Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053146.t1 | AET01618.1 | 66 | 106 | 15 | 2 | 101 | 203 | 87 | 174 | 1.10E-23 | 120.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053146.t1 | G7LI68 | 66.0 | 106 | 15 | 2 | 101 | 203 | 87 | 174 | 7.9e-24 | 120.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene053146 | 0.818992 | 1.47E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene053146 | 0.815148 | 1.07E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene053146 | 0.811416 | 7.08E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene053146 | 0.830378 | 3.04E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene054582 | 0.992377 | 6.36E-193 | -1.69E-46 |
| MS.gene053146 | MS.gene055818 | 0.828094 | 1.09E-54 | -1.69E-46 |
| MS.gene053146 | MS.gene057855 | 0.81751 | 3.18E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene060322 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene053146 | MS.gene061980 | 0.810743 | 9.90E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene067898 | 0.81021 | 1.29E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene070210 | 0.810767 | 9.79E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene074606 | 0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene053146 | MS.gene08813 | 0.829509 | 4.95E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene08853 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene09277 | 0.827606 | 1.43E-54 | -1.69E-46 |
| MS.gene053146 | MS.gene21562 | 0.818925 | 1.52E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene24623 | 0.822731 | 2.02E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene24626 | 0.815069 | 1.12E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene24628 | 0.812444 | 4.23E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene31022 | 0.816953 | 4.24E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene32893 | 0.815473 | 9.08E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene33468 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene35611 | 0.82891 | 6.91E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene39408 | 0.816775 | 4.65E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene39882 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene40799 | 0.811221 | 7.80E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene44058 | 0.801628 | 8.23E-49 | -1.69E-46 |
| MS.gene053146 | MS.gene44179 | 0.809285 | 2.04E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene44510 | 0.827608 | 1.42E-54 | -1.69E-46 |
| MS.gene053146 | MS.gene45641 | 0.814233 | 1.71E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene49320 | 0.80783 | 4.17E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene50031 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene053146 | MS.gene51511 | 0.811259 | 7.66E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene51788 | 0.818521 | 1.88E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene52357 | 0.822041 | 2.93E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene61331 | 0.812841 | 3.46E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene63793 | 0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene053146 | MS.gene66990 | 0.808612 | 2.84E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene67746 | 0.830369 | 3.05E-55 | -1.69E-46 |
