Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051019.t1 | XP_003627464.1 | 96.7 | 241 | 7 | 1 | 1 | 240 | 1 | 241 | 6.50E-127 | 463.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051019.t1 | Q9SHI7 | 73.8 | 240 | 60 | 1 | 1 | 240 | 1 | 237 | 9.5e-95 | 347.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051019.t1 | B7FML7 | 96.7 | 241 | 7 | 1 | 1 | 240 | 1 | 241 | 4.7e-127 | 463.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049499 | MS.gene051019 | 0.80708 | 6.02E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene051699 | 0.811859 | 5.67E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene052793 | 0.802841 | 4.63E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene053272 | -0.824637 | 7.25E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene054142 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene057102 | 0.826419 | 2.74E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene05985 | -0.825655 | 4.16E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene060338 | 0.819068 | 1.41E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene060937 | 0.81133 | 7.39E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene061188 | 0.81624 | 6.13E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene061782 | 0.807318 | 5.36E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene064638 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene065510 | 0.801757 | 7.74E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene069289 | 0.828973 | 6.67E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene070025 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene070029 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene08461 | 0.867923 | 9.56E-66 | -1.69E-46 |
| MS.gene051019 | MS.gene21536 | 0.808335 | 3.26E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene23695 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene25991 | 0.8322 | 1.08E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene28918 | 0.813778 | 2.15E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene31111 | 0.823674 | 1.22E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene32182 | 0.832715 | 8.07E-56 | -1.69E-46 |
| MS.gene051019 | MS.gene32688 | 0.816078 | 6.66E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene34508 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene35858 | 0.825698 | 4.07E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene37848 | 0.806852 | 6.73E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene38207 | 0.815587 | 8.57E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene38759 | 0.835687 | 1.45E-56 | -1.69E-46 |
| MS.gene051019 | MS.gene39037 | 0.809807 | 1.58E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene39406 | 0.83231 | 1.02E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene39835 | -0.824851 | 6.45E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene42653 | 0.822782 | 1.97E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene44179 | 0.819769 | 9.76E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene47276 | 0.846202 | 2.52E-59 | -1.69E-46 |
| MS.gene051019 | MS.gene51454 | 0.802987 | 4.32E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene52122 | 0.819399 | 1.19E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene52849 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene52994 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene55005 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene58248 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene61516 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene61588 | 0.800396 | 1.47E-48 | -1.69E-46 |
| MS.gene051019 | MS.gene62387 | 0.803733 | 3.03E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene62677 | 0.83059 | 2.70E-55 | -1.69E-46 |
| MS.gene051019 | MS.gene63430 | 0.804074 | 2.57E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene67631 | 0.802032 | 6.80E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene68198 | 0.813321 | 2.72E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene69820 | 0.805808 | 1.12E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene70656 | 0.824811 | 6.59E-54 | -1.69E-46 |
| MS.gene051019 | MS.gene71891 | -0.819168 | 1.34E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene73513 | 0.805132 | 1.55E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene73885 | 0.80245 | 5.58E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene74537 | 0.840189 | 1.01E-57 | -1.69E-46 |
