Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006641.t1 | XP_013442471.1 | 100 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 7.00E-126 | 459.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006641.t1 | O23708 | 94.0 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 1.7e-120 | 433.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006641.t1 | I3SFE3 | 100.0 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 5.1e-126 | 459.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006641.t1 | MTR_0167s0060 | 100.000 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 9.45e-175 | 479 |
| MS.gene006641.t1 | MTR_8g075320 | 38.767 | 227 | 134 | 3 | 4 | 228 | 2 | 225 | 1.11e-51 | 168 |
| MS.gene006641.t1 | MTR_2g060830 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 1.25e-51 | 168 |
| MS.gene006641.t1 | MTR_7g070070 | 36.752 | 234 | 141 | 4 | 5 | 231 | 4 | 237 | 6.13e-49 | 161 |
| MS.gene006641.t1 | MTR_5g016590 | 36.325 | 234 | 142 | 4 | 5 | 231 | 4 | 237 | 4.15e-48 | 159 |
| MS.gene006641.t1 | MTR_8g464460 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 5.18e-48 | 159 |
| MS.gene006641.t1 | MTR_1g112250 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.84e-47 | 157 |
| MS.gene006641.t1 | MTR_2g016050 | 37.445 | 227 | 137 | 3 | 4 | 228 | 2 | 225 | 2.35e-46 | 154 |
| MS.gene006641.t1 | MTR_1g022410 | 35.111 | 225 | 141 | 3 | 1 | 222 | 1 | 223 | 1.79e-41 | 143 |
| MS.gene006641.t1 | MTR_6g024135 | 36.612 | 183 | 116 | 0 | 6 | 188 | 8 | 190 | 4.38e-39 | 135 |
| MS.gene006641.t1 | MTR_4g012740 | 28.409 | 264 | 144 | 6 | 1 | 222 | 232 | 492 | 2.81e-26 | 106 |
| MS.gene006641.t1 | MTR_4g057090 | 29.032 | 217 | 142 | 7 | 9 | 218 | 91 | 302 | 8.63e-16 | 75.5 |
| MS.gene006641.t1 | MTR_6g013300 | 28.571 | 189 | 123 | 4 | 32 | 214 | 136 | 318 | 9.07e-14 | 69.7 |
| MS.gene006641.t1 | MTR_3g113730 | 32.692 | 104 | 67 | 2 | 122 | 222 | 6 | 109 | 4.74e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006641.t1 | AT1G16470 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.50e-164 | 452 |
| MS.gene006641.t1 | AT1G16470 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.50e-164 | 452 |
| MS.gene006641.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
| MS.gene006641.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
| MS.gene006641.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
| MS.gene006641.t1 | AT5G66140 | 39.035 | 228 | 133 | 4 | 4 | 228 | 2 | 226 | 3.83e-50 | 164 |
| MS.gene006641.t1 | AT3G51260 | 38.596 | 228 | 134 | 4 | 4 | 228 | 2 | 226 | 8.88e-49 | 160 |
| MS.gene006641.t1 | AT3G51260 | 39.623 | 212 | 123 | 3 | 4 | 213 | 2 | 210 | 1.60e-48 | 160 |
| MS.gene006641.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.62e-47 | 157 |
| MS.gene006641.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.62e-47 | 157 |
| MS.gene006641.t1 | AT3G14290 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 3.49e-47 | 156 |
| MS.gene006641.t1 | AT5G35590 | 37.229 | 231 | 140 | 4 | 6 | 231 | 9 | 239 | 3.74e-47 | 156 |
| MS.gene006641.t1 | AT3G22110 | 36.245 | 229 | 136 | 4 | 5 | 230 | 4 | 225 | 2.25e-46 | 154 |
| MS.gene006641.t1 | AT2G05840 | 35.931 | 231 | 143 | 4 | 6 | 231 | 9 | 239 | 1.90e-44 | 149 |
| MS.gene006641.t1 | AT5G42790 | 36.444 | 225 | 138 | 3 | 1 | 222 | 1 | 223 | 3.01e-42 | 145 |
| MS.gene006641.t1 | AT1G47250 | 34.034 | 238 | 152 | 3 | 1 | 235 | 1 | 236 | 1.72e-40 | 140 |
| MS.gene006641.t1 | AT2G05840 | 34.928 | 209 | 132 | 3 | 6 | 210 | 9 | 217 | 1.95e-38 | 133 |
| MS.gene006641.t1 | AT2G27020 | 32.710 | 214 | 143 | 1 | 6 | 218 | 8 | 221 | 3.07e-36 | 128 |
| MS.gene006641.t1 | AT2G05840 | 35.955 | 178 | 112 | 2 | 6 | 181 | 9 | 186 | 4.45e-35 | 124 |
| MS.gene006641.t1 | AT2G27020 | 32.710 | 214 | 143 | 1 | 6 | 218 | 110 | 323 | 5.35e-35 | 127 |
| MS.gene006641.t1 | AT4G15165 | 26.754 | 228 | 117 | 4 | 5 | 230 | 4 | 183 | 3.36e-23 | 93.6 |
Find 50 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAAATTGATGATTATT+TGG | 0.158426 | 4.1:+26896032 | MS.gene006641:CDS |
| GCTTTAACCGCTGTTGGTTC+TGG | 0.270331 | 4.1:+26891046 | MS.gene006641:CDS |
| GGAGTGTCTCTACTTGTTGC+TGG | 0.282240 | 4.1:+26893470 | MS.gene006641:CDS |
| ATGCAGGAATTTACTCAGTC+TGG | 0.330425 | 4.1:+26892662 | MS.gene006641:CDS |
| GTTGCTGGGTTTGATGATAA+TGG | 0.343877 | 4.1:+26893485 | MS.gene006641:CDS |
| TTCTAGGTACACCGATGATA+TGG | 0.345310 | 4.1:+26894086 | MS.gene006641:intron |
| GCTTCATCAACCAATATAGA+TGG | 0.347807 | 4.1:-26891130 | None:intergenic |
| GTCTTTGTTGTTCAGTGGCA+TGG | 0.357696 | 4.1:+26892150 | MS.gene006641:intron |
| CGAACCAATACTCGGAAATC+AGG | 0.360536 | 4.1:-26892175 | None:intergenic |
| GAAGAAACTCCCATCTATAT+TGG | 0.368608 | 4.1:+26891120 | MS.gene006641:CDS |
| CAAACATAGGTGTTGTATAC+AGG | 0.379055 | 4.1:+26891277 | MS.gene006641:CDS |
| AACATTGAAATAGGCATCAT+TGG | 0.380931 | 4.1:+26894719 | MS.gene006641:CDS |
| GATAGTGGTGTCCGGCCATT+TGG | 0.384275 | 4.1:+26893449 | MS.gene006641:intron |
| GCTGAAATTGATGATTATTT+GGG | 0.402207 | 4.1:+26896033 | MS.gene006641:CDS |
