
| !!! | AGATGTTTTTTTTCCATTTT+TGG | - | chr5.3:70319721-70319740 | None:intergenic | 20.0% |
| !!! | AGTAATATTATCTCCATTTT+TGG | - | chr5.3:70319978-70319997 | None:intergenic | 20.0% |
| !!! | ATAAGAAAAGATCTTATTTG+GGG | + | chr5.3:70318705-70318724 | MS.gene37848:intron | 20.0% |
| !!! | ATCTAAAATTTCAACACAAA+AGG | - | chr5.3:70320554-70320573 | None:intergenic | 20.0% |
| !!! | ATGAATCATCTTAATGTTTT+AGG | - | chr5.3:70319305-70319324 | None:intergenic | 20.0% |
| !!! | CATTATAACTTTACATTTTG+GGG | + | chr5.3:70319322-70319341 | MS.gene37848:intron | 20.0% |
| !!! | GATAAGAAAAGATCTTATTT+GGG | + | chr5.3:70318704-70318723 | MS.gene37848:intron | 20.0% |
| !!! | GTTTTAAAAAATTGTGAAAG+AGG | + | chr5.3:70317995-70318014 | MS.gene37848:intron | 20.0% |
| !!! | TAAATGATAAAGGCATATTT+TGG | - | chr5.3:70317944-70317963 | None:intergenic | 20.0% |
| !!! | TCATGCATTATTAAAACTTT+TGG | + | chr5.3:70320623-70320642 | MS.gene37848:intron | 20.0% |
| !!! | TCTAAAATTTCAACACAAAA+GGG | - | chr5.3:70320553-70320572 | None:intergenic | 20.0% |
| !!! | TGTGTTGAAATTTTAGATAT+AGG | + | chr5.3:70320556-70320575 | MS.gene37848:intron | 20.0% |
| !!! | TTGAAATTTTAGATATAGGT+TGG | + | chr5.3:70320560-70320579 | MS.gene37848:intron | 20.0% |
| !!! | TTTAATGTTGATGATAGTTA+GGG | + | chr5.3:70316947-70316966 | MS.gene37848:intron | 20.0% |
| !!! | TTTCGATCTAAATTTTTTGA+TGG | + | chr5.3:70318484-70318503 | MS.gene37848:CDS | 20.0% |
| ! | AAAACAAGTGATTAGTAAGT+AGG | - | chr5.3:70319067-70319086 | None:intergenic | 25.0% |
| ! | ACACCATAGATATAAAGTTA+GGG | - | chr5.3:70317787-70317806 | None:intergenic | 25.0% |
| ! | ACGAGTAATGAAAAATACAT+GGG | + | chr5.3:70319513-70319532 | MS.gene37848:intron | 25.0% |
| ! | ATCAATAAAAAAGAAAGTGG+TGG | - | chr5.3:70320325-70320344 | None:intergenic | 25.0% |
| ! | ATGAAAAGAAGATGGTAAAA+GGG | - | chr5.3:70318601-70318620 | None:intergenic | 25.0% |
| ! | CAAAAACTAGAAGAGAAAAA+CGG | - | chr5.3:70320054-70320073 | None:intergenic | 25.0% |
| ! | CCTTATACCTTGAAATATAA+GGG | + | chr5.3:70316873-70316892 | MS.gene37848:CDS | 25.0% |
| ! | CTAAATGTTTCAAAATGCAA+AGG | - | chr5.3:70320260-70320279 | None:intergenic | 25.0% |
| ! | GAAACTATAGATTAATGAGT+AGG | + | chr5.3:70317277-70317296 | MS.gene37848:intron | 25.0% |
| ! | GAAAGAAAATAACAAGAGAA+GGG | - | chr5.3:70320303-70320322 | None:intergenic | 25.0% |
| ! | GCAATCAATAAAAAAGAAAG+TGG | - | chr5.3:70320328-70320347 | None:intergenic | 25.0% |
| ! | GCTTTCTTAATTACCAAAAA+TGG | + | chr5.3:70319705-70319724 | MS.gene37848:intron | 25.0% |
| ! | GTTATGGTAATAAGTAACTA+AGG | - | chr5.3:70319669-70319688 | None:intergenic | 25.0% |
| ! | TAATCTATAGTTTCTCTTAC+AGG | - | chr5.3:70317271-70317290 | None:intergenic | 25.0% |
| ! | TACACCATAGATATAAAGTT+AGG | - | chr5.3:70317788-70317807 | None:intergenic | 25.0% |
| ! | TCCTTATACCTTGAAATATA+AGG | + | chr5.3:70316872-70316891 | MS.gene37848:CDS | 25.0% |
| ! | TTTGAATTTGATGTGAGTTT+GGG | + | chr5.3:70316980-70316999 | MS.gene37848:intron | 25.0% |
| !! | ATTACTCCTTTAAAAGAATG+TGG | + | chr5.3:70317469-70317488 | MS.gene37848:intron | 25.0% |
| !! | ATTCACCTATGTAATGTTTT+TGG | - | chr5.3:70317545-70317564 | None:intergenic | 25.0% |
| !! | GATAAACCACATTCTTTTAA+AGG | - | chr5.3:70317478-70317497 | None:intergenic | 25.0% |
| !! | GTTTTTACCTTAAAAACCTT+TGG | - | chr5.3:70318553-70318572 | None:intergenic | 25.0% |
| !! | TAAATCTTCAAAGCTTTTAC+TGG | + | chr5.3:70319633-70319652 | MS.gene37848:intron | 25.0% |