| MS.gene051019 | MS.gene74604 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene74761 | -0.809613 | 1.74E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene75344 | 0.839035 | 2.02E-57 | -1.69E-46 |
| MS.gene051019 | MS.gene76314 | 0.807463 | 4.99E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene79650 | -0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene80201 | 0.818981 | 1.48E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene80631 | 0.817624 | 2.99E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene80729 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene80846 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene83864 | 0.875909 | 2.13E-68 | -1.69E-46 |
| MS.gene051019 | MS.gene84179 | 0.820518 | 6.57E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene84703 | 0.81123 | 7.77E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene84734 | 0.801407 | 9.14E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene84834 | 0.805629 | 1.22E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene85954 | 0.804415 | 2.18E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene88062 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene92348 | 0.806847 | 6.74E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene92981 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene051019 | MS.gene93025 | 0.807508 | 4.88E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene93123 | 0.809581 | 1.76E-50 | -1.69E-46 |
| MS.gene051019 | MS.gene94056 | 0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene051019 | MS.gene94674 | 0.819233 | 1.29E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene95614 | 0.821901 | 3.16E-53 | -1.69E-46 |
| MS.gene051019 | MS.gene98636 | 0.821524 | 3.86E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene051019 | MS.gene30950 | PPI |
| MS.gene051019 | MS.gene72831 | PPI |
| MS.gene051019 | MS.gene070084 | PPI |
| MS.gene051019 | MS.gene31164 | PPI |
| MS.gene051019 | MS.gene028080 | PPI |
| MS.gene84986 | MS.gene051019 | PPI |
| MS.gene051019 | MS.gene028078 | PPI |
| MS.gene051019 | MS.gene052128 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051019.t1 | MTR_8g023380 | 97.510 | 241 | 5 | 1 | 1 | 240 | 1 | 241 | 2.57e-178 | 489 |
| MS.gene051019.t1 | MTR_4g121960 | 34.637 | 179 | 112 | 3 | 6 | 182 | 11 | 186 | 1.40e-33 | 123 |
| MS.gene051019.t1 | MTR_8g071040 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 5.42e-17 | 75.5 |
| MS.gene051019.t1 | MTR_1g021150 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 6.84e-16 | 72.8 |
| MS.gene051019.t1 | MTR_8g468530 | 31.092 | 119 | 73 | 3 | 8 | 122 | 23 | 136 | 1.04e-15 | 72.8 |
| MS.gene051019.t1 | MTR_3g062450 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 1.05e-15 | 72.0 |
| MS.gene051019.t1 | MTR_5g075580 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 1.12e-15 | 72.0 |
| MS.gene051019.t1 | MTR_4g108080 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.86e-15 | 71.6 |
| MS.gene051019.t1 | MTR_7g116940 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 1.99e-15 | 71.6 |
| MS.gene051019.t1 | MTR_4g073240 | 31.624 | 117 | 71 | 3 | 8 | 120 | 4 | 115 | 2.49e-15 | 71.2 |
| MS.gene051019.t1 | MTR_7g116940 | 33.333 | 111 | 65 | 3 | 8 | 114 | 4 | 109 | 1.53e-13 | 65.9 |
| MS.gene051019.t1 | MTR_4g108080 | 31.481 | 108 | 65 | 3 | 8 | 111 | 7 | 109 | 4.35e-13 | 64.3 |
| MS.gene051019.t1 | MTR_7g116940 | 30.973 | 113 | 69 | 3 | 8 | 116 | 4 | 111 | 4.85e-13 | 65.1 |
| MS.gene051019.t1 | MTR_8g085690 | 28.571 | 126 | 73 | 3 | 8 | 125 | 25 | 141 | 9.22e-13 | 64.7 |
| MS.gene051019.t1 | MTR_3g110110 | 29.600 | 125 | 78 | 4 | 4 | 122 | 2 | 122 | 8.87e-12 | 61.6 |
| MS.gene051019.t1 | MTR_1g021150 | 33.673 | 98 | 56 | 3 | 27 | 120 | 31 | 123 | 1.65e-11 | 60.8 |
| MS.gene051019.t1 | MTR_5g009020 | 33.621 | 116 | 68 | 3 | 4 | 115 | 31 | 141 | 3.35e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT1G17280 | 77.083 | 240 | 52 | 2 | 1 | 240 | 1 | 237 | 1.34e-138 | 389 |
| MS.gene051019.t1 | AT5G50430 | 74.590 | 244 | 57 | 2 | 1 | 240 | 1 | 243 | 9.70e-137 | 384 |
| MS.gene051019.t1 | AT5G50430 | 74.590 | 244 | 57 | 2 | 1 | 240 | 1 | 243 | 9.70e-137 | 384 |
| MS.gene051019.t1 | AT1G17280 | 75.203 | 246 | 52 | 3 | 1 | 240 | 1 | 243 | 3.42e-136 | 383 |