| TAATGGACCACAATTATATC+AGG | 0.419454 | 4.1:+26893502 | MS.gene006641:CDS |
| CTCGGTATCAAAGCTGCAAA+TGG | 0.434339 | 4.1:+26891079 | MS.gene006641:CDS |
| TTGCTGTAGGTGGATCCATC+AGG | 0.438333 | 4.1:+26893824 | MS.gene006641:intron |
| TCCCTGTCACTCAACTTGTA+AGG | 0.441365 | 4.1:+26892624 | MS.gene006641:CDS |
| GGGTCCTGATTTCCGAGTAT+TGG | 0.446397 | 4.1:+26892171 | MS.gene006641:CDS |
| GAGTGTCTCTACTTGTTGCT+GGG | 0.452530 | 4.1:+26893471 | MS.gene006641:CDS |
| TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 4.1:+26893857 | MS.gene006641:CDS |
| ACAAGTTGAGTGACAGGGAT+TGG | 0.462122 | 4.1:-26892620 | None:intergenic |
| GGAAGTTGCTGCCGTTATGC+AGG | 0.465077 | 4.1:+26892646 | MS.gene006641:CDS |
| TCTTTGTTGTTCAGTGGCAT+GGG | 0.469804 | 4.1:+26892151 | MS.gene006641:intron |
| TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 4.1:+26893856 | MS.gene006641:CDS |
| TCCCTTACAAGTTGAGTGAC+AGG | 0.479106 | 4.1:-26892626 | None:intergenic |
| CTGTATACAACACCTATGTT+TGG | 0.497013 | 4.1:-26891276 | None:intergenic |
| TTTGTCCTGATAGTGGTGTC+CGG | 0.504083 | 4.1:+26893441 | MS.gene006641:intron |
| GAGCATGCTTTAACCGCTGT+TGG | 0.504625 | 4.1:+26891040 | MS.gene006641:CDS |
| CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 4.1:+26893897 | MS.gene006641:CDS |
| TGCAGGAATTTACTCAGTCT+GGG | 0.516768 | 4.1:+26892663 | MS.gene006641:CDS |
| GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 4.1:+26891061 | MS.gene006641:CDS |
| AAATAATCATCAATTTCAGC+TGG | 0.537679 | 4.1:-26896030 | None:intergenic |
| CCCTGTCACTCAACTTGTAA+GGG | 0.541679 | 4.1:+26892625 | MS.gene006641:CDS |
| CTGAGTAAATTCCTGCATAA+CGG | 0.544918 | 4.1:-26892657 | None:intergenic |
| CCCTTACAAGTTGAGTGACA+GGG | 0.551681 | 4.1:-26892625 | None:intergenic |
| CTTCATCAACCAATATAGAT+GGG | 0.557361 | 4.1:-26891129 | None:intergenic |
| ACAAGTAGAGACACTCCAAA+TGG | 0.573334 | 4.1:-26893464 | None:intergenic |
| GGTAGTGTACTTTATATAGT+CGG | 0.574711 | 4.1:-26892228 | None:intergenic |
| GCAATATTGACACTCAAGGA+AGG | 0.576853 | 4.1:+26894132 | MS.gene006641:CDS |
| TGCCATACCTGATATAATTG+TGG | 0.592498 | 4.1:-26893509 | None:intergenic |
| ATCATCAAGCTCCATATCAT+CGG | 0.601420 | 4.1:-26894097 | None:intergenic |
| GTAGAGACACTCCAAATGGC+CGG | 0.601757 | 4.1:-26893460 | None:intergenic |
| CAGTTATTAACACCAAACAT+AGG | 0.608948 | 4.1:+26891264 | MS.gene006641:CDS |
| CACAGCAATATTGACACTCA+AGG | 0.611442 | 4.1:+26894128 | MS.gene006641:CDS |
| ATTTGAACAAGCTTACCAGA+AGG | 0.622818 | 4.1:-26891016 | None:intergenic |
| CAATATTGACACTCAAGGAA+GGG | 0.636489 | 4.1:+26894133 | MS.gene006641:CDS |
| CTTGGAAAGCTTCTGCTATG+GGG | 0.641428 | 4.1:+26893858 | MS.gene006641:CDS |
| TGAGTGTCAATATTGCTGTG+TGG | 0.689041 | 4.1:-26894125 | None:intergenic |
| AGTTTGTCCAGAACCAACAG+CGG | 0.695714 | 4.1:-26891053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAAAAAAAAAAAAAA+AGG | - | chr4.1:26892926-26892945 | None:intergenic | 0.0% |
| !!! | TATGCAATATATATTTTTAA+TGG | + | chr4.1:26895726-26895745 | MS.gene006641:intron | 10.0% |
| !! | AAATAAATAAACACTGAAAA+GGG | - | chr4.1:26894822-26894841 | None:intergenic | 15.0% |
| !! | AAGTAATTTATAAATGTACT+TGG | + | chr4.1:26891811-26891830 | MS.gene006641:intron | 15.0% |
| !! | ACCGAAAAAATAAAATAAAA+GGG | - | chr4.1:26894665-26894684 | None:intergenic | 15.0% |
| !! | CTTATTAAAGAATTAATAGA+AGG | + | chr4.1:26891717-26891736 | MS.gene006641:intron | 15.0% |
| !! | TAAAATTGAAAAGTTAATGA+AGG | - | chr4.1:26893412-26893431 | None:intergenic | 15.0% |
| !! | TAAGTTAAAACATATTTGTA+TGG | + | chr4.1:26891324-26891343 | MS.gene006641:intron | 15.0% |
| !! | TACAAAGTATAAAAAGAAAA+CGG | - | chr4.1:26891938-26891957 | None:intergenic | 15.0% |
| !! | TATATTGTTTAAATGTTACT+TGG | + | chr4.1:26892311-26892330 | MS.gene006641:intron | 15.0% |
| !!! | AATTTGTTAATTATATTGCA+GGG | + | chr4.1:26895999-26896018 | MS.gene006641:intron | 15.0% |
| !!! | GAAATATGATATTTTCATTA+AGG | - | chr4.1:26894195-26894214 | None:intergenic | 15.0% |
| !!! | TAATTTGTTAATTATATTGC+AGG | + | chr4.1:26895998-26896017 | MS.gene006641:intron | 15.0% |
| !!! | TCCCTTTTATTTTATTTTTT+CGG | + | chr4.1:26894661-26894680 | MS.gene006641:intron | 15.0% |
| !!! | TTTCTTTTCTTAATTTTTGT+TGG | + | chr4.1:26895904-26895923 | MS.gene006641:intron | 15.0% |
| !! | AAAAAAAAAAAAAAGGACAC+AGG | - | chr4.1:26892919-26892938 | None:intergenic | 20.0% |
| !! | AAAAGCTATAAATAAGTTTG+AGG | + | chr4.1:26894921-26894940 | MS.gene006641:intron | 20.0% |
| !! | AAGAATTTCGCAATATAAAA+TGG | - | chr4.1:26892252-26892271 | None:intergenic | 20.0% |
| !! | CAAATAAATAAACACTGAAA+AGG | - | chr4.1:26894823-26894842 | None:intergenic | 20.0% |
| !! | CACCGAAAAAATAAAATAAA+AGG | - | chr4.1:26894666-26894685 | None:intergenic | 20.0% |
| !! | TAGCTAAATTAAATGTTTAG+TGG | + | chr4.1:26893093-26893112 | MS.gene006641:intron | 20.0% |
| !! | TGATACTTGAAAACAATTTA+AGG | - | chr4.1:26892109-26892128 | None:intergenic | 20.0% |
| !!! | ATGTTTTAACTTATTTGAAG+AGG | - | chr4.1:26891317-26891336 | None:intergenic | 20.0% |
