Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39408.t1 | XP_003608183.2 | 92.3 | 557 | 43 | 0 | 1 | 557 | 1 | 557 | 5.30E-281 | 976.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39408.t1 | G7JQR8 | 92.3 | 557 | 43 | 0 | 1 | 557 | 1 | 557 | 3.8e-281 | 976.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39408.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene39408 | 0.851592 | 8.03E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene39408 | 0.820286 | 7.43E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene39408 | 0.811943 | 5.44E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene39408 | 0.813537 | 2.43E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene39408 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene050737 | MS.gene39408 | 0.839708 | 1.35E-57 | -1.69E-46 |
| MS.gene050941 | MS.gene39408 | 0.85672 | 2.66E-62 | -1.69E-46 |
| MS.gene052519 | MS.gene39408 | 0.821416 | 4.09E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene39408 | 0.843898 | 1.06E-58 | -1.69E-46 |
| MS.gene052896 | MS.gene39408 | 0.8399 | 1.20E-57 | -1.69E-46 |
| MS.gene053008 | MS.gene39408 | 0.854262 | 1.38E-61 | -1.69E-46 |
| MS.gene053146 | MS.gene39408 | 0.816775 | 4.65E-52 | -1.69E-46 |
| MS.gene05350 | MS.gene39408 | 0.819752 | 9.85E-53 | -1.69E-46 |
| MS.gene054582 | MS.gene39408 | 0.828481 | 8.78E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene39408 | 0.82287 | 1.88E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene39408 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene39408 | 0.813754 | 2.18E-51 | -1.69E-46 |
| MS.gene057855 | MS.gene39408 | 0.800785 | 1.22E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene39408 | 0.803348 | 3.64E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene39408 | 0.83216 | 1.11E-55 | -1.69E-46 |
| MS.gene058979 | MS.gene39408 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene059151 | MS.gene39408 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene059283 | MS.gene39408 | 0.851948 | 6.36E-61 | -1.69E-46 |
| MS.gene059842 | MS.gene39408 | 0.828431 | 9.03E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene39408 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene39408 | 0.841929 | 3.53E-58 | -1.69E-46 |
| MS.gene060683 | MS.gene39408 | 0.805459 | 1.32E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene39408 | 0.813342 | 2.69E-51 | -1.69E-46 |
| MS.gene060802 | MS.gene39408 | 0.818165 | 2.26E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene39408 | 0.830354 | 3.08E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39408.t1 | MTR_4g090460 | 95.691 | 557 | 24 | 0 | 1 | 557 | 1 | 557 | 0.0 | 1070 |
| MS.gene39408.t1 | MTR_4g090460 | 95.141 | 391 | 19 | 0 | 167 | 557 | 1 | 391 | 0.0 | 742 |
| MS.gene39408.t1 | MTR_4g090460 | 81.915 | 94 | 17 | 0 | 104 | 197 | 29 | 122 | 6.59e-44 | 160 |
| MS.gene39408.t1 | MTR_2g012600 | 51.250 | 480 | 207 | 11 | 95 | 556 | 275 | 745 | 1.04e-118 | 368 |
| MS.gene39408.t1 | MTR_2g012600 | 61.091 | 275 | 97 | 5 | 9 | 278 | 4 | 273 | 1.02e-92 | 300 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39408.t1 | AT1G61215 | 60.494 | 162 | 56 | 5 | 9 | 166 | 14 | 171 | 1.51e-49 | 178 |
| MS.gene39408.t1 | AT1G61215 | 36.499 | 337 | 171 | 13 | 201 | 514 | 111 | 427 | 7.77e-33 | 131 |
| MS.gene39408.t1 | AT1G61215 | 36.499 | 337 | 171 | 13 | 201 | 514 | 92 | 408 | 1.58e-32 | 130 |
| MS.gene39408.t1 | AT1G61215 | 55.738 | 122 | 47 | 4 | 49 | 166 | 34 | 152 | 6.93e-27 | 114 |
| MS.gene39408.t1 | AT2G42150 | 31.148 | 244 | 133 | 6 | 8 | 239 | 15 | 235 | 8.71e-18 | 87.4 |
| MS.gene39408.t1 | AT2G42150 | 27.820 | 133 | 89 | 3 | 358 | 485 | 273 | 403 | 7.35e-12 | 68.6 |
| MS.gene39408.t1 | AT3G60110 | 30.625 | 160 | 84 | 2 | 4 | 143 | 47 | 199 | 2.33e-15 | 79.7 |
| MS.gene39408.t1 | AT2G44430 | 39.655 | 116 | 47 | 3 | 9 | 101 | 50 | 165 | 3.26e-14 | 76.3 |
| MS.gene39408.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 9.27e-14 | 74.7 |
| MS.gene39408.t1 | AT3G57980 | 37.815 | 119 | 55 | 2 | 8 | 108 | 15 | 132 | 9.57e-14 | 74.7 |
Find 121 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGATCTCGCCTGGTGTTTC+AGG | 0.123019 | 4.2:-21666503 | MS.gene39408:CDS |
| GAGATTACGCCTGGTGTTTC+AGG | 0.146830 | 4.2:-21666230 | MS.gene39408:CDS |
| ACATGTTCTTTCACAGAAAT+TGG | 0.170903 | 4.2:-21666378 | MS.gene39408:CDS |
| ACTCGCTTCATTAATATTTC+TGG | 0.224605 | 4.2:+21666094 | None:intergenic |
| CTGTTGCAATTCTTCATATT+TGG | 0.258493 | 4.2:+21667315 | None:intergenic |
| ACATGGGAGGAGCTTCTTCT+TGG | 0.262308 | 4.2:-21669953 | MS.gene39408:CDS |
| CTCATTCTTGTCAGCCTTGA+GGG | 0.265381 | 4.2:+21666721 | None:intergenic |
| CCTTTGCAACATTAATCTTC+TGG | 0.292069 | 4.2:+21664913 | None:intergenic |
| ACCACCAGTACTAGGCTTCT+TGG | 0.302528 | 4.2:+21664848 | None:intergenic |
| CTTATATTGACGGGTGTTCT+TGG | 0.307524 | 4.2:+21665064 | None:intergenic |
| TTCATAAGATTCGGAGTTGC+AGG | 0.312088 | 4.2:+21664750 | None:intergenic |
| GAATTGCAACAGCGCTATTC+AGG | 0.321488 | 4.2:-21667304 | MS.gene39408:CDS |
| TGTGAAGGAACATCTAATTC+TGG | 0.326164 | 4.2:+21666659 | None:intergenic |
| TGTGAAAGAACATGTGATTC+TGG | 0.329828 | 4.2:+21666386 | None:intergenic |
| GGTGAGGTTGTCAAATCTTC+TGG | 0.339149 | 4.2:-21666008 | MS.gene39408:CDS |
| ACATGGACTTTGACACTATA+AGG | 0.354571 | 4.2:-21665175 | MS.gene39408:CDS |
| TTCATTTCCTTCATAAGATT+CGG | 0.356180 | 4.2:+21664741 | None:intergenic |
| GGAGAACACGAACTTGAAAA+AGG | 0.362922 | 4.2:-21665976 | MS.gene39408:CDS |
| GAGAAATCAGAAGATTCAAT+TGG | 0.363491 | 4.2:-21667022 | MS.gene39408:CDS |
| AGCAGAGCTTAAGCGAGCTT+TGG | 0.364114 | 4.2:-21667044 | MS.gene39408:CDS |
| CAGAAGACATTGCTGGAACT+TGG | 0.372442 | 4.2:+21666261 | None:intergenic |