| MS.gene051019.t1 | AT5G50430 | 69.262 | 244 | 57 | 3 | 1 | 240 | 1 | 230 | 6.46e-122 | 346 |
| MS.gene051019.t1 | AT3G17000 | 41.912 | 136 | 76 | 2 | 6 | 139 | 12 | 146 | 1.23e-33 | 123 |
| MS.gene051019.t1 | AT5G56150 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 5.56e-17 | 75.5 |
| MS.gene051019.t1 | AT3G08690 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 3.80e-16 | 73.6 |
| MS.gene051019.t1 | AT3G08690 | 34.188 | 117 | 68 | 3 | 8 | 120 | 4 | 115 | 3.80e-16 | 73.6 |
| MS.gene051019.t1 | AT4G27960 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 5.94e-16 | 72.8 |
| MS.gene051019.t1 | AT1G64230 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 6.87e-16 | 72.8 |
| MS.gene051019.t1 | AT1G64230 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 6.87e-16 | 72.8 |
| MS.gene051019.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.04e-15 | 72.4 |
| MS.gene051019.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.04e-15 | 72.4 |
| MS.gene051019.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.04e-15 | 72.4 |
| MS.gene051019.t1 | AT2G02760 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.04e-15 | 72.4 |
| MS.gene051019.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 1.10e-15 | 72.0 |
| MS.gene051019.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 1.10e-15 | 72.0 |
| MS.gene051019.t1 | AT5G41700 | 33.333 | 117 | 69 | 3 | 8 | 120 | 4 | 115 | 1.10e-15 | 72.0 |
| MS.gene051019.t1 | AT1G14400 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.19e-15 | 72.0 |
| MS.gene051019.t1 | AT1G14400 | 31.092 | 119 | 73 | 3 | 8 | 122 | 7 | 120 | 1.19e-15 | 72.0 |
| MS.gene051019.t1 | AT4G27960 | 33.333 | 117 | 69 | 3 | 8 | 120 | 34 | 145 | 1.61e-15 | 72.4 |
| MS.gene051019.t1 | AT5G41700 | 34.746 | 118 | 67 | 4 | 8 | 120 | 4 | 116 | 2.04e-15 | 71.6 |
| MS.gene051019.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.36e-15 | 71.2 |
| MS.gene051019.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.36e-15 | 71.2 |
| MS.gene051019.t1 | AT5G53300 | 32.479 | 117 | 70 | 3 | 8 | 120 | 4 | 115 | 2.36e-15 | 71.2 |
| MS.gene051019.t1 | AT5G62540 | 31.061 | 132 | 78 | 4 | 8 | 135 | 7 | 129 | 1.22e-14 | 69.3 |
| MS.gene051019.t1 | AT5G56150 | 33.929 | 112 | 64 | 4 | 8 | 115 | 4 | 109 | 1.86e-14 | 67.8 |
| MS.gene051019.t1 | AT2G16740 | 30.769 | 117 | 72 | 3 | 8 | 120 | 4 | 115 | 3.05e-14 | 68.2 |
| MS.gene051019.t1 | AT1G64230 | 30.000 | 120 | 71 | 4 | 5 | 120 | 47 | 157 | 1.58e-13 | 67.4 |
| MS.gene051019.t1 | AT1G64230 | 30.000 | 120 | 71 | 4 | 5 | 120 | 47 | 157 | 1.58e-13 | 67.4 |
| MS.gene051019.t1 | AT5G41700 | 33.654 | 104 | 60 | 3 | 8 | 107 | 4 | 102 | 3.53e-13 | 65.5 |
| MS.gene051019.t1 | AT1G64230 | 30.952 | 126 | 69 | 4 | 8 | 120 | 4 | 124 | 4.36e-13 | 65.5 |
| MS.gene051019.t1 | AT3G08700 | 31.356 | 118 | 71 | 4 | 8 | 120 | 4 | 116 | 5.85e-13 | 64.7 |
| MS.gene051019.t1 | AT3G08700 | 31.356 | 118 | 71 | 4 | 8 | 120 | 4 | 116 | 5.85e-13 | 64.7 |
| MS.gene051019.t1 | AT5G53300 | 32.692 | 104 | 61 | 3 | 8 | 107 | 4 | 102 | 1.91e-12 | 62.4 |
| MS.gene051019.t1 | AT1G36340 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.70e-12 | 63.2 |
| MS.gene051019.t1 | AT1G36340 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.70e-12 | 63.2 |
| MS.gene051019.t1 | AT5G25760 | 28.800 | 125 | 79 | 4 | 4 | 122 | 2 | 122 | 2.97e-11 | 60.5 |
| MS.gene051019.t1 | AT5G25760 | 28.800 | 125 | 79 | 4 | 4 | 122 | 2 | 122 | 2.97e-11 | 60.5 |
| MS.gene051019.t1 | AT3G13550 | 28.319 | 113 | 80 | 1 | 8 | 120 | 39 | 150 | 8.49e-11 | 59.3 |
Find 63 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGGATTCCAACTTTC+AGG | 0.160053 | 8.3:+68793685 | None:intergenic |
| TTATTACTCTTCTCCATCTT+TGG | 0.164344 | 8.3:-68792404 | MS.gene051019:CDS |
| CTCCATCTTTGGGGTTGTTA+TGG | 0.233457 | 8.3:-68792393 | MS.gene051019:CDS |
| GTGAAGGACGGGCCACAATA+TGG | 0.237187 | 8.3:+68794517 | None:intergenic |
| TATTACTCTTCTCCATCTTT+GGG | 0.241159 | 8.3:-68792403 | MS.gene051019:CDS |
| CTGATTCCAGGAGGTTTATA+AGG | 0.284681 | 8.3:+68793958 | None:intergenic |
| TAAAAGTCCGAGGTCTGTTT+TGG | 0.291867 | 8.3:-68792525 | MS.gene051019:CDS |
| TTCCTTGCAGTGCAACATTC+AGG | 0.294415 | 8.3:-68792643 | MS.gene051019:intron |
| TATGAATGCAGCATACTTAC+CGG | 0.344644 | 8.3:-68793483 | MS.gene051019:intron |
| TACCGGGCTTCTTTCATTCA+TGG | 0.353871 | 8.3:-68793466 | MS.gene051019:intron |
