Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40359.t1 | XP_003603570.1 | 100 | 232 | 0 | 0 | 1 | 232 | 1 | 232 | 6.70E-129 | 469.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40359.t1 | Q8LD27 | 88.2 | 229 | 25 | 1 | 4 | 230 | 3 | 231 | 5.2e-114 | 411.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40359.t1 | B7FGZ8 | 100.0 | 232 | 0 | 0 | 1 | 232 | 1 | 232 | 4.8e-129 | 469.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene006641 | MS.gene40359 | PPI |
| MS.gene045566 | MS.gene40359 | PPI |
| MS.gene92186 | MS.gene40359 | PPI |
| MS.gene037240 | MS.gene40359 | PPI |
| MS.gene040231 | MS.gene40359 | PPI |
| MS.gene055714 | MS.gene40359 | PPI |
| MS.gene40359 | MS.gene71557 | PPI |
| MS.gene074000 | MS.gene40359 | PPI |
| MS.gene068080 | MS.gene40359 | PPI |
| MS.gene041280 | MS.gene40359 | PPI |
| MS.gene039040 | MS.gene40359 | PPI |
| MS.gene068078 | MS.gene40359 | PPI |
| MS.gene52459 | MS.gene40359 | PPI |
| MS.gene87139 | MS.gene40359 | PPI |
| MS.gene26537 | MS.gene40359 | PPI |
| MS.gene41890 | MS.gene40359 | PPI |
| MS.gene008760 | MS.gene40359 | PPI |
| MS.gene40359 | MS.gene46543 | PPI |
| MS.gene40359 | MS.gene39618 | PPI |
| MS.gene035129 | MS.gene40359 | PPI |
| MS.gene41888 | MS.gene40359 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40359.t1 | MTR_3g109210 | 100.000 | 232 | 0 | 0 | 1 | 232 | 1 | 232 | 1.95e-173 | 476 |
| MS.gene40359.t1 | MTR_3g108450 | 57.983 | 119 | 25 | 3 | 116 | 232 | 20 | 115 | 4.00e-32 | 114 |
| MS.gene40359.t1 | MTR_7g032930 | 31.282 | 195 | 131 | 2 | 1 | 193 | 24 | 217 | 1.22e-28 | 109 |
| MS.gene40359.t1 | MTR_7g037830 | 30.928 | 194 | 131 | 2 | 1 | 192 | 24 | 216 | 2.41e-28 | 108 |
| MS.gene40359.t1 | MTR_3g089040 | 31.351 | 185 | 125 | 2 | 13 | 196 | 54 | 237 | 2.24e-21 | 90.1 |
| MS.gene40359.t1 | MTR_5g079740 | 27.273 | 209 | 126 | 4 | 13 | 201 | 15 | 217 | 3.25e-16 | 75.1 |
| MS.gene40359.t1 | MTR_2g098010 | 27.273 | 209 | 126 | 4 | 13 | 201 | 15 | 217 | 1.48e-15 | 73.2 |
| MS.gene40359.t1 | MTR_5g006840 | 26.087 | 161 | 117 | 1 | 15 | 173 | 3 | 163 | 1.96e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40359.t1 | AT4G31300 | 88.210 | 229 | 25 | 1 | 4 | 230 | 3 | 231 | 1.36e-150 | 418 |
| MS.gene40359.t1 | AT4G31300 | 88.210 | 229 | 25 | 1 | 4 | 230 | 3 | 231 | 1.36e-150 | 418 |
| MS.gene40359.t1 | AT4G31300 | 87.826 | 230 | 25 | 2 | 4 | 230 | 3 | 232 | 4.35e-149 | 414 |
| MS.gene40359.t1 | AT5G40580 | 34.254 | 181 | 118 | 1 | 13 | 193 | 39 | 218 | 2.00e-29 | 111 |
| MS.gene40359.t1 | AT5G40580 | 34.254 | 181 | 118 | 1 | 13 | 193 | 39 | 218 | 2.00e-29 | 111 |
| MS.gene40359.t1 | AT3G27430 | 33.702 | 181 | 119 | 1 | 13 | 193 | 39 | 218 | 7.15e-29 | 110 |
| MS.gene40359.t1 | AT3G27430 | 33.889 | 180 | 118 | 1 | 13 | 192 | 39 | 217 | 1.08e-28 | 109 |
| MS.gene40359.t1 | AT5G40580 | 33.529 | 170 | 112 | 1 | 24 | 193 | 44 | 212 | 3.09e-25 | 100 |
| MS.gene40359.t1 | AT5G40580 | 33.529 | 170 | 112 | 1 | 24 | 193 | 44 | 212 | 3.09e-25 | 100 |
| MS.gene40359.t1 | AT3G27430 | 32.941 | 170 | 113 | 1 | 24 | 193 | 44 | 212 | 9.56e-25 | 99.0 |
| MS.gene40359.t1 | AT1G13060 | 31.937 | 191 | 128 | 2 | 10 | 199 | 54 | 243 | 2.58e-24 | 97.8 |
| MS.gene40359.t1 | AT3G26340 | 30.851 | 188 | 128 | 2 | 13 | 199 | 57 | 243 | 1.09e-21 | 90.9 |
| MS.gene40359.t1 | AT1G13060 | 28.372 | 215 | 128 | 3 | 10 | 199 | 54 | 267 | 3.22e-19 | 84.7 |
| MS.gene40359.t1 | AT1G13060 | 28.372 | 215 | 128 | 3 | 10 | 199 | 54 | 267 | 3.22e-19 | 84.7 |
| MS.gene40359.t1 | AT3G60820 | 25.366 | 205 | 127 | 4 | 13 | 197 | 15 | 213 | 1.45e-13 | 67.8 |
| MS.gene40359.t1 | AT3G60820 | 25.366 | 205 | 127 | 4 | 13 | 197 | 15 | 213 | 1.45e-13 | 67.8 |
| MS.gene40359.t1 | AT4G14800 | 24.845 | 161 | 119 | 1 | 15 | 173 | 3 | 163 | 9.10e-11 | 59.7 |
Find 69 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGAAGGCGGTCAGATTTA+TGG | 0.223743 | 3.3:+89137642 | MS.gene40359:CDS |
| CTTCATATGTTCATTGGCTC+TGG | 0.264442 | 3.3:-89140052 | None:intergenic |
| CTTGGTCATACCGTCTTTCC+AGG | 0.277307 | 3.3:-89138721 | None:intergenic |
| TACAACGGCGGCGTTGTTCT+TGG | 0.277415 | 3.3:+89136261 | MS.gene40359:CDS |
| AACTCATTGCTGGACATTCT+TGG | 0.313902 | 3.3:+89140025 | MS.gene40359:CDS |