| !!! | ATTAATGATGACAATGTTTT+AGG | + | chr4.1:26893931-26893950 | MS.gene006641:intron | 20.0% |
| !!! | CAAACTTATTTATAGCTTTT+AGG | - | chr4.1:26894921-26894940 | None:intergenic | 20.0% |
| !!! | CAATTTAAAACACTGAATTA+AGG | - | chr4.1:26894326-26894345 | None:intergenic | 20.0% |
| !!! | CTTAATTCAGTGTTTTAAAT+TGG | + | chr4.1:26894324-26894343 | MS.gene006641:intron | 20.0% |
| !!! | TTGCACTTAGAATTTTTTAA+AGG | + | chr4.1:26893741-26893760 | MS.gene006641:intron | 20.0% |
| !!! | TTTTCTTAATTTTTGTTGGT+GGG | + | chr4.1:26895908-26895927 | MS.gene006641:intron | 20.0% |
| !!! | TTTTTTTTAGTGAAGACAAT+AGG | - | chr4.1:26893024-26893043 | None:intergenic | 20.0% |
| ! | AAATAATCATCAATTTCAGC+TGG | - | chr4.1:26896033-26896052 | None:intergenic | 25.0% |
| ! | AACATAAAAACTGTCAATGA+AGG | - | chr4.1:26894570-26894589 | None:intergenic | 25.0% |
| ! | AATATTTGGTCAATATGACT+CGG | + | chr4.1:26892287-26892306 | MS.gene006641:intron | 25.0% |
| ! | AATGGAAGCTAATTAAAATC+AGG | + | chr4.1:26895744-26895763 | MS.gene006641:intron | 25.0% |
| ! | AATTGAAAAGTTAATGAAGG+AGG | - | chr4.1:26893409-26893428 | None:intergenic | 25.0% |
| ! | AATTGCTTAGATAAACATTG+TGG | + | chr4.1:26893274-26893293 | MS.gene006641:intron | 25.0% |
| ! | ACATAAAAACTGTCAATGAA+GGG | - | chr4.1:26894569-26894588 | None:intergenic | 25.0% |
| ! | ACATATATGGTAAAGTTCAA+CGG | - | chr4.1:26892766-26892785 | None:intergenic | 25.0% |
| ! | ATAAGCTATGAGTACATATA+TGG | - | chr4.1:26892779-26892798 | None:intergenic | 25.0% |
| ! | ATACCAAATGATAACAGAAA+AGG | - | chr4.1:26892535-26892554 | None:intergenic | 25.0% |
| ! | ATGAATTGATAGAGATATTG+AGG | - | chr4.1:26894045-26894064 | None:intergenic | 25.0% |
| ! | ATTTACCAAAAACTCAAAGT+TGG | - | chr4.1:26892879-26892898 | None:intergenic | 25.0% |
| ! | CCTCAACATTTAATGATAAT+CGG | - | chr4.1:26893137-26893156 | None:intergenic | 25.0% |
| ! | CGATTATCATTAAATGTTGA+GGG | + | chr4.1:26893135-26893154 | MS.gene006641:intron | 25.0% |
| ! | CTCAACATTTAATGATAATC+GGG | - | chr4.1:26893136-26893155 | None:intergenic | 25.0% |
| ! | GAAAGAAAAAAAATGCTCTA+AGG | - | chr4.1:26892494-26892513 | None:intergenic | 25.0% |
| ! | GGTTCAAATGAAAAAAATAG+AGG | + | chr4.1:26894378-26894397 | MS.gene006641:intron | 25.0% |
| ! | GTCATATACTAAAAGTTCAA+CGG | - | chr4.1:26892073-26892092 | None:intergenic | 25.0% |
| ! | TAATTACTGTATGTATAGAG+TGG | + | chr4.1:26891671-26891690 | MS.gene006641:intron | 25.0% |
| ! | TATTGTAAGCAAAAAATTGC+AGG | + | chr4.1:26892595-26892614 | MS.gene006641:intron | 25.0% |
| ! | TCAAAATCTTGAGAAATTGA+TGG | - | chr4.1:26891182-26891201 | None:intergenic | 25.0% |
| ! | TCAACATTTAATGATAATCG+GGG | - | chr4.1:26893135-26893154 | None:intergenic | 25.0% |
| ! | TCAGCAAAAAACATTGAAAT+AGG | + | chr4.1:26894710-26894729 | MS.gene006641:CDS | 25.0% |
| ! | TCTAAACTATAAAACAAACC+AGG | - | chr4.1:26895612-26895631 | None:intergenic | 25.0% |
| ! | TGAGCTAAAAATTATGCTAT+CGG | + | chr4.1:26894879-26894898 | MS.gene006641:intron | 25.0% |
| ! | TGTGTGTAAAAATAAGTAAG+AGG | - | chr4.1:26893361-26893380 | None:intergenic | 25.0% |
| !! | AGCTGAAATTGATGATTATT+TGG | + | chr4.1:26896032-26896051 | MS.gene006641:CDS | 25.0% |
| !! | ATAAATAAGTTTGAGGCATT+CGG | + | chr4.1:26894928-26894947 | MS.gene006641:intron | 25.0% |
| !! | CAGCTTATGATAATTTTAGA+GGG | - | chr4.1:26894470-26894489 | None:intergenic | 25.0% |
| !! | CATCTTTTGTTAAAAATAGC+AGG | + | chr4.1:26892564-26892583 | MS.gene006641:intron | 25.0% |
| !! | CTTTTCTTAATTTTTGTTGG+TGG | + | chr4.1:26895907-26895926 | MS.gene006641:intron | 25.0% |
| !! | GCTGAAATTGATGATTATTT+GGG | + | chr4.1:26896033-26896052 | MS.gene006641:CDS | 25.0% |
| !! | GTGTTAATAACTGAATTTTC+TGG | - | chr4.1:26891257-26891276 | None:intergenic | 25.0% |
| !! | TCAGCTTATGATAATTTTAG+AGG | - | chr4.1:26894471-26894490 | None:intergenic | 25.0% |
| !! | TTTCATTCTTAGAGTTGATT+AGG | + | chr4.1:26894211-26894230 | MS.gene006641:intron | 25.0% |
| !! | TTTCTTAATTTTTGTTGGTG+GGG | + | chr4.1:26895909-26895928 | MS.gene006641:intron | 25.0% |
| !!! | AGAAAATTGAAGGTTGTTTT+TGG | + | chr4.1:26893789-26893808 | MS.gene006641:intron | 25.0% |
| !!! | ATGTCATTGATTTCAAAACA+TGG | - | chr4.1:26895685-26895704 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTGTCCTGATAG+TGG | + | chr4.1:26893434-26893453 | MS.gene006641:intron | 25.0% |
| !!! | TGTTGAATCTTTTTTAGTGA+GGG | - | chr4.1:26892965-26892984 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTACCAATGCAAA+TGG | + | chr4.1:26895849-26895868 | MS.gene006641:intron | 25.0% |
| AAAAAAAAAAAGGACACAGG+TGG | - | chr4.1:26892916-26892935 | None:intergenic | 30.0% | |
| AACATTGAAATAGGCATCAT+TGG | + | chr4.1:26894719-26894738 | MS.gene006641:CDS | 30.0% | |
| AACGGTTATGATGTTATCAT+AGG | - | chr4.1:26891588-26891607 | None:intergenic | 30.0% | |
| AAGTTTCAACAGAGTAAATC+AGG | - | chr4.1:26892017-26892036 | None:intergenic | 30.0% | |
| AATAGAGGCTAATGTTATCT+AGG | + | chr4.1:26894393-26894412 | MS.gene006641:intron | 30.0% | |