| GACAACCTCACCACAGTTGC+TGG | 0.380777 | 4.2:+21666019 | None:intergenic |
| TGGGAGGAGCTTCTTCTTGG+TGG | 0.399007 | 4.2:-21669950 | MS.gene39408:CDS |
| GGTTACAAGGGCGGACGCTT+GGG | 0.402294 | 4.2:+21664934 | None:intergenic |
| ATTCAAAACTTTCTCATGTT+CGG | 0.403224 | 4.2:+21666202 | None:intergenic |
| TTCTTGGTGGAGCTGTTATC+CGG | 0.405630 | 4.2:-21669937 | MS.gene39408:CDS |
| TCCGGCACGGCACTGGTGAT+TGG | 0.416103 | 4.2:-21669919 | MS.gene39408:CDS |
| CACTGCTAGGGCTTGGTATG+AGG | 0.418968 | 4.2:-21667086 | MS.gene39408:intron |
| TCTTTACTACCACCAGTACT+AGG | 0.419066 | 4.2:+21664840 | None:intergenic |
| TCAAAGGATGGGCTATCTGC+TGG | 0.419315 | 4.2:-21666599 | MS.gene39408:CDS |
| CACATCAAACCGATACAAAC+TGG | 0.424104 | 4.2:-21666568 | MS.gene39408:CDS |
| AAAGGAGAGGAAAGAGAAAG+AGG | 0.432152 | 4.2:-21666127 | MS.gene39408:CDS |
| TGGTTACAAGGGCGGACGCT+TGG | 0.439637 | 4.2:+21664933 | None:intergenic |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.2:+21666254 | None:intergenic |
| ATGTCTTCAGAAGACATTGC+TGG | 0.442846 | 4.2:+21666527 | None:intergenic |
| ACATTAATCTTCTGGTTACA+AGG | 0.444554 | 4.2:+21664921 | None:intergenic |
| CAGAAGACATTGCTGGAACC+TGG | 0.448111 | 4.2:+21666534 | None:intergenic |
| TGTCAAAGTCCATGTGTCTC+TGG | 0.448970 | 4.2:+21665183 | None:intergenic |
| GCTGTTATCCGGCACGGCAC+TGG | 0.459398 | 4.2:-21669926 | MS.gene39408:CDS |
| GATGGCAGCGATCCTGCCTC+GGG | 0.461840 | 4.2:-21664885 | MS.gene39408:CDS |
| GACAGCTTTCTTGATGTGTA+AGG | 0.464881 | 4.2:+21664794 | None:intergenic |
| CGATGGCAGCGATCCTGCCT+CGG | 0.469474 | 4.2:-21664886 | MS.gene39408:CDS |
| TAAAGAGAATTCTCCGTCTT+CGG | 0.474363 | 4.2:-21664823 | MS.gene39408:CDS |
| AGATCTCGCCTGGTGTTTCA+GGG | 0.481234 | 4.2:-21666502 | MS.gene39408:CDS |
| TGGTAGAACTTTCTTTCAGC+CGG | 0.484226 | 4.2:+21666039 | None:intergenic |
| ACTAAAGAGTTGTCAAAGGA+TGG | 0.489392 | 4.2:-21666611 | MS.gene39408:CDS |
| AGAAATCAGAAGATTCAATT+GGG | 0.490341 | 4.2:-21667021 | MS.gene39408:intron |
| ACCAATCACCAGTGCCGTGC+CGG | 0.491886 | 4.2:+21669918 | None:intergenic |
| AAATGAAGGAAAAGAAAAGA+CGG | 0.493555 | 4.2:-21664725 | MS.gene39408:CDS |
| CTTGTTGACAACAACTCAGT+TGG | 0.494073 | 4.2:-21666683 | MS.gene39408:CDS |
| AGATTACGCCTGGTGTTTCA+GGG | 0.501278 | 4.2:-21666229 | MS.gene39408:CDS |
| AAAAGAAAAGACGGAGAACT+AGG | 0.503354 | 4.2:-21664716 | MS.gene39408:CDS |
| TCTCATTCTTGTCAGCCTTG+AGG | 0.505573 | 4.2:+21666720 | None:intergenic |
| CTGTCGCAAGCATGATAGCC+AGG | 0.522128 | 4.2:-21665889 | MS.gene39408:intron |
| GAAGACATGGAGATCTCGCC+TGG | 0.524803 | 4.2:-21666512 | MS.gene39408:CDS |
| AGCGGAAGTGATTGTGACGT+GGG | 0.526318 | 4.2:-21669978 | MS.gene39408:CDS |
| ACTAAAGAGACGTCAAAGGA+TGG | 0.530356 | 4.2:-21666338 | MS.gene39408:CDS |
| GATAAGTTGACAGATACAGC+TGG | 0.532080 | 4.2:-21666449 | MS.gene39408:CDS |
| GAGAGGAAAGAGAAAGAGGA+AGG | 0.532691 | 4.2:-21666123 | MS.gene39408:CDS |
| GAATCTTATGAAGGAAATGA+AGG | 0.534107 | 4.2:-21664739 | MS.gene39408:CDS |
| GGTAGAACTTTCTTTCAGCC+GGG | 0.535651 | 4.2:+21666040 | None:intergenic |
| TCAAAGGATGGGTTATCTGC+TGG | 0.536634 | 4.2:-21666326 | MS.gene39408:CDS |
| CAACAAAACAATTGATTCAG+TGG | 0.544548 | 4.2:-21665141 | MS.gene39408:CDS |
| TCGTCGCGGCGGAGCTCCGA+GGG | 0.544805 | 4.2:-21669892 | MS.gene39408:CDS |
| AAACTGGTCTCATGAATGCC+AGG | 0.546467 | 4.2:-21666552 | MS.gene39408:CDS |
| GTAGAACAGCAAAGCATTGG+TGG | 0.547197 | 4.2:+21665088 | None:intergenic |
| TCGGAGCTCCGCCGCGACGA+CGG | 0.548546 | 4.2:+21669895 | None:intergenic |
| TGCAACTCCGAATCTTATGA+AGG | 0.548743 | 4.2:-21664748 | MS.gene39408:CDS |
| CAAAGGATGGGCTATCTGCT+GGG | 0.550496 | 4.2:-21666598 | MS.gene39408:CDS |
| TTCATGAGACCAGTTTGTAT+CGG | 0.551753 | 4.2:+21666559 | None:intergenic |
| CCAGAAGATTAATGTTGCAA+AGG | 0.552998 | 4.2:-21664913 | MS.gene39408:CDS |
| GGAGTAGAACAGCAAAGCAT+TGG | 0.553418 | 4.2:+21665085 | None:intergenic |
| ACGCTTGGGACTTTCAAAGA+AGG | 0.559438 | 4.2:+21664948 | None:intergenic |
| AAAGCCAAGAAGCCTAGTAC+TGG | 0.562628 | 4.2:-21664852 | MS.gene39408:CDS |
| GTCGTCGCGGCGGAGCTCCG+AGG | 0.563753 | 4.2:-21669893 | MS.gene39408:CDS |
| GAAGACATGGAGATTACGCC+TGG | 0.563944 | 4.2:-21666239 | MS.gene39408:CDS |
| CGAGGCAGGATCGCTGCCAT+CGG | 0.565755 | 4.2:+21664887 | None:intergenic |
| GGATGGAACAAAAGATCTGA+TGG | 0.571088 | 4.2:-21665955 | MS.gene39408:CDS |
| CTAAAGAGTTGTCAAAGGAT+GGG | 0.572945 | 4.2:-21666610 | MS.gene39408:CDS |
| TGTAAGGATTTCACCGAAGA+CGG | 0.573201 | 4.2:+21664810 | None:intergenic |
| TAGTGCAGACTTATATTGAC+GGG | 0.575938 | 4.2:+21665055 | None:intergenic |
| GGTGTAATAGCGGAAGGAGA+AGG | 0.576294 | 4.2:+21669863 | None:intergenic |
| GGTGGAGCTGTTATCCGGCA+CGG | 0.577297 | 4.2:-21669932 | MS.gene39408:CDS |
| ACTCTCTCTAATTTCTGTGA+AGG | 0.579129 | 4.2:+21666644 | None:intergenic |
| CTAAAGAGACGTCAAAGGAT+GGG | 0.581958 | 4.2:-21666337 | MS.gene39408:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.2:-21666252 | MS.gene39408:CDS |
| AGCAATGTCTTCTGAAGACA+TGG | 0.586266 | 4.2:-21666525 | MS.gene39408:CDS |
| ACCTCGGGTGTAATAGCGGA+AGG | 0.590376 | 4.2:+21669857 | None:intergenic |
| TTCTACTAAAGAGTTGTCAA+AGG | 0.593159 | 4.2:-21666615 | MS.gene39408:CDS |
| AAGGAGAAGGAGTTCTCCCT+CGG | 0.596440 | 4.2:+21669876 | None:intergenic |
| TTTGATAGCAGAAGCGACAA+AGG | 0.602191 | 4.2:-21665220 | MS.gene39408:intron |
| TCCTTCCGCTATTACACCCG+AGG | 0.606450 | 4.2:-21669858 | MS.gene39408:intron |
| ATCAAAGCTTGAATCCCTCA+AGG | 0.606788 | 4.2:-21666735 | MS.gene39408:CDS |
| TTGACAGAGACTGTATATGA+AGG | 0.607121 | 4.2:-21666170 | MS.gene39408:CDS |
| GAGCGGAAGTGATTGTGACG+TGG | 0.615869 | 4.2:-21669979 | MS.gene39408:CDS |
| CATTAATCTTCTGGTTACAA+GGG | 0.620404 | 4.2:+21664922 | None:intergenic |
