AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074000


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074000.t1 MTR_0167s0060 100.000 235 0 0 1 235 1 235 9.45e-175 479
MS.gene074000.t1 MTR_8g075320 38.767 227 134 3 4 228 2 225 1.11e-51 168
MS.gene074000.t1 MTR_2g060830 38.961 231 136 4 6 231 9 239 1.25e-51 168
MS.gene074000.t1 MTR_7g070070 36.752 234 141 4 5 231 4 237 6.13e-49 161
MS.gene074000.t1 MTR_5g016590 36.325 234 142 4 5 231 4 237 4.15e-48 159
MS.gene074000.t1 MTR_8g464460 38.961 231 136 4 6 231 9 239 5.18e-48 159
MS.gene074000.t1 MTR_1g112250 35.526 228 142 2 4 228 6 231 1.84e-47 157
MS.gene074000.t1 MTR_2g016050 37.445 227 137 3 4 228 2 225 2.35e-46 154
MS.gene074000.t1 MTR_1g022410 35.111 225 141 3 1 222 1 223 1.79e-41 143
MS.gene074000.t1 MTR_6g024135 36.612 183 116 0 6 188 8 190 4.38e-39 135
MS.gene074000.t1 MTR_4g012740 28.409 264 144 6 1 222 232 492 2.81e-26 106
MS.gene074000.t1 MTR_4g057090 29.032 217 142 7 9 218 91 302 8.63e-16 75.5
MS.gene074000.t1 MTR_6g013300 28.571 189 123 4 32 214 136 318 9.07e-14 69.7
MS.gene074000.t1 MTR_3g113730 32.692 104 67 2 122 222 6 109 4.74e-13 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074000.t1 AT1G16470 94.043 235 14 0 1 235 1 235 5.50e-164 452
MS.gene074000.t1 AT1G16470 94.043 235 14 0 1 235 1 235 5.50e-164 452
MS.gene074000.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene074000.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene074000.t1 AT1G79210 93.191 235 16 0 1 235 1 235 1.03e-162 449
MS.gene074000.t1 AT5G66140 39.035 228 133 4 4 228 2 226 3.83e-50 164
MS.gene074000.t1 AT3G51260 38.596 228 134 4 4 228 2 226 8.88e-49 160
MS.gene074000.t1 AT3G51260 39.623 212 123 3 4 213 2 210 1.60e-48 160
MS.gene074000.t1 AT1G53850 35.526 228 142 2 4 228 6 231 1.62e-47 157
MS.gene074000.t1 AT1G53850 35.526 228 142 2 4 228 6 231 1.62e-47 157
MS.gene074000.t1 AT3G14290 35.526 228 142 2 4 228 6 231 3.49e-47 156
MS.gene074000.t1 AT5G35590 37.229 231 140 4 6 231 9 239 3.74e-47 156
MS.gene074000.t1 AT3G22110 36.245 229 136 4 5 230 4 225 2.25e-46 154
MS.gene074000.t1 AT2G05840 35.931 231 143 4 6 231 9 239 1.90e-44 149
MS.gene074000.t1 AT5G42790 36.444 225 138 3 1 222 1 223 3.01e-42 145
MS.gene074000.t1 AT1G47250 34.034 238 152 3 1 235 1 236 1.72e-40 140
MS.gene074000.t1 AT2G05840 34.928 209 132 3 6 210 9 217 1.95e-38 133
MS.gene074000.t1 AT2G27020 32.710 214 143 1 6 218 8 221 3.07e-36 128
MS.gene074000.t1 AT2G05840 35.955 178 112 2 6 181 9 186 4.45e-35 124
MS.gene074000.t1 AT2G27020 32.710 214 143 1 6 218 110 323 5.35e-35 127
MS.gene074000.t1 AT4G15165 26.754 228 117 4 5 230 4 183 3.36e-23 93.6

Find 50 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTGAAATTGATGATTATT+TGG 0.158426 2.1:-29873383 MS.gene074000:CDS