| GCAGCAACCTTGACTGTTGC+AGG | 0.328240 | 3.3:-89137141 | None:intergenic |
| TGGCAGAATAACTTACAAAC+TGG | 0.333500 | 3.3:+89137594 | MS.gene40359:intron |
| TCAACAGGATCTAGTCAAAA+AGG | 0.335689 | 3.3:+89139766 | MS.gene40359:intron |
| CAATTTCTTCATATGTTCAT+TGG | 0.346922 | 3.3:-89140058 | None:intergenic |
| TTCATATGTTCATTGGCTCT+GGG | 0.365565 | 3.3:-89140051 | None:intergenic |
| TCCAGTTCATCATGCCATAT+TGG | 0.366769 | 3.3:-89139995 | None:intergenic |
| TCCAATATGGCATGATGAAC+TGG | 0.367474 | 3.3:+89139994 | MS.gene40359:CDS |
| AGGTTGCTGCAAACCTTGTT+CGG | 0.383622 | 3.3:+89137154 | MS.gene40359:CDS |
| TTACAAACTGGGTTAATTGT+TGG | 0.391047 | 3.3:+89137606 | MS.gene40359:CDS |
| TGGGTTAATTGTTGGTGGTT+GGG | 0.415254 | 3.3:+89137614 | MS.gene40359:CDS |
| GGAGGCTCACAACTCATTGC+TGG | 0.419158 | 3.3:+89140015 | MS.gene40359:CDS |
| TTTGCAGGCTGCAGATTCTC+AGG | 0.422283 | 3.3:+89136928 | MS.gene40359:intron |
| AATGTCTACGTCTGTCGCTC+TGG | 0.427619 | 3.3:+89136443 | MS.gene40359:CDS |
| TCATACCGTCTTTCCAGGCT+TGG | 0.433263 | 3.3:-89138716 | None:intergenic |
| AAGAACAACGCCGCCGTTGT+AGG | 0.434923 | 3.3:-89136259 | None:intergenic |
| TCTGGGTCCAGTTACTTGTA+TGG | 0.446754 | 3.3:+89138684 | MS.gene40359:CDS |
| ATCACCTGGGTAGAAATTCC+TGG | 0.453082 | 3.3:-89139966 | None:intergenic |
| GATGGTGGTTCCCATGGAAT+GGG | 0.459908 | 3.3:-89136226 | None:intergenic |
| CTGGGTTAATTGTTGGTGGT+TGG | 0.462258 | 3.3:+89137613 | MS.gene40359:CDS |
| CAGGTGATCAACTTCCAATA+TGG | 0.465504 | 3.3:+89139981 | MS.gene40359:CDS |
| AAGAAGTTAATTACCAGTGC+TGG | 0.483368 | 3.3:-89136298 | None:intergenic |
| TTTCAATGCTCCCCATTCCA+TGG | 0.486263 | 3.3:+89136215 | MS.gene40359:CDS |
| CAAATACCTCCAATAGCAAA+AGG | 0.491340 | 3.3:-89137696 | None:intergenic |
| CCATACCTCAGCTTCATCCT+TGG | 0.493435 | 3.3:-89138739 | None:intergenic |
| ACCGATGATGGTGGTTCCCA+TGG | 0.496891 | 3.3:-89136232 | None:intergenic |
| TGATGGTGGTTCCCATGGAA+TGG | 0.497886 | 3.3:-89136227 | None:intergenic |
| GCCGACTCTCGAACCAGCAC+TGG | 0.508306 | 3.3:+89136285 | MS.gene40359:CDS |
| CAGATTTATGGAGTTCCTCT+AGG | 0.514408 | 3.3:+89137654 | MS.gene40359:CDS |
| CTACGTCTGTCGCTCTGGAT+CGG | 0.523938 | 3.3:+89136448 | MS.gene40359:CDS |
| TTCAATGCTCCCCATTCCAT+GGG | 0.536391 | 3.3:+89136216 | MS.gene40359:CDS |
| CAAACTGGGTTAATTGTTGG+TGG | 0.536602 | 3.3:+89137609 | MS.gene40359:CDS |
| GATGTCTTACAATGACTGTT+CGG | 0.540432 | 3.3:-89139835 | None:intergenic |
| CATATTGGAAGTTGATCACC+TGG | 0.547295 | 3.3:-89139980 | None:intergenic |
| CCACTTACGTGTGTTGGTGA+AGG | 0.547404 | 3.3:-89136976 | None:intergenic |
| GGCAGAATAACTTACAAACT+GGG | 0.553451 | 3.3:+89137595 | MS.gene40359:intron |
| TCACTTGCCATTGCTCGTGA+TGG | 0.553661 | 3.3:+89139794 | MS.gene40359:CDS |
| ACCAGTGCTGGTTCGAGAGT+CGG | 0.558562 | 3.3:-89136286 | None:intergenic |
| TCATATGTTCATTGGCTCTG+GGG | 0.561140 | 3.3:-89140050 | None:intergenic |
| ATCGGTGTTACCTACAACGG+CGG | 0.569422 | 3.3:+89136249 | MS.gene40359:CDS |
| TCCATGGGAACCACCATCAT+CGG | 0.570798 | 3.3:+89136231 | MS.gene40359:CDS |
| GGTGGTTGGGACAAGTATGA+AGG | 0.571227 | 3.3:+89137627 | MS.gene40359:CDS |
| GTTGTAGGTAACACCGATGA+TGG | 0.577085 | 3.3:-89136244 | None:intergenic |
| TTTGACCAAGCCTGGAAAGA+CGG | 0.579591 | 3.3:+89138711 | MS.gene40359:CDS |
| ACTAGCACCATCACGAGCAA+TGG | 0.588426 | 3.3:-89139801 | None:intergenic |
| AATTAGCCACTTACGTGTGT+TGG | 0.591930 | 3.3:-89136982 | None:intergenic |
| TCCCTTGCAGATAAATTCAG+AGG | 0.616499 | 3.3:+89139937 | MS.gene40359:intron |
| ATTGCTCGTGATGGTGCTAG+TGG | 0.618953 | 3.3:+89139803 | MS.gene40359:CDS |
| TAAATTCAGAGGGAGTGACC+AGG | 0.622381 | 3.3:+89139948 | MS.gene40359:CDS |
| CCCTTGCAGATAAATTCAGA+GGG | 0.623795 | 3.3:+89139938 | MS.gene40359:intron |
| TGGACAACCTGCAACAGTCA+AGG | 0.625376 | 3.3:+89137134 | MS.gene40359:CDS |
| TATATGCGAGAAGCCGAACA+AGG | 0.628109 | 3.3:-89137167 | None:intergenic |
| ATTTATGGAGTTCCTCTAGG+TGG | 0.628981 | 3.3:+89137657 | MS.gene40359:CDS |
| TGTACAATTGTTCCACCTAG+AGG | 0.629585 | 3.3:-89137669 | None:intergenic |
| ATGGTGGTTCCCATGGAATG+GGG | 0.644231 | 3.3:-89136225 | None:intergenic |
| GCTCGTGATGGTGCTAGTGG+CGG | 0.657121 | 3.3:+89139806 | MS.gene40359:CDS |
| CTGGAAAGACGGTATGACCA+AGG | 0.661595 | 3.3:+89138722 | MS.gene40359:CDS |