| TGTAGCATGACAACACCTAA+TGG | 0.360595 | 8.3:-68793854 | MS.gene051019:intron |
| CTTATAAACCTCCTGGAATC+AGG | 0.389083 | 8.3:-68793957 | MS.gene051019:intron |
| CCACAGGAGAAGACTTGAAA+AGG | 0.427561 | 8.3:-68792487 | MS.gene051019:CDS |
| ACAAGAAGGCACCTGATTCC+AGG | 0.429061 | 8.3:+68793946 | None:intergenic |
| CGGGCCACAATATGGGAAAC+TGG | 0.431636 | 8.3:+68794525 | None:intergenic |
| GTTGTACTTCTCCACGTACT+CGG | 0.441817 | 8.3:+68792610 | None:intergenic |
| TGTGTCATGAACCGCCCATT+AGG | 0.446261 | 8.3:+68793839 | None:intergenic |
| GAAGACTTGAAAAGGGTTGA+GGG | 0.448975 | 8.3:-68792479 | MS.gene051019:CDS |
| AGCGAGGGAACACCTTTCTC+AGG | 0.450214 | 8.3:-68794153 | MS.gene051019:intron |
| TTGTACTTCTCCACGTACTC+GGG | 0.458106 | 8.3:+68792611 | None:intergenic |
| TTGCAGTTCATCCTGAAAGT+TGG | 0.464526 | 8.3:-68793696 | MS.gene051019:intron |
| GAAAAGGGTTGAGGGATTGA+AGG | 0.471212 | 8.3:-68792471 | MS.gene051019:CDS |
| GAATATCCTTATAAACCTCC+TGG | 0.476050 | 8.3:-68793964 | MS.gene051019:CDS |
| AGTAATAACATCATCCAAGT+TGG | 0.481105 | 8.3:+68792419 | None:intergenic |
| GTAGCATGACAACACCTAAT+GGG | 0.487721 | 8.3:-68793853 | MS.gene051019:intron |
| TGCCATAACAACCCCAAAGA+TGG | 0.488741 | 8.3:+68792391 | None:intergenic |
| TGAAGGACGGGCCACAATAT+GGG | 0.495022 | 8.3:+68794518 | None:intergenic |
| AGAAGACTTGAAAAGGGTTG+AGG | 0.497193 | 8.3:-68792480 | MS.gene051019:CDS |
| TCATATCTCAGATTACGTAT+TGG | 0.507101 | 8.3:-68794181 | MS.gene051019:intron |
| GGAGCCAGTTTCCCATATTG+TGG | 0.524830 | 8.3:-68794529 | MS.gene051019:CDS |
| TACACTGCCAGTGGTTGGAC+TGG | 0.524839 | 8.3:+68792793 | None:intergenic |
| CGCCACTCAAGAATATCACT+TGG | 0.539408 | 8.3:+68794495 | None:intergenic |
| ATGCATCAAGCGCCTTCAGA+AGG | 0.549944 | 8.3:-68794989 | MS.gene051019:CDS |
| AATATCACTTGGTGAAGGAC+GGG | 0.551464 | 8.3:+68794506 | None:intergenic |
| ATCCAATGTGGTCTGTATCA+AGG | 0.552283 | 8.3:-68793672 | MS.gene051019:intron |
| ATTACTCTTCTCCATCTTTG+GGG | 0.552481 | 8.3:-68792402 | MS.gene051019:CDS |
| GAATATCACTTGGTGAAGGA+CGG | 0.560660 | 8.3:+68794505 | None:intergenic |
| TAATTTGCTAAACCTGAGAA+AGG | 0.560758 | 8.3:+68794141 | None:intergenic |
| TACCATGAATGAAAGAAGCC+CGG | 0.570761 | 8.3:+68793464 | None:intergenic |
| CACAGGAGAAGACTTGAAAA+GGG | 0.572298 | 8.3:-68792486 | MS.gene051019:CDS |
| GAAAACAATGTAGAGTCCAC+AGG | 0.573857 | 8.3:-68792503 | MS.gene051019:CDS |
| CAGCCAACGTCATCAGAGAC+TGG | 0.574761 | 8.3:-68792554 | MS.gene051019:CDS |
| TTGAGGGATTGAAGGATGCG+AGG | 0.577968 | 8.3:-68792463 | MS.gene051019:CDS |
| GTGCTCTATACTCCTTCTGA+AGG | 0.582054 | 8.3:+68794977 | None:intergenic |
| ATGAATGCAGCATACTTACC+GGG | 0.582437 | 8.3:-68793482 | MS.gene051019:intron |
| ATCTCAGATTACGTATTGGA+AGG | 0.583968 | 8.3:-68794177 | MS.gene051019:intron |
| AAAATTCACAGCTGGAGTAG+AGG | 0.587096 | 8.3:+68792365 | None:intergenic |
| GTGTTTACACTGCCAGTGGT+TGG | 0.587196 | 8.3:+68792788 | None:intergenic |
| GAAGATGTTCCCCGAGTACG+TGG | 0.599484 | 8.3:-68792621 | MS.gene051019:CDS |
| TGTACTTCTCCACGTACTCG+GGG | 0.603988 | 8.3:+68792612 | None:intergenic |
| ATGGATACCAGTCCAACCAC+TGG | 0.607472 | 8.3:-68792800 | MS.gene051019:CDS |
| GACCTTGATACAGACCACAT+TGG | 0.612471 | 8.3:+68793670 | None:intergenic |
| TACGTATTGGAAGGAAGCGA+GGG | 0.615267 | 8.3:-68794168 | MS.gene051019:CDS |
| TTACGTATTGGAAGGAAGCG+AGG | 0.625291 | 8.3:-68794169 | MS.gene051019:CDS |
| AGTAGTGTTTACACTGCCAG+TGG | 0.639725 | 8.3:+68792784 | None:intergenic |
| CACCAAGTGATATTCTTGAG+TGG | 0.643937 | 8.3:-68794497 | MS.gene051019:CDS |
| TCAAGAATATCACTTGGTGA+AGG | 0.663216 | 8.3:+68794501 | None:intergenic |
| GGTTTATAAGGATATTCCTG+AGG | 0.670816 | 8.3:+68793970 | None:intergenic |
| CTGAAAGTTGGAATCCAATG+TGG | 0.673790 | 8.3:-68793684 | MS.gene051019:CDS |
| TGACCAGTCTCTGATGACGT+TGG | 0.673844 | 8.3:+68792551 | None:intergenic |
| GCATGACAACACCTAATGGG+CGG | 0.704176 | 8.3:-68793850 | MS.gene051019:CDS |
| CTGGTCAAGATAAAAGTCCG+AGG | 0.710589 | 8.3:-68792535 | MS.gene051019:CDS |
| AGAAGGCACCTGATTCCAGG+AGG | 0.717165 | 8.3:+68793949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAATTAAAACATAAA+AGG | + | chr8.3:68793769-68793788 | None:intergenic | 10.0% |
| !! | GAAAAAATTAAAACATAAAA+GGG | + | chr8.3:68793768-68793787 | None:intergenic | 10.0% |
| !!! | TAATTTTTTCTTTTGAAATT+TGG | - | chr8.3:68793778-68793797 | MS.gene051019:intron | 10.0% |