| MS.gene053146 | MS.gene69891 | 0.800571 | 1.35E-48 | -1.69E-46 |
| MS.gene053146 | MS.gene71853 | 0.801212 | 1.00E-48 | -1.69E-46 |
| MS.gene053146 | MS.gene73498 | 0.812389 | 4.35E-51 | -1.69E-46 |
| MS.gene053146 | MS.gene73564 | 0.810438 | 1.15E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene73883 | 0.809831 | 1.56E-50 | -1.69E-46 |
| MS.gene053146 | MS.gene73885 | 0.802371 | 5.79E-49 | -1.69E-46 |
| MS.gene053146 | MS.gene77015 | 0.800814 | 1.21E-48 | -1.69E-46 |
| MS.gene053146 | MS.gene79508 | 0.837777 | 4.25E-57 | -1.69E-46 |
| MS.gene053146 | MS.gene87407 | 0.821676 | 3.56E-53 | -1.69E-46 |
| MS.gene053146 | MS.gene93311 | 0.816461 | 5.47E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053146.t1 | MTR_8g018100 | 70.000 | 130 | 18 | 2 | 101 | 227 | 87 | 198 | 3.09e-50 | 165 |
| MS.gene053146.t1 | MTR_8g018100 | 44.000 | 125 | 49 | 6 | 18 | 139 | 131 | 237 | 7.32e-13 | 66.6 |
| MS.gene053146.t1 | MTR_1g115220 | 80.882 | 68 | 10 | 1 | 157 | 221 | 21 | 88 | 1.04e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATGATTACCTTTGATTT+TGG | 0.169382 | 4.2:+91660604 | None:intergenic |
| AGATCTTCGCGAAGCTAAAT+TGG | 0.247966 | 4.2:-91661512 | MS.gene053146:CDS |
| CTAGTTGAATCAAAGCTTCT+TGG | 0.282657 | 4.2:+91660992 | None:intergenic |
| TCGCTTTCTAAATTTATATT+CGG | 0.331894 | 4.2:-91661605 | MS.gene053146:CDS |
| CCGAAGGATCATCCATTATA+CGG | 0.375242 | 4.2:-91661631 | MS.gene053146:CDS |
| TGCGTGTCAACGGGTGCAAC+AGG | 0.392472 | 4.2:+91660644 | None:intergenic |
| AGGAGAAGAACGAACCATTT+GGG | 0.393055 | 4.2:+91660940 | None:intergenic |
| AATCAAAGCTTCTTGGGTAA+TGG | 0.393707 | 4.2:+91660999 | None:intergenic |
| TCTTCCACCTCTCCTGGTGC+AGG | 0.394878 | 4.2:+91660141 | None:intergenic |
| AGAAAGCGACAACCGTATAA+TGG | 0.406074 | 4.2:+91661619 | None:intergenic |
| GGGATATGATAAGGAAGATA+AGG | 0.437427 | 4.2:-91660190 | MS.gene053146:CDS |
| CTACAATTGTGCGTGTCAAC+GGG | 0.442078 | 4.2:+91660635 | None:intergenic |
| ATGGCAGTGCTTTCCCCAAA+TGG | 0.446026 | 4.2:-91660954 | MS.gene053146:intron |
| CTTCCACCTCTCCTGGTGCA+GGG | 0.450689 | 4.2:+91660142 | None:intergenic |
| GTTAACTCTTCCACCTCTCC+TGG | 0.451248 | 4.2:+91660135 | None:intergenic |
| AGACTAAAATTTCACCTCTC+AGG | 0.451846 | 4.2:+91661433 | None:intergenic |
| CCTTGCCGCCACCATGGACT+TGG | 0.453782 | 4.2:-91661659 | None:intergenic |
| CCGTATAATGGATGATCCTT+CGG | 0.457729 | 4.2:+91661631 | None:intergenic |
| AAAAGAACCAACTGCGAAAA+GGG | 0.458718 | 4.2:-91660328 | MS.gene053146:CDS |
| TAGTTGAATCAAAGCTTCTT+GGG | 0.458718 | 4.2:+91660993 | None:intergenic |
| AAAAGAACCAACTGCGAAAA+GGG | 0.458718 | 4.2:-91661324 | MS.gene053146:CDS |
| ATATTCGGACGAGGCACTCT+TGG | 0.459564 | 4.2:-91661590 | MS.gene053146:CDS |
| TCACAAATCTTCTTTGCTGC+AGG | 0.460278 | 4.2:+91661078 | None:intergenic |
| GGATCAGGAGGGATATGATA+AGG | 0.465606 | 4.2:-91660199 | MS.gene053146:CDS |