| ATCATCGGTGTTACCTACAA+CGG | 0.663396 | 3.3:+89136246 | MS.gene40359:CDS |
| AATATGGCATGATGAACTGG+AGG | 0.666663 | 3.3:+89139997 | MS.gene40359:CDS |
| TATGACCAAGGATGAAGCTG+AGG | 0.674602 | 3.3:+89138734 | MS.gene40359:CDS |
| GTGACCAGGAATTTCTACCC+AGG | 0.683522 | 3.3:+89139962 | MS.gene40359:CDS |
| GTAGGTAACACCGATGATGG+TGG | 0.683839 | 3.3:-89136241 | None:intergenic |
| GGTTGGGACAAGTATGAAGG+CGG | 0.702895 | 3.3:+89137630 | MS.gene40359:CDS |
| GCTTCTCGCATATAACAACA+AGG | 0.720146 | 3.3:+89137176 | MS.gene40359:CDS |
| ATATTGGAAGTTGATCACCT+GGG | 0.757859 | 3.3:-89139979 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATATAGTCATTTA+GGG | + | chr3.3:89138877-89138896 | MS.gene40359:intron | 10.0% |
| !! | TATAATATATATAGTCATTT+AGG | + | chr3.3:89138876-89138895 | MS.gene40359:intron | 10.0% |
| !! | TATATATTAAAATATAGTCT+TGG | + | chr3.3:89139051-89139070 | MS.gene40359:intron | 10.0% |
| !! | TCTTACTAAAATTAAGTTTA+TGG | - | chr3.3:89136805-89136824 | None:intergenic | 15.0% |
| !!! | ATTTTTTTATGATGTGTTTT+GGG | + | chr3.3:89139591-89139610 | MS.gene40359:intron | 15.0% |
| !!! | GAGTTGTTTTTTTTTTTAAT+AGG | + | chr3.3:89138660-89138679 | MS.gene40359:intron | 15.0% |
| !!! | TATTTTTTTATGATGTGTTT+TGG | + | chr3.3:89139590-89139609 | MS.gene40359:intron | 15.0% |
| !!! | TTTTTTTTTTAATAGGATCT+GGG | + | chr3.3:89138667-89138686 | MS.gene40359:intron | 15.0% |
| !!! | TTTTTTTTTTTAATAGGATC+TGG | + | chr3.3:89138666-89138685 | MS.gene40359:intron | 15.0% |
| !! | AATTAGAAACTAATCTAAAC+CGG | + | chr3.3:89136835-89136854 | MS.gene40359:intron | 20.0% |
| !! | ATAAAGATAGTACAATACAA+AGG | + | chr3.3:89138257-89138276 | MS.gene40359:intron | 20.0% |
| !! | ATGAAAAGAAGAAAAGTAAA+AGG | + | chr3.3:89138012-89138031 | MS.gene40359:intron | 20.0% |
| !! | GAAAAATTGATTAAACTCAT+GGG | - | chr3.3:89136723-89136742 | None:intergenic | 20.0% |
| !! | GATGTTAGAAAATATTTATC+AGG | - | chr3.3:89138077-89138096 | None:intergenic | 20.0% |
| !! | TAAAGATAGTACAATACAAA+GGG | + | chr3.3:89138258-89138277 | MS.gene40359:intron | 20.0% |
| !! | TAACATAATAATATAGCAAG+TGG | - | chr3.3:89139375-89139394 | None:intergenic | 20.0% |
| !! | TGAAAAATTGATTAAACTCA+TGG | - | chr3.3:89136724-89136743 | None:intergenic | 20.0% |
| !! | TGAAAAGAAGAAAAGTAAAA+GGG | + | chr3.3:89138013-89138032 | MS.gene40359:intron | 20.0% |
| !! | TGTAAGAATTATAGTAACTT+CGG | - | chr3.3:89138047-89138066 | None:intergenic | 20.0% |
| !! | TTATGAATACAATCTCTATT+AGG | + | chr3.3:89137735-89137754 | MS.gene40359:intron | 20.0% |
| !!! | AAGGTAAATTGATTTTGATT+AGG | - | chr3.3:89136332-89136351 | None:intergenic | 20.0% |
| !!! | AGGTAAATTGATTTTGATTA+GGG | - | chr3.3:89136331-89136350 | None:intergenic | 20.0% |
| !!! | GTTGGATTTTATTTTAAGAA+AGG | - | chr3.3:89139298-89139317 | None:intergenic | 20.0% |
| !!! | GTTTTTTAAATGCTTTAGAA+AGG | + | chr3.3:89138196-89138215 | MS.gene40359:intron | 20.0% |
| !!! | TAATAAACATTAACTTGAAG+AGG | - | chr3.3:89137425-89137444 | None:intergenic | 20.0% |
| !!! | TAGTATGATGTTTTAGATTA+TGG | + | chr3.3:89137041-89137060 | MS.gene40359:intron | 20.0% |
| !!! | TTATGTTCTATATTTCTAAC+AGG | + | chr3.3:89139208-89139227 | MS.gene40359:intron | 20.0% |
| !!! | TTGTACTATCTTTATTTAAC+TGG | - | chr3.3:89138252-89138271 | None:intergenic | 20.0% |
| !!! | TTTGTAATTGTTGTTTCTAA+AGG | + | chr3.3:89136518-89136537 | MS.gene40359:intron | 20.0% |
| !!! | TTTTATAAACCTATGGTTTA+CGG | + | chr3.3:89138637-89138656 | MS.gene40359:intron | 20.0% |
| !!! | TTTTTTTATGATGTGTTTTG+GGG | + | chr3.3:89139592-89139611 | MS.gene40359:intron | 20.0% |
| ! | AAAAAATCCATACAAGTAAC+TGG | - | chr3.3:89138694-89138713 | None:intergenic | 25.0% |
| ! | AAAAACCCTCATAAACATAT+AGG | + | chr3.3:89136758-89136777 | MS.gene40359:intron | 25.0% |
| ! | AAAACCCTCATAAACATATA+GGG | + | chr3.3:89136759-89136778 | MS.gene40359:intron | 25.0% |
| ! | AAACTTGTAGAAACAAAAGA+TGG | + | chr3.3:89137929-89137948 | MS.gene40359:intron | 25.0% |
| ! | AATCCAAAGAATACAGTTAA+AGG | - | chr3.3:89138607-89138626 | None:intergenic | 25.0% |
| ! | ATCCAAAGAATACAGTTAAA+GGG | - | chr3.3:89138606-89138625 | None:intergenic | 25.0% |
| ! | ATTAGAAACTAATCTAAACC+GGG | + | chr3.3:89136836-89136855 | MS.gene40359:intron | 25.0% |
| ! | CAATTACAAACCCTAAAAAA+AGG | - | chr3.3:89136508-89136527 | None:intergenic | 25.0% |