| !!! | TCACTATTTATTTTTATTTA+TGG | - | chr8.3:68792467-68792486 | MS.gene051019:CDS | 10.0% |
| !!! | ACATTTTCCTTTATATTAAA+TGG | + | chr8.3:68794505-68794524 | None:intergenic | 15.0% |
| !! | AAAATTAAACTGTAGCAATA+TGG | + | chr8.3:68793638-68793657 | None:intergenic | 20.0% |
| !! | AAATTAAACTGTAGCAATAT+GGG | + | chr8.3:68793637-68793656 | None:intergenic | 20.0% |
| !! | TTCAAATATTATGATGATCT+AGG | + | chr8.3:68792779-68792798 | None:intergenic | 20.0% |
| !!! | AAGGGTTTTTCATAAAAAAA+TGG | - | chr8.3:68794280-68794299 | MS.gene051019:intron | 20.0% |
| !!! | AATTTTATTACTGTATTTGC+AGG | - | chr8.3:68792823-68792842 | MS.gene051019:intron | 20.0% |
| !!! | ACATTTTTTGTTTCCTTTTT+AGG | - | chr8.3:68793352-68793371 | MS.gene051019:intron | 20.0% |
| !!! | CATTATAAAAAGTATGAACT+TGG | + | chr8.3:68793501-68793520 | None:intergenic | 20.0% |
| !!! | TAAAATTGTTGTTCCAAAAA+GGG | - | chr8.3:68794262-68794281 | MS.gene051019:intron | 20.0% |
| !!! | TTAAAATTGTTGTTCCAAAA+AGG | - | chr8.3:68794261-68794280 | MS.gene051019:intron | 20.0% |
| !!! | TTTTTATGAAAAACCCTTTT+TGG | + | chr8.3:68794278-68794297 | None:intergenic | 20.0% |
| ! | AAACTATACACACTATTAAG+AGG | + | chr8.3:68792679-68792698 | None:intergenic | 25.0% |
| ! | AACAGAATATGTTGAATCTT+TGG | - | chr8.3:68792968-68792987 | MS.gene051019:intron | 25.0% |
| ! | AAGTTGAGATAGTAATAAAC+TGG | + | chr8.3:68793321-68793340 | None:intergenic | 25.0% |
| ! | AGTTGAGATAGTAATAAACT+GGG | + | chr8.3:68793320-68793339 | None:intergenic | 25.0% |
| ! | ATAAATACACAAGAATAGAG+AGG | + | chr8.3:68792556-68792575 | None:intergenic | 25.0% |
| ! | ATAGTAATATCCACCTAAAA+AGG | + | chr8.3:68793368-68793387 | None:intergenic | 25.0% |
| ! | ATGTTTATAGCATGAATTAC+TGG | - | chr8.3:68792618-68792637 | MS.gene051019:CDS | 25.0% |
| ! | CATGGTATGTTATTATGTTA+TGG | - | chr8.3:68793925-68793944 | MS.gene051019:intron | 25.0% |
| ! | CTGAATAATTGTTTCATGAT+TGG | - | chr8.3:68792699-68792718 | MS.gene051019:intron | 25.0% |
| ! | CTGACAATATAGTAGTATTA+AGG | + | chr8.3:68793079-68793098 | None:intergenic | 25.0% |
| ! | TATACTTGTACGCATAATAA+TGG | - | chr8.3:68794409-68794428 | MS.gene051019:intron | 25.0% |
| ! | TCATGCTATAAACATTTCAT+CGG | + | chr8.3:68792613-68792632 | None:intergenic | 25.0% |
| ! | TCTTGTGTATTTATGTATCT+GGG | - | chr8.3:68792562-68792581 | MS.gene051019:CDS | 25.0% |
| ! | TGTTGAGCCATTTAATATAA+AGG | - | chr8.3:68794495-68794514 | MS.gene051019:intron | 25.0% |
| ! | TGTTTATAGCATGAATTACT+GGG | - | chr8.3:68792619-68792638 | MS.gene051019:CDS | 25.0% |
| ! | TTCATATTCTAATTGAACTC+TGG | - | chr8.3:68793952-68793971 | MS.gene051019:intron | 25.0% |
| ! | TTCTTGTGTATTTATGTATC+TGG | - | chr8.3:68792561-68792580 | MS.gene051019:CDS | 25.0% |
| ! | TTGTTTGCTCATAAGATATT+GGG | - | chr8.3:68793997-68794016 | MS.gene051019:CDS | 25.0% |
| ! | TTTGTTTGCTCATAAGATAT+TGG | - | chr8.3:68793996-68794015 | MS.gene051019:CDS | 25.0% |
| !! | AAGCTCTAATATCCAAAAAT+GGG | - | chr8.3:68792943-68792962 | MS.gene051019:intron | 25.0% |
| !! | ATACAACTTTCAAACTTGTT+AGG | - | chr8.3:68794446-68794465 | MS.gene051019:intron | 25.0% |
| !! | ATATTCTGTTTTCCCATTTT+TGG | + | chr8.3:68792958-68792977 | None:intergenic | 25.0% |
| !! | GTAATTTATTTGTTAGCTAG+TGG | - | chr8.3:68793139-68793158 | MS.gene051019:intron | 25.0% |
| !! | TAATTGTTTCATGATTGGTT+AGG | - | chr8.3:68792704-68792723 | MS.gene051019:intron | 25.0% |
| !!! | AGTTTTGAAGTTCTTTTATG+TGG | - | chr8.3:68793736-68793755 | MS.gene051019:intron | 25.0% |
| !!! | CTACAGTTTAATTTTTCTGT+GGG | - | chr8.3:68793643-68793662 | MS.gene051019:intron | 25.0% |
| !!! | TACAGTTTAATTTTTCTGTG+GGG | - | chr8.3:68793644-68793663 | MS.gene051019:intron | 25.0% |
| !!! | TTTTTAGGTGGATATTACTA+TGG | - | chr8.3:68793367-68793386 | MS.gene051019:intron | 25.0% |
| !!! | TTTTTTGTTTCCTTTTTAGG+TGG | - | chr8.3:68793355-68793374 | MS.gene051019:intron | 25.0% |
| AAAAACAAGGATTTCCAACT+TGG | - | chr8.3:68794940-68794959 | MS.gene051019:intron | 30.0% | |
| AGGAGAAAGGAAACATATAT+AGG | + | chr8.3:68792659-68792678 | None:intergenic | 30.0% | |
| AGTAATAACATCATCCAAGT+TGG | + | chr8.3:68794957-68794976 | None:intergenic | 30.0% | |
| AGTATGCTGCATTCATAAAT+TGG | + | chr8.3:68793887-68793906 | None:intergenic | 30.0% | |
| GATTTGTGTTCCACAATTAA+TGG | - | chr8.3:68794703-68794722 | MS.gene051019:intron | 30.0% | |
| TACTATATTGTCAGCAAGAA+AGG | - | chr8.3:68793085-68793104 | MS.gene051019:intron | 30.0% | |