| CAAAAGAACCAACTGCGAAA+AGG | 0.465631 | 4.2:-91660329 | MS.gene053146:CDS |
| CAAAAGAACCAACTGCGAAA+AGG | 0.465631 | 4.2:-91661325 | MS.gene053146:CDS |
| GGAAGGCCAATCTGATGATA+AGG | 0.467371 | 4.2:-91660169 | MS.gene053146:CDS |
| GCTACAATTGTGCGTGTCAA+CGG | 0.476888 | 4.2:+91660634 | None:intergenic |
| AGCCCCTGCACCAGGAGAGG+TGG | 0.481468 | 4.2:-91660145 | MS.gene053146:CDS |
| GGGCTTCCTTATCATCAGAT+TGG | 0.481597 | 4.2:+91660163 | None:intergenic |
| TTCCACCTCTCCTGGTGCAG+GGG | 0.483421 | 4.2:+91660143 | None:intergenic |
| GTTATATAAGTACGAAGATA+AGG | 0.511157 | 4.2:-91661566 | MS.gene053146:CDS |
| AGTTAACAGATGAGGAGTAG+TGG | 0.515594 | 4.2:-91660119 | None:intergenic |
| GATAAGGAAGCCCCTGCACC+AGG | 0.518868 | 4.2:-91660153 | MS.gene053146:CDS |
| CTGCGAAAAGGGCTAAAGTT+GGG | 0.522171 | 4.2:-91661313 | MS.gene053146:CDS |
| ACTGCGAAAAGGGCTAAAGT+TGG | 0.541934 | 4.2:-91661314 | MS.gene053146:CDS |
| ACTGCGAAAAGGGCTAAAGT+TGG | 0.558971 | 4.2:-91660318 | MS.gene053146:CDS |
| GGAAGCCCCTGCACCAGGAG+AGG | 0.576902 | 4.2:-91660148 | MS.gene053146:CDS |
| GGTGGAAGAGTTAACAGATG+AGG | 0.581307 | 4.2:-91660127 | MS.gene053146:CDS |
| AAAAGGGCTAAAGTTGGGAA+AGG | 0.581404 | 4.2:-91661308 | MS.gene053146:CDS |
| CTTCGGCAACTCCAAGTCCA+TGG | 0.589099 | 4.2:+91661648 | None:intergenic |
| TATTTATGTTTAGGATCAGG+AGG | 0.589442 | 4.2:-91660211 | MS.gene053146:intron |
| TCTAAATTTATATTCGGACG+AGG | 0.591042 | 4.2:-91661599 | MS.gene053146:CDS |
| AGCCTTGAAGCCAAAATCAA+AGG | 0.601595 | 4.2:-91660614 | MS.gene053146:intron |
| CATGGACTTGGAGTTGCCGA+AGG | 0.601960 | 4.2:-91661647 | MS.gene053146:CDS |
| CTAGAAATAAGTGACAAAGA+TGG | 0.605930 | 4.2:-91660973 | MS.gene053146:CDS |
| ATTTATGTTTAGGATCAGGA+GGG | 0.610871 | 4.2:-91660210 | MS.gene053146:intron |
| AAAGGGCTAAAGTTGGGAAA+GGG | 0.618574 | 4.2:-91661307 | MS.gene053146:CDS |
| TATGATAAGGAAGATAAGGA+AGG | 0.621270 | 4.2:-91660186 | MS.gene053146:CDS |
| GGAGAAGAACGAACCATTTG+GGG | 0.661729 | 4.2:+91660941 | None:intergenic |
| CTGAAGTGAAGAAACCTGAG+AGG | 0.670696 | 4.2:-91661447 | MS.gene053146:intron |
| ATATAAGTACGAAGATAAGG+TGG | 0.691646 | 4.2:-91661563 | MS.gene053146:CDS |
| CTGAAGTGAAGAAACCCGAG+AGG | 0.719762 | 4.2:-91660461 | MS.gene053146:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTGATTTTATTTAATT+TGG | - | chr4.2:91661252-91661271 | MS.gene053146:intron | 10.0% |
| !!! | TTAGGTTTATTTATTTATTT+TGG | - | chr4.2:91660396-91660415 | MS.gene053146:intron | 10.0% |
| !! | AATATTCACAAACTAAAATT+GGG | + | chr4.2:91661345-91661364 | None:intergenic | 15.0% |
| !!! | AAGTATGTTTTCTTTTAATT+TGG | - | chr4.2:91660515-91660534 | MS.gene053146:intron | 15.0% |
| !!! | GTTTTTTTTTGTTAGTATTT+AGG | - | chr4.2:91660378-91660397 | MS.gene053146:intron | 15.0% |
| !!! | TATTTATTTTGGAATTTTGT+AGG | - | chr4.2:91660407-91660426 | MS.gene053146:intron | 15.0% |
| !!! | TTGATAATAATTCCTAATTA+GGG | + | chr4.2:91661203-91661222 | None:intergenic | 15.0% |
| !!! | TTTAGGTTTATCTATTTTTT+TGG | - | chr4.2:91661392-91661411 | MS.gene053146:intron | 15.0% |
| !!! | TTTGATAATAATTCCTAATT+AGG | + | chr4.2:91661204-91661223 | None:intergenic | 15.0% |