| ! | CGAATCGAAAATTCAAAAAA+GGG | - | chr3.3:89136356-89136375 | None:intergenic | 25.0% |
| ! | GTAACATTTATCTTTAGACA+CGG | + | chr3.3:89139640-89139659 | MS.gene40359:intron | 25.0% |
| ! | TAAATGCAAAATAAGATTCC+AGG | - | chr3.3:89136663-89136682 | None:intergenic | 25.0% |
| ! | TAACAAAGAAAAGTCAAATC+AGG | - | chr3.3:89139619-89139638 | None:intergenic | 25.0% |
| ! | TAGTTATATTGACGTTGAAA+AGG | + | chr3.3:89138151-89138170 | MS.gene40359:intron | 25.0% |
| ! | TATAAAAACTGTAGCTATCA+TGG | - | chr3.3:89136640-89136659 | None:intergenic | 25.0% |
| ! | TATGCTTTCTCTATAACTAA+AGG | + | chr3.3:89138317-89138336 | MS.gene40359:intron | 25.0% |
| ! | TCGAATCGAAAATTCAAAAA+AGG | - | chr3.3:89136357-89136376 | None:intergenic | 25.0% |
| ! | TCTTTCTCTATCTCTAATTA+GGG | + | chr3.3:89136477-89136496 | MS.gene40359:intron | 25.0% |
| ! | TGAACATAAAAATACACCAT+CGG | - | chr3.3:89139749-89139768 | None:intergenic | 25.0% |
| ! | TGATGTAAATCTATTCTCAT+TGG | + | chr3.3:89137574-89137593 | MS.gene40359:intron | 25.0% |
| ! | TTCATTTCAAGATTTGACAT+CGG | + | chr3.3:89137818-89137837 | MS.gene40359:intron | 25.0% |
| ! | TTCTTTCTCTATCTCTAATT+AGG | + | chr3.3:89136476-89136495 | MS.gene40359:intron | 25.0% |
| ! | TTGAAATCTGTAAACAATCT+AGG | - | chr3.3:89137909-89137928 | None:intergenic | 25.0% |
| ! | TTTATAAACCTATGGTTTAC+GGG | + | chr3.3:89138638-89138657 | MS.gene40359:intron | 25.0% |
| ! | TTTGCATAGATCAATAATCT+AGG | - | chr3.3:89138526-89138545 | None:intergenic | 25.0% |
| !! | CTTTTTCTTGTTAATTAGAG+TGG | + | chr3.3:89137212-89137231 | MS.gene40359:intron | 25.0% |
| !! | TGCTTTCTTTTATAAACCTA+TGG | + | chr3.3:89138630-89138649 | MS.gene40359:intron | 25.0% |
| !!! | AAAGATGAGATTTTTGTTTG+TGG | + | chr3.3:89136885-89136904 | MS.gene40359:intron | 25.0% |
| !!! | ATCAAACTATTTCTTTTTGC+AGG | + | chr3.3:89136913-89136932 | MS.gene40359:intron | 25.0% |
| !!! | ATTTTAAGAAAGGTTCATGT+GGG | - | chr3.3:89139288-89139307 | None:intergenic | 25.0% |
| !!! | GTTTTATTTCAAGATCTTGA+AGG | - | chr3.3:89137317-89137336 | None:intergenic | 25.0% |
| !!! | TATTTTAAGAAAGGTTCATG+TGG | - | chr3.3:89139289-89139308 | None:intergenic | 25.0% |
| !!! | TGAATTTGCAATTCGTTTTT+TGG | + | chr3.3:89136605-89136624 | MS.gene40359:intron | 25.0% |
| AAAGTCCCTATATGTTTATG+AGG | - | chr3.3:89136767-89136786 | None:intergenic | 30.0% | |
| AACTTAACAGTCTCAACTAA+AGG | + | chr3.3:89139337-89139356 | MS.gene40359:intron | 30.0% | |
| AAGTCCCTATATGTTTATGA+GGG | - | chr3.3:89136766-89136785 | None:intergenic | 30.0% | |
| AGATGAAATAAGACATGAGT+AGG | + | chr3.3:89138835-89138854 | MS.gene40359:intron | 30.0% | |
| ATGAAATAAGACATGAGTAG+GGG | + | chr3.3:89138837-89138856 | MS.gene40359:intron | 30.0% | |
| CAATAACTCTAGCATCAAAA+AGG | - | chr3.3:89138108-89138127 | None:intergenic | 30.0% | |
| CGAAAATTCAAAAAAGGGAA+AGG | - | chr3.3:89136351-89136370 | None:intergenic | 30.0% | |
| GATGAAATAAGACATGAGTA+GGG | + | chr3.3:89138836-89138855 | MS.gene40359:intron | 30.0% | |
| GATGTCAAATCTTGAAATGA+AGG | - | chr3.3:89137819-89137838 | None:intergenic | 30.0% | |
| GATTTCTATCTCAATCCTTA+CGG | + | chr3.3:89139723-89139742 | MS.gene40359:intron | 30.0% | |
| TACCCTTTAACTGTATTCTT+TGG | + | chr3.3:89138601-89138620 | MS.gene40359:intron | 30.0% | |
| TCATGGGAGAATAATGTTAT+TGG | - | chr3.3:89136707-89136726 | None:intergenic | 30.0% | |
| TCATTTCAAGATTTGACATC+GGG | + | chr3.3:89137819-89137838 | MS.gene40359:intron | 30.0% | |
| TCTATAACTAAAGGTTTCCA+TGG | + | chr3.3:89138326-89138345 | MS.gene40359:intron | 30.0% | |
| TGTATGTCCACTTAAGTATT+TGG | + | chr3.3:89137548-89137567 | MS.gene40359:intron | 30.0% | |
| TTACAAACTGGGTTAATTGT+TGG | + | chr3.3:89137606-89137625 | MS.gene40359:CDS | 30.0% | |
| TTTAGTTGAGACTGTTAAGT+TGG | - | chr3.3:89139338-89139357 | None:intergenic | 30.0% | |
| ! | AAATTCTGAGAATGACTCTT+TGG | + | chr3.3:89139696-89139715 | MS.gene40359:intron | 30.0% |
| ! | AATTCTGAGAATGACTCTTT+GGG | + | chr3.3:89139697-89139716 | MS.gene40359:intron | 30.0% |
| ! | ATAGCTACAGTTTTTATACC+TGG | + | chr3.3:89136642-89136661 | MS.gene40359:intron | 30.0% |
| ! | ATATTTGTGGTTGAGTTGTT+AGG | - | chr3.3:89139260-89139279 | None:intergenic | 30.0% |