| TATTACTCTTCTCCATCTTT+GGG | - | chr8.3:68794970-68794989 | MS.gene051019:CDS | 30.0% | |
| TCATATCTCAGATTACGTAT+TGG | - | chr8.3:68793192-68793211 | MS.gene051019:intron | 30.0% | |
| TGGGTAACTATGATACAAAT+CGG | + | chr8.3:68793618-68793637 | None:intergenic | 30.0% | |
| TTATTACTCTTCTCCATCTT+TGG | - | chr8.3:68794969-68794988 | MS.gene051019:CDS | 30.0% | |
| ! | AAAAAGAGTGATTTTCCGTA+TGG | + | chr8.3:68794109-68794128 | None:intergenic | 30.0% |
| ! | CAAGCTCTAATATCCAAAAA+TGG | - | chr8.3:68792942-68792961 | MS.gene051019:intron | 30.0% |
| ! | TTGTAAGTTCTTTTACCCAT+TGG | - | chr8.3:68793584-68793603 | MS.gene051019:intron | 30.0% |
| ! | TTTTGCGTTTGTTTACCATA+CGG | - | chr8.3:68794091-68794110 | MS.gene051019:intron | 30.0% |
| !! | CTCTTTGAAATCATTGTTGA+TGG | + | chr8.3:68794143-68794162 | None:intergenic | 30.0% |
| !! | GCTACAGTTTAATTTTTCTG+TGG | - | chr8.3:68793642-68793661 | MS.gene051019:intron | 30.0% |
| !! | TAATTTGCTAAACCTGAGAA+AGG | + | chr8.3:68793235-68793254 | None:intergenic | 30.0% |
| AAGGAAAGAGCCATTAATTG+TGG | + | chr8.3:68794716-68794735 | None:intergenic | 35.0% | |
| ACACACTATTAAGAGGAGAA+AGG | + | chr8.3:68792672-68792691 | None:intergenic | 35.0% | |
| ATCTCAGATTACGTATTGGA+AGG | - | chr8.3:68793196-68793215 | MS.gene051019:intron | 35.0% | |
| ATGATCTAGGCAATTGATAC+AGG | + | chr8.3:68792766-68792785 | None:intergenic | 35.0% | |
| ATTACTCTTCTCCATCTTTG+GGG | - | chr8.3:68794971-68794990 | MS.gene051019:CDS | 35.0% | |
| CAAACAAATGCCATATGAGA+TGG | + | chr8.3:68793984-68794003 | None:intergenic | 35.0% | |
| CAACAAAGACAAGACTACTA+TGG | + | chr8.3:68794389-68794408 | None:intergenic | 35.0% | |
| CATACATCGTGAAGAATAAC+AGG | + | chr8.3:68794534-68794553 | None:intergenic | 35.0% | |
| CTGCACAACAAAATAAGCAT+TGG | + | chr8.3:68792495-68792514 | None:intergenic | 35.0% | |
| GAATATCCTTATAAACCTCC+TGG | - | chr8.3:68793409-68793428 | MS.gene051019:intron | 35.0% | |
| GATAGTAATAAACTGGGTGT+TGG | + | chr8.3:68793314-68793333 | None:intergenic | 35.0% | |
| GGTTTATAAGGATATTCCTG+AGG | + | chr8.3:68793406-68793425 | None:intergenic | 35.0% | |
| TATGAATGCAGCATACTTAC+CGG | - | chr8.3:68793890-68793909 | MS.gene051019:intron | 35.0% | |
| TGGAAAAATCAAGTTTCCTC+AGG | - | chr8.3:68793387-68793406 | MS.gene051019:intron | 35.0% | |
| TGGTTGTATTGTTTGCACTA+GGG | - | chr8.3:68793798-68793817 | MS.gene051019:intron | 35.0% | |
| TTGGTTGTATTGTTTGCACT+AGG | - | chr8.3:68793797-68793816 | MS.gene051019:intron | 35.0% | |
| ! | TCAAGAATATCACTTGGTGA+AGG | + | chr8.3:68792875-68792894 | None:intergenic | 35.0% |
| ! | TTGTTTTCCAAAACAGACCT+CGG | + | chr8.3:68794858-68794877 | None:intergenic | 35.0% |
| !! | AAATCGGTTTGTCTTCCAAT+GGG | + | chr8.3:68793602-68793621 | None:intergenic | 35.0% |
| !! | TTAGCTTGTTCTGTGATCAT+TGG | - | chr8.3:68792523-68792542 | MS.gene051019:CDS | 35.0% |
| ACCCAAAAAACCGCTAAAAG+AGG | + | chr8.3:68794327-68794346 | None:intergenic | 40.0% | |
| AGAAGACTTGAAAAGGGTTG+AGG | - | chr8.3:68794893-68794912 | MS.gene051019:intron | 40.0% | |
| AGCTTATCAACACCTACAAC+AGG | + | chr8.3:68794476-68794495 | None:intergenic | 40.0% | |
| AGGCAAATGCAAGAGTGATA+TGG | + | chr8.3:68794307-68794326 | None:intergenic | 40.0% | |
| ATCCAATGTGGTCTGTATCA+AGG | - | chr8.3:68793701-68793720 | MS.gene051019:intron | 40.0% | |
| ATGAATGCAGCATACTTACC+GGG | - | chr8.3:68793891-68793910 | MS.gene051019:intron | 40.0% | |
| CACAGGAGAAGACTTGAAAA+GGG | - | chr8.3:68794887-68794906 | MS.gene051019:intron | 40.0% | |
| CACATTGGATTCCAACTTTC+AGG | + | chr8.3:68793691-68793710 | None:intergenic | 40.0% | |
| CACCAAGTGATATTCTTGAG+TGG | - | chr8.3:68792876-68792895 | MS.gene051019:intron | 40.0% | |
| CTACAGTGTGTACTTCACAA+AGG | - | chr8.3:68792727-68792746 | MS.gene051019:intron | 40.0% | |
| CTGAAAGTTGGAATCCAATG+TGG | - | chr8.3:68793689-68793708 | MS.gene051019:CDS | 40.0% | |
| CTGATTCCAGGAGGTTTATA+AGG | + | chr8.3:68793418-68793437 | None:intergenic | 40.0% | |
| CTGGTTTCTTCCATCTCATA+TGG | - | chr8.3:68793971-68793990 | MS.gene051019:CDS | 40.0% | |
| CTTATAAACCTCCTGGAATC+AGG | - | chr8.3:68793416-68793435 | MS.gene051019:intron | 40.0% | |
| CTTATCAACACCTACAACAG+GGG | + | chr8.3:68794474-68794493 | None:intergenic | 40.0% | |
| GAAAACAATGTAGAGTCCAC+AGG | - | chr8.3:68794870-68794889 | MS.gene051019:intron | 40.0% | |
| GAAGACTTGAAAAGGGTTGA+GGG | - | chr8.3:68794894-68794913 | MS.gene051019:intron | 40.0% | |