| !! | TAAGAAAAGATCTTATTTGG+GGG | + | chr5.3:70318706-70318725 | MS.gene37848:intron | 25.0% |
| !! | TTTTCATTACTCGTGTTTAA+TGG | - | chr5.3:70319507-70319526 | None:intergenic | 25.0% |
| !!! | AATTTTAGATATAGGTTGGT+TGG | + | chr5.3:70320564-70320583 | MS.gene37848:intron | 25.0% |
| !!! | ATCTAAATTTTTTGATGGCA+CGG | + | chr5.3:70318489-70318508 | MS.gene37848:CDS | 25.0% |
| !!! | ATGTGGTTTATCTCTTTTTT+TGG | + | chr5.3:70317486-70317505 | MS.gene37848:intron | 25.0% |
| !!! | CTTGTTCATTTGTTTTTGTA+GGG | + | chr5.3:70318198-70318217 | MS.gene37848:intron | 25.0% |
| !!! | GAGCAATTTAGTTTTTTTAG+AGG | + | chr5.3:70317398-70317417 | MS.gene37848:intron | 25.0% |
| !!! | GATTTTGAGAAGCAAATTTT+AGG | - | chr5.3:70319033-70319052 | None:intergenic | 25.0% |
| !!! | GTTTAATGTTGATGATAGTT+AGG | + | chr5.3:70316946-70316965 | MS.gene37848:intron | 25.0% |
| !!! | TCTTGTTCATTTGTTTTTGT+AGG | + | chr5.3:70318197-70318216 | MS.gene37848:intron | 25.0% |
| !!! | TTGTTCATTTGTTTTTGTAG+GGG | + | chr5.3:70318199-70318218 | MS.gene37848:intron | 25.0% |
| !!! | TTTAACTTCCTTTTTTGAAC+AGG | - | chr5.3:70319617-70319636 | None:intergenic | 25.0% |
| !!! | TTTAGAACCAAAGGTTTTTA+AGG | + | chr5.3:70318543-70318562 | MS.gene37848:CDS | 25.0% |
| AAAATCATGTTACACATTGC+AGG | - | chr5.3:70320156-70320175 | None:intergenic | 30.0% | |
| AAAGTCCAAATTATCGAGAA+CGG | - | chr5.3:70320355-70320374 | None:intergenic | 30.0% | |
| AATTCCGTAACTAGTTAGAT+TGG | - | chr5.3:70319366-70319385 | None:intergenic | 30.0% | |
| ACATTTGCAAACTCAAAGAA+CGG | - | chr5.3:70318087-70318106 | None:intergenic | 30.0% | |
| AGACCCTAACTTTATATCTA+TGG | + | chr5.3:70317781-70317800 | MS.gene37848:intron | 30.0% | |
| ATAAGATGGTTCTTATGGTT+TGG | + | chr5.3:70320691-70320710 | MS.gene37848:intron | 30.0% | |
| ATCCAGTAACTAAAATTCAC+AGG | - | chr5.3:70317884-70317903 | None:intergenic | 30.0% | |
| CACGAGTAATGAAAAATACA+TGG | + | chr5.3:70319512-70319531 | MS.gene37848:intron | 30.0% | |
| CATGAAAAGAAGATGGTAAA+AGG | - | chr5.3:70318602-70318621 | None:intergenic | 30.0% | |
| CATTACATAGGTGAATTAGA+AGG | + | chr5.3:70317549-70317568 | MS.gene37848:intron | 30.0% | |
| CCCTTATATTTCAAGGTATA+AGG | - | chr5.3:70316876-70316895 | None:intergenic | 30.0% | |
| CGAAAATAAGTTAAGCGTAA+CGG | + | chr5.3:70317037-70317056 | MS.gene37848:intron | 30.0% | |
| GCTTACCAAAAACATTACAT+AGG | + | chr5.3:70317537-70317556 | MS.gene37848:intron | 30.0% | |
| GGAAAAAAAACATCTGACAT+TGG | + | chr5.3:70319726-70319745 | MS.gene37848:intron | 30.0% | |
| GGAAAGAAAATAACAAGAGA+AGG | - | chr5.3:70320304-70320323 | None:intergenic | 30.0% | |
| GTAAAAGTAAACGGAAAATC+AGG | - | chr5.3:70318757-70318776 | None:intergenic | 30.0% | |
| GTTTGAATTTGATGTGAGTT+TGG | + | chr5.3:70316979-70316998 | MS.gene37848:intron | 30.0% | |
| TAATGACATGGCTAATTCTA+TGG | + | chr5.3:70319385-70319404 | MS.gene37848:intron | 30.0% | |
| TACAACCATATGATACATGA+AGG | + | chr5.3:70317823-70317842 | MS.gene37848:intron | 30.0% | |
| TAGTTACGGAATTAATGACA+TGG | + | chr5.3:70319373-70319392 | MS.gene37848:intron | 30.0% | |
| TGATTAGTAAGTAGGTATAC+CGG | - | chr5.3:70319059-70319078 | None:intergenic | 30.0% | |
| TTGAAAATCAACTGTACAGT+TGG | + | chr5.3:70318283-70318302 | MS.gene37848:CDS | 30.0% | |
| TTGAATTTGATGTGAGTTTG+GGG | + | chr5.3:70316981-70317000 | MS.gene37848:intron | 30.0% | |
| ! | AGAACATTTGAAACACATGA+AGG | - | chr5.3:70319779-70319798 | None:intergenic | 30.0% |
| ! | ATCTAGTGATTTTCCAGTTT+CGG | + | chr5.3:70318844-70318863 | MS.gene37848:CDS | 30.0% |