| CACATCAAGAAAGCTGTCGG+TGG | 0.621814 | 4.2:-21664789 | MS.gene39408:CDS |
| TATTACCTCGGGTGTAATAG+CGG | 0.621851 | 4.2:+21669853 | None:intergenic |
| TGGTGATTGGTCCGTCGTCG+CGG | 0.623067 | 4.2:-21669906 | MS.gene39408:CDS |
| GAAAGTTCTACCAGCAACTG+TGG | 0.627439 | 4.2:-21666029 | MS.gene39408:CDS |
| GCCAAGAAGCCTAGTACTGG+TGG | 0.629237 | 4.2:-21664849 | MS.gene39408:CDS |
| TCAATAGACCCTGAAACACC+AGG | 0.632152 | 4.2:+21666494 | None:intergenic |
| TTCAACTAAAGAGACGTCAA+AGG | 0.633541 | 4.2:-21666342 | MS.gene39408:CDS |
| GTAGTGCAGACTTATATTGA+CGG | 0.634239 | 4.2:+21665054 | None:intergenic |
| TCGGTTGACCCTGAAACACC+AGG | 0.635035 | 4.2:+21666221 | None:intergenic |
| TAATCTTCTGGTTACAAGGG+CGG | 0.635573 | 4.2:+21664925 | None:intergenic |
| TTCTACCAGCAACTGTGGTG+AGG | 0.636519 | 4.2:-21666024 | MS.gene39408:CDS |
| CAAATCTTCTGGTGTAACTG+AGG | 0.640200 | 4.2:-21665997 | MS.gene39408:CDS |
| TTACACATCAAGAAAGCTGT+CGG | 0.641394 | 4.2:-21664792 | MS.gene39408:CDS |
| ATAAGTTGACAGATACAGCT+GGG | 0.644236 | 4.2:-21666448 | MS.gene39408:CDS |
| AATGTTGCAAAGGTAGCCGA+TGG | 0.645708 | 4.2:-21664903 | MS.gene39408:CDS |
| GCGGAAGTGATTGTGACGTG+GGG | 0.650849 | 4.2:-21669977 | MS.gene39408:CDS |
| TGGCAGCGATCCTGCCTCGG+GGG | 0.651961 | 4.2:-21664883 | MS.gene39408:CDS |
| ATGGCAGCGATCCTGCCTCG+GGG | 0.654156 | 4.2:-21664884 | MS.gene39408:CDS |
| GAGACTGTATATGAAGGACA+TGG | 0.658527 | 4.2:-21666164 | MS.gene39408:CDS |
| CTGTATATGAAGGACATGGA+GGG | 0.672772 | 4.2:-21666160 | MS.gene39408:CDS |
| GCAGTTAATCCAGAGACACA+TGG | 0.675440 | 4.2:-21665192 | MS.gene39408:CDS |
| ACTGTATATGAAGGACATGG+AGG | 0.676971 | 4.2:-21666161 | MS.gene39408:CDS |
| CACGTGTACGAAGATGGGAG+CGG | 0.678942 | 4.2:-21669996 | None:intergenic |
| CGGAAGTGATTGTGACGTGG+GGG | 0.689342 | 4.2:-21669976 | MS.gene39408:CDS |
| TGATTGGTCCGTCGTCGCGG+CGG | 0.715637 | 4.2:-21669903 | MS.gene39408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTTTTTATTTATTTTT+AGG | + | chr4.2:21666211-21666230 | None:intergenic | 0.0% |
| !! | AAAATGCTAAAATATATTAA+TGG | - | chr4.2:21665783-21665802 | MS.gene39408:intron | 10.0% |
| !! | AACATATTTAAATAAAAAGA+TGG | - | chr4.2:21666121-21666140 | MS.gene39408:CDS | 10.0% |
| !! | AATATTAATATTTATTACCT+CGG | + | chr4.2:21664855-21664874 | None:intergenic | 10.0% |
| !! | ATTCAAACATAATTTAATAT+TGG | - | chr4.2:21664948-21664967 | MS.gene39408:CDS | 10.0% |
| !!! | TAGTTTAAATTTTAAATGAT+CGG | - | chr4.2:21666906-21666925 | MS.gene39408:intron | 10.0% |
| !!! | TCTTTTTATTTAAATATGTT+AGG | + | chr4.2:21666121-21666140 | None:intergenic | 10.0% |
| !!! | TTTTTATCATAAACTAAATT+GGG | + | chr4.2:21665105-21665124 | None:intergenic | 10.0% |
| !!! | TTTTTATTTATTTTTAGGAT+GGG | + | chr4.2:21666206-21666225 | None:intergenic | 10.0% |
| !!! | TTTTTTATCATAAACTAAAT+TGG | + | chr4.2:21665106-21665125 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTATTTTTAGGA+TGG | + | chr4.2:21666207-21666226 | None:intergenic | 10.0% |
| !! | AAATTTATAATCATCCAAAT+TGG | + | chr4.2:21669169-21669188 | None:intergenic | 15.0% |
| !! | ATATTAATATTTATTACCTC+GGG | + | chr4.2:21664854-21664873 | None:intergenic | 15.0% |
| !! | CATTGTATTATATGATAATA+TGG | - | chr4.2:21667584-21667603 | MS.gene39408:intron | 15.0% |
| !! | GCTTATATGAATTAATATTT+GGG | - | chr4.2:21666568-21666587 | MS.gene39408:CDS | 15.0% |
| !! | GTAATAATAATGTAATGTAA+CGG | + | chr4.2:21664988-21665007 | None:intergenic | 15.0% |
| !! | TACATTACATTATTATTACA+TGG | - | chr4.2:21664989-21665008 | MS.gene39408:CDS | 15.0% |
| !! | TTATTGAATTGAATTGAATA+TGG | - | chr4.2:21665489-21665508 | MS.gene39408:intron | 15.0% |
| !!! | AATTTTAAATGATCAGTTTT+TGG | - | chr4.2:21667006-21667025 | MS.gene39408:intron | 15.0% |
| !!! | ATAATGTTTTTGATGATAAT+AGG | - | chr4.2:21668884-21668903 | MS.gene39408:intron | 15.0% |
| !!! | ATATGCTTTTTAATTAAATC+TGG | - | chr4.2:21666769-21666788 | MS.gene39408:intron | 15.0% |
| !!! | ATGATATAGATTGATAATTT+AGG | - | chr4.2:21666520-21666539 | MS.gene39408:CDS | 15.0% |
| !!! | ATTTTTCATTCATTTTCAAA+TGG | - | chr4.2:21665813-21665832 | MS.gene39408:intron | 15.0% |
| !!! | GTCATAGTTTTTTTTTTTAT+TGG | - | chr4.2:21665935-21665954 | MS.gene39408:CDS | 15.0% |
| !!! | TACTATTATGTTTCTATATT+TGG | - | chr4.2:21669122-21669141 | MS.gene39408:intron | 15.0% |
| !!! | TGATATAGATTGATAATTTA+GGG | - | chr4.2:21666521-21666540 | MS.gene39408:CDS | 15.0% |
| !!! | TTTTATTTATTTTTAGGATG+GGG | + | chr4.2:21666205-21666224 | None:intergenic | 15.0% |
| !!! | TTTTTCATTCATTTTCAAAT+GGG | - | chr4.2:21665814-21665833 | MS.gene39408:intron | 15.0% |
| !! | AAAAAAAACAATATTACACC+TGG | - | chr4.2:21665123-21665142 | MS.gene39408:CDS | 20.0% |
| !! | AAAACTGAAAAATCAACTAA+AGG | + | chr4.2:21668855-21668874 | None:intergenic | 20.0% |
| !! | AAACTGAAAAATCAACTAAA+GGG | + | chr4.2:21668854-21668873 | None:intergenic | 20.0% |
| !! | AATAAAATCAACAGTTGAAA+AGG | + | chr4.2:21667321-21667340 | None:intergenic | 20.0% |
| !! | AGTTTAATGAATTGTTAATC+AGG | + | chr4.2:21665016-21665035 | None:intergenic | 20.0% |
| !! | ATACAACAAATTGAATAAAG+TGG | + | chr4.2:21665630-21665649 | None:intergenic | 20.0% |
| !! | ATCATTATTAAACACCAATT+TGG | - | chr4.2:21669152-21669171 | MS.gene39408:intron | 20.0% |
| !! | ATCTGTTTAATGTTTAAGAA+AGG | + | chr4.2:21666285-21666304 | None:intergenic | 20.0% |
| !! | ATTTAACTCGTTATAATAGA+GGG | + | chr4.2:21665256-21665275 | None:intergenic | 20.0% |
| !! | CATTATATCATATATGCATA+TGG | - | chr4.2:21665650-21665669 | MS.gene39408:intron | 20.0% |
| !! | GGCTTATATGAATTAATATT+TGG | - | chr4.2:21666567-21666586 | MS.gene39408:CDS | 20.0% |
| !! | TATCATCAAAAACATTATTG+AGG | + | chr4.2:21668882-21668901 | None:intergenic | 20.0% |