| ACAAATTAAGTTACCGAATC+CGG | - | chr4.1:26895986-26896005 | None:intergenic | 30.0% | |
| ACAATAGGTTTCATGTTGAT+TGG | - | chr4.1:26893009-26893028 | None:intergenic | 30.0% | |
| ACATTGTAAACTGTTAGCAT+TGG | + | chr4.1:26891761-26891780 | MS.gene006641:intron | 30.0% | |
| ACGGTTATGATGTTATCATA+GGG | - | chr4.1:26891587-26891606 | None:intergenic | 30.0% | |
| AGCTACTCAAATGAAGATAA+TGG | + | chr4.1:26894981-26895000 | MS.gene006641:intron | 30.0% | |
| AGGAGGAAAATAGAAGAAAA+AGG | - | chr4.1:26893392-26893411 | None:intergenic | 30.0% | |
| AGTTCAATAGTCAACATTTC+TGG | - | chr4.1:26892721-26892740 | None:intergenic | 30.0% | |
| ATAAACATTGTGGTTCCTAT+TGG | + | chr4.1:26893284-26893303 | MS.gene006641:intron | 30.0% | |
| ATAGAGGCTAATGTTATCTA+GGG | + | chr4.1:26894394-26894413 | MS.gene006641:intron | 30.0% | |
| CAAGAAAAATATGAACCTGA+TGG | - | chr4.1:26893842-26893861 | None:intergenic | 30.0% | |
| CAGACAAGAAAAAAGAAAAG+AGG | - | chr4.1:26894601-26894620 | None:intergenic | 30.0% | |
| CAGTTATTAACACCAAACAT+AGG | + | chr4.1:26891264-26891283 | MS.gene006641:CDS | 30.0% | |
| CATTCATCAAGTACTTATGA+TGG | - | chr4.1:26891543-26891562 | None:intergenic | 30.0% | |
| CCGATTATCATTAAATGTTG+AGG | + | chr4.1:26893134-26893153 | MS.gene006641:intron | 30.0% | |
| CGATTAATGTCTATCAGATT+TGG | - | chr4.1:26893072-26893091 | None:intergenic | 30.0% | |
| CTTCATCAACCAATATAGAT+GGG | - | chr4.1:26891132-26891151 | None:intergenic | 30.0% | |
| GAGTCATATTGACCAAATAT+TGG | - | chr4.1:26892288-26892307 | None:intergenic | 30.0% | |
| GGTAGTGTACTTTATATAGT+CGG | - | chr4.1:26892231-26892250 | None:intergenic | 30.0% | |
| GGTTCATTATGAATTCCAAT+AGG | - | chr4.1:26893302-26893321 | None:intergenic | 30.0% | |
| GTTTGTCAAACAATGAAATG+TGG | - | chr4.1:26895778-26895797 | None:intergenic | 30.0% | |
| TAACAGAGAATTCTATCCAA+AGG | + | chr4.1:26891495-26891514 | MS.gene006641:intron | 30.0% | |
| TATTTGAACCTTGTATCATC+TGG | + | chr4.1:26894837-26894856 | MS.gene006641:intron | 30.0% | |
| TGATGAGAAACAAGAACATT+TGG | - | chr4.1:26895662-26895681 | None:intergenic | 30.0% | |
| TTATCTTCATTTGAGTAGCT+AGG | - | chr4.1:26894981-26895000 | None:intergenic | 30.0% | |
| TTGTGCCCTAAAATATACTT+TGG | + | chr4.1:26894770-26894789 | MS.gene006641:intron | 30.0% | |
| ! | AGCATTGGAATAGTGTAAAA+TGG | + | chr4.1:26891776-26891795 | MS.gene006641:intron | 30.0% |
| ! | AGTCTGCCAAAGTATATTTT+AGG | - | chr4.1:26894779-26894798 | None:intergenic | 30.0% |
| ! | CATCAGGTTCATATTTTTCT+TGG | + | chr4.1:26893840-26893859 | MS.gene006641:CDS | 30.0% |
| ! | CTCTTTTGTCATATGATTTC+AGG | + | chr4.1:26891230-26891249 | MS.gene006641:intron | 30.0% |
| ! | GAACTTTTAGTATATGACAG+AGG | + | chr4.1:26892075-26892094 | MS.gene006641:intron | 30.0% |
| ! | GTCTGCCAAAGTATATTTTA+GGG | - | chr4.1:26894778-26894797 | None:intergenic | 30.0% |
| ! | TAAATAAGTTTGAGGCATTC+GGG | + | chr4.1:26894929-26894948 | MS.gene006641:intron | 30.0% |
| ! | TAATGGACCACAATTATATC+AGG | + | chr4.1:26893502-26893521 | MS.gene006641:CDS | 30.0% |
| ! | TGCTACTTACAAAATGCATT+GGG | - | chr4.1:26895882-26895901 | None:intergenic | 30.0% |
| ! | TTGCCTTTTCTGTTATCATT+TGG | + | chr4.1:26892529-26892548 | MS.gene006641:intron | 30.0% |
| ! | TTGCTACTTACAAAATGCAT+TGG | - | chr4.1:26895883-26895902 | None:intergenic | 30.0% |
| !! | CAATGTTTTAGGCAAATATG+TGG | + | chr4.1:26893942-26893961 | MS.gene006641:intron | 30.0% |
| !! | TACTCTATTTTAGACAAACC+TGG | + | chr4.1:26895591-26895610 | MS.gene006641:intron | 30.0% |
| !! | TAGCTTTTAGGTATTCAGAT+TGG | - | chr4.1:26894909-26894928 | None:intergenic | 30.0% |
| !! | TCAGTGTTTTAAATTGGAGA+AGG | + | chr4.1:26894330-26894349 | MS.gene006641:intron | 30.0% |
| !!! | AAGTTTTTTGTTTTGAACGC+CGG | + | chr4.1:26895964-26895983 | MS.gene006641:intron | 30.0% |
| !!! | ATTTTGTCTTTGTTGTTCAG+TGG | + | chr4.1:26892145-26892164 | MS.gene006641:intron | 30.0% |
| !!! | CTCTCTATCTTTCCTTTTTT+TGG | - | chr4.1:26892824-26892843 | None:intergenic | 30.0% |
| !!! | CTGTTGAATCTTTTTTAGTG+AGG | - | chr4.1:26892966-26892985 | None:intergenic | 30.0% |
| !!! | CTTGTTTTACATTCGTATCA+TGG | + | chr4.1:26895007-26895026 | MS.gene006641:intron | 30.0% |
| !!! | GGAGCAACATTTTGATTAAA+CGG | - | chr4.1:26894279-26894298 | None:intergenic | 30.0% |
| !!! | GTTGAATCTTTTTTAGTGAG+GGG | - | chr4.1:26892964-26892983 | None:intergenic | 30.0% |
| !!! | TCTATCTTTCCTTTTTTTGG+AGG | - | chr4.1:26892821-26892840 | None:intergenic | 30.0% |
| !!! | TTATTTTTTCGGTGTTTTCC+AGG | + | chr4.1:26894672-26894691 | MS.gene006641:intron | 30.0% |
| !!! | TTGAATCTTTTTTAGTGAGG+GGG | - | chr4.1:26892963-26892982 | None:intergenic | 30.0% |
| AAATTAGGCAAGTGGGAATT+AGG | + | chr4.1:26895471-26895490 | MS.gene006641:intron | 35.0% | |
| AATTAGGCAAGTGGGAATTA+GGG | + | chr4.1:26895472-26895491 | MS.gene006641:intron | 35.0% | |
| ACAACCAAAATTAGGCAAGT+GGG | + | chr4.1:26895464-26895483 | MS.gene006641:intron | 35.0% | |
| ACGGTCAAAACATTTCTGAA+AGG | - | chr4.1:26892747-26892766 | None:intergenic | 35.0% | |
| ACTAACTTCAACCCACATAA+TGG | - | chr4.1:26894003-26894022 | None:intergenic | 35.0% | |