| ! | ATTTAAAGCATTAGAGAGAG+AGG | + | chr5.3:70317096-70317115 | MS.gene37848:intron | 30.0% |
| ! | CTTTTACCATCTTCTTTTCA+TGG | + | chr5.3:70318600-70318619 | MS.gene37848:intron | 30.0% |
| ! | GAACATTTGAAACACATGAA+GGG | - | chr5.3:70319778-70319797 | None:intergenic | 30.0% |
| ! | TAAACATGGATTTAGAACAG+AGG | - | chr5.3:70320602-70320621 | None:intergenic | 30.0% |
| ! | TATTTTACATCTGTCTCTGA+GGG | + | chr5.3:70318051-70318070 | MS.gene37848:intron | 30.0% |
| ! | TGCAATGTGTAACATGATTT+TGG | + | chr5.3:70320155-70320174 | MS.gene37848:intron | 30.0% |
| ! | TTTAAAGCATTAGAGAGAGA+GGG | + | chr5.3:70317097-70317116 | MS.gene37848:intron | 30.0% |
| ! | TTTCAGTAACAAGTGTTGTA+AGG | - | chr5.3:70319145-70319164 | None:intergenic | 30.0% |
| !! | GATTTTCCGTTTACTTTTAC+AGG | + | chr5.3:70318757-70318776 | MS.gene37848:intron | 30.0% |
| !! | TTATTTTACATCTGTCTCTG+AGG | + | chr5.3:70318050-70318069 | MS.gene37848:intron | 30.0% |
| !! | TTTTCAAGCAATCATTCTTG+AGG | - | chr5.3:70318270-70318289 | None:intergenic | 30.0% |
| !!! | ACTAAGGTTTTTTACATAGC+AGG | - | chr5.3:70319907-70319926 | None:intergenic | 30.0% |
| !!! | ACTAATCACTTGTTTTTGTC+TGG | + | chr5.3:70319071-70319090 | MS.gene37848:intron | 30.0% |
| !!! | TTCAGATGTTACTTTTGATG+TGG | + | chr5.3:70318408-70318427 | MS.gene37848:CDS | 30.0% |
| !!! | TTCCTGTGAATTTTAGTTAC+TGG | + | chr5.3:70317879-70317898 | MS.gene37848:intron | 30.0% |
| AAACATAAACAGTAAACCCC+TGG | - | chr5.3:70319430-70319449 | None:intergenic | 35.0% | |
| AACACCTATCGTAGAAAAGA+CGG | + | chr5.3:70317132-70317151 | MS.gene37848:intron | 35.0% | |
| AACATTTCACGTGATTAGAG+TGG | - | chr5.3:70320084-70320103 | None:intergenic | 35.0% | |
| AAGAGAAAAACGGACACATT+TGG | - | chr5.3:70320044-70320063 | None:intergenic | 35.0% | |
| ACACTACCATGAAAAGAAGA+TGG | - | chr5.3:70318609-70318628 | None:intergenic | 35.0% | |
| ACATGAATAGAGTTAAGCTG+TGG | - | chr5.3:70318334-70318353 | None:intergenic | 35.0% | |
| AGACGGTGAAAACTATGTTT+AGG | + | chr5.3:70317149-70317168 | MS.gene37848:intron | 35.0% | |
| AGCATTTCACATGATTAGAG+TGG | - | chr5.3:70319833-70319852 | None:intergenic | 35.0% | |
| ATGATACATGAAGGCTTCAT+TGG | + | chr5.3:70317832-70317851 | MS.gene37848:intron | 35.0% | |
| ATTCCTTAACCATTTCCTTG+AGG | + | chr5.3:70317745-70317764 | MS.gene37848:intron | 35.0% | |
| ATTGTTTAACCATTGCCTTG+AGG | - | chr5.3:70317634-70317653 | None:intergenic | 35.0% | |
| CATGAATAGAGTTAAGCTGT+GGG | - | chr5.3:70318333-70318352 | None:intergenic | 35.0% | |
| CATGCTACCCTTATATTTCA+AGG | - | chr5.3:70316883-70316902 | None:intergenic | 35.0% | |
| CTAATCATGTGAAATGCTGT+TGG | + | chr5.3:70319835-70319854 | MS.gene37848:intron | 35.0% | |
| CTTGCCAATCTAACTAGTTA+CGG | + | chr5.3:70319359-70319378 | MS.gene37848:intron | 35.0% | |
| GAAAATAACAAGAGAAGGGA+AGG | - | chr5.3:70320299-70320318 | None:intergenic | 35.0% | |
| GCACTATTGGAGAATAATGA+AGG | + | chr5.3:70318385-70318404 | MS.gene37848:CDS | 35.0% | |
| GCTTGATAAGATGGTTCTTA+TGG | + | chr5.3:70320686-70320705 | MS.gene37848:intron | 35.0% | |
| GGATAATTCTGCGTATGTTT+CGG | + | chr5.3:70316725-70316744 | MS.gene37848:CDS | 35.0% | |
| TAGAACAGAGGATCAAAAGA+TGG | - | chr5.3:70320590-70320609 | None:intergenic | 35.0% | |
| TATCCACATGCTTGATAAGA+TGG | + | chr5.3:70320677-70320696 | MS.gene37848:intron | 35.0% | |
| TCTGTAGATAAAATGCAGCA+TGG | - | chr5.3:70318783-70318802 | None:intergenic | 35.0% | |
| TGAAATATAAGGGTAGCATG+TGG | + | chr5.3:70316883-70316902 | MS.gene37848:CDS | 35.0% | |