| !! | TATTAAAGATGAAATGCAAA+TGG | + | chr4.2:21668925-21668944 | None:intergenic | 20.0% |
| !! | TGCTTAAAAGAAAATACTTT+AGG | - | chr4.2:21666663-21666682 | MS.gene39408:CDS | 20.0% |
| !! | TTTATCATGAAATAAATACC+AGG | + | chr4.2:21665144-21665163 | None:intergenic | 20.0% |
| !!! | AATTTTAAATGATCGGTTTT+TGG | - | chr4.2:21666913-21666932 | MS.gene39408:intron | 20.0% |
| !!! | GTTTATTTTGTTCCTAAATT+TGG | - | chr4.2:21667287-21667306 | MS.gene39408:intron | 20.0% |
| !!! | TATTTTTTTTCTTCCACATT+AGG | - | chr4.2:21668947-21668966 | MS.gene39408:intron | 20.0% |
| !!! | TTGTTCTAAGTATTTGTTAA+CGG | - | chr4.2:21665701-21665720 | MS.gene39408:intron | 20.0% |
| !!! | TTTTCCAAAATAAGTTTGTT+TGG | + | chr4.2:21669056-21669075 | None:intergenic | 20.0% |
| !!! | TTTTCGTCAATGTAAATATA+GGG | - | chr4.2:21669222-21669241 | MS.gene39408:intron | 20.0% |
| !!! | TTTTTCGTCAATGTAAATAT+AGG | - | chr4.2:21669221-21669240 | MS.gene39408:intron | 20.0% |
| ! | AAATGAAGGAAAAGAAAAGA+CGG | - | chr4.2:21669968-21669987 | MS.gene39408:CDS | 25.0% |
| ! | AACAAGATACAAAGAAAAAG+AGG | - | chr4.2:21666337-21666356 | MS.gene39408:CDS | 25.0% |
| ! | ACAAAATAAACCTAACAAGA+AGG | + | chr4.2:21667278-21667297 | None:intergenic | 25.0% |
| ! | ACAAACATTTCTAAGTTCTA+AGG | - | chr4.2:21666075-21666094 | MS.gene39408:CDS | 25.0% |
| ! | ACATTAGGCAATGAAAAATT+TGG | - | chr4.2:21668962-21668981 | MS.gene39408:intron | 25.0% |
| ! | AGAAATCAGAAGATTCAATT+GGG | - | chr4.2:21667672-21667691 | MS.gene39408:intron | 25.0% |
| ! | AGATTCAAACCAAGAATAAA+AGG | + | chr4.2:21669262-21669281 | None:intergenic | 25.0% |
| ! | ATAACTTAGCATAGTAATTG+AGG | + | chr4.2:21665889-21665908 | None:intergenic | 25.0% |
| ! | ATTACCAAAGTAATCAAAAC+CGG | + | chr4.2:21666866-21666885 | None:intergenic | 25.0% |
| ! | ATTACTATGCTAAGTTATGT+TGG | - | chr4.2:21665891-21665910 | MS.gene39408:CDS | 25.0% |
| ! | ATTCAAAACTTTCTCATGTT+CGG | + | chr4.2:21668221-21668240 | None:intergenic | 25.0% |
| ! | CTAAATCTCAATTGTTTCAT+AGG | - | chr4.2:21666032-21666051 | MS.gene39408:CDS | 25.0% |
| ! | GAAATAAAGAATGATAAGAG+TGG | + | chr4.2:21667216-21667235 | None:intergenic | 25.0% |
| ! | GATTTAACTCGTTATAATAG+AGG | + | chr4.2:21665257-21665276 | None:intergenic | 25.0% |
| ! | TACAATGAGATATACTATAC+AGG | + | chr4.2:21667571-21667590 | None:intergenic | 25.0% |
| ! | TATTGTCAAAGAAAAACTGA+CGG | - | chr4.2:21669672-21669691 | MS.gene39408:intron | 25.0% |
| ! | TCGTAAACAATTTCAAAAGT+AGG | + | chr4.2:21669393-21669412 | None:intergenic | 25.0% |
| ! | TGTGTTATATGCAATAACTT+TGG | - | chr4.2:21666952-21666971 | MS.gene39408:intron | 25.0% |
| ! | TTAGAACTTAGAAATGTTTG+TGG | + | chr4.2:21666076-21666095 | None:intergenic | 25.0% |
| ! | TTAGGGTTATTTGATAGATT+GGG | - | chr4.2:21666538-21666557 | MS.gene39408:CDS | 25.0% |
| ! | TTATTATTGCTCACATTCTT+CGG | + | chr4.2:21665429-21665448 | None:intergenic | 25.0% |
| ! | TTCATTTCCTTCATAAGATT+CGG | + | chr4.2:21669955-21669974 | None:intergenic | 25.0% |
| !! | AAATTTTTCATTGCCTAATG+TGG | + | chr4.2:21668963-21668982 | None:intergenic | 25.0% |
| !! | TCTTTTGATCCTTTTATTCT+TGG | - | chr4.2:21669250-21669269 | MS.gene39408:intron | 25.0% |
| !! | TGAACCAAACAAACTTATTT+TGG | - | chr4.2:21669049-21669068 | MS.gene39408:intron | 25.0% |
| !! | TTGTTTAAATTTTCCCAACT+TGG | - | chr4.2:21667447-21667466 | MS.gene39408:intron | 25.0% |
| !! | TTTAGGGTTATTTGATAGAT+TGG | - | chr4.2:21666537-21666556 | MS.gene39408:CDS | 25.0% |
| !!! | AACAAAAAGAGTGTTCTATT+TGG | - | chr4.2:21665539-21665558 | MS.gene39408:intron | 25.0% |
| !!! | ACATGAAACTAGTTTTTGTT+TGG | + | chr4.2:21669092-21669111 | None:intergenic | 25.0% |
| !!! | CAGTTTTTGGTTTATTTTGA+TGG | - | chr4.2:21667019-21667038 | MS.gene39408:intron | 25.0% |
| !!! | CTTTTGAAATTGTTTACGAA+TGG | - | chr4.2:21669394-21669413 | MS.gene39408:intron | 25.0% |
| !!! | GATTCTGTTTTGGAAATTAA+AGG | - | chr4.2:21668769-21668788 | MS.gene39408:intron | 25.0% |
| !!! | TAGTGAATTATCATTTTTGC+AGG | - | chr4.2:21667346-21667365 | MS.gene39408:intron | 25.0% |
| !!! | TTTTGGTTTATTTTGATGGT+GGG | - | chr4.2:21667023-21667042 | MS.gene39408:CDS | 25.0% |
| !!! | TTTTTGGTTTATTTTGATGG+TGG | - | chr4.2:21667022-21667041 | MS.gene39408:CDS | 25.0% |
| AAAATTGTGTTCTCTTGACA+AGG | - | chr4.2:21665367-21665386 | MS.gene39408:intron | 30.0% | |
| ACAAAGAAAAAGAGGAACTT+GGG | - | chr4.2:21666345-21666364 | MS.gene39408:CDS | 30.0% | |
| ACATGTTCTTTCACAGAAAT+TGG | - | chr4.2:21668315-21668334 | MS.gene39408:intron | 30.0% | |
| ACTCGCTTCATTAATATTTC+TGG | + | chr4.2:21668602-21668621 | None:intergenic | 30.0% | |
| ATGTGCTTAAAATAGAGGTT+TGG | + | chr4.2:21665727-21665746 | None:intergenic | 30.0% | |
| ATTTGATAGATTGGGCATTT+AGG | - | chr4.2:21666546-21666565 | MS.gene39408:CDS | 30.0% | |
| CTGTTGCAATTCTTCATATT+TGG | + | chr4.2:21667381-21667400 | None:intergenic | 30.0% | |
| GAATCTTATGAAGGAAATGA+AGG | - | chr4.2:21669954-21669973 | MS.gene39408:CDS | 30.0% | |
| GACATAATCTCAGCTTAAAA+AGG | + | chr4.2:21667720-21667739 | None:intergenic | 30.0% | |
| GAGAAATCAGAAGATTCAAT+TGG | - | chr4.2:21667671-21667690 | MS.gene39408:intron | 30.0% | |
| TAAATTGCAAGTCTCTATTC+TGG | - | chr4.2:21665300-21665319 | MS.gene39408:intron | 30.0% | |
| TACAAAGAAAAAGAGGAACT+TGG | - | chr4.2:21666344-21666363 | MS.gene39408:CDS | 30.0% | |
| TGTGTGTAAACCTATAGATT+TGG | + | chr4.2:21667811-21667830 | None:intergenic | 30.0% | |
| TTAAAGCAATGCATGATGTA+TGG | - | chr4.2:21665516-21665535 | MS.gene39408:intron | 30.0% | |
| TTCTACTAAAGAGTTGTCAA+AGG | - | chr4.2:21668078-21668097 | MS.gene39408:intron | 30.0% | |
| TTTGCGTATACAATGGTTAT+GGG | - | chr4.2:21665571-21665590 | MS.gene39408:intron | 30.0% | |