| !! | ATATTCACAAACTAAAATTG+GGG | + | chr4.2:91661344-91661363 | None:intergenic | 20.0% |
| !! | CAATATTCACAAACTAAAAT+TGG | + | chr4.2:91661346-91661365 | None:intergenic | 20.0% |
| !! | TCGCTTTCTAAATTTATATT+CGG | - | chr4.2:91660163-91660182 | MS.gene053146:CDS | 20.0% |
| !!! | CAATTTTAGTTTGTGAATAT+TGG | - | chr4.2:91661344-91661363 | MS.gene053146:intron | 20.0% |
| !!! | CTATTTTTTTGGAATTTTGT+AGG | - | chr4.2:91661403-91661422 | MS.gene053146:intron | 20.0% |
| ! | AAAAATTCTCACAAAAGTCT+TGG | - | chr4.2:91660731-91660750 | MS.gene053146:intron | 25.0% |
| ! | ATTACTCATAAACCCTAATT+AGG | - | chr4.2:91661188-91661207 | MS.gene053146:intron | 25.0% |
| ! | GAATCATTTCTTCAAAAACA+TGG | + | chr4.2:91660665-91660684 | None:intergenic | 25.0% |
| ! | GTTATATAAGTACGAAGATA+AGG | - | chr4.2:91660202-91660221 | MS.gene053146:intron | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | + | chr4.2:91660895-91660914 | None:intergenic | 25.0% |
| !! | CTATATTTATGTTTAGGATC+AGG | - | chr4.2:91661554-91661573 | MS.gene053146:CDS | 25.0% |
| !! | TCTTGTTTGTGTTAGTATTT+AGG | - | chr4.2:91661369-91661388 | MS.gene053146:intron | 25.0% |
| !! | TTGTGTTAGTATTTAGGTTT+AGG | - | chr4.2:91661375-91661394 | MS.gene053146:intron | 25.0% |
| !! | TTTTAGTCTGTGAATATTGT+TGG | - | chr4.2:91660349-91660368 | MS.gene053146:intron | 25.0% |
| ATATAAGTACGAAGATAAGG+TGG | - | chr4.2:91660205-91660224 | MS.gene053146:intron | 30.0% | |
| CTAGAAATAAGTGACAAAGA+TGG | - | chr4.2:91660795-91660814 | MS.gene053146:intron | 30.0% | |
| TACCAAACACAATTCATAGA+AGG | + | chr4.2:91660541-91660560 | None:intergenic | 30.0% | |
| TAGTTGAATCAAAGCTTCTT+GGG | + | chr4.2:91660778-91660797 | None:intergenic | 30.0% | |
| TATGATAAGGAAGATAAGGA+AGG | - | chr4.2:91661582-91661601 | MS.gene053146:CDS | 30.0% | |
| TCTAAATTTATATTCGGACG+AGG | - | chr4.2:91660169-91660188 | MS.gene053146:CDS | 30.0% | |
| TTGAGTGTAATTGTAAGTGT+CGG | - | chr4.2:91660927-91660946 | MS.gene053146:intron | 30.0% | |
| ! | AGTTGGAGTATGTTTTCTTT+TGG | - | chr4.2:91661467-91661486 | MS.gene053146:CDS | 30.0% |
| ! | ATTTATGTTTAGGATCAGGA+GGG | - | chr4.2:91661558-91661577 | MS.gene053146:CDS | 30.0% |
| ! | GTTGGAGTATGTTTTCTTTT+GGG | - | chr4.2:91661468-91661487 | MS.gene053146:CDS | 30.0% |
| ! | TATTTATGTTTAGGATCAGG+AGG | - | chr4.2:91661557-91661576 | MS.gene053146:CDS | 30.0% |
| !! | ACGATGATTACCTTTGATTT+TGG | + | chr4.2:91661167-91661186 | None:intergenic | 30.0% |
| !! | CTGGTGCTATATTTATGTTT+AGG | - | chr4.2:91661548-91661567 | MS.gene053146:CDS | 30.0% |
| AAAAGAACCAACTGCGAAAA+GGG | - | chr4.2:91660444-91660463 | MS.gene053146:intron | 35.0% | |
| AATCAAAGCTTCTTGGGTAA+TGG | + | chr4.2:91660772-91660791 | None:intergenic | 35.0% | |
| AGACTAAAATTTCACCTCTC+AGG | + | chr4.2:91660338-91660357 | None:intergenic | 35.0% | |
| CTAGTTGAATCAAAGCTTCT+TGG | + | chr4.2:91660779-91660798 | None:intergenic | 35.0% | |
| GGGATATGATAAGGAAGATA+AGG | - | chr4.2:91661578-91661597 | MS.gene053146:CDS | 35.0% | |
| TGAGTGTAATTGTAAGTGTC+GGG | - | chr4.2:91660928-91660947 | MS.gene053146:intron | 35.0% | |
| TGTTTAAAAATCGAAGCAGC+AGG | - | chr4.2:91660623-91660642 | MS.gene053146:CDS | 35.0% | |