| TGAAGCCTTCATGTATCATA+TGG | - | chr5.3:70317831-70317850 | None:intergenic | 35.0% | |
| TTCCTTAACCATTTCCTTGA+GGG | + | chr5.3:70317746-70317765 | MS.gene37848:intron | 35.0% | |
| TTGTTTAACCATTGCCTTGA+GGG | - | chr5.3:70317633-70317652 | None:intergenic | 35.0% | |
| TTTCAAGAGAGCGATCAAAA+TGG | - | chr5.3:70316848-70316867 | None:intergenic | 35.0% | |
| TTTGCTTCTCAAAATCTAGC+CGG | + | chr5.3:70319037-70319056 | MS.gene37848:CDS | 35.0% | |
| ! | ATTTTACATCTGTCTCTGAG+GGG | + | chr5.3:70318052-70318071 | MS.gene37848:intron | 35.0% |
| ! | CAACTTTGTTTAACTAGCAG+AGG | - | chr5.3:70319210-70319229 | None:intergenic | 35.0% |
| ! | CTTTTCCGTTCTCGATAATT+TGG | + | chr5.3:70320347-70320366 | MS.gene37848:intron | 35.0% |
| ! | GTTTCTCTTACAGGTTTTCT+AGG | - | chr5.3:70317262-70317281 | None:intergenic | 35.0% |
| ! | TGTGACAGATTTAGAACCAA+AGG | + | chr5.3:70318534-70318553 | MS.gene37848:CDS | 35.0% |
| ! | TTTCATGGTAGTGTTAAGCA+CGG | + | chr5.3:70318615-70318634 | MS.gene37848:intron | 35.0% |
| !! | CGCTTAACTTATTTTCGTGT+TGG | - | chr5.3:70317034-70317053 | None:intergenic | 35.0% |
| !! | TGTTTTTGTCTGGTTTGCAT+GGG | + | chr5.3:70319081-70319100 | MS.gene37848:intron | 35.0% |
| !!! | AACTTCCTTTTTTGAACAGG+TGG | - | chr5.3:70319614-70319633 | None:intergenic | 35.0% |
| !!! | ATGTTACTTTTGATGTGGCT+GGG | + | chr5.3:70318413-70318432 | MS.gene37848:CDS | 35.0% |
| !!! | ATTTTTTGATGGCACGGATA+TGG | + | chr5.3:70318495-70318514 | MS.gene37848:CDS | 35.0% |
| !!! | GTTACAAGCGTTTTTTCAGA+CGG | + | chr5.3:70318221-70318240 | MS.gene37848:CDS | 35.0% |
| !!! | TTGTTTTTGTCTGGTTTGCA+TGG | + | chr5.3:70319080-70319099 | MS.gene37848:intron | 35.0% |
| AAAAACAGATAGAAACCCGC+AGG | - | chr5.3:70320530-70320549 | None:intergenic | 40.0% | |
| AAGTCAGCAATGCATCGTTA+TGG | - | chr5.3:70319685-70319704 | None:intergenic | 40.0% | |
| AATAACAAGAGAAGGGAAGG+AGG | - | chr5.3:70320296-70320315 | None:intergenic | 40.0% | |
| AATGCTAAACAATGCCCTCA+AGG | + | chr5.3:70317616-70317635 | MS.gene37848:intron | 40.0% | |
| ACATACGCAGAATTATCCTC+CGG | - | chr5.3:70316723-70316742 | None:intergenic | 40.0% | |
| ATATAAGGGTAGCATGTGGT+AGG | + | chr5.3:70316887-70316906 | MS.gene37848:intron | 40.0% | |
| ATATAGTCAACCCTGCTTAG+TGG | + | chr5.3:70320205-70320224 | MS.gene37848:intron | 40.0% | |
| CCATGAAAGAAAAATGCCCA+TGG | + | chr5.3:70320752-70320771 | MS.gene37848:CDS | 40.0% | |
| CGATCTACTTCTATCCTGAT+GGG | + | chr5.3:70316691-70316710 | MS.gene37848:CDS | 40.0% | |
| CGCACAAATTCTTGATCCAA+GGG | + | chr5.3:70316592-70316611 | MS.gene37848:CDS | 40.0% | |
| CGGTGAAAACTATGTTTAGG+CGG | + | chr5.3:70317152-70317171 | MS.gene37848:intron | 40.0% | |
| GAACCATCTTATCAAGCATG+TGG | - | chr5.3:70320683-70320702 | None:intergenic | 40.0% | |
| GAAGTTTCCTGGTCATAAGT+TGG | + | chr5.3:70318438-70318457 | MS.gene37848:CDS | 40.0% | |
| GACATGGCTAATTCTATGGA+GGG | + | chr5.3:70319389-70319408 | MS.gene37848:intron | 40.0% | |
| GAGGAAAGTCAAAACACTAG+AGG | + | chr5.3:70317232-70317251 | MS.gene37848:intron | 40.0% | |
| GCATGGCCTGTAAAAGTAAA+CGG | - | chr5.3:70318766-70318785 | None:intergenic | 40.0% | |
| GGAAAAATCTCAGAGTGTGT+GGG | + | chr5.3:70320834-70320853 | MS.gene37848:CDS | 40.0% | |
| GTGATCCAATGTCAGATTCT+GGG | - | chr5.3:70318357-70318376 | None:intergenic | 40.0% | |
| GTTGTTTGACATACACGAGT+AGG | + | chr5.3:70319226-70319245 | MS.gene37848:intron | 40.0% | |