| ! | ACATTAATCTTCTGGTTACA+AGG | + | chr4.2:21669775-21669794 | None:intergenic | 30.0% |
| ! | ATCAGAGTAAAAACCCATTT+TGG | - | chr4.2:21665065-21665084 | MS.gene39408:CDS | 30.0% |
| ! | CAACAAAACAATTGATTCAG+TGG | - | chr4.2:21669552-21669571 | MS.gene39408:intron | 30.0% |
| ! | CATTAATCTTCTGGTTACAA+GGG | + | chr4.2:21669774-21669793 | None:intergenic | 30.0% |
| ! | CTAACAGCTTGATTTTGTTA+GGG | - | chr4.2:21665276-21665295 | MS.gene39408:intron | 30.0% |
| ! | CTCTATTCTGGCTATTAATT+CGG | - | chr4.2:21665312-21665331 | MS.gene39408:intron | 30.0% |
| ! | TAACTGTACATCTTTGTTTC+AGG | - | chr4.2:21667927-21667946 | MS.gene39408:intron | 30.0% |
| ! | TCTAACAGCTTGATTTTGTT+AGG | - | chr4.2:21665275-21665294 | MS.gene39408:intron | 30.0% |
| ! | TTTTGCGTATACAATGGTTA+TGG | - | chr4.2:21665570-21665589 | MS.gene39408:intron | 30.0% |
| !! | AAACCTCTATTTTAAGCACA+TGG | - | chr4.2:21665726-21665745 | MS.gene39408:intron | 30.0% |
| !! | ATTTTTCAATTGATGTGTCC+CGG | - | chr4.2:21668635-21668654 | MS.gene39408:intron | 30.0% |
| !!! | AACAAGTTTTTTGAAGCATG+CGG | + | chr4.2:21666597-21666616 | None:intergenic | 30.0% |
| !!! | AGTTCTAAGGAACTTTTCAT+TGG | - | chr4.2:21666088-21666107 | MS.gene39408:CDS | 30.0% |
| !!! | ATGGAGGGTGTTTTAAAAAA+AGG | - | chr4.2:21668548-21668567 | MS.gene39408:intron | 30.0% |
| !!! | TATTTATTTTTAGGATGGGG+TGG | + | chr4.2:21666202-21666221 | None:intergenic | 30.0% |
| AAAAAGATGTAGTGCCAAGT+TGG | + | chr4.2:21667464-21667483 | None:intergenic | 35.0% | |
| AAAAGAAAAGACGGAGAACT+AGG | - | chr4.2:21669977-21669996 | MS.gene39408:CDS | 35.0% | |
| AAAAGATGTAGTGCCAAGTT+GGG | + | chr4.2:21667463-21667482 | None:intergenic | 35.0% | |
| AAAGATGGTGTATAACCATG+TGG | - | chr4.2:21666136-21666155 | MS.gene39408:CDS | 35.0% | |
| AACACGAACTTGAAAAAGGA+TGG | - | chr4.2:21668721-21668740 | MS.gene39408:intron | 35.0% | |
| AAGCCATGTGCTTAAAATAG+AGG | + | chr4.2:21665732-21665751 | None:intergenic | 35.0% | |
| AAGGCATGTGTTCCAAATTT+AGG | + | chr4.2:21667302-21667321 | None:intergenic | 35.0% | |
| AATAGAGGGACTAATGTGTT+CGG | + | chr4.2:21665242-21665261 | None:intergenic | 35.0% | |
| AATTAAATCTGGTTGAACCC+CGG | - | chr4.2:21666780-21666799 | MS.gene39408:intron | 35.0% | |
| ACATGATGTGATTGTGTTTG+AGG | - | chr4.2:21666398-21666417 | MS.gene39408:CDS | 35.0% | |
| ACATGGACTTTGACACTATA+AGG | - | chr4.2:21669518-21669537 | MS.gene39408:intron | 35.0% | |
| ACTAAAGAGTTGTCAAAGGA+TGG | - | chr4.2:21668082-21668101 | MS.gene39408:intron | 35.0% | |
| ACTCTCTCTAATTTCTGTGA+AGG | + | chr4.2:21668052-21668071 | None:intergenic | 35.0% | |
| AGATTTCTATGATCCACTGT+TGG | - | chr4.2:21667881-21667900 | MS.gene39408:intron | 35.0% | |
| ATATATGCATATGGTCGTTG+AGG | - | chr4.2:21665659-21665678 | MS.gene39408:intron | 35.0% | |
| ATGATAATATGGCACTGCTA+GGG | - | chr4.2:21667595-21667614 | MS.gene39408:intron | 35.0% | |
| CCAGAAGATTAATGTTGCAA+AGG | - | chr4.2:21669780-21669799 | MS.gene39408:intron | 35.0% | |
| CCTTTGCAACATTAATCTTC+TGG | + | chr4.2:21669783-21669802 | None:intergenic | 35.0% | |
| CTAAAGAGTTGTCAAAGGAT+GGG | - | chr4.2:21668083-21668102 | MS.gene39408:intron | 35.0% | |
| GAAATGTCGACCAAATCTAT+AGG | - | chr4.2:21667798-21667817 | MS.gene39408:intron | 35.0% | |
| GATTGTGTTTGAGGAATGAA+TGG | - | chr4.2:21666407-21666426 | MS.gene39408:CDS | 35.0% | |
| GTAGTGCAGACTTATATTGA+CGG | + | chr4.2:21669642-21669661 | None:intergenic | 35.0% | |
| TAAACCTAACAAGAAGGCTT+TGG | + | chr4.2:21667272-21667291 | None:intergenic | 35.0% | |
| TAAAGAGAATTCTCCGTCTT+CGG | - | chr4.2:21669870-21669889 | MS.gene39408:CDS | 35.0% | |
| TAGTGCAGACTTATATTGAC+GGG | + | chr4.2:21669641-21669660 | None:intergenic | 35.0% | |
| TATGATAATATGGCACTGCT+AGG | - | chr4.2:21667594-21667613 | MS.gene39408:intron | 35.0% | |
| TCAAAGACTCAGTCTCATAA+GGG | + | chr4.2:21666458-21666477 | None:intergenic | 35.0% | |
| TCATTGAGACATAAACCACA+TGG | + | chr4.2:21667139-21667158 | None:intergenic | 35.0% | |
| TGCAAATGGCAATAAACTAG+TGG | + | chr4.2:21668911-21668930 | None:intergenic | 35.0% | |
| TGTGAAAGAACATGTGATTC+TGG | + | chr4.2:21668310-21668329 | None:intergenic | 35.0% | |
| TGTGAAGGAACATCTAATTC+TGG | + | chr4.2:21668037-21668056 | None:intergenic | 35.0% | |
| TTACACATCAAGAAAGCTGT+CGG | - | chr4.2:21669901-21669920 | MS.gene39408:CDS | 35.0% | |
| TTCAACTAAAGAGACGTCAA+AGG | - | chr4.2:21668351-21668370 | MS.gene39408:intron | 35.0% | |
| TTCATGAGACCAGTTTGTAT+CGG | + | chr4.2:21668137-21668156 | None:intergenic | 35.0% | |
| TTGACAGAGACTGTATATGA+AGG | - | chr4.2:21668523-21668542 | MS.gene39408:intron | 35.0% | |
| TTTGAGAGTGATACATGAAG+AGG | - | chr4.2:21666473-21666492 | MS.gene39408:CDS | 35.0% | |
| ! | AACGTGTTTTGCGTATACAA+TGG | - | chr4.2:21665564-21665583 | MS.gene39408:intron | 35.0% |
| ! | ATAAGTTGACAGATACAGCT+GGG | - | chr4.2:21668245-21668264 | MS.gene39408:intron | 35.0% |
| ! | ATCCACTGTTGGATTTTCAT+CGG | - | chr4.2:21667892-21667911 | MS.gene39408:intron | 35.0% |
| ! | ATTCTTGAGACCAGTTTTTC+TGG | + | chr4.2:21668411-21668430 | None:intergenic | 35.0% |
| ! | GGCGATTTTAGATTCTGTTT+TGG | - | chr4.2:21668759-21668778 | MS.gene39408:intron | 35.0% |
| ! | TGCTACTTACATTGATGAGA+TGG | - | chr4.2:21667182-21667201 | MS.gene39408:intron | 35.0% |
| ! | TTCTTGAGACCAGTTTTTCT+GGG | + | chr4.2:21668410-21668429 | None:intergenic | 35.0% |
| !! | TCTATTTTAAGCACATGGCT+TGG | - | chr4.2:21665731-21665750 | MS.gene39408:intron | 35.0% |
| !!! | GGGTGTTTTAAAAAAAGGAG+AGG | - | chr4.2:21668553-21668572 | MS.gene39408:intron | 35.0% |
| !!! | TCAAGGTTTTGAGGTTCAAT+CGG | + | chr4.2:21666813-21666832 | None:intergenic | 35.0% |
| !!! | TGTTGGATTTTCATCGGTTT+GGG | - | chr4.2:21667898-21667917 | MS.gene39408:intron | 35.0% |