| ATCATCAAGCTCCATATCAT+CGG | - | chr4.1:26894100-26894119 | None:intergenic | 35.0% | |
| ATGATAACAGAAAAGGCAAC+AGG | - | chr4.1:26892528-26892547 | None:intergenic | 35.0% | |
| ATGCCATTGAAGTTTCTGTT+GGG | + | chr4.1:26891409-26891428 | MS.gene006641:intron | 35.0% | |
| ATTTGAACAAGCTTACCAGA+AGG | - | chr4.1:26891019-26891038 | None:intergenic | 35.0% | |
| CAATATTGACACTCAAGGAA+GGG | + | chr4.1:26894133-26894152 | MS.gene006641:CDS | 35.0% | |
| CACTTGTGACAACCAAAATT+AGG | + | chr4.1:26895456-26895475 | MS.gene006641:intron | 35.0% | |
| CGGTTATGATGTTATCATAG+GGG | - | chr4.1:26891586-26891605 | None:intergenic | 35.0% | |
| CTAAGACATTTCTTGAGAAG+AGG | + | chr4.1:26893897-26893916 | MS.gene006641:CDS | 35.0% | |
| CTGAGTAAATTCCTGCATAA+CGG | - | chr4.1:26892660-26892679 | None:intergenic | 35.0% | |
| CTGATTGCTTGGAATGAATT+AGG | + | chr4.1:26892372-26892391 | MS.gene006641:intron | 35.0% | |
| CTGTATACAACACCTATGTT+TGG | - | chr4.1:26891279-26891298 | None:intergenic | 35.0% | |
| GAAAGAAACCAGATGATACA+AGG | - | chr4.1:26894848-26894867 | None:intergenic | 35.0% | |
| GAAGAAACTCCCATCTATAT+TGG | + | chr4.1:26891120-26891139 | MS.gene006641:CDS | 35.0% | |
| GAATAGGAAGAACTACATAC+AGG | - | chr4.1:26892344-26892363 | None:intergenic | 35.0% | |
| GACCACAATTATATCAGGTA+TGG | + | chr4.1:26893507-26893526 | MS.gene006641:intron | 35.0% | |
| GAGAAAGAGGAGAAAATTGA+AGG | + | chr4.1:26893779-26893798 | MS.gene006641:intron | 35.0% | |
| GCAATCAGAAATGAAGGAAT+AGG | - | chr4.1:26892360-26892379 | None:intergenic | 35.0% | |
| GCTTCATCAACCAATATAGA+TGG | - | chr4.1:26891133-26891152 | None:intergenic | 35.0% | |
| GTATAGAGTGGAAATAGATG+TGG | + | chr4.1:26891683-26891702 | MS.gene006641:intron | 35.0% | |
| GTGAAAACCACAACTGAATA+TGG | - | chr4.1:26895055-26895074 | None:intergenic | 35.0% | |
| GTGATCTTGACATTTACCAA+AGG | + | chr4.1:26894439-26894458 | MS.gene006641:intron | 35.0% | |
| TACCTAGAATTGGACAATCA+AGG | - | chr4.1:26894075-26894094 | None:intergenic | 35.0% | |
| TACTAAAAGTTCAACGGCAA+TGG | - | chr4.1:26892067-26892086 | None:intergenic | 35.0% | |
| TCTAGACAGTATTCACTCAT+TGG | + | chr4.1:26893551-26893570 | MS.gene006641:intron | 35.0% | |
| TGCATGCAGATTAGATTTAG+AGG | - | chr4.1:26893323-26893342 | None:intergenic | 35.0% | |
| TGCCATACCTGATATAATTG+TGG | - | chr4.1:26893512-26893531 | None:intergenic | 35.0% | |
| TGTGTTTGATGAGTTCATAC+TGG | + | chr4.1:26893706-26893725 | MS.gene006641:intron | 35.0% | |
| TTCCAAGCAATCAGAAATGA+AGG | - | chr4.1:26892366-26892385 | None:intergenic | 35.0% | |
| TTCCTTCATTTCTGATTGCT+TGG | + | chr4.1:26892361-26892380 | MS.gene006641:intron | 35.0% | |
| TTCCTTGATTGTCCAATTCT+AGG | + | chr4.1:26894070-26894089 | MS.gene006641:intron | 35.0% | |
| TTCGAAATGCCTCAAATTTC+AGG | - | chr4.1:26893189-26893208 | None:intergenic | 35.0% | |
| ! | AACAAAGTGCCTGAAATTTG+AGG | + | chr4.1:26893177-26893196 | MS.gene006641:intron | 35.0% |
| ! | AAGCTGACTTTATGTTAGCA+GGG | + | chr4.1:26894484-26894503 | MS.gene006641:intron | 35.0% |
| ! | AAGGAAAGTTCGTCTAAGAT+TGG | + | chr4.1:26894349-26894368 | MS.gene006641:intron | 35.0% |
| ! | AATTCCCACTTGCCTAATTT+TGG | - | chr4.1:26895471-26895490 | None:intergenic | 35.0% |
| ! | ACACATTTCCTTTTCGAACA+TGG | + | chr4.1:26892395-26892414 | MS.gene006641:intron | 35.0% |
| ! | AGGTTGATCTATCTAGGAAA+CGG | - | chr4.1:26891606-26891625 | None:intergenic | 35.0% |
| ! | CAAACATAGGTGTTGTATAC+AGG | + | chr4.1:26891277-26891296 | MS.gene006641:CDS | 35.0% |
| ! | CACATTTCCTTTTCGAACAT+GGG | + | chr4.1:26892396-26892415 | MS.gene006641:intron | 35.0% |
| ! | CATGAGTTAGTTTCATGCAA+CGG | + | chr4.1:26893241-26893260 | MS.gene006641:intron | 35.0% |
| ! | CATTCTTAGAGTTGATTAGG+AGG | + | chr4.1:26894214-26894233 | MS.gene006641:intron | 35.0% |
| ! | CTTACAACTTTTAGTCCTTC+TGG | + | chr4.1:26891001-26891020 | MS.gene006641:CDS | 35.0% |
| ! | TAAGCTGACTTTATGTTAGC+AGG | + | chr4.1:26894483-26894502 | MS.gene006641:intron | 35.0% |
| ! | TAATGATAATCGGGGTGTTA+TGG | - | chr4.1:26893127-26893146 | None:intergenic | 35.0% |
| ! | TATGATGGTTTGTAAACGCA+AGG | - | chr4.1:26891528-26891547 | None:intergenic | 35.0% |
| ! | TCAAGTCAAGGTATCTAGAA+GGG | - | chr4.1:26895307-26895326 | None:intergenic | 35.0% |
| !! | AAGGGATTAGTTTCAAAGAC+TGG | - | chr4.1:26894647-26894666 | None:intergenic | 35.0% |
| !! | CAATTTGTATTTGCTGTAGG+TGG | + | chr4.1:26893814-26893833 | MS.gene006641:intron | 35.0% |
| !! | GTGCAATTTGTATTTGCTGT+AGG | + | chr4.1:26893811-26893830 | MS.gene006641:intron | 35.0% |
| !!! | TGCTTTTTCGAACCAATACT+CGG | - | chr4.1:26892186-26892205 | None:intergenic | 35.0% |
| ACAAGTAGAGACACTCCAAA+TGG | - | chr4.1:26893467-26893486 | None:intergenic | 40.0% | |
| ACTGCAGTGTTTAGAGAAAG+AGG | + | chr4.1:26893766-26893785 | MS.gene006641:intron | 40.0% | |
| AGTCAGACCATATTCAGTTG+TGG | + | chr4.1:26895045-26895064 | MS.gene006641:intron | 40.0% | |
| ATAGGGGAGAATCAGTTTAG+GGG | - | chr4.1:26891570-26891589 | None:intergenic | 40.0% | |