GGAGTGTCCCTGCTTGTTGC+TGG 0.253157 2.1:-29875429 MS.gene074000:CDS
GCTTTAACTGCTGTTGGTTC+TGG 0.266268 2.1:-29878497 MS.gene074000:CDS
GGGTCCTGATTTCCGAGTTT+TGG 0.297847 2.1:-29876700 MS.gene074000:CDS
CTGTATACAACACCTATATT+TGG 0.326037 2.1:+29877390 None:intergenic
CCCTTCCTTCAGTGTCAATA+TGG 0.330202 2.1:+29874907 None:intergenic
GAAGAAACTGCCATCTATAT+TGG 0.337394 2.1:-29877863 MS.gene074000:CDS
GATAGTGGTGTTAGGCCATT+TGG 0.346954 2.1:-29875450 MS.gene074000:intron
GTTGCTGGGTTTGATGATAA+TGG 0.347033 2.1:-29875414 MS.gene074000:CDS
ATGCAGGAATTTACTCAGTC+TGG 0.352073 2.1:-29876146 MS.gene074000:CDS
TTTGCCCTGATAGTGGTGTT+AGG 0.363096 2.1:-29875458 MS.gene074000:intron
AACATTGAAATCGGCATCAT+TGG 0.369450 2.1:-29874327 MS.gene074000:CDS
TTGTAGATACACTGATGATA+TGG 0.375486 2.1:-29874954 MS.gene074000:intron
CGAACCAAAACTCGGAAATC+AGG 0.376290 2.1:+29876696 None:intergenic
CAAATATAGGTGTTGTATAC+AGG 0.377485 2.1:-29877389 MS.gene074000:intron
GCAGTATCACCGATTGTATA+AGG 0.400018 2.1:-29876652 MS.gene074000:intron
GCTGAAATTGATGATTATTT+GGG 0.402207 2.1:-29873382 MS.gene074000:CDS
TTGGCATTTCCCAGGTTTGA+GGG 0.418418 2.1:-29874366 MS.gene074000:intron
TAATGGACCACAACTATATC+AGG 0.419917 2.1:-29875397 MS.gene074000:intron
TTGCTGTAGGTGGATCCATC+AGG 0.428961 2.1:-29875240 MS.gene074000:intron
GAGTGTCCCTGCTTGTTGCT+GGG 0.436297 2.1:-29875428 MS.gene074000:CDS
TTGGTTCTTGCAGCTGCAAA+TGG 0.438100 2.1:-29877904 MS.gene074000:intron
GCTTCATCAACCAATATAGA+TGG 0.444983 2.1:+29877853 None:intergenic
CAGTTATTAACACCAAATAT+AGG 0.451124 2.1:-29877402 MS.gene074000:CDS
TCTTGGAAAGCTTCTGCTAT+GGG 0.460139 2.1:-29875207 MS.gene074000:CDS
ACAAGTTGAGTGACAGGGAT+TGG 0.466755 2.1:+29876188 None:intergenic
TTCTTGGAAAGCTTCTGCTA+TGG 0.480341 2.1:-29875208 MS.gene074000:CDS
GAACATGCTTTAACTGCTGT+TGG 0.482096 2.1:-29878503 MS.gene074000:CDS
TCCCTCACAAGTTGAGTGAC+AGG 0.493790 2.1:+29876182 None:intergenic
GTTGGCATTTCCCAGGTTTG+AGG 0.504319 2.1:-29874367 MS.gene074000:intron
CTAAGACATTTCTTGAGAAG+AGG 0.508140 2.1:-29875167 MS.gene074000:intron
CATCAAACCCAGCAACAAGC+AGG 0.525359 2.1:+29875421 None:intergenic
GGTTCTGGACAAACTTCTCT+CGG 0.526164 2.1:-29878482 MS.gene074000:CDS
CAAACTTCTCTCGGTATCAA+AGG 0.527227 2.1:-29878473 MS.gene074000:intron
TATGGTGTACCTTATACAAT+CGG 0.527859 2.1:+29876643 None:intergenic
CCCTGTCACTCAACTTGTGA+GGG 0.529229 2.1:-29876183 MS.gene074000:CDS
AAATAATCATCAATTTCAGC+TGG 0.537679 2.1:+29873385 None:intergenic
TGCAGGAATTTACTCAGTCT+GGG 0.542143 2.1:-29876145 MS.gene074000:intron
GCCATATTGACACTGAAGGA+AGG 0.565690 2.1:-29874908 MS.gene074000:CDS
ACAAGCAGGGACACTCCAAA+TGG 0.570540 2.1:+29875435 None:intergenic
CCCTCACAAGTTGAGTGACA+GGG 0.583404 2.1:+29876183 None:intergenic