| !!! | TTATTTTGATGGTGGGATGA+TGG | - | chr4.2:21667030-21667049 | MS.gene39408:CDS | 35.0% |
| AAAAGAGGAACTTGGGAAAG+AGG | - | chr4.2:21666352-21666371 | MS.gene39408:CDS | 40.0% | |
| AAAGGAGAGGAAAGAGAAAG+AGG | - | chr4.2:21668566-21668585 | MS.gene39408:intron | 40.0% | |
| AACCGATGAAAATCCAACAG+TGG | + | chr4.2:21667897-21667916 | None:intergenic | 40.0% | |
| AAGAAAAACTGACGGAGAAC+AGG | - | chr4.2:21669680-21669699 | MS.gene39408:intron | 40.0% | |
| AAGTGGCGAACCAAAACAAT+TGG | + | chr4.2:21665613-21665632 | None:intergenic | 40.0% | |
| ACAATCACAAACCACATCAG+TGG | + | chr4.2:21667084-21667103 | None:intergenic | 40.0% | |
| ACATTAAACCGGTGTAGGTA+TGG | + | chr4.2:21666838-21666857 | None:intergenic | 40.0% | |
| ACTAAAGAGACGTCAAAGGA+TGG | - | chr4.2:21668355-21668374 | MS.gene39408:intron | 40.0% | |
| ACTGTATATGAAGGACATGG+AGG | - | chr4.2:21668532-21668551 | MS.gene39408:intron | 40.0% | |
| AGAGTGATACATGAAGAGGT+AGG | - | chr4.2:21666477-21666496 | MS.gene39408:CDS | 40.0% | |
| ATCAAAGCTTGAATCCCTCA+AGG | - | chr4.2:21667958-21667977 | MS.gene39408:intron | 40.0% | |
| ATCAACTAAAGGGAGTGAAC+AGG | + | chr4.2:21668844-21668863 | None:intergenic | 40.0% | |
| ATGTCTTCAGAAGACATTGC+TGG | + | chr4.2:21668169-21668188 | None:intergenic | 40.0% | |
| CAAATCTTCTGGTGTAACTG+AGG | - | chr4.2:21668696-21668715 | MS.gene39408:intron | 40.0% | |
| CAAGAGCAAAGGACCAAAAT+GGG | + | chr4.2:21665081-21665100 | None:intergenic | 40.0% | |
| CACATCAAACCCAGAAAAAC+TGG | - | chr4.2:21668398-21668417 | MS.gene39408:intron | 40.0% | |
| CACATCAAACCGATACAAAC+TGG | - | chr4.2:21668125-21668144 | MS.gene39408:intron | 40.0% | |
| CATTAAACCGGTGTAGGTAT+GGG | + | chr4.2:21666837-21666856 | None:intergenic | 40.0% | |
| CTAAAGAGACGTCAAAGGAT+GGG | - | chr4.2:21668356-21668375 | MS.gene39408:intron | 40.0% | |
| CTCAAAGACTCAGTCTCATA+AGG | + | chr4.2:21666459-21666478 | None:intergenic | 40.0% | |
| CTGTATATGAAGGACATGGA+GGG | - | chr4.2:21668533-21668552 | MS.gene39408:intron | 40.0% | |
| CTTGTTGACAACAACTCAGT+TGG | - | chr4.2:21668010-21668029 | MS.gene39408:intron | 40.0% | |
| GACAGCTTTCTTGATGTGTA+AGG | + | chr4.2:21669902-21669921 | None:intergenic | 40.0% | |
| GAGACTGTATATGAAGGACA+TGG | - | chr4.2:21668529-21668548 | MS.gene39408:intron | 40.0% | |
| GAGCCAGACAAAAAAGTTTG+GGG | + | chr4.2:21667059-21667078 | None:intergenic | 40.0% | |
| GGAGAACACGAACTTGAAAA+AGG | - | chr4.2:21668717-21668736 | MS.gene39408:intron | 40.0% | |
| GGAGCCAGACAAAAAAGTTT+GGG | + | chr4.2:21667060-21667079 | None:intergenic | 40.0% | |
| GGATGGAACAAAAGATCTGA+TGG | - | chr4.2:21668738-21668757 | MS.gene39408:intron | 40.0% | |
| TATGCCAAAGCCTTCTTGTT+AGG | - | chr4.2:21667265-21667284 | MS.gene39408:intron | 40.0% | |
| TATTACCTCGGGTGTAATAG+CGG | + | chr4.2:21664843-21664862 | None:intergenic | 40.0% | |
| TCAGAGTCTCTATAACCATG+TGG | - | chr4.2:21667121-21667140 | MS.gene39408:intron | 40.0% | |
| TCTTTACTACCACCAGTACT+AGG | + | chr4.2:21669856-21669875 | None:intergenic | 40.0% | |
| TGCAACTCCGAATCTTATGA+AGG | - | chr4.2:21669945-21669964 | MS.gene39408:CDS | 40.0% | |
| TGGTAGAACTTTCTTTCAGC+CGG | + | chr4.2:21668657-21668676 | None:intergenic | 40.0% | |
| TGTAAGGATTTCACCGAAGA+CGG | + | chr4.2:21669886-21669905 | None:intergenic | 40.0% | |
| TGTATAACCATGTGGTTCAG+TGG | - | chr4.2:21666144-21666163 | MS.gene39408:CDS | 40.0% | |
| TGTGTTTGAGGAATGAATGG+AGG | - | chr4.2:21666410-21666429 | MS.gene39408:CDS | 40.0% | |
| TTCATAAGATTCGGAGTTGC+AGG | + | chr4.2:21669946-21669965 | None:intergenic | 40.0% | |
| TTTGAGGAATGAATGGAGGA+AGG | - | chr4.2:21666414-21666433 | MS.gene39408:CDS | 40.0% | |
| ! | AGAACACGAGCATGTGTTTT+AGG | + | chr4.2:21665761-21665780 | None:intergenic | 40.0% |
| ! | AGCAATGTCTTCTGAAGACA+TGG | - | chr4.2:21668168-21668187 | MS.gene39408:intron | 40.0% |
| ! | CAGGATCTTTTACACATACC+TGG | + | chr4.2:21668825-21668844 | None:intergenic | 40.0% |
| ! | CTGATGTGGTTTGTGATTGT+TGG | - | chr4.2:21667084-21667103 | MS.gene39408:intron | 40.0% |
| ! | CTTATATTGACGGGTGTTCT+TGG | + | chr4.2:21669632-21669651 | None:intergenic | 40.0% |
| ! | GATAAGTTGACAGATACAGC+TGG | - | chr4.2:21668244-21668263 | MS.gene39408:intron | 40.0% |
| ! | GTAGAGATTTGCTCAAGGAA+TGG | - | chr4.2:21669420-21669439 | MS.gene39408:intron | 40.0% |
| ! | GTTGTTGTTCCTTTCAGATC+TGG | + | chr4.2:21666247-21666266 | None:intergenic | 40.0% |
| ! | TAATCTTCTGGTTACAAGGG+CGG | + | chr4.2:21669771-21669790 | None:intergenic | 40.0% |
| ! | TCCTTTCAGATCTGGAATTC+CGG | + | chr4.2:21666239-21666258 | None:intergenic | 40.0% |
| ! | TTTGATAGCAGAAGCGACAA+AGG | - | chr4.2:21669473-21669492 | MS.gene39408:intron | 40.0% |
| !! | ACCTACACCGGTTTAATGTT+CGG | - | chr4.2:21666839-21666858 | MS.gene39408:intron | 40.0% |
| !! | CTGTTGGATTTTCATCGGTT+TGG | - | chr4.2:21667897-21667916 | MS.gene39408:intron | 40.0% |
| !!! | AAGGTTTTGAGGTTCAATCG+GGG | + | chr4.2:21666811-21666830 | None:intergenic | 40.0% |
| !!! | CAAGGTTTTGAGGTTCAATC+GGG | + | chr4.2:21666812-21666831 | None:intergenic | 40.0% |
| !!! | TTATTTTTAGGATGGGGTGG+CGG | + | chr4.2:21666199-21666218 | None:intergenic | 40.0% |
| AAAAACTGACGGAGAACAGG+AGG | - | chr4.2:21669683-21669702 | MS.gene39408:intron | 45.0% | |
| AAAGCCAAGAAGCCTAGTAC+TGG | - | chr4.2:21669841-21669860 | MS.gene39408:intron | 45.0% | |
| AACCGGACCGAACATTAAAC+CGG | + | chr4.2:21666849-21666868 | None:intergenic | 45.0% | |
| AAGTGTCATGCTGTCTTTCG+AGG | + | chr4.2:21667510-21667529 | None:intergenic | 45.0% | |
| AATGTTGCAAAGGTAGCCGA+TGG | - | chr4.2:21669790-21669809 | MS.gene39408:intron | 45.0% | |
| ACCGAACATTAAACCGGTGT+AGG | + | chr4.2:21666843-21666862 | None:intergenic | 45.0% | |