| ! | ATGATTGAGATTTGAGCTTT+TGG | + | chr3.3:89136568-89136587 | MS.gene40359:intron | 30.0% |
| ! | ATTTTATGCAGAATTCAGCT+TGG | + | chr3.3:89137114-89137133 | MS.gene40359:intron | 30.0% |
| ! | ATTTTCCTACAAAGTTGAGT+AGG | - | chr3.3:89138382-89138401 | None:intergenic | 30.0% |
| ! | CTTTTTGATGCTAGAGTTAT+TGG | + | chr3.3:89138106-89138125 | MS.gene40359:intron | 30.0% |
| ! | GTTTAGTTTAACTTAAGCGT+TGG | - | chr3.3:89139316-89139335 | None:intergenic | 30.0% |
| !! | GGTGTATTTTTATGTTCAAC+AGG | + | chr3.3:89139751-89139770 | MS.gene40359:intron | 30.0% |
| !! | GGTTGAATGTGAATTTGTTA+AGG | + | chr3.3:89138448-89138467 | MS.gene40359:intron | 30.0% |
| !! | TGTTTTTGCAAGTAAGGTTT+TGG | - | chr3.3:89139081-89139100 | None:intergenic | 30.0% |
| !! | TTACAAAAGAAGTATCCATC+AGG | - | chr3.3:89137510-89137529 | None:intergenic | 30.0% |
| !! | TTGTCGTGTTTGTGTTTTTA+TGG | + | chr3.3:89139504-89139523 | MS.gene40359:intron | 30.0% |
| !!! | AGGAAAATGTTTTAGTTGTG+AGG | + | chr3.3:89138394-89138413 | MS.gene40359:intron | 30.0% |
| !!! | TAGGGTTTAGCCTTTTTTTA+GGG | + | chr3.3:89136495-89136514 | MS.gene40359:intron | 30.0% |
| !!! | TGTGTTTGTGAGTTGATTTT+TGG | + | chr3.3:89138900-89138919 | MS.gene40359:intron | 30.0% |
| !!! | TTAGGGTTTAGCCTTTTTTT+AGG | + | chr3.3:89136494-89136513 | MS.gene40359:intron | 30.0% |
| !!! | TTTGTGAGTTGATTTTTGGA+GGG | + | chr3.3:89138904-89138923 | MS.gene40359:intron | 30.0% |
| AAATCCAAGCAATTGCTGAT+AGG | + | chr3.3:89137963-89137982 | MS.gene40359:intron | 35.0% | |
| AACAACAAGGTATGACTTTG+AGG | + | chr3.3:89137189-89137208 | MS.gene40359:intron | 35.0% | |
| AAGAAGTTAATTACCAGTGC+TGG | - | chr3.3:89136301-89136320 | None:intergenic | 35.0% | |
| ACAGTCATTGTAAGACATCA+TGG | + | chr3.3:89139839-89139858 | MS.gene40359:intron | 35.0% | |
| ACTATACTCTCATGCTAGTA+GGG | - | chr3.3:89138286-89138305 | None:intergenic | 35.0% | |
| ATCAGAGCCAAATACTTAAG+TGG | - | chr3.3:89137558-89137577 | None:intergenic | 35.0% | |
| CAAATACCTCCAATAGCAAA+AGG | - | chr3.3:89137699-89137718 | None:intergenic | 35.0% | |
| CAGATTGCAAGAGAATTACT+CGG | + | chr3.3:89137344-89137363 | MS.gene40359:intron | 35.0% | |
| CTGCATTCAATCAAGTTACA+CGG | - | chr3.3:89139562-89139581 | None:intergenic | 35.0% | |
| GATGTCTTACAATGACTGTT+CGG | - | chr3.3:89139838-89139857 | None:intergenic | 35.0% | |
| GCTACATGGATAAATGGAAA+AGG | - | chr3.3:89138360-89138379 | None:intergenic | 35.0% | |
| GGCAGAATAACTTACAAACT+GGG | + | chr3.3:89137595-89137614 | MS.gene40359:intron | 35.0% | |
| TAACTAAAGGTTTCCATGGA+AGG | + | chr3.3:89138330-89138349 | MS.gene40359:intron | 35.0% | |
| TACTATACTCTCATGCTAGT+AGG | - | chr3.3:89138287-89138306 | None:intergenic | 35.0% | |
| TAGTTGTGAGGCTTGTATAA+TGG | + | chr3.3:89138406-89138425 | MS.gene40359:intron | 35.0% | |
| TCAACAGGATCTAGTCAAAA+AGG | + | chr3.3:89139766-89139785 | MS.gene40359:intron | 35.0% | |
| TCTAGGTCAACTTTAGCAAA+AGG | - | chr3.3:89137892-89137911 | None:intergenic | 35.0% | |
| TGGCAGAATAACTTACAAAC+TGG | + | chr3.3:89137594-89137613 | MS.gene40359:intron | 35.0% | |
| TTAGTGGGATTTAGTTGTGT+TGG | + | chr3.3:89138801-89138820 | MS.gene40359:intron | 35.0% | |
| TTCCTAAGAATCAACGATGA+TGG | + | chr3.3:89137858-89137877 | MS.gene40359:intron | 35.0% | |
| TTGCAAAATGAGTTGTCTGT+TGG | + | chr3.3:89138772-89138791 | MS.gene40359:intron | 35.0% | |
| ! | ACGTTGAAAAGGCATATGAT+TGG | + | chr3.3:89138162-89138181 | MS.gene40359:intron | 35.0% |
| ! | ACTAGCATGAGAGTATAGTA+TGG | + | chr3.3:89138287-89138306 | MS.gene40359:intron | 35.0% |
| ! | ATATTGGAAGTTGATCACCT+GGG | - | chr3.3:89139982-89140001 | None:intergenic | 35.0% |
| ! | ATTCTGAGAATGACTCTTTG+GGG | + | chr3.3:89139698-89139717 | MS.gene40359:intron | 35.0% |
| ! | ATTGCTTGTTTCACTTGCTA+AGG | + | chr3.3:89137788-89137807 | MS.gene40359:intron | 35.0% |
| ! | CATATGATTGGTTCACATAG+TGG | + | chr3.3:89138174-89138193 | MS.gene40359:intron | 35.0% |
| ! | CATGTGGGCTTTTATATTTG+TGG | - | chr3.3:89139273-89139292 | None:intergenic | 35.0% |
| ! | CTAGCATGAGAGTATAGTAT+GGG | + | chr3.3:89138288-89138307 | MS.gene40359:intron | 35.0% |
| ! | TAAGAATCAACGATGATGGT+AGG | + | chr3.3:89137862-89137881 | MS.gene40359:intron | 35.0% |
| ! | TAGCATGAGAGTATAGTATG+GGG | + | chr3.3:89138289-89138308 | MS.gene40359:intron | 35.0% |