GGAAGTTGCTGCTGTCATGC+AGG 0.583748 2.1:-29876162 MS.gene074000:CDS
TGCCATACCTGATATAGTTG+TGG 0.596286 2.1:+29875390 None:intergenic
ATCAAACCCAGCAACAAGCA+GGG 0.606489 2.1:+29875422 None:intergenic
TCCCTGTCACTCAACTTGTG+AGG 0.608754 2.1:-29876184 MS.gene074000:CDS
CCATATTGACACTGAAGGAA+GGG 0.609464 2.1:-29874907 MS.gene074000:intron
CACAGCCATATTGACACTGA+AGG 0.611228 2.1:-29874912 MS.gene074000:CDS
ATCTGAACAAGCTTACCAGA+AGG 0.620962 2.1:+29878527 None:intergenic
AGATGGCAGTTTCTTCTCTG+TGG 0.628548 2.1:+29877870 None:intergenic
TCAGTGTCAATATGGCTGTG+TGG 0.671904 2.1:+29874915 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAACAAAAATTAGATA+AGG + chr2.1:29874250-29874269 None:intergenic 10.0%
!! AATATTCAAATGATAATAAA+GGG + chr2.1:29876448-29876467 None:intergenic 10.0%
!! TAATATTCAAATGATAATAA+AGG + chr2.1:29876449-29876468 None:intergenic 10.0%
!! TTTGTAACTATATATATATT+CGG - chr2.1:29873992-29874011 MS.gene074000:intron 10.0%
!!! TAAATATGATATTTTCATTA+AGG + chr2.1:29877093-29877112 None:intergenic 10.0%
!!! TATCTAATTTTTGTTTATTT+TGG - chr2.1:29874250-29874269 MS.gene074000:intron 10.0%
!!! TTTATTTTATTTTTTGTGAT+GGG + chr2.1:29875925-29875944 None:intergenic 10.0%
!!! TTTTATTTTATTTTTTGTGA+TGG + chr2.1:29875926-29875945 None:intergenic 10.0%
!!! TTTTTTTTCTTATTTTTTTC+TGG - chr2.1:29878425-29878444 MS.gene074000:intron 10.0%
!! AAATAAACAAATACTGAAAA+GGG + chr2.1:29877712-29877731 None:intergenic 15.0%
!! AAGGAAAAAGAAATTATTTA+AGG + chr2.1:29875541-29875560 None:intergenic 15.0%
!! ATATATGTTGCATAATTTAA+AGG + chr2.1:29878254-29878273 None:intergenic 15.0%
!! ATATTCAAATGATAATAAAG+GGG + chr2.1:29876447-29876466 None:intergenic 15.0%
!! ATCCAATTTGAATAATTAAA+AGG - chr2.1:29877794-29877813 MS.gene074000:intron 15.0%
!! ATTACATTAATCTCTAATAA+TGG + chr2.1:29876877-29876896 None:intergenic 15.0%
!! CAAAAGAAAAAAAAAATATC+CGG - chr2.1:29877517-29877536 MS.gene074000:intron 15.0%
!!! AATTAAAAGGTATAAATTTG+AGG - chr2.1:29877807-29877826 MS.gene074000:intron 15.0%
!!! ATAAAATTTTGTTCTATCAA+TGG + chr2.1:29874381-29874400 None:intergenic 15.0%
!!! TACCTTTTAATTATTCAAAT+TGG + chr2.1:29877799-29877818 None:intergenic 15.0%
!!! TATGCAACATATATTTTTAA+TGG - chr2.1:29878260-29878279 MS.gene074000:intron 15.0%
!!! TTTATCGTTTAAATTTTACT+TGG - chr2.1:29875422-29875441 MS.gene074000:CDS 15.0%
!!! TTTTTTTGTAACTATAGTTT+TGG - chr2.1:29874015-29874034 MS.gene074000:intron 15.0%
!! AAACACAAATGAAAAGTAAA+CGG + chr2.1:29875576-29875595 None:intergenic 20.0%
!! AAATTTCTTATTAGTGATCT+TGG - chr2.1:29877314-29877333 MS.gene074000:intron 20.0%
!! AATAAACAAATACTGAAAAG+GGG + chr2.1:29877711-29877730 None:intergenic 20.0%
!! AGTTACTGAAATGAATATTA+TGG - chr2.1:29877860-29877879 MS.gene074000:CDS 20.0%