| GAGACATTGCTCAATGTTGA+TGG | + | chr8.3:68794682-68794701 | None:intergenic | 40.0% | |
| GCGAGGAGAAACAAAAAACA+AGG | - | chr8.3:68794927-68794946 | MS.gene051019:intron | 40.0% | |
| GCTTATCAACACCTACAACA+GGG | + | chr8.3:68794475-68794494 | None:intergenic | 40.0% | |
| GGCAAATGCAAGAGTGATAT+GGG | + | chr8.3:68794306-68794325 | None:intergenic | 40.0% | |
| GTAGCATGACAACACCTAAT+GGG | - | chr8.3:68793520-68793539 | MS.gene051019:intron | 40.0% | |
| GTATTGTTTGCACTAGGGAA+TGG | - | chr8.3:68793803-68793822 | MS.gene051019:intron | 40.0% | |
| GTTTCAGCTGTATTGTGTGT+TGG | - | chr8.3:68793278-68793297 | MS.gene051019:intron | 40.0% | |
| TACCATGAATGAAAGAAGCC+CGG | + | chr8.3:68793912-68793931 | None:intergenic | 40.0% | |
| TCAAGAATGCTGCAACAAGA+AGG | + | chr8.3:68793444-68793463 | None:intergenic | 40.0% | |
| TGTAGCATGACAACACCTAA+TGG | - | chr8.3:68793519-68793538 | MS.gene051019:intron | 40.0% | |
| TTGCAGTTCATCCTGAAAGT+TGG | - | chr8.3:68793677-68793696 | MS.gene051019:CDS | 40.0% | |
| ! | AATATCACTTGGTGAAGGAC+GGG | + | chr8.3:68792870-68792889 | None:intergenic | 40.0% |
| ! | ACAGACTTCTCTTTTGCAGA+TGG | - | chr8.3:68794554-68794573 | MS.gene051019:intron | 40.0% |
| ! | CTTGCATTTGCCTCTTTTAG+CGG | - | chr8.3:68794314-68794333 | MS.gene051019:intron | 40.0% |
| ! | GAATATCACTTGGTGAAGGA+CGG | + | chr8.3:68792871-68792890 | None:intergenic | 40.0% |
| ! | GCCTCTTTTAGCGGTTTTTT+GGG | - | chr8.3:68794323-68794342 | MS.gene051019:intron | 40.0% |
| ! | TAAAAGTCCGAGGTCTGTTT+TGG | - | chr8.3:68794848-68794867 | MS.gene051019:intron | 40.0% |
| ! | TGCCTCTTTTAGCGGTTTTT+TGG | - | chr8.3:68794322-68794341 | MS.gene051019:intron | 40.0% |
| !! | ATTGCTCAATGTTGATGGTG+CGG | + | chr8.3:68794677-68794696 | None:intergenic | 40.0% |
| !! | CAAATCGGTTTGTCTTCCAA+TGG | + | chr8.3:68793603-68793622 | None:intergenic | 40.0% |
| !!! | CTTTTAGCGGTTTTTTGGGT+AGG | - | chr8.3:68794327-68794346 | MS.gene051019:intron | 40.0% |
| !!! | GTTTTTTGGGTAGGTTGGTT+GGG | - | chr8.3:68794336-68794355 | MS.gene051019:intron | 40.0% |
| AGTAGTGTTTACACTGCCAG+TGG | + | chr8.3:68794592-68794611 | None:intergenic | 45.0% | |
| CAGTGTGTACTTCACAAAGG+TGG | - | chr8.3:68792730-68792749 | MS.gene051019:intron | 45.0% | |
| CCACAGGAGAAGACTTGAAA+AGG | - | chr8.3:68794886-68794905 | MS.gene051019:intron | 45.0% | |
| CGCCACTCAAGAATATCACT+TGG | + | chr8.3:68792881-68792900 | None:intergenic | 45.0% | |
| CTGGTCAAGATAAAAGTCCG+AGG | - | chr8.3:68794838-68794857 | MS.gene051019:intron | 45.0% | |
| GAAAAGGGTTGAGGGATTGA+AGG | - | chr8.3:68794902-68794921 | MS.gene051019:intron | 45.0% | |
| GACCTTGATACAGACCACAT+TGG | + | chr8.3:68793706-68793725 | None:intergenic | 45.0% | |
| GTAGAACCCATATGACCAAC+TGG | - | chr8.3:68793011-68793030 | MS.gene051019:intron | 45.0% | |
| GTGCTCTATACTCCTTCTGA+AGG | + | chr8.3:68792399-68792418 | None:intergenic | 45.0% | |
| GTTGTACTTCTCCACGTACT+CGG | + | chr8.3:68794766-68794785 | None:intergenic | 45.0% | |
| TACCGGGCTTCTTTCATTCA+TGG | - | chr8.3:68793907-68793926 | MS.gene051019:intron | 45.0% | |
| TACGTATTGGAAGGAAGCGA+GGG | - | chr8.3:68793205-68793224 | MS.gene051019:intron | 45.0% | |
| TGCCATAACAACCCCAAAGA+TGG | + | chr8.3:68794985-68795004 | None:intergenic | 45.0% | |
| TTACGTATTGGAAGGAAGCG+AGG | - | chr8.3:68793204-68793223 | MS.gene051019:intron | 45.0% | |
| TTCCTGAATGTTGCACTGCA+AGG | + | chr8.3:68794735-68794754 | None:intergenic | 45.0% | |
| TTCCTTGCAGTGCAACATTC+AGG | - | chr8.3:68794730-68794749 | MS.gene051019:intron | 45.0% | |
| TTGCGACCAGTTGGTCATAT+GGG | + | chr8.3:68793020-68793039 | None:intergenic | 45.0% | |
| TTGTACTTCTCCACGTACTC+GGG | + | chr8.3:68794765-68794784 | None:intergenic | 45.0% | |
| ! | TTTTGCTAGACGCTGCTTCT+CGG | + | chr8.3:68794619-68794638 | None:intergenic | 45.0% |
| !! | CAAACCTTACTTTTGCTCGC+AGG | - | chr8.3:68793045-68793064 | MS.gene051019:intron | 45.0% |
| !! | CTCCATCTTTGGGGTTGTTA+TGG | - | chr8.3:68794980-68794999 | MS.gene051019:CDS | 45.0% |
| !!! | CCTTTTCAAGTCTTCTCCTG+TGG | + | chr8.3:68794889-68794908 | None:intergenic | 45.0% |
| !!! | GGTTTTTTGGGTAGGTTGGT+TGG | - | chr8.3:68794335-68794354 | MS.gene051019:intron | 45.0% |
| !!! | TAGCGGTTTTTTGGGTAGGT+TGG | - | chr8.3:68794331-68794350 | MS.gene051019:intron | 45.0% |
| AGAGCCTGCGAGCAAAAGTA+AGG | + | chr8.3:68793052-68793071 | None:intergenic | 50.0% | |