| ATCAAAATGTTGCTCCCTCT+CGG | + | chr4.1:26894283-26894302 | MS.gene006641:intron | 40.0% | |
| ATCATCGGTGTACCTAGAAT+TGG | - | chr4.1:26894085-26894104 | None:intergenic | 40.0% | |
| ATGCAGGAATTTACTCAGTC+TGG | + | chr4.1:26892662-26892681 | MS.gene006641:CDS | 40.0% | |
| CAACAGTAGTAGTCAAGTCA+AGG | - | chr4.1:26895319-26895338 | None:intergenic | 40.0% | |
| CAACTGAATATGGTCTGACT+TGG | - | chr4.1:26895045-26895064 | None:intergenic | 40.0% | |
| CACAGCAATATTGACACTCA+AGG | + | chr4.1:26894128-26894147 | MS.gene006641:CDS | 40.0% | |
| CACTCAGAATTCATCTCACA+AGG | - | chr4.1:26892444-26892463 | None:intergenic | 40.0% | |
| CATAGGGGAGAATCAGTTTA+GGG | - | chr4.1:26891571-26891590 | None:intergenic | 40.0% | |
| CATATATGCATGTGAGCATG+AGG | + | chr4.1:26891836-26891855 | MS.gene006641:intron | 40.0% | |
| CCAAGACAGTATTCACTCAT+TGG | + | chr4.1:26893659-26893678 | MS.gene006641:intron | 40.0% | |
| CCAATGAGTGAATACTGTCT+TGG | - | chr4.1:26893554-26893573 | None:intergenic | 40.0% | |
| CGGATTTAATGACTGTAGAG+AGG | - | chr4.1:26895358-26895377 | None:intergenic | 40.0% | |
| CTAAGATCCCATGTTCGAAA+AGG | - | chr4.1:26892406-26892425 | None:intergenic | 40.0% | |
| CTATCATACACTATCCGAGA+GGG | - | chr4.1:26894300-26894319 | None:intergenic | 40.0% | |
| CTTCCTGTTCTGCCAATATT+TGG | + | chr4.1:26892273-26892292 | MS.gene006641:intron | 40.0% | |
| GACAACCAAAATTAGGCAAG+TGG | + | chr4.1:26895463-26895482 | MS.gene006641:intron | 40.0% | |
| GATGCCATTGAAGTTTCTGT+TGG | + | chr4.1:26891408-26891427 | MS.gene006641:intron | 40.0% | |
| GCAAGTGGAGGAATATTATG+TGG | - | chr4.1:26895132-26895151 | None:intergenic | 40.0% | |
| GCAATATTGACACTCAAGGA+AGG | + | chr4.1:26894132-26894151 | MS.gene006641:CDS | 40.0% | |
| GGAAGTGACTCAACTTAGTT+GGG | + | chr4.1:26891629-26891648 | MS.gene006641:intron | 40.0% | |
| GGGAAGTTATCCATTTGCAT+TGG | - | chr4.1:26895862-26895881 | None:intergenic | 40.0% | |
| GGTTCGAAAAAGCAGAAAAC+AGG | + | chr4.1:26892192-26892211 | MS.gene006641:CDS | 40.0% | |
| GTGAGATGAATTCTGAGTGT+TGG | + | chr4.1:26892445-26892464 | MS.gene006641:intron | 40.0% | |
| GTTCCCAACAGAAACTTCAA+TGG | - | chr4.1:26891415-26891434 | None:intergenic | 40.0% | |
| GTTTAGTGCAACTTTGCAAG+TGG | - | chr4.1:26895147-26895166 | None:intergenic | 40.0% | |
| TATGCCACTCCTCCAAAAAA+AGG | + | chr4.1:26892809-26892828 | MS.gene006641:intron | 40.0% | |
| TCAACGGCAATGGAAAAAGT+AGG | - | chr4.1:26892057-26892076 | None:intergenic | 40.0% | |
| TCATAGGGGAGAATCAGTTT+AGG | - | chr4.1:26891572-26891591 | None:intergenic | 40.0% | |
| TCCTAGATAGATCAACCTGA+GGG | + | chr4.1:26891608-26891627 | MS.gene006641:intron | 40.0% | |
| TCTTGGAAAGCTTCTGCTAT+GGG | + | chr4.1:26893857-26893876 | MS.gene006641:CDS | 40.0% | |
| TGAAGTTTCTGTTGGGAACT+TGG | + | chr4.1:26891416-26891435 | MS.gene006641:intron | 40.0% | |
| TGACCAAATATTGGCAGAAC+AGG | - | chr4.1:26892279-26892298 | None:intergenic | 40.0% | |
| TGAGTGTCAATATTGCTGTG+TGG | - | chr4.1:26894128-26894147 | None:intergenic | 40.0% | |
| TGCAGGAATTTACTCAGTCT+GGG | + | chr4.1:26892663-26892682 | MS.gene006641:CDS | 40.0% | |
| TGGCAACAATAGTTGACTGT+CGG | - | chr4.1:26895112-26895131 | None:intergenic | 40.0% | |
| TTCCTAGATAGATCAACCTG+AGG | + | chr4.1:26891607-26891626 | MS.gene006641:intron | 40.0% | |
| TTCTAGGTACACCGATGATA+TGG | + | chr4.1:26894086-26894105 | MS.gene006641:intron | 40.0% | |
| TTCTTGGAAAGCTTCTGCTA+TGG | + | chr4.1:26893856-26893875 | MS.gene006641:CDS | 40.0% | |
| TTGGTGCAGACAAAAAGTTC+AGG | + | chr4.1:26894738-26894757 | MS.gene006641:CDS | 40.0% | |
| ! | ATGGTTTGTAAACGCAAGGA+GGG | - | chr4.1:26891524-26891543 | None:intergenic | 40.0% |
| ! | GTCAAGTCAAGGTATCTAGA+AGG | - | chr4.1:26895308-26895327 | None:intergenic | 40.0% |
| ! | GTTAGTTTCATGCAACGGTT+CGG | + | chr4.1:26893246-26893265 | MS.gene006641:intron | 40.0% |
| ! | GTTGCTGGGTTTGATGATAA+TGG | + | chr4.1:26893485-26893504 | MS.gene006641:CDS | 40.0% |
| !! | AATGACTGTAGAGAGGTGTT+TGG | - | chr4.1:26895351-26895370 | None:intergenic | 40.0% |
| !! | ATTTTAGAGGGACATGCCTT+TGG | - | chr4.1:26894458-26894477 | None:intergenic | 40.0% |
| !! | CCAAAAACTCAAAGTTGGTG+AGG | - | chr4.1:26892874-26892893 | None:intergenic | 40.0% |
| !! | CCTCACCAACTTTGAGTTTT+TGG | + | chr4.1:26892871-26892890 | MS.gene006641:intron | 40.0% |
| !! | CTTAATTTTTGTTGGTGGGG+TGG | + | chr4.1:26895912-26895931 | MS.gene006641:intron | 40.0% |
| !! | TCTTTGTTGTTCAGTGGCAT+GGG | + | chr4.1:26892151-26892170 | MS.gene006641:intron | 40.0% |
| !! | TTCGTCTAAGATTGGCTTCT+TGG | + | chr4.1:26894357-26894376 | MS.gene006641:intron | 40.0% |
| !! | TTTTTAGTGAGGGGGTGATA+AGG | - | chr4.1:26892955-26892974 | None:intergenic | 40.0% |
| !!! | CTTTCCTTTTTTTGGAGGAG+TGG | - | chr4.1:26892816-26892835 | None:intergenic | 40.0% |
| !!! | TTTGTTTTGAACGCCGGATT+CGG | + | chr4.1:26895970-26895989 | MS.gene006641:intron | 40.0% |
| AGTATGTCACATGGTGACAG+TGG | - | chr4.1:26895175-26895194 | None:intergenic | 45.0% | |
| AGTTTGTCCAGAACCAACAG+CGG | - | chr4.1:26891056-26891075 | None:intergenic | 45.0% | |