| TAGTCTATGCAGTTGTGTGT+GGG | + | chr5.3:70317904-70317923 | MS.gene37848:intron | 40.0% | |
| TATAAGGGTAGCATGTGGTA+GGG | + | chr5.3:70316888-70316907 | MS.gene37848:intron | 40.0% | |
| TATAGTCAACCCTGCTTAGT+GGG | + | chr5.3:70320206-70320225 | MS.gene37848:intron | 40.0% | |
| TCGATAACGCAAACGGTTAA+CGG | + | chr5.3:70316567-70316586 | MS.gene37848:CDS | 40.0% | |
| TCGCACAAATTCTTGATCCA+AGG | + | chr5.3:70316591-70316610 | MS.gene37848:CDS | 40.0% | |
| TCTGACATTGGATCACACTT+TGG | + | chr5.3:70318361-70318380 | MS.gene37848:CDS | 40.0% | |
| TGACATGGCTAATTCTATGG+AGG | + | chr5.3:70319388-70319407 | MS.gene37848:intron | 40.0% | |
| TGTGATCCAATGTCAGATTC+TGG | - | chr5.3:70318358-70318377 | None:intergenic | 40.0% | |
| TTAGTCTATGCAGTTGTGTG+TGG | + | chr5.3:70317903-70317922 | MS.gene37848:intron | 40.0% | |
| TTTGATCGCTCTCTTGAAAG+TGG | + | chr5.3:70316849-70316868 | MS.gene37848:CDS | 40.0% | |
| ! | AAAACCTTTTCCCACTAAGC+AGG | - | chr5.3:70320219-70320238 | None:intergenic | 40.0% |
| ! | AAACCTTTTCCCACTAAGCA+GGG | - | chr5.3:70320218-70320237 | None:intergenic | 40.0% |
| ! | ATCACACTTTGGTGCACTAT+TGG | + | chr5.3:70318372-70318391 | MS.gene37848:CDS | 40.0% |
| ! | ATTTGGAACACATGAAGGCT+AGG | - | chr5.3:70320027-70320046 | None:intergenic | 40.0% |
| ! | CCATGGGCATTTTTCTTTCA+TGG | - | chr5.3:70320755-70320774 | None:intergenic | 40.0% |
| ! | GACACATTTGGAACACATGA+AGG | - | chr5.3:70320032-70320051 | None:intergenic | 40.0% |
| ! | TCGAAATTCTGGAGATCTAG+CGG | - | chr5.3:70318470-70318489 | None:intergenic | 40.0% |
| ! | TTCACCGTCTTTTCTACGAT+AGG | - | chr5.3:70317139-70317158 | None:intergenic | 40.0% |
| !! | GCAAACAGCTTTTAACTCTG+TGG | - | chr5.3:70319011-70319030 | None:intergenic | 40.0% |
| !! | TGTAGCCAACATTTTGACCT+TGG | + | chr5.3:70318970-70318989 | MS.gene37848:CDS | 40.0% |
| !!! | GATGTTACTTTTGATGTGGC+TGG | + | chr5.3:70318412-70318431 | MS.gene37848:CDS | 40.0% |
| !!! | TGTTACTTTTGATGTGGCTG+GGG | + | chr5.3:70318414-70318433 | MS.gene37848:CDS | 40.0% |
| AAACAATGCCCTCAAGGCAA+TGG | + | chr5.3:70317622-70317641 | MS.gene37848:intron | 45.0% | |
| AACTAGTGCCCTCAAGGAAA+TGG | - | chr5.3:70317757-70317776 | None:intergenic | 45.0% | |
| AAGATCTCTGACTGTAGCCA+TGG | - | chr5.3:70320772-70320791 | None:intergenic | 45.0% | |
| AAGCCTTACCCTACTAAGTG+GGG | - | chr5.3:70317359-70317378 | None:intergenic | 45.0% | |
| AAGGAGAGTAGATCAGATGG+AGG | + | chr5.3:70317213-70317232 | MS.gene37848:intron | 45.0% | |
| AGATCTCTGACTGTAGCCAT+GGG | - | chr5.3:70320771-70320790 | None:intergenic | 45.0% | |
| AGATTCCCTTACAGAAGAGG+TGG | + | chr5.3:70318802-70318821 | MS.gene37848:CDS | 45.0% | |
| AGGGTGATAGTTGCAGTACA+GGG | + | chr5.3:70320812-70320831 | MS.gene37848:CDS | 45.0% | |
| AGTCTATGCAGTTGTGTGTG+GGG | + | chr5.3:70317905-70317924 | MS.gene37848:intron | 45.0% | |
| AGTTGTGTGTGGGGATAACT+TGG | + | chr5.3:70317914-70317933 | MS.gene37848:intron | 45.0% | |
| ATGAGGTCAGACCATTGTAG+AGG | + | chr5.3:70320504-70320523 | MS.gene37848:intron | 45.0% | |
| ATGCATTGTCCTTGTCCACA+AGG | - | chr5.3:70318134-70318153 | None:intergenic | 45.0% | |
| CAACTGTACAGTTGGAGTTG+TGG | + | chr5.3:70318291-70318310 | MS.gene37848:CDS | 45.0% | |
| CAAGCCTTACCCTACTAAGT+GGG | - | chr5.3:70317360-70317379 | None:intergenic | 45.0% | |
| CAGAGATTCCCTTACAGAAG+AGG | + | chr5.3:70318799-70318818 | MS.gene37848:CDS | 45.0% | |
| CATAAACAGTAAACCCCTGG+TGG | - | chr5.3:70319427-70319446 | None:intergenic | 45.0% | |
| CATGTCCACCTCTTCTGTAA+GGG | - | chr5.3:70318810-70318829 | None:intergenic | 45.0% | |