!! ATAACATAAACTTATATGCT+GGG + chr2.1:29875885-29875904 None:intergenic 20.0%
!! CAAATAAACAAATACTGAAA+AGG + chr2.1:29877713-29877732 None:intergenic 20.0%
!! CATGTTTCAGAATTATAAAA+TGG - chr2.1:29877213-29877232 MS.gene074000:intron 20.0%
!! GAAAAGAATTAAAAAGAAAG+AGG + chr2.1:29877489-29877508 None:intergenic 20.0%
!! GAAACAAACAACATAAAAAA+TGG + chr2.1:29877467-29877486 None:intergenic 20.0%
!!! AAGTTTGAAATGAGTTTAAA+AGG - chr2.1:29876189-29876208 MS.gene074000:CDS 20.0%
!!! AATTTTTAGCTCAATTTGAT+CGG + chr2.1:29877762-29877781 None:intergenic 20.0%
!!! AGTTTGTTAATTATATTGCA+GGG - chr2.1:29878522-29878541 MS.gene074000:CDS 20.0%
!!! ATAATTTCTTTTTCCTTTTC+TGG - chr2.1:29875544-29875563 MS.gene074000:intron 20.0%
!!! ATCAGAGTCTTAATATTTTT+GGG + chr2.1:29878343-29878362 None:intergenic 20.0%
!!! CATTTTATAATTCTGAAACA+TGG + chr2.1:29877215-29877234 None:intergenic 20.0%
!!! CGGATATTTTTTTTTTCTTT+TGG + chr2.1:29877519-29877538 None:intergenic 20.0%
!!! GCTTTTATTTCAATTGATTT+CGG - chr2.1:29873563-29873582 MS.gene074000:intron 20.0%
!!! GTGTTAATAACTGAATTTTT+TGG + chr2.1:29874529-29874548 None:intergenic 20.0%
!!! TAAAGTTACTGTACTTTTAA+GGG - chr2.1:29876647-29876666 MS.gene074000:intron 20.0%
!!! TAGTTTGTTAATTATATTGC+AGG - chr2.1:29878521-29878540 MS.gene074000:CDS 20.0%
!!! TATCTTTTGGTTTTCTATTA+TGG - chr2.1:29875676-29875695 MS.gene074000:intron 20.0%
!!! TTAAAGTTACTGTACTTTTA+AGG - chr2.1:29876646-29876665 MS.gene074000:intron 20.0%
!!! TTAATTTTTATGCAACTGTT+GGG - chr2.1:29876288-29876307 MS.gene074000:intron 20.0%
!!! TTCGTTGCATTTTATATTTA+GGG + chr2.1:29876365-29876384 None:intergenic 20.0%
!!! TTTAATTCTTAGAGTTGATT+AGG - chr2.1:29877109-29877128 MS.gene074000:intron 20.0%
!!! TTTTCTTATTTTTTTCTGGT+GGG - chr2.1:29878429-29878448 MS.gene074000:intron 20.0%
!!! TTTTTCTTATTTTTTTCTGG+TGG - chr2.1:29878428-29878447 MS.gene074000:intron 20.0%
! AAATAATCATCAATTTCAGC+TGG + chr2.1:29878556-29878575 None:intergenic 25.0%
! AACATAAAAAATGGCAATGA+AGG + chr2.1:29877458-29877477 None:intergenic 25.0%
! AACTATTAAGTTACCAAATC+AGG + chr2.1:29878506-29878525 None:intergenic 25.0%
! ACAAATTGCAGAAATAATAG+AGG + chr2.1:29873902-29873921 None:intergenic 25.0%
! ACATAAAAAATGGCAATGAA+GGG + chr2.1:29877457-29877476 None:intergenic 25.0%
! ACATAACTGAATTATATCCA+AGG - chr2.1:29874805-29874824 MS.gene074000:intron 25.0%
! AGAAATAAACACACAAAAAC+TGG + chr2.1:29877145-29877164 None:intergenic 25.0%
! AGAGGATATTTGCAAATAAA+TGG + chr2.1:29873884-29873903 None:intergenic 25.0%
! ATAAACAAATACTGAAAAGG+GGG + chr2.1:29877710-29877729 None:intergenic 25.0%
! ATTCAAGATTTCATACATTC+TGG - chr2.1:29874471-29874490 MS.gene074000:intron 25.0%
! CAGTTATTAACACCAAATAT+AGG - chr2.1:29874536-29874555 MS.gene074000:intron 25.0%