| ATATGCATGTGAGCATGAGG+TGG | + | chr4.1:26891839-26891858 | MS.gene006641:intron | 45.0% | |
| ATTGACACTCAAGGAAGGGT+AGG | + | chr4.1:26894137-26894156 | MS.gene006641:intron | 45.0% | |
| CCAAGACAGTATTCGCTCAT+TGG | + | chr4.1:26893605-26893624 | MS.gene006641:intron | 45.0% | |
| CCAATGAGCGAATACTGTCT+TGG | - | chr4.1:26893608-26893627 | None:intergenic | 45.0% | |
| CCCTGTCACTCAACTTGTAA+GGG | + | chr4.1:26892625-26892644 | MS.gene006641:CDS | 45.0% | |
| CGAACCAATACTCGGAAATC+AGG | - | chr4.1:26892178-26892197 | None:intergenic | 45.0% | |
| CTCGGTATCAAAGCTGCAAA+TGG | + | chr4.1:26891079-26891098 | MS.gene006641:CDS | 45.0% | |
| CTGCATGCAGTGAACTTAGT+TGG | + | chr4.1:26893334-26893353 | MS.gene006641:intron | 45.0% | |
| CTTGGAAAGCTTCTGCTATG+GGG | + | chr4.1:26893858-26893877 | MS.gene006641:CDS | 45.0% | |
| GCTATCATACACTATCCGAG+AGG | - | chr4.1:26894301-26894320 | None:intergenic | 45.0% | |
| GGCAACAATAGTTGACTGTC+GGG | - | chr4.1:26895111-26895130 | None:intergenic | 45.0% | |
| GGGAAGTGACTCAACTTAGT+TGG | + | chr4.1:26891628-26891647 | MS.gene006641:intron | 45.0% | |
| TAGTGCAACTTTGCAAGTGG+AGG | - | chr4.1:26895144-26895163 | None:intergenic | 45.0% | |
| TCCCTGTCACTCAACTTGTA+AGG | + | chr4.1:26892624-26892643 | MS.gene006641:CDS | 45.0% | |
| ! | AAGGTATCTAGAAGGGCAGT+CGG | - | chr4.1:26895300-26895319 | None:intergenic | 45.0% |
| ! | ACAAGTTGAGTGACAGGGAT+TGG | - | chr4.1:26892623-26892642 | None:intergenic | 45.0% |
| ! | CCCTTACAAGTTGAGTGACA+GGG | - | chr4.1:26892628-26892647 | None:intergenic | 45.0% |
| ! | GAGTGTCTCTACTTGTTGCT+GGG | + | chr4.1:26893471-26893490 | MS.gene006641:CDS | 45.0% |
| ! | GATGGTTTGTAAACGCAAGG+AGG | - | chr4.1:26891525-26891544 | None:intergenic | 45.0% |
| ! | TAAGTTGAGTCACTTCCCTC+AGG | - | chr4.1:26891626-26891645 | None:intergenic | 45.0% |
| ! | TCCCTTACAAGTTGAGTGAC+AGG | - | chr4.1:26892629-26892648 | None:intergenic | 45.0% |
| !! | AACCCACATAATGGACACAG+CGG | - | chr4.1:26893994-26894013 | None:intergenic | 45.0% |
| !! | AAGATGGAGGGGTGTTACAA+TGG | - | chr4.1:26895224-26895243 | None:intergenic | 45.0% |
| !! | AGATGGAGGGGTGTTACAAT+GGG | - | chr4.1:26895223-26895242 | None:intergenic | 45.0% |
| !! | GGGCTTCAAGCTTGTTAGAT+TGG | + | chr4.1:26894504-26894523 | MS.gene006641:intron | 45.0% |
| !! | GGTTCTGGACAAACTTCTCT+CGG | + | chr4.1:26891061-26891080 | MS.gene006641:CDS | 45.0% |
| !! | GTCTTTGTTGTTCAGTGGCA+TGG | + | chr4.1:26892150-26892169 | MS.gene006641:intron | 45.0% |
| !! | TCCCTCAGGTTGATCTATCT+AGG | - | chr4.1:26891612-26891631 | None:intergenic | 45.0% |
| !! | TCGGTGTTTTCCAGGTTTGA+GGG | + | chr4.1:26894680-26894699 | MS.gene006641:intron | 45.0% |
| !! | TTTGTCCTGATAGTGGTGTC+CGG | + | chr4.1:26893441-26893460 | MS.gene006641:intron | 45.0% |
| !! | TTTTGGTTGTCACAAGTGCC+TGG | - | chr4.1:26895454-26895473 | None:intergenic | 45.0% |
| !!! | TTCGGTGTTTTCCAGGTTTG+AGG | + | chr4.1:26894679-26894698 | MS.gene006641:intron | 45.0% |
| AACGCAAGGAGGGAAACCTT+TGG | - | chr4.1:26891514-26891533 | None:intergenic | 50.0% | |
| ATGTCACATGGTGACAGTGG+AGG | - | chr4.1:26895172-26895191 | None:intergenic | 50.0% | |
| CACGAGTGACGACAATGGAA+AGG | - | chr4.1:26895415-26895434 | None:intergenic | 50.0% | |
| CCAGCAGCAATGATTGTGGA+CGG | - | chr4.1:26895378-26895397 | None:intergenic | 50.0% | |
| CGACGATGGAGTATGTCACA+TGG | - | chr4.1:26895184-26895203 | None:intergenic | 50.0% | |
| GAGCATGCTTTAACCGCTGT+TGG | + | chr4.1:26891040-26891059 | MS.gene006641:CDS | 50.0% | |
| GAGTGACGACAATGGAAAGG+TGG | - | chr4.1:26895412-26895431 | None:intergenic | 50.0% | |
| GGGTCCTGATTTCCGAGTAT+TGG | + | chr4.1:26892171-26892190 | MS.gene006641:CDS | 50.0% | |
| GTACTTGACAGCAGAGAGAG+TGG | - | chr4.1:26895253-26895272 | None:intergenic | 50.0% | |
| GTAGAGACACTCCAAATGGC+CGG | - | chr4.1:26893463-26893482 | None:intergenic | 50.0% | |
| GTCCGCTGTGTCCATTATGT+GGG | + | chr4.1:26893989-26894008 | MS.gene006641:intron | 50.0% | |
| GTGGGAATTAGGGTGGAAAG+AGG | + | chr4.1:26895482-26895501 | MS.gene006641:intron | 50.0% | |
| TAGGCAAGTGGGAATTAGGG+TGG | + | chr4.1:26895475-26895494 | MS.gene006641:intron | 50.0% | |
| TGTCACATGGTGACAGTGGA+GGG | - | chr4.1:26895171-26895190 | None:intergenic | 50.0% | |
| TGTCCGCTGTGTCCATTATG+TGG | + | chr4.1:26893988-26894007 | MS.gene006641:intron | 50.0% | |
| TTGACAGCAGAGAGAGTGGT+GGG | - | chr4.1:26895249-26895268 | None:intergenic | 50.0% | |
| TTGCTGTAGGTGGATCCATC+AGG | + | chr4.1:26893824-26893843 | MS.gene006641:intron | 50.0% | |
| ! | AGTGTTGAGCAAGGATGGAG+AGG | - | chr4.1:26895275-26895294 | None:intergenic | 50.0% |
| ! | AGTTTGAGGCATTCGGGTAG+CGG | + | chr4.1:26894935-26894954 | MS.gene006641:intron | 50.0% |
| ! | CGGTGTTTTCCAGGTTTGAG+GGG | + | chr4.1:26894681-26894700 | MS.gene006641:intron | 50.0% |
| ! | GGAGTGTCTCTACTTGTTGC+TGG | + | chr4.1:26893470-26893489 | MS.gene006641:CDS | 50.0% |
| ! | TTTGTTGGTGGGGTGGCATT+GGG | + | chr4.1:26895919-26895938 | MS.gene006641:intron | 50.0% |
| !! | AGAGAGGTGTTTGGTGGTGA+TGG | - | chr4.1:26895342-26895361 | None:intergenic | 50.0% |