| CATGTCCCAGAATCTGACAT+TGG | + | chr5.3:70318349-70318368 | MS.gene37848:CDS | 45.0% | |
| CCATCTGATCTACTCTCCTT+AGG | - | chr5.3:70317213-70317232 | None:intergenic | 45.0% | |
| CCTAAGGAGAGTAGATCAGA+TGG | + | chr5.3:70317210-70317229 | MS.gene37848:intron | 45.0% | |
| CTATCCTGATGGGAAGAATC+CGG | + | chr5.3:70316701-70316720 | MS.gene37848:CDS | 45.0% | |
| CTTGTTGATCAGAGTGGTCA+GGG | + | chr5.3:70316804-70316823 | MS.gene37848:CDS | 45.0% | |
| GACATGTGGATTCTGACCTA+AGG | + | chr5.3:70317194-70317213 | MS.gene37848:intron | 45.0% | |
| GAGATCTTGAAGACAGTTGC+TGG | + | chr5.3:70320784-70320803 | MS.gene37848:CDS | 45.0% | |
| GAGTTGTAACCTTGTGGACA+AGG | + | chr5.3:70318122-70318141 | MS.gene37848:intron | 45.0% | |
| GCGATCTACTTCTATCCTGA+TGG | + | chr5.3:70316690-70316709 | MS.gene37848:CDS | 45.0% | |
| GGGAAAAATCTCAGAGTGTG+TGG | + | chr5.3:70320833-70320852 | MS.gene37848:CDS | 45.0% | |
| GTCACCACCATCTGAAAGTT+GGG | - | chr5.3:70320860-70320879 | None:intergenic | 45.0% | |
| GTCAGCCAAGGTCAAAATGT+TGG | - | chr5.3:70318978-70318997 | None:intergenic | 45.0% | |
| GTTTAGGCGGTTTAGTCATG+TGG | + | chr5.3:70317165-70317184 | MS.gene37848:intron | 45.0% | |
| TCATGTGGAGAGAAGACATG+TGG | + | chr5.3:70317180-70317199 | MS.gene37848:intron | 45.0% | |
| TCCACAAGGTTACAACTCAG+AGG | - | chr5.3:70318120-70318139 | None:intergenic | 45.0% | |
| TCCTCTGAGTTGTAACCTTG+TGG | + | chr5.3:70318116-70318135 | MS.gene37848:intron | 45.0% | |
| TCGGTCAAACGCAAACTAGT+AGG | + | chr5.3:70319458-70319477 | MS.gene37848:intron | 45.0% | |
| TCTATGGAGGGTTTGACCAT+AGG | + | chr5.3:70319401-70319420 | MS.gene37848:intron | 45.0% | |
| TCTCGTCTTTGCAAGGACAT+TGG | + | chr5.3:70318938-70318957 | MS.gene37848:CDS | 45.0% | |
| TGCCCTCAAGGAAATGGTTA+AGG | - | chr5.3:70317751-70317770 | None:intergenic | 45.0% | |
| TGCTGCCACCTGTTCAAAAA+AGG | + | chr5.3:70319606-70319625 | MS.gene37848:intron | 45.0% | |
| TGTCACCACCATCTGAAAGT+TGG | - | chr5.3:70320861-70320880 | None:intergenic | 45.0% | |
| TTAACTCTGTGGCATGGCAA+TGG | - | chr5.3:70319000-70319019 | None:intergenic | 45.0% | |
| TTAGCTGCAGCAGACAAGTA+TGG | + | chr5.3:70318887-70318906 | MS.gene37848:CDS | 45.0% | |
| TTGTTGATCAGAGTGGTCAG+GGG | + | chr5.3:70316805-70316824 | MS.gene37848:CDS | 45.0% | |
| ! | TCAGATGGTGGTGACACAAT+TGG | + | chr5.3:70320865-70320884 | MS.gene37848:CDS | 45.0% |
| ! | TGTTTCGGTTTTCATCGCGT+TGG | + | chr5.3:70316740-70316759 | MS.gene37848:CDS | 45.0% |
| !! | CAGCTTTTAACTCTGTGGCA+TGG | - | chr5.3:70319006-70319025 | None:intergenic | 45.0% |
| !! | TATTTGGGGGAAGTACTGCT+CGG | + | chr5.3:70318719-70318738 | MS.gene37848:intron | 45.0% |
| !! | TCCTGGTCATAAGTTGGTGT+TGG | + | chr5.3:70318444-70318463 | MS.gene37848:CDS | 45.0% |
| AAGGGAAGGAGGAGCTTACA+TGG | - | chr5.3:70320285-70320304 | None:intergenic | 50.0% | |
| AGCCTTACCCTACTAAGTGG+GGG | - | chr5.3:70317358-70317377 | None:intergenic | 50.0% | |
| CAACCCTGCTTAGTGGGAAA+AGG | + | chr5.3:70320212-70320231 | MS.gene37848:intron | 50.0% | |
| CCAAGCCTTACCCTACTAAG+TGG | - | chr5.3:70317361-70317380 | None:intergenic | 50.0% | |
| CCACTTAGTAGGGTAAGGCT+TGG | + | chr5.3:70317358-70317377 | MS.gene37848:intron | 50.0% | |
| CCATGTCCACCTCTTCTGTA+AGG | - | chr5.3:70318811-70318830 | None:intergenic | 50.0% | |
| CCTTACAGAAGAGGTGGACA+TGG | + | chr5.3:70318808-70318827 | MS.gene37848:CDS | 50.0% | |
| CTTGCTAACTAGTGCCCTCA+AGG | - | chr5.3:70317763-70317782 | None:intergenic | 50.0% | |