| !! | GCAGTTGGTTCTTTTGAATT+TGG | + | chr4.2:91660439-91660458 | None:intergenic | 35.0% |
| !!! | TACCTTTGATTTTGGCTTCA+AGG | + | chr4.2:91661159-91661178 | None:intergenic | 35.0% |
| AAAAGGGCTAAAGTTGGGAA+AGG | - | chr4.2:91660460-91660479 | MS.gene053146:intron | 40.0% | |
| AAAGGGCTAAAGTTGGGAAA+GGG | - | chr4.2:91660461-91660480 | MS.gene053146:intron | 40.0% | |
| AAGGAGAAGAACGAACCATT+TGG | + | chr4.2:91660832-91660851 | None:intergenic | 40.0% | |
| AGAAAGCGACAACCGTATAA+TGG | + | chr4.2:91660152-91660171 | None:intergenic | 40.0% | |
| AGATCTTCGCGAAGCTAAAT+TGG | - | chr4.2:91660256-91660275 | MS.gene053146:intron | 40.0% | |
| AGCCTTGAAGCCAAAATCAA+AGG | - | chr4.2:91661154-91661173 | MS.gene053146:intron | 40.0% | |
| AGGAGAAGAACGAACCATTT+GGG | + | chr4.2:91660831-91660850 | None:intergenic | 40.0% | |
| CAAAAGAACCAACTGCGAAA+AGG | - | chr4.2:91660443-91660462 | MS.gene053146:intron | 40.0% | |
| CCGAAGGATCATCCATTATA+CGG | - | chr4.2:91660137-91660156 | MS.gene053146:CDS | 40.0% | |
| CTGTGAATATTGTTGGACTC+TGG | - | chr4.2:91660356-91660375 | MS.gene053146:intron | 40.0% | |
| GGCCTTCTATGAATTGTGTT+TGG | - | chr4.2:91660536-91660555 | MS.gene053146:intron | 40.0% | |
| GGGAAAAAATTTCACCTCTC+GGG | + | chr4.2:91661324-91661343 | None:intergenic | 40.0% | |
| GGGGAAAAAATTTCACCTCT+CGG | + | chr4.2:91661325-91661344 | None:intergenic | 40.0% | |
| TATGAAGCATGGACACTTCT+CGG | + | chr4.2:91660964-91660983 | None:intergenic | 40.0% | |
| TCACAAATCTTCTTTGCTGC+AGG | + | chr4.2:91660693-91660712 | None:intergenic | 40.0% | |
| TTAAAAATCGAAGCAGCAGG+AGG | - | chr4.2:91660626-91660645 | MS.gene053146:CDS | 40.0% | |
| ! | GAGTGTAATTGTAAGTGTCG+GGG | - | chr4.2:91660929-91660948 | MS.gene053146:intron | 40.0% |
| !! | CCGTATAATGGATGATCCTT+CGG | + | chr4.2:91660140-91660159 | None:intergenic | 40.0% |
| !!! | TTTGCTCTGTTTTCTGAAGC+TGG | - | chr4.2:91661529-91661548 | MS.gene053146:CDS | 40.0% |
| ACTGCGAAAAGGGCTAAAGT+TGG | - | chr4.2:91660454-91660473 | MS.gene053146:intron | 45.0% | |
| CTACAATTGTGCGTGTCAAC+GGG | + | chr4.2:91661136-91661155 | None:intergenic | 45.0% | |
| CTGAAGTGAAGAAACCTGAG+AGG | - | chr4.2:91660321-91660340 | MS.gene053146:CDS | 45.0% | |
| CTGCGAAAAGGGCTAAAGTT+GGG | - | chr4.2:91660455-91660474 | MS.gene053146:intron | 45.0% | |
| GATCAGAGTCCTATGAAGCA+TGG | + | chr4.2:91660975-91660994 | None:intergenic | 45.0% | |
| GCTACAATTGTGCGTGTCAA+CGG | + | chr4.2:91661137-91661156 | None:intergenic | 45.0% | |
| GGAAGGCCAATCTGATGATA+AGG | - | chr4.2:91661599-91661618 | MS.gene053146:CDS | 45.0% | |
| GGAGAAGAACGAACCATTTG+GGG | + | chr4.2:91660830-91660849 | None:intergenic | 45.0% | |
| GGATCAGGAGGGATATGATA+AGG | - | chr4.2:91661569-91661588 | MS.gene053146:CDS | 45.0% | |
| GGGCTTCCTTATCATCAGAT+TGG | + | chr4.2:91661608-91661627 | None:intergenic | 45.0% | |
| GGTGGAAGAGTTAACAGATG+AGG | - | chr4.2:91661641-91661660 | MS.gene053146:CDS | 45.0% | |
| ! | ACTTTAGCCCTTTTCGCAGT+TGG | + | chr4.2:91660454-91660473 | None:intergenic | 45.0% |
| ! | TCTGGTGTCAGTAGAAGAGA+AGG | + | chr4.2:91660851-91660870 | None:intergenic | 45.0% |