| !! | GTACAACAACCTTTTGCTAT+TGG | + | chr3.3:89137687-89137706 | MS.gene40359:CDS | 35.0% |
| !! | TACCATCATCGTTGATTCTT+AGG | - | chr3.3:89137863-89137882 | None:intergenic | 35.0% |
| !! | TTTTGCAAGTAAGGTTTTGG+AGG | - | chr3.3:89139078-89139097 | None:intergenic | 35.0% |
| !!! | ACTAGCGTTTTGGAATTTAG+TGG | - | chr3.3:89137251-89137270 | None:intergenic | 35.0% |
| !!! | AGGGACTTTTTCACAAATGA+AGG | + | chr3.3:89136778-89136797 | MS.gene40359:intron | 35.0% |
| !!! | GGGACTTTTTCACAAATGAA+GGG | + | chr3.3:89136779-89136798 | MS.gene40359:intron | 35.0% |
| !!! | GTTTGTGAGTTGATTTTTGG+AGG | + | chr3.3:89138903-89138922 | MS.gene40359:intron | 35.0% |
| !!! | TTTGCAAGTAAGGTTTTGGA+GGG | - | chr3.3:89139077-89139096 | None:intergenic | 35.0% |
| AAACAACTCCCGTAAACCAT+AGG | - | chr3.3:89138649-89138668 | None:intergenic | 40.0% | |
| AAACTAATCTAAACCGGGCT+TGG | + | chr3.3:89136841-89136860 | MS.gene40359:intron | 40.0% | |
| AACTCATTGCTGGACATTCT+TGG | + | chr3.3:89140025-89140044 | MS.gene40359:CDS | 40.0% | |
| AATATGGCATGATGAACTGG+AGG | + | chr3.3:89139997-89140016 | MS.gene40359:CDS | 40.0% | |
| AATTAGCCACTTACGTGTGT+TGG | - | chr3.3:89136985-89137004 | None:intergenic | 40.0% | |
| ACAAAGTTGAGTAGGCTACA+TGG | - | chr3.3:89138374-89138393 | None:intergenic | 40.0% | |
| ACTTGCAAAAACACCCTTCA+GGG | + | chr3.3:89139088-89139107 | MS.gene40359:intron | 40.0% | |
| ATTCGATCTCTCTCACTTTC+AGG | + | chr3.3:89136371-89136390 | MS.gene40359:intron | 40.0% | |
| ATTTATGGAGTTCCTCTAGG+TGG | + | chr3.3:89137657-89137676 | MS.gene40359:CDS | 40.0% | |
| CAAACTGGGTTAATTGTTGG+TGG | + | chr3.3:89137609-89137628 | MS.gene40359:CDS | 40.0% | |
| CAGATTTATGGAGTTCCTCT+AGG | + | chr3.3:89137654-89137673 | MS.gene40359:CDS | 40.0% | |
| CAGGTGATCAACTTCCAATA+TGG | + | chr3.3:89139981-89140000 | MS.gene40359:CDS | 40.0% | |
| CCCTCTGAATTTATCTGCAA+GGG | - | chr3.3:89139941-89139960 | None:intergenic | 40.0% | |
| CCCTTGCAGATAAATTCAGA+GGG | + | chr3.3:89139938-89139957 | MS.gene40359:intron | 40.0% | |
| CTCTCTCTTTCGGTCTAATA+TGG | + | chr3.3:89137989-89138008 | MS.gene40359:intron | 40.0% | |
| GACAATGCAACACAGAAACA+TGG | - | chr3.3:89139483-89139502 | None:intergenic | 40.0% | |
| GAGTAGGCTACATGGATAAA+TGG | - | chr3.3:89138366-89138385 | None:intergenic | 40.0% | |
| GAGTTGTTAGGCAAAGAGTA+AGG | - | chr3.3:89139248-89139267 | None:intergenic | 40.0% | |
| GCTTCTCGCATATAACAACA+AGG | + | chr3.3:89137176-89137195 | MS.gene40359:CDS | 40.0% | |
| GGTTGCTTCTTTCATTGAGA+AGG | + | chr3.3:89138427-89138446 | MS.gene40359:intron | 40.0% | |
| GTGACATTATGTCATCCTGA+TGG | + | chr3.3:89137492-89137511 | MS.gene40359:intron | 40.0% | |
| TACTTGCAAAAACACCCTTC+AGG | + | chr3.3:89139087-89139106 | MS.gene40359:intron | 40.0% | |
| TATCTTTAGACACGGACAGT+AGG | + | chr3.3:89139648-89139667 | MS.gene40359:intron | 40.0% | |
| TATGAAGGCGGTCAGATTTA+TGG | + | chr3.3:89137642-89137661 | MS.gene40359:CDS | 40.0% | |
| TCCAATATGGCATGATGAAC+TGG | + | chr3.3:89139994-89140013 | MS.gene40359:CDS | 40.0% | |
| TCCAGTTCATCATGCCATAT+TGG | - | chr3.3:89139998-89140017 | None:intergenic | 40.0% | |
| TCCCTCTGAATTTATCTGCA+AGG | - | chr3.3:89139942-89139961 | None:intergenic | 40.0% | |
| TCCCTTGCAGATAAATTCAG+AGG | + | chr3.3:89139937-89139956 | MS.gene40359:intron | 40.0% | |
| TGATGCTAGAGTTATTGGAG+TGG | + | chr3.3:89138111-89138130 | MS.gene40359:intron | 40.0% | |
| TGTACAATTGTTCCACCTAG+AGG | - | chr3.3:89137672-89137691 | None:intergenic | 40.0% | |
| TGTAGCCTACTCAACTTTGT+AGG | + | chr3.3:89138374-89138393 | MS.gene40359:intron | 40.0% | |
| TTCCAAAACGCTAGTTGCAA+TGG | + | chr3.3:89137256-89137275 | MS.gene40359:intron | 40.0% | |
| ! | AAGCTTGAGTTGTTAGGTGT+AGG | + | chr3.3:89139164-89139183 | MS.gene40359:intron | 40.0% |
| ! | AGCTTGAGTTGTTAGGTGTA+GGG | + | chr3.3:89139165-89139184 | MS.gene40359:intron | 40.0% |
| ! | CATATTGGAAGTTGATCACC+TGG | - | chr3.3:89139983-89140002 | None:intergenic | 40.0% |
| ! | GATTTTGTCAGATGCACGAT+TGG | - | chr3.3:89136408-89136427 | None:intergenic | 40.0% |
| ! | GTCTGTTGGCAACTTTTAGT+GGG | + | chr3.3:89138786-89138805 | MS.gene40359:intron | 40.0% |
| ! | TCGTCATTGCAATTGAGTTG+AGG | + | chr3.3:89137461-89137480 | MS.gene40359:intron | 40.0% |