| GAGATCGTTGGGGAGGATAA+CGG | - | chr5.3:70316543-70316562 | None:intergenic | 50.0% | |
| GAGGGTGATAGTTGCAGTAC+AGG | + | chr5.3:70320811-70320830 | MS.gene37848:CDS | 50.0% | |
| GCCAACACCAACTTATGACC+AGG | - | chr5.3:70318448-70318467 | None:intergenic | 50.0% | |
| GCTATCAACGTCTCCGAAAC+TGG | - | chr5.3:70318860-70318879 | None:intergenic | 50.0% | |
| GGGTGATAGTTGCAGTACAG+GGG | + | chr5.3:70320813-70320832 | MS.gene37848:CDS | 50.0% | |
| TAGAGAGAGAGGGAGAGAGT+TGG | + | chr5.3:70317107-70317126 | MS.gene37848:intron | 50.0% | |
| TGCAGCAGACAAGTATGGCT+TGG | + | chr5.3:70318892-70318911 | MS.gene37848:CDS | 50.0% | |
| TGTCGGAGATGATGCGTTTC+CGG | - | chr5.3:70316502-70316521 | None:intergenic | 50.0% | |
| TGTTGCAGCTGTCATGAGGT+CGG | + | chr5.3:70320717-70320736 | MS.gene37848:intron | 50.0% | |
| TTACCCTACTAAGTGGGGGT+CGG | - | chr5.3:70317354-70317373 | None:intergenic | 50.0% | |
| TTATCGAGCGCGAGATCGTT+GGG | - | chr5.3:70316554-70316573 | None:intergenic | 50.0% | |
| ! | AAGACAGTTGCTGGCTGTGA+GGG | + | chr5.3:70320793-70320812 | MS.gene37848:CDS | 50.0% |
| ! | AGCGATATTTTCACCGTCGG+AGG | + | chr5.3:70316657-70316676 | MS.gene37848:CDS | 50.0% |
| ! | ATGGTGGTGACACAATTGGC+AGG | + | chr5.3:70320869-70320888 | MS.gene37848:CDS | 50.0% |
| ! | CAGACAAGTATGGCTTGGAG+AGG | + | chr5.3:70318897-70318916 | MS.gene37848:CDS | 50.0% |
| ! | CTCACGCTTGTTGATCAGAG+TGG | + | chr5.3:70316798-70316817 | MS.gene37848:CDS | 50.0% |
| ! | GCGAGCGATATTTTCACCGT+CGG | + | chr5.3:70316654-70316673 | MS.gene37848:CDS | 50.0% |
| ! | GCGATATTTTCACCGTCGGA+GGG | + | chr5.3:70316658-70316677 | MS.gene37848:CDS | 50.0% |
| ! | GCTTGTTGATCAGAGTGGTC+AGG | + | chr5.3:70316803-70316822 | MS.gene37848:CDS | 50.0% |
| ! | TGGTAGTGTTAAGCACGGCT+AGG | + | chr5.3:70318620-70318639 | MS.gene37848:intron | 50.0% |
| !! | ATTTGGGGGAAGTACTGCTC+GGG | + | chr5.3:70318720-70318739 | MS.gene37848:intron | 50.0% |
| !! | GACTTGTTGCAGCTGTCATG+AGG | + | chr5.3:70320713-70320732 | MS.gene37848:intron | 50.0% |
| AAACCCGCAGGCCTCTACAA+TGG | - | chr5.3:70320518-70320537 | None:intergenic | 55.0% | |
| AGACCATTGTAGAGGCCTGC+GGG | + | chr5.3:70320512-70320531 | MS.gene37848:intron | 55.0% | |
| AGTAAACCCCTGGTGGCCTA+TGG | - | chr5.3:70319420-70319439 | None:intergenic | 55.0% | |
| CAGACCATTGTAGAGGCCTG+CGG | + | chr5.3:70320511-70320530 | MS.gene37848:intron | 55.0% | |
| CTCGCGCTCGATAACGCAAA+CGG | + | chr5.3:70316560-70316579 | MS.gene37848:CDS | 55.0% | |
| GACCCCCACTTAGTAGGGTA+AGG | + | chr5.3:70317353-70317372 | MS.gene37848:intron | 55.0% | |
| GGTTTGACCATAGGCCACCA+GGG | + | chr5.3:70319410-70319429 | MS.gene37848:intron | 55.0% | |
| GTGCGAGTCTCGTCTTTGCA+AGG | + | chr5.3:70318931-70318950 | MS.gene37848:CDS | 55.0% | |
| GTGTGGGCCCAACTTTCAGA+TGG | + | chr5.3:70320850-70320869 | MS.gene37848:CDS | 55.0% | |
| GTTATCGAGCGCGAGATCGT+TGG | - | chr5.3:70316555-70316574 | None:intergenic | 55.0% | |
| GTTTGACCATAGGCCACCAG+GGG | + | chr5.3:70319411-70319430 | MS.gene37848:intron | 55.0% | |
| TACTCGCTCGCGAAGGGAAT+GGG | + | chr5.3:70316615-70316634 | MS.gene37848:CDS | 55.0% | |
| TAGCCGACCCCCACTTAGTA+GGG | + | chr5.3:70317348-70317367 | MS.gene37848:intron | 55.0% | |
| TATCGAGCGCGAGATCGTTG+GGG | - | chr5.3:70316553-70316572 | None:intergenic | 55.0% | |
| TCCTCCGGATTCTTCCCATC+AGG | - | chr5.3:70316708-70316727 | None:intergenic | 55.0% | |
| TCCTGATGGGAAGAATCCGG+AGG | + | chr5.3:70316704-70316723 | MS.gene37848:CDS | 55.0% | |