| ACCGGAATTCCAGATCTGAA+AGG | - | chr4.2:21666235-21666254 | MS.gene39408:CDS | 45.0% | |
| ACGCTTGGGACTTTCAAAGA+AGG | + | chr4.2:21669748-21669767 | None:intergenic | 45.0% | |
| AGATTACGCCTGGTGTTTCA+GGG | - | chr4.2:21668464-21668483 | MS.gene39408:intron | 45.0% | |
| AGTGTCATGCTGTCTTTCGA+GGG | + | chr4.2:21667509-21667528 | None:intergenic | 45.0% | |
| ATAACCATGTGGTTCAGTGG+CGG | - | chr4.2:21666147-21666166 | MS.gene39408:CDS | 45.0% | |
| ATCACAAACCACATCAGTGG+CGG | + | chr4.2:21667081-21667100 | None:intergenic | 45.0% | |
| CAGAAGACATTGCTGGAACT+TGG | + | chr4.2:21668435-21668454 | None:intergenic | 45.0% | |
| CCAAGAGCAAAGGACCAAAA+TGG | + | chr4.2:21665082-21665101 | None:intergenic | 45.0% | |
| CCAGACAAAAAAGTTTGGGG+TGG | + | chr4.2:21667056-21667075 | None:intergenic | 45.0% | |
| CGGAGCCAGACAAAAAAGTT+TGG | + | chr4.2:21667061-21667080 | None:intergenic | 45.0% | |
| CTAAATTGGGCCAAGAGCAA+AGG | + | chr4.2:21665092-21665111 | None:intergenic | 45.0% | |
| CTCATTCTTGTCAGCCTTGA+GGG | + | chr4.2:21667975-21667994 | None:intergenic | 45.0% | |
| CTTTAGACCCACATTCTGAC+TGG | - | chr4.2:21665401-21665420 | MS.gene39408:intron | 45.0% | |
| GAAAGTTCTACCAGCAACTG+TGG | - | chr4.2:21668664-21668683 | MS.gene39408:intron | 45.0% | |
| GAATTGCAACAGCGCTATTC+AGG | - | chr4.2:21667389-21667408 | MS.gene39408:intron | 45.0% | |
| GAGAGGAAAGAGAAAGAGGA+AGG | - | chr4.2:21668570-21668589 | MS.gene39408:intron | 45.0% | |
| GCAGTTAATCCAGAGACACA+TGG | - | chr4.2:21669501-21669520 | MS.gene39408:intron | 45.0% | |
| GGAGTAGAACAGCAAAGCAT+TGG | + | chr4.2:21669611-21669630 | None:intergenic | 45.0% | |
| GGTAGAACTTTCTTTCAGCC+GGG | + | chr4.2:21668656-21668675 | None:intergenic | 45.0% | |
| GGTGAGGTTGTCAAATCTTC+TGG | - | chr4.2:21668685-21668704 | MS.gene39408:intron | 45.0% | |
| GTGATACATGAAGAGGTAGG+CGG | - | chr4.2:21666480-21666499 | MS.gene39408:CDS | 45.0% | |
| TATGCATATGGTCGTTGAGG+TGG | - | chr4.2:21665662-21665681 | MS.gene39408:intron | 45.0% | |
| TCAATAGACCCTGAAACACC+AGG | + | chr4.2:21668202-21668221 | None:intergenic | 45.0% | |
| TCTCATTCTTGTCAGCCTTG+AGG | + | chr4.2:21667976-21667995 | None:intergenic | 45.0% | |
| TGTCAAAGTCCATGTGTCTC+TGG | + | chr4.2:21669513-21669532 | None:intergenic | 45.0% | |
| TTCGGTTCCAGTCAGAATGT+GGG | + | chr4.2:21665411-21665430 | None:intergenic | 45.0% | |
| TTCTTGGTGGAGCTGTTATC+CGG | - | chr4.2:21664756-21664775 | MS.gene39408:CDS | 45.0% | |
| ! | AAACTGGTCTCATGAATGCC+AGG | - | chr4.2:21668141-21668160 | MS.gene39408:intron | 45.0% |
| ! | GGTATGGGTTCAAGGTTTTG+AGG | + | chr4.2:21666822-21666841 | None:intergenic | 45.0% |
| !! | CCATTTTGGTCCTTTGCTCT+TGG | - | chr4.2:21665079-21665098 | MS.gene39408:CDS | 45.0% |
| !! | GTAGAACAGCAAAGCATTGG+TGG | + | chr4.2:21669608-21669627 | None:intergenic | 45.0% |
| !! | TCAAAGGATGGGTTATCTGC+TGG | - | chr4.2:21668367-21668386 | MS.gene39408:intron | 45.0% |
| !! | TCACGTGGTGCCAATTGTTT+TGG | - | chr4.2:21665600-21665619 | MS.gene39408:intron | 45.0% |
| !!! | CCACCCCAAACTTTTTTGTC+TGG | - | chr4.2:21667053-21667072 | MS.gene39408:CDS | 45.0% |
| !!! | CGGTCCGGTTTTGATTACTT+TGG | - | chr4.2:21666859-21666878 | MS.gene39408:intron | 45.0% |
| !!! | TTTTGAGGTTCAATCGGGGT+TGG | + | chr4.2:21666807-21666826 | None:intergenic | 45.0% |
| !! | AAATAAAAAAATTTATATAC+CGG | - | chr4.2:21666217-21666236 | MS.gene39408:CDS | 5.0% |
| !! | ATAATAAATAAATAAAATAG+TGG | + | chr4.2:21664889-21664908 | None:intergenic | 5.0% |
| !!! | AAAAAAATACATTTTTTATT+AGG | - | chr4.2:21666724-21666743 | MS.gene39408:CDS | 5.0% |
| AAGGAGAAGGAGTTCTCCCT+CGG | + | chr4.2:21664820-21664839 | None:intergenic | 50.0% | |
| AATATGGCACTGCTAGGGCT+TGG | - | chr4.2:21667600-21667619 | MS.gene39408:intron | 50.0% | |
| ACATGGGAGGAGCTTCTTCT+TGG | - | chr4.2:21664740-21664759 | MS.gene39408:CDS | 50.0% | |
| ACCACCAGTACTAGGCTTCT+TGG | + | chr4.2:21669848-21669867 | None:intergenic | 50.0% | |
| AGATCTCGCCTGGTGTTTCA+GGG | - | chr4.2:21668191-21668210 | MS.gene39408:intron | 50.0% | |
| AGCAGAGCTTAAGCGAGCTT+TGG | - | chr4.2:21667649-21667668 | MS.gene39408:intron | 50.0% | |
| AGCGGAAGTGATTGTGACGT+GGG | - | chr4.2:21664715-21664734 | MS.gene39408:CDS | 50.0% | |
| CACATCAAGAAAGCTGTCGG+TGG | - | chr4.2:21669904-21669923 | MS.gene39408:CDS | 50.0% | |
| CAGAAGACATTGCTGGAACC+TGG | + | chr4.2:21668162-21668181 | None:intergenic | 50.0% | |
| CCTTGAACCCATACCTACAC+CGG | - | chr4.2:21666827-21666846 | MS.gene39408:intron | 50.0% | |
| CTTCGGTTCCAGTCAGAATG+TGG | + | chr4.2:21665412-21665431 | None:intergenic | 50.0% | |
| CTTGGGAAAGAGGACGAGAA+AGG | - | chr4.2:21666362-21666381 | MS.gene39408:CDS | 50.0% | |
| GAAGACATGGAGATTACGCC+TGG | - | chr4.2:21668454-21668473 | MS.gene39408:intron | 50.0% | |
| GAGATTACGCCTGGTGTTTC+AGG | - | chr4.2:21668463-21668482 | MS.gene39408:intron | 50.0% | |
| GGTTATGGGTAGCATTCACG+TGG | - | chr4.2:21665585-21665604 | MS.gene39408:intron | 50.0% | |
| TTCTACCAGCAACTGTGGTG+AGG | - | chr4.2:21668669-21668688 | MS.gene39408:intron | 50.0% | |
| ! | GGCGAGTAGAGATTTGCTCA+AGG | - | chr4.2:21669415-21669434 | MS.gene39408:intron | 50.0% |
| ! | GGTGTAATAGCGGAAGGAGA+AGG | + | chr4.2:21664833-21664852 | None:intergenic | 50.0% |
| !! | CAAAGGATGGGCTATCTGCT+GGG | - | chr4.2:21668095-21668114 | MS.gene39408:intron | 50.0% |
| !! | CACCGGTTTAATGTTCGGTC+CGG | - | chr4.2:21666844-21666863 | MS.gene39408:intron | 50.0% |
| !! | TCAAAGGATGGGCTATCTGC+TGG | - | chr4.2:21668094-21668113 | MS.gene39408:intron | 50.0% |
| AGGTTCAATCGGGGTTGGAC+CGG | + | chr4.2:21666802-21666821 | None:intergenic | 55.0% | |
| AGTTCCGCCACTGAACCACA+TGG | + | chr4.2:21666154-21666173 | None:intergenic | 55.0% | |