| ! | TGACTTGCATGTCAATTTGC+TGG | + | chr3.3:89138477-89138496 | MS.gene40359:intron | 40.0% |
| ! | TGTCTGTTGGCAACTTTTAG+TGG | + | chr3.3:89138785-89138804 | MS.gene40359:intron | 40.0% |
| ! | TTCTGAGAATGACTCTTTGG+GGG | + | chr3.3:89139699-89139718 | MS.gene40359:intron | 40.0% |
| !! | ATCATCGGTGTTACCTACAA+CGG | + | chr3.3:89136246-89136265 | MS.gene40359:CDS | 40.0% |
| !! | ATGTCAATTTGCTGGTCATG+TGG | + | chr3.3:89138485-89138504 | MS.gene40359:intron | 40.0% |
| !! | CAATTGAGTTGAGGATTAGC+AGG | + | chr3.3:89137470-89137489 | MS.gene40359:intron | 40.0% |
| !! | GATTTTTGGAGGGCTTTGTA+GGG | + | chr3.3:89138914-89138933 | MS.gene40359:intron | 40.0% |
| !! | TCATATGTTCATTGGCTCTG+GGG | - | chr3.3:89140053-89140072 | None:intergenic | 40.0% |
| !! | TGATTTTTGGAGGGCTTTGT+AGG | + | chr3.3:89138913-89138932 | MS.gene40359:intron | 40.0% |
| !! | TGGGTTAATTGTTGGTGGTT+GGG | + | chr3.3:89137614-89137633 | MS.gene40359:CDS | 40.0% |
| !!! | ATGGATTTTTTGACCAAGCC+TGG | + | chr3.3:89138703-89138722 | MS.gene40359:CDS | 40.0% |
| !!! | CAACAACCTTTTGCTATTGG+AGG | + | chr3.3:89137690-89137709 | MS.gene40359:CDS | 40.0% |
| !!! | GAAGGGTGTTTTTGCAAGTA+AGG | - | chr3.3:89139087-89139106 | None:intergenic | 40.0% |
| AAAATACACCATCGGCCGTA+AGG | - | chr3.3:89139741-89139760 | None:intergenic | 45.0% | |
| AGGTTGCTGCAAACCTTGTT+CGG | + | chr3.3:89137154-89137173 | MS.gene40359:CDS | 45.0% | |
| ATCACCTGGGTAGAAATTCC+TGG | - | chr3.3:89139969-89139988 | None:intergenic | 45.0% | |
| CAAAACGCTAGTTGCAATGG+TGG | + | chr3.3:89137259-89137278 | MS.gene40359:intron | 45.0% | |
| CAAGGATGAAGCTGAGGTAT+GGG | + | chr3.3:89138740-89138759 | MS.gene40359:intron | 45.0% | |
| GTTGTAGGTAACACCGATGA+TGG | - | chr3.3:89136247-89136266 | None:intergenic | 45.0% | |
| TAAATTCAGAGGGAGTGACC+AGG | + | chr3.3:89139948-89139967 | MS.gene40359:CDS | 45.0% | |
| TATATGCGAGAAGCCGAACA+AGG | - | chr3.3:89137170-89137189 | None:intergenic | 45.0% | |
| TATGACCAAGGATGAAGCTG+AGG | + | chr3.3:89138734-89138753 | MS.gene40359:CDS | 45.0% | |
| TCTGGGTCCAGTTACTTGTA+TGG | + | chr3.3:89138684-89138703 | MS.gene40359:CDS | 45.0% | |
| TGATAGGCTGCTCTCTCTTT+CGG | + | chr3.3:89137979-89137998 | MS.gene40359:intron | 45.0% | |
| TGCTGGTCATGTGGTCAAAT+TGG | + | chr3.3:89138494-89138513 | MS.gene40359:intron | 45.0% | |
| TGGAAAAGGATGACCTTCCA+TGG | - | chr3.3:89138346-89138365 | None:intergenic | 45.0% | |
| TTCAATGCTCCCCATTCCAT+GGG | + | chr3.3:89136216-89136235 | MS.gene40359:CDS | 45.0% | |
| TTTCAATGCTCCCCATTCCA+TGG | + | chr3.3:89136215-89136234 | MS.gene40359:CDS | 45.0% | |
| TTTGACCAAGCCTGGAAAGA+CGG | + | chr3.3:89138711-89138730 | MS.gene40359:CDS | 45.0% | |
| ! | CACCATTGCAACTAGCGTTT+TGG | - | chr3.3:89137261-89137280 | None:intergenic | 45.0% |
| ! | GCTCAGAAGCTTGAGTTGTT+AGG | + | chr3.3:89139158-89139177 | MS.gene40359:intron | 45.0% |
| !! | CTGGGTTAATTGTTGGTGGT+TGG | + | chr3.3:89137613-89137632 | MS.gene40359:CDS | 45.0% |
| !! | GGGATTTAGTTGTGTTGGCT+TGG | + | chr3.3:89138806-89138825 | MS.gene40359:intron | 45.0% |
| !!! | TTAATATATATTAGATATTT+TGG | - | chr3.3:89139041-89139060 | None:intergenic | 5.0% |
| AAACACCCTTCAGGGAGAGT+AGG | + | chr3.3:89139096-89139115 | MS.gene40359:intron | 50.0% | |
| AATGTCTACGTCTGTCGCTC+TGG | + | chr3.3:89136443-89136462 | MS.gene40359:CDS | 50.0% | |
| ACTAGCACCATCACGAGCAA+TGG | - | chr3.3:89139804-89139823 | None:intergenic | 50.0% | |
| ATCTCAATCCTTACGGCCGA+TGG | + | chr3.3:89139730-89139749 | MS.gene40359:intron | 50.0% | |
| ATGGTGGTTCCCATGGAATG+GGG | - | chr3.3:89136228-89136247 | None:intergenic | 50.0% | |
| CCAAGGATGAAGCTGAGGTA+TGG | + | chr3.3:89138739-89138758 | MS.gene40359:intron | 50.0% | |
| CCATACCTCAGCTTCATCCT+TGG | - | chr3.3:89138742-89138761 | None:intergenic | 50.0% | |
| CCTTCACCAACACACGTAAG+TGG | + | chr3.3:89136976-89136995 | MS.gene40359:intron | 50.0% | |
| CTAATCTAAACCGGGCTTGG+AGG | + | chr3.3:89136844-89136863 | MS.gene40359:intron | 50.0% | |
| CTGGAAAGACGGTATGACCA+AGG | + | chr3.3:89138722-89138741 | MS.gene40359:CDS | 50.0% | |
| CTTGGTCATACCGTCTTTCC+AGG | - | chr3.3:89138724-89138743 | None:intergenic | 50.0% | |
| GCAGCCTATCAGCAATTGCT+TGG | - | chr3.3:89137970-89137989 | None:intergenic | 50.0% | |