| !! | ATGGAGGGGTGTTACAATGG+GGG | - | chr4.1:26895221-26895240 | None:intergenic | 50.0% |
| !! | GACTGTAGAGAGGTGTTTGG+TGG | - | chr4.1:26895348-26895367 | None:intergenic | 50.0% |
| !! | GATGGAGGGGTGTTACAATG+GGG | - | chr4.1:26895222-26895241 | None:intergenic | 50.0% |
| !! | GCTTTAACCGCTGTTGGTTC+TGG | + | chr4.1:26891046-26891065 | MS.gene006641:CDS | 50.0% |
| !! | TTTTGTTGGTGGGGTGGCAT+TGG | + | chr4.1:26895918-26895937 | MS.gene006641:intron | 50.0% |
| AATGGCCGGACACCACTATC+AGG | - | chr4.1:26893449-26893468 | None:intergenic | 55.0% | |
| AGGGTCACGAGTGACGACAA+TGG | - | chr4.1:26895420-26895439 | None:intergenic | 55.0% | |
| AGGGTGGAAAGAGGAGACTC+AGG | + | chr4.1:26895491-26895510 | MS.gene006641:intron | 55.0% | |
| ATACCACACGCTGACGACGA+TGG | - | chr4.1:26895198-26895217 | None:intergenic | 55.0% | |
| CCGTCCACAATCATTGCTGC+TGG | + | chr4.1:26895375-26895394 | MS.gene006641:intron | 55.0% | |
| CTTGACAGCAGAGAGAGTGG+TGG | - | chr4.1:26895250-26895269 | None:intergenic | 55.0% | |
| GGAAGTTGCTGCCGTTATGC+AGG | + | chr4.1:26892646-26892665 | MS.gene006641:CDS | 55.0% | |
| TCACAAGTGCCTGGTGGCAA+TGG | - | chr4.1:26895445-26895464 | None:intergenic | 55.0% | |
| TGAGATCTGCCCCTCAAACC+TGG | - | chr4.1:26894693-26894712 | None:intergenic | 55.0% | |
| TGCGCCAGCAGCAATGATTG+TGG | - | chr4.1:26895382-26895401 | None:intergenic | 55.0% | |
| TGGTTGTCACAAGTGCCTGG+TGG | - | chr4.1:26895451-26895470 | None:intergenic | 55.0% | |
| ! | AGAGTGGTGGGAGAAGATGG+AGG | - | chr4.1:26895237-26895256 | None:intergenic | 55.0% |
| ! | AGTGGTGGGAGAAGATGGAG+GGG | - | chr4.1:26895235-26895254 | None:intergenic | 55.0% |
| ! | GAGAGAGTGGTGGGAGAAGA+TGG | - | chr4.1:26895240-26895259 | None:intergenic | 55.0% |
| ! | GAGTGGTGGGAGAAGATGGA+GGG | - | chr4.1:26895236-26895255 | None:intergenic | 55.0% |
| ! | GATAGTGGTGTCCGGCCATT+TGG | + | chr4.1:26893449-26893468 | MS.gene006641:intron | 55.0% |
| ! | GTTTGAGGCATTCGGGTAGC+GGG | + | chr4.1:26894936-26894955 | MS.gene006641:intron | 55.0% |
| ! | TTGTTGGTGGGGTGGCATTG+GGG | + | chr4.1:26895920-26895939 | MS.gene006641:intron | 55.0% |
| !! | CAGTCGGAGAGTGTTGAGCA+AGG | - | chr4.1:26895284-26895303 | None:intergenic | 55.0% |
| !! | CGGAGAGTGTTGAGCAAGGA+TGG | - | chr4.1:26895280-26895299 | None:intergenic | 55.0% |
| ACTCCATCGTCGTCAGCGTG+TGG | + | chr4.1:26895192-26895211 | MS.gene006641:intron | 60.0% | |
| AGTGCCTGGTGGCAATGGTG+AGG | - | chr4.1:26895440-26895459 | None:intergenic | 60.0% | |
| GTGCCTGGTGGCAATGGTGA+GGG | - | chr4.1:26895439-26895458 | None:intergenic | 60.0% | |
| TGACCCTCACCATTGCCACC+AGG | + | chr4.1:26895433-26895452 | MS.gene006641:intron | 60.0% | |
| !! | AGGCATTCGGGTAGCGGGTT+GGG | + | chr4.1:26894941-26894960 | MS.gene006641:intron | 60.0% |
| !! | GAGGCATTCGGGTAGCGGGT+TGG | + | chr4.1:26894940-26894959 | MS.gene006641:intron | 65.0% |
| !! | TCGGGTAGCGGGTTGGGACT+AGG | + | chr4.1:26894947-26894966 | MS.gene006641:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 26890974 | 26896068 | 26890974 | ID=MS.gene006641 |
| chr4.1 | mRNA | 26890974 | 26896068 | 26890974 | ID=MS.gene006641.t1;Parent=MS.gene006641 |
| chr4.1 | exon | 26890974 | 26891156 | 26890974 | ID=MS.gene006641.t1.exon1;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26890974 | 26891156 | 26890974 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26891252 | 26891298 | 26891252 | ID=MS.gene006641.t1.exon2;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26891252 | 26891298 | 26891252 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26892165 | 26892240 | 26892165 | ID=MS.gene006641.t1.exon3;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26892165 | 26892240 | 26892165 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26892617 | 26892684 | 26892617 | ID=MS.gene006641.t1.exon4;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26892617 | 26892684 | 26892617 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26893454 | 26893523 | 26893454 | ID=MS.gene006641.t1.exon5;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26893454 | 26893523 | 26893454 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26893833 | 26893918 | 26893833 | ID=MS.gene006641.t1.exon6;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26893833 | 26893918 | 26893833 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26894092 | 26894154 | 26894092 | ID=MS.gene006641.t1.exon7;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26894092 | 26894154 | 26894092 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26894694 | 26894759 | 26894694 | ID=MS.gene006641.t1.exon8;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26894694 | 26894759 | 26894694 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| chr4.1 | exon | 26896020 | 26896068 | 26896020 | ID=MS.gene006641.t1.exon9;Parent=MS.gene006641.t1 |
| chr4.1 | CDS | 26896020 | 26896068 | 26896020 | ID=cds.MS.gene006641.t1;Parent=MS.gene006641.t1 |
| Gene Sequence |
| Protein sequence |