| CCGGTGTAGGTATGGGTTCA+AGG | + | chr4.2:21666830-21666849 | None:intergenic | 55.0% | |
| CGGAAGTGATTGTGACGTGG+GGG | - | chr4.2:21664717-21664736 | MS.gene39408:CDS | 55.0% | |
| CTGTCGCAAGCATGATAGCC+AGG | - | chr4.2:21668804-21668823 | MS.gene39408:intron | 55.0% | |
| GAAGACATGGAGATCTCGCC+TGG | - | chr4.2:21668181-21668200 | MS.gene39408:intron | 55.0% | |
| GACAACCTCACCACAGTTGC+TGG | + | chr4.2:21668677-21668696 | None:intergenic | 55.0% | |
| GAGATCTCGCCTGGTGTTTC+AGG | - | chr4.2:21668190-21668209 | MS.gene39408:intron | 55.0% | |
| GAGCGGAAGTGATTGTGACG+TGG | - | chr4.2:21664714-21664733 | MS.gene39408:CDS | 55.0% | |
| GATTGTGACGTGGGGGACAT+GGG | - | chr4.2:21664724-21664743 | MS.gene39408:CDS | 55.0% | |
| GCGGAAGTGATTGTGACGTG+GGG | - | chr4.2:21664716-21664735 | MS.gene39408:CDS | 55.0% | |
| TCCTTCCGCTATTACACCCG+AGG | - | chr4.2:21664835-21664854 | MS.gene39408:CDS | 55.0% | |
| TCGGTTGACCCTGAAACACC+AGG | + | chr4.2:21668475-21668494 | None:intergenic | 55.0% | |
| TGATTGTGACGTGGGGGACA+TGG | - | chr4.2:21664723-21664742 | MS.gene39408:CDS | 55.0% | |
| TGGGAGGAGCTTCTTCTTGG+TGG | - | chr4.2:21664743-21664762 | MS.gene39408:CDS | 55.0% | |
| ! | ACCTCGGGTGTAATAGCGGA+AGG | + | chr4.2:21664839-21664858 | None:intergenic | 55.0% |
| ! | ATGTGGTTCAGTGGCGGAAC+TGG | - | chr4.2:21666153-21666172 | MS.gene39408:CDS | 55.0% |
| ! | CACTGCTAGGGCTTGGTATG+AGG | - | chr4.2:21667607-21667626 | MS.gene39408:intron | 55.0% |
| ! | GCCAAGAAGCCTAGTACTGG+TGG | - | chr4.2:21669844-21669863 | MS.gene39408:intron | 55.0% |
| ! | TGTGGTTCAGTGGCGGAACT+GGG | - | chr4.2:21666154-21666173 | MS.gene39408:CDS | 55.0% |
| ! | TTATTTGAGACCCCCGAGGC+AGG | + | chr4.2:21669823-21669842 | None:intergenic | 55.0% |
| !! | GGCTTTATTTGAGACCCCCG+AGG | + | chr4.2:21669827-21669846 | None:intergenic | 55.0% |
| !!! | TTTTTAGGATGGGGTGGCGG+TGG | + | chr4.2:21666196-21666215 | None:intergenic | 55.0% |
| ACCAATCACCAGTGCCGTGC+CGG | + | chr4.2:21664778-21664797 | None:intergenic | 60.0% | |
| GGTGGAGCTGTTATCCGGCA+CGG | - | chr4.2:21664761-21664780 | MS.gene39408:CDS | 60.0% | |
| GGTTACAAGGGCGGACGCTT+GGG | + | chr4.2:21669762-21669781 | None:intergenic | 60.0% | |
| GGTTCAATCGGGGTTGGACC+GGG | + | chr4.2:21666801-21666820 | None:intergenic | 60.0% | |
| GTTCAATCGGGGTTGGACCG+GGG | + | chr4.2:21666800-21666819 | None:intergenic | 60.0% | |
| TGGTTACAAGGGCGGACGCT+TGG | + | chr4.2:21669763-21669782 | None:intergenic | 60.0% | |
| ! | GTGGTTCAGTGGCGGAACTG+GGG | - | chr4.2:21666155-21666174 | MS.gene39408:CDS | 60.0% |
| ! | TGGTGATTGGTCCGTCGTCG+CGG | - | chr4.2:21664787-21664806 | MS.gene39408:CDS | 60.0% |
| ! | TGGTTCAGTGGCGGAACTGG+GGG | - | chr4.2:21666156-21666175 | MS.gene39408:CDS | 60.0% |
| ATGGCAGCGATCCTGCCTCG+GGG | - | chr4.2:21669809-21669828 | MS.gene39408:intron | 65.0% | |
| CGAGGCAGGATCGCTGCCAT+CGG | + | chr4.2:21669809-21669828 | None:intergenic | 65.0% | |
| CGATGGCAGCGATCCTGCCT+CGG | - | chr4.2:21669807-21669826 | MS.gene39408:intron | 65.0% | |
| GATGGCAGCGATCCTGCCTC+GGG | - | chr4.2:21669808-21669827 | MS.gene39408:intron | 65.0% | |
| GCTGTTATCCGGCACGGCAC+TGG | - | chr4.2:21664767-21664786 | MS.gene39408:CDS | 65.0% | |
| TGTGACGTGGGGGACATGGG+AGG | - | chr4.2:21664727-21664746 | MS.gene39408:CDS | 65.0% | |
| ! | GGTTCAGTGGCGGAACTGGG+GGG | - | chr4.2:21666157-21666176 | MS.gene39408:CDS | 65.0% |
| ! | GTCTGGCTCCGCCACTGATG+TGG | - | chr4.2:21667070-21667089 | MS.gene39408:CDS | 65.0% |
| ! | TGATTGGTCCGTCGTCGCGG+CGG | - | chr4.2:21664790-21664809 | MS.gene39408:CDS | 65.0% |
| !! | TCCGGCACGGCACTGGTGAT+TGG | - | chr4.2:21664774-21664793 | MS.gene39408:CDS | 65.0% |
| CGGAACTGGGGGGTGGCAAG+GGG | - | chr4.2:21666167-21666186 | MS.gene39408:CDS | 70.0% | |
| GCGGAACTGGGGGGTGGCAA+GGG | - | chr4.2:21666166-21666185 | MS.gene39408:CDS | 70.0% | |
| GGAACTGGGGGGTGGCAAGG+GGG | - | chr4.2:21666168-21666187 | MS.gene39408:CDS | 70.0% | |
| TGGCAGCGATCCTGCCTCGG+GGG | - | chr4.2:21669810-21669829 | MS.gene39408:intron | 70.0% | |
| ! | TCAGTGGCGGAACTGGGGGG+TGG | - | chr4.2:21666160-21666179 | MS.gene39408:CDS | 70.0% |
| GGCGGAACTGGGGGGTGGCA+AGG | - | chr4.2:21666165-21666184 | MS.gene39408:CDS | 75.0% | |
| TCGGAGCTCCGCCGCGACGA+CGG | + | chr4.2:21664801-21664820 | None:intergenic | 75.0% | |
| TCGTCGCGGCGGAGCTCCGA+GGG | - | chr4.2:21664801-21664820 | MS.gene39408:CDS | 75.0% | |
| ! | GTCGTCGCGGCGGAGCTCCG+AGG | - | chr4.2:21664800-21664819 | MS.gene39408:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 21664710 | 21670005 | 21664710 | ID=MS.gene39408 |
| chr4.2 | mRNA | 21664710 | 21670005 | 21664710 | ID=MS.gene39408.t1;Parent=MS.gene39408 |
| chr4.2 | exon | 21669859 | 21670005 | 21669859 | ID=MS.gene39408.t1.exon1;Parent=MS.gene39408.t1 |
| chr4.2 | CDS | 21669859 | 21670005 | 21669859 | ID=cds.MS.gene39408.t1;Parent=MS.gene39408.t1 |
| chr4.2 | exon | 21667298 | 21667347 | 21667298 | ID=MS.gene39408.t1.exon2;Parent=MS.gene39408.t1 |
| chr4.2 | CDS | 21667298 | 21667347 | 21667298 | ID=cds.MS.gene39408.t1;Parent=MS.gene39408.t1 |
| chr4.2 | exon | 21667022 | 21667099 | 21667022 | ID=MS.gene39408.t1.exon3;Parent=MS.gene39408.t1 |
| chr4.2 | CDS | 21667022 | 21667099 | 21667022 | ID=cds.MS.gene39408.t1;Parent=MS.gene39408.t1 |
| chr4.2 | exon | 21665890 | 21666766 | 21665890 | ID=MS.gene39408.t1.exon4;Parent=MS.gene39408.t1 |
| chr4.2 | CDS | 21665890 | 21666766 | 21665890 | ID=cds.MS.gene39408.t1;Parent=MS.gene39408.t1 |
| chr4.2 | exon | 21664710 | 21665231 | 21664710 | ID=MS.gene39408.t1.exon5;Parent=MS.gene39408.t1 |
| chr4.2 | CDS | 21664710 | 21665231 | 21664710 | ID=cds.MS.gene39408.t1;Parent=MS.gene39408.t1 |
| Gene Sequence |
| Protein sequence |