| GGTGGTTGGGACAAGTATGA+AGG | + | chr3.3:89137627-89137646 | MS.gene40359:CDS | 50.0% | |
| GGTTGGGACAAGTATGAAGG+CGG | + | chr3.3:89137630-89137649 | MS.gene40359:CDS | 50.0% | |
| GTGACCAGGAATTTCTACCC+AGG | + | chr3.3:89139962-89139981 | MS.gene40359:CDS | 50.0% | |
| TCACTTGCCATTGCTCGTGA+TGG | + | chr3.3:89139794-89139813 | MS.gene40359:CDS | 50.0% | |
| TCATACCGTCTTTCCAGGCT+TGG | - | chr3.3:89138719-89138738 | None:intergenic | 50.0% | |
| TCCATGGGAACCACCATCAT+CGG | + | chr3.3:89136231-89136250 | MS.gene40359:CDS | 50.0% | |
| TGCAACCTACTCTCCCTGAA+GGG | - | chr3.3:89139104-89139123 | None:intergenic | 50.0% | |
| TGGACAACCTGCAACAGTCA+AGG | + | chr3.3:89137134-89137153 | MS.gene40359:CDS | 50.0% | |
| TTCATTGATGCCTCCAAGCC+CGG | - | chr3.3:89136857-89136876 | None:intergenic | 50.0% | |
| TTTGCAGGCTGCAGATTCTC+AGG | + | chr3.3:89136928-89136947 | MS.gene40359:intron | 50.0% | |
| ! | ATTGCTCGTGATGGTGCTAG+TGG | + | chr3.3:89139803-89139822 | MS.gene40359:CDS | 50.0% |
| ! | CCACTTACGTGTGTTGGTGA+AGG | - | chr3.3:89136979-89136998 | None:intergenic | 50.0% |
| ! | GATGGTGGTTCCCATGGAAT+GGG | - | chr3.3:89136229-89136248 | None:intergenic | 50.0% |
| ! | GTAGGTAACACCGATGATGG+TGG | - | chr3.3:89136244-89136263 | None:intergenic | 50.0% |
| !! | ATCGGTGTTACCTACAACGG+CGG | + | chr3.3:89136249-89136268 | MS.gene40359:CDS | 50.0% |
| !! | TGATGGTGGTTCCCATGGAA+TGG | - | chr3.3:89136230-89136249 | None:intergenic | 50.0% |
| AAGAACAACGCCGCCGTTGT+AGG | - | chr3.3:89136262-89136281 | None:intergenic | 55.0% | |
| CTGCAACCTACTCTCCCTGA+AGG | - | chr3.3:89139105-89139124 | None:intergenic | 55.0% | |
| GCAGCAACCTTGACTGTTGC+AGG | - | chr3.3:89137144-89137163 | None:intergenic | 55.0% | |
| GGAGGCTCACAACTCATTGC+TGG | + | chr3.3:89140015-89140034 | MS.gene40359:CDS | 55.0% | |
| TACAACGGCGGCGTTGTTCT+TGG | + | chr3.3:89136261-89136280 | MS.gene40359:CDS | 55.0% | |
| ! | CTACGTCTGTCGCTCTGGAT+CGG | + | chr3.3:89136448-89136467 | MS.gene40359:CDS | 55.0% |
| !! | ACCAGTGCTGGTTCGAGAGT+CGG | - | chr3.3:89136289-89136308 | None:intergenic | 55.0% |
| !! | ACCGATGATGGTGGTTCCCA+TGG | - | chr3.3:89136235-89136254 | None:intergenic | 55.0% |
| !! | GGGCTTGGAGGCATCAATGA+AGG | + | chr3.3:89136856-89136875 | MS.gene40359:intron | 55.0% |
| ! | GCTCGTGATGGTGCTAGTGG+CGG | + | chr3.3:89139806-89139825 | MS.gene40359:CDS | 60.0% |
| ! | GCCGACTCTCGAACCAGCAC+TGG | + | chr3.3:89136285-89136304 | MS.gene40359:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89136201 | 89140072 | 89136201 | ID=MS.gene40359 |
| chr3.3 | mRNA | 89136201 | 89140072 | 89136201 | ID=MS.gene40359.t1;Parent=MS.gene40359 |
| chr3.3 | exon | 89136201 | 89136306 | 89136201 | ID=MS.gene40359.t1.exon1;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89136201 | 89136306 | 89136201 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89136393 | 89136469 | 89136393 | ID=MS.gene40359.t1.exon2;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89136393 | 89136469 | 89136393 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89136935 | 89136990 | 89136935 | ID=MS.gene40359.t1.exon3;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89136935 | 89136990 | 89136935 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89137125 | 89137197 | 89137125 | ID=MS.gene40359.t1.exon4;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89137125 | 89137197 | 89137125 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89137600 | 89137711 | 89137600 | ID=MS.gene40359.t1.exon5;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89137600 | 89137711 | 89137600 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89138682 | 89138755 | 89138682 | ID=MS.gene40359.t1.exon6;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89138682 | 89138755 | 89138682 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89139773 | 89139847 | 89139773 | ID=MS.gene40359.t1.exon7;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89139773 | 89139847 | 89139773 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| chr3.3 | exon | 89139947 | 89140072 | 89139947 | ID=MS.gene40359.t1.exon8;Parent=MS.gene40359.t1 |
| chr3.3 | CDS | 89139947 | 89140072 | 89139947 | ID=cds.MS.gene40359.t1;Parent=MS.gene40359.t1 |
| Gene Sequence |
| Protein sequence |