| !! | GAGAAGTGTCCATGCTTCAT+AGG | - | chr4.2:91660963-91660982 | MS.gene053146:CDS | 45.0% |
| !! | TGTAATTGTAAGTGTCGGGG+CGG | - | chr4.2:91660932-91660951 | MS.gene053146:intron | 45.0% |
| ATGGCAGTGCTTTCCCCAAA+TGG | - | chr4.2:91660814-91660833 | MS.gene053146:intron | 50.0% | |
| CTGAAGTGAAGAAACCCGAG+AGG | - | chr4.2:91661307-91661326 | MS.gene053146:CDS | 50.0% | |
| GATTGTGTCCATGTCGTGTC+TGG | + | chr4.2:91660869-91660888 | None:intergenic | 50.0% | |
| GCATGGACACTTCTCGGATT+AGG | + | chr4.2:91660958-91660977 | None:intergenic | 50.0% | |
| GTTAACTCTTCCACCTCTCC+TGG | + | chr4.2:91661636-91661655 | None:intergenic | 50.0% | |
| TACTGACACCAGACACGACA+TGG | - | chr4.2:91660858-91660877 | MS.gene053146:intron | 50.0% | |
| ! | ATATTCGGACGAGGCACTCT+TGG | - | chr4.2:91660178-91660197 | MS.gene053146:CDS | 50.0% |
| CTTCCACCTCTCCTGGTGCA+GGG | + | chr4.2:91661629-91661648 | None:intergenic | 60.0% | |
| GATAAGGAAGCCCCTGCACC+AGG | - | chr4.2:91661615-91661634 | MS.gene053146:CDS | 60.0% | |
| TCTTCCACCTCTCCTGGTGC+AGG | + | chr4.2:91661630-91661649 | None:intergenic | 60.0% | |
| TGCGTGTCAACGGGTGCAAC+AGG | + | chr4.2:91661127-91661146 | None:intergenic | 60.0% | |
| TTCCACCTCTCCTGGTGCAG+GGG | + | chr4.2:91661628-91661647 | None:intergenic | 60.0% | |
| AGCCCCTGCACCAGGAGAGG+TGG | - | chr4.2:91661623-91661642 | MS.gene053146:CDS | 70.0% | |
| GGAAGCCCCTGCACCAGGAG+AGG | - | chr4.2:91661620-91661639 | MS.gene053146:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 91660122 | 91661668 | 91660122 | ID=MS.gene053146 |
| chr4.2 | mRNA | 91660122 | 91661668 | 91660122 | ID=MS.gene053146.t1;Parent=MS.gene053146 |
| chr4.2 | exon | 91661448 | 91661668 | 91661448 | ID=MS.gene053146.t1.exon1;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91661448 | 91661668 | 91661448 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91661274 | 91661361 | 91661274 | ID=MS.gene053146.t1.exon2;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91661274 | 91661361 | 91661274 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91660955 | 91661148 | 91660955 | ID=MS.gene053146.t1.exon3;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91660955 | 91661148 | 91660955 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91660615 | 91660688 | 91660615 | ID=MS.gene053146.t1.exon4;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91660615 | 91660688 | 91660615 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91660462 | 91660507 | 91660462 | ID=MS.gene053146.t1.exon5;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91660462 | 91660507 | 91660462 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91660317 | 91660365 | 91660317 | ID=MS.gene053146.t1.exon6;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91660317 | 91660365 | 91660317 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| chr4.2 | exon | 91660122 | 91660220 | 91660122 | ID=MS.gene053146.t1.exon7;Parent=MS.gene053146.t1 |
| chr4.2 | CDS | 91660122 | 91660220 | 91660122 | ID=cds.MS.gene053146.t1;Parent=MS.gene053146.t1 |
| Gene Sequence |
| Protein sequence |