| TGGCACGGATATGGACACAC+AGG | + | chr5.3:70318504-70318523 | MS.gene37848:CDS | 55.0% | |
| TGGGCCCAACTTTCAGATGG+TGG | + | chr5.3:70320853-70320872 | MS.gene37848:CDS | 55.0% | |
| ! | GAAGACAGTTGCTGGCTGTG+AGG | + | chr5.3:70320792-70320811 | MS.gene37848:CDS | 55.0% |
| ! | GAGTGGTCAGGGGAAGCATA+AGG | + | chr5.3:70316815-70316834 | MS.gene37848:CDS | 55.0% |
| ! | TTCATCGCGTTGGCGAGTGA+AGG | + | chr5.3:70316750-70316769 | MS.gene37848:CDS | 55.0% |
| CTAAGTGGGGGTCGGCTACA+TGG | - | chr5.3:70317346-70317365 | None:intergenic | 60.0% | |
| CTCGCGAAGGGAATGGGAGT+TGG | + | chr5.3:70316621-70316640 | MS.gene37848:CDS | 60.0% | |
| GCAGCTGTCATGAGGTCGGA+TGG | + | chr5.3:70320721-70320740 | MS.gene37848:intron | 60.0% | |
| GGCATGGCAATGGTCAGCCA+AGG | - | chr5.3:70318990-70319009 | None:intergenic | 60.0% | |
| GGGTTTGACCATAGGCCACC+AGG | + | chr5.3:70319409-70319428 | MS.gene37848:intron | 60.0% | |
| GTACTCGCTCGCGAAGGGAA+TGG | + | chr5.3:70316614-70316633 | MS.gene37848:CDS | 60.0% | |
| GTAGCCGACCCCCACTTAGT+AGG | + | chr5.3:70317347-70317366 | MS.gene37848:intron | 60.0% | |
| GTGGCTGGGGAGAAGTTTCC+TGG | + | chr5.3:70318427-70318446 | MS.gene37848:CDS | 60.0% | |
| TCCGACACCATCACCGTCAC+CGG | + | chr5.3:70316515-70316534 | MS.gene37848:CDS | 60.0% | |
| ! | CGCGTTGGCGAGTGAAGGAA+CGG | + | chr5.3:70316755-70316774 | MS.gene37848:CDS | 60.0% |
| !! | CAAGGGTACTCGCTCGCGAA+GGG | + | chr5.3:70316609-70316628 | MS.gene37848:CDS | 60.0% |
| !! | CACCGTCGGAGGGTATCAGT+GGG | + | chr5.3:70316668-70316687 | MS.gene37848:CDS | 60.0% |
| !! | TCACCGTCGGAGGGTATCAG+TGG | + | chr5.3:70316667-70316686 | MS.gene37848:CDS | 60.0% |
| CCTTCGCGAGCGAGTACCCT+TGG | - | chr5.3:70316611-70316630 | None:intergenic | 65.0% | |
| CGCCCACTGATACCCTCCGA+CGG | - | chr5.3:70316673-70316692 | None:intergenic | 65.0% | |
| ! | GCCGGTGACGGTGATGGTGT+CGG | - | chr5.3:70316519-70316538 | None:intergenic | 65.0% |
| ! | GTTGGGGAGGATAACGGCGC+CGG | - | chr5.3:70316537-70316556 | None:intergenic | 65.0% |
| !! | CCAAGGGTACTCGCTCGCGA+AGG | + | chr5.3:70316608-70316627 | MS.gene37848:CDS | 65.0% |
| !! | GAGGATAACGGCGCCGGTGA+CGG | - | chr5.3:70316531-70316550 | None:intergenic | 65.0% |
| !! | TGGGGGAAGTACTGCTCGGG+AGG | + | chr5.3:70318723-70318742 | MS.gene37848:intron | 65.0% |
| CGAGCGCGAGATCGTTGGGG+AGG | - | chr5.3:70316550-70316569 | None:intergenic | 70.0% | |
| !! | AACGGCGCCGGTGACGGTGA+TGG | - | chr5.3:70316525-70316544 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 70316495 | 70320912 | 70316495 | ID=MS.gene37848 |
| chr5.3 | mRNA | 70316495 | 70320912 | 70316495 | ID=MS.gene37848.t1;Parent=MS.gene37848 |
| chr5.3 | exon | 70316495 | 70316904 | 70316495 | ID=MS.gene37848.t1.exon1;Parent=MS.gene37848.t1 |
| chr5.3 | CDS | 70316495 | 70316904 | 70316495 | ID=cds.MS.gene37848.t1;Parent=MS.gene37848.t1 |
| chr5.3 | exon | 70318219 | 70318564 | 70318219 | ID=MS.gene37848.t1.exon2;Parent=MS.gene37848.t1 |
| chr5.3 | CDS | 70318219 | 70318564 | 70318219 | ID=cds.MS.gene37848.t1;Parent=MS.gene37848.t1 |
| chr5.3 | exon | 70318779 | 70319058 | 70318779 | ID=MS.gene37848.t1.exon3;Parent=MS.gene37848.t1 |
| chr5.3 | CDS | 70318779 | 70319058 | 70318779 | ID=cds.MS.gene37848.t1;Parent=MS.gene37848.t1 |
| chr5.3 | exon | 70320725 | 70320912 | 70320725 | ID=MS.gene37848.t1.exon4;Parent=MS.gene37848.t1 |
| chr5.3 | CDS | 70320725 | 70320912 | 70320725 | ID=cds.MS.gene37848.t1;Parent=MS.gene37848.t1 |
| Gene Sequence |
| Protein sequence |