| ATGCATCAAGCGCCTTCAGA+AGG | - | chr8.3:68792384-68792403 | MS.gene051019:CDS | 50.0% | |
| ATGGATACCAGTCCAACCAC+TGG | - | chr8.3:68794573-68794592 | MS.gene051019:intron | 50.0% | |
| GCATGACAACACCTAATGGG+CGG | - | chr8.3:68793523-68793542 | MS.gene051019:intron | 50.0% | |
| GGAGCCAGTTTCCCATATTG+TGG | - | chr8.3:68792844-68792863 | MS.gene051019:intron | 50.0% | |
| GTGTTTACACTGCCAGTGGT+TGG | + | chr8.3:68794588-68794607 | None:intergenic | 50.0% | |
| GTTGCGACCAGTTGGTCATA+TGG | + | chr8.3:68793021-68793040 | None:intergenic | 50.0% | |
| TGAAGGACGGGCCACAATAT+GGG | + | chr8.3:68792858-68792877 | None:intergenic | 50.0% | |
| TGTACTTCTCCACGTACTCG+GGG | + | chr8.3:68794764-68794783 | None:intergenic | 50.0% | |
| TGTGTCATGAACCGCCCATT+AGG | + | chr8.3:68793537-68793556 | None:intergenic | 50.0% | |
| TTGAGGGATTGAAGGATGCG+AGG | - | chr8.3:68794910-68794929 | MS.gene051019:intron | 50.0% | |
| TTGTTAGGCTCCCCTGTTGT+AGG | - | chr8.3:68794461-68794480 | MS.gene051019:intron | 50.0% | |
| ! | TGACCAGTCTCTGATGACGT+TGG | + | chr8.3:68794825-68794844 | None:intergenic | 50.0% |
| !! | ACAAGAAGGCACCTGATTCC+AGG | + | chr8.3:68793430-68793449 | None:intergenic | 50.0% |
| !! | TTGGGTAGGTTGGTTGGGAT+GGG | - | chr8.3:68794341-68794360 | MS.gene051019:intron | 50.0% |
| !! | TTTGGGTAGGTTGGTTGGGA+TGG | - | chr8.3:68794340-68794359 | MS.gene051019:intron | 50.0% |
| AGCGAGGGAACACCTTTCTC+AGG | - | chr8.3:68793220-68793239 | MS.gene051019:intron | 55.0% | |
| CAGCCAACGTCATCAGAGAC+TGG | - | chr8.3:68794819-68794838 | MS.gene051019:intron | 55.0% | |
| CGGGCCACAATATGGGAAAC+TGG | + | chr8.3:68792851-68792870 | None:intergenic | 55.0% | |
| GAAGATGTTCCCCGAGTACG+TGG | - | chr8.3:68794752-68794771 | MS.gene051019:intron | 55.0% | |
| GTGAAGGACGGGCCACAATA+TGG | + | chr8.3:68792859-68792878 | None:intergenic | 55.0% | |
| TACACTGCCAGTGGTTGGAC+TGG | + | chr8.3:68794583-68794602 | None:intergenic | 55.0% | |
| TTTGCTGCGTTGCGACCAGT+TGG | + | chr8.3:68793029-68793048 | None:intergenic | 55.0% | |
| !! | AGAAGGCACCTGATTCCAGG+AGG | + | chr8.3:68793427-68793446 | None:intergenic | 55.0% |
| !! | GTAGGTTGGTTGGGATGGGA+GGG | - | chr8.3:68794345-68794364 | MS.gene051019:intron | 55.0% |
| !! | TAGGTTGGTTGGGATGGGAG+GGG | - | chr8.3:68794346-68794365 | MS.gene051019:intron | 55.0% |
| !! | GGTAGGTTGGTTGGGATGGG+AGG | - | chr8.3:68794344-68794363 | MS.gene051019:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 68792370 | 68795025 | 68792370 | ID=MS.gene051019 |
| chr8.3 | mRNA | 68792370 | 68795025 | 68792370 | ID=MS.gene051019.t1;Parent=MS.gene051019 |
| chr8.3 | exon | 68794969 | 68795025 | 68794969 | ID=MS.gene051019.t1.exon1;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68794969 | 68795025 | 68794969 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68794496 | 68794550 | 68794496 | ID=MS.gene051019.t1.exon2;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68794496 | 68794550 | 68794496 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68794154 | 68794192 | 68794154 | ID=MS.gene051019.t1.exon3;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68794154 | 68794192 | 68794154 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68793958 | 68794021 | 68793958 | ID=MS.gene051019.t1.exon4;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68793958 | 68794021 | 68793958 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68793810 | 68793871 | 68793810 | ID=MS.gene051019.t1.exon5;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68793810 | 68793871 | 68793810 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68793673 | 68793712 | 68793673 | ID=MS.gene051019.t1.exon6;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68793673 | 68793712 | 68793673 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68793467 | 68793494 | 68793467 | ID=MS.gene051019.t1.exon7;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68793467 | 68793494 | 68793467 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68792731 | 68792822 | 68792731 | ID=MS.gene051019.t1.exon8;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68792731 | 68792822 | 68792731 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| chr8.3 | exon | 68792370 | 68792655 | 68792370 | ID=MS.gene051019.t1.exon9;Parent=MS.gene051019.t1 |
| chr8.3 | CDS | 68792370 | 68792655 | 68792370 | ID=cds.MS.gene051019.t1;Parent=MS.gene051019.t1 |
| Gene Sequence |
| Protein sequence |