! CATAACATAAACTTATATGC+TGG + chr2.1:29875886-29875905 None:intergenic 25.0%
! CATAACTGAATTATATCCAA+GGG - chr2.1:29874806-29874825 MS.gene074000:intron 25.0%
! CGATTATCATCATATGTTAA+GGG - chr2.1:29876166-29876185 MS.gene074000:CDS 25.0%
! GAATATTGCAATACATAGTA+TGG + chr2.1:29875316-29875335 None:intergenic 25.0%
! GAATCATATAGACCAAATAT+AGG + chr2.1:29875354-29875373 None:intergenic 25.0%
! GTGATATTTGCTTCATATTA+TGG - chr2.1:29874645-29874664 MS.gene074000:intron 25.0%
! GTTTATCTAATAATCCTTCT+TGG - chr2.1:29874272-29874291 MS.gene074000:intron 25.0%
! TAAGTTCAAACATGTTTGTA+TGG - chr2.1:29874602-29874621 MS.gene074000:intron 25.0%
! TATTTGAACTTTGTATCATC+TGG - chr2.1:29877727-29877746 MS.gene074000:intron 25.0%
! TCAATAGTTTATCTCTTACA+AGG + chr2.1:29875049-29875068 None:intergenic 25.0%
! TCGATTATCATCATATGTTA+AGG - chr2.1:29876165-29876184 MS.gene074000:CDS 25.0%
! TCTGCAAAAAACATTGAAAT+CGG - chr2.1:29877602-29877621 MS.gene074000:intron 25.0%
! TGAGCTAAAAATTATGCTAT+GGG - chr2.1:29877769-29877788 MS.gene074000:intron 25.0%
! TTAACATATGATGATAATCG+AGG + chr2.1:29876166-29876185 None:intergenic 25.0%
! TTACAAGCAATAGGAAATAA+AGG + chr2.1:29875476-29875495 None:intergenic 25.0%
! TTAGTTTCAAAGACTAACAA+AGG + chr2.1:29877543-29877562 None:intergenic 25.0%
! TTATATTTAGGGGTTCATTA+TGG + chr2.1:29876354-29876373 None:intergenic 25.0%
! TTGAGCTAAAAATTATGCTA+TGG - chr2.1:29877768-29877787 MS.gene074000:intron 25.0%
! TTGTGTGTATAAAAAAGAGT+CGG + chr2.1:29876402-29876421 None:intergenic 25.0%
! TTTAATGCATAAACGTTACA+CGG + chr2.1:29877067-29877086 None:intergenic 25.0%
!! AGCTGAAATTGATGATTATT+TGG - chr2.1:29878555-29878574 MS.gene074000:CDS 25.0%
!! ATTAATGATGGCAATGTTTT+AGG - chr2.1:29876805-29876824 MS.gene074000:intron 25.0%
!! GAAGAAACATTTTGCTTAAA+CGG + chr2.1:29877168-29877187 None:intergenic 25.0%
!! GATAAACATTTTGTTCCTAT+TGG - chr2.1:29876324-29876343 MS.gene074000:intron 25.0%
!! GATCAGAGTCTTAATATTTT+TGG + chr2.1:29878344-29878363 None:intergenic 25.0%
!! GCTGAAATTGATGATTATTT+GGG - chr2.1:29878556-29878575 MS.gene074000:CDS 25.0%
!! GTTAATTTTTATGCAACTGT+TGG - chr2.1:29876287-29876306 MS.gene074000:intron 25.0%
!! GTTCGTTGCATTTTATATTT+AGG + chr2.1:29876366-29876385 None:intergenic 25.0%
!! TCGTTGCATTTTATATTTAG+GGG + chr2.1:29876364-29876383 None:intergenic 25.0%
!! TCTTTCATTTCATTTTGTCT+GGG + chr2.1:29874737-29874756 None:intergenic 25.0%
!! TTCTTTCATTTCATTTTGTC+TGG + chr2.1:29874738-29874757 None:intergenic 25.0%
!! TTGATTTCGGTAATTGATTT+CGG - chr2.1:29873576-29873595 MS.gene074000:intron 25.0%
!! TTGTCTTTTCTGTTATCTTT+TGG - chr2.1:29875663-29875682 MS.gene074000:intron 25.0%
!!! AACTTTGAAAAGCATCAAAA+TGG + chr2.1:29876090-29876109 None:intergenic 25.0%
!!! ACTTTGAAAAGCATCAAAAT+GGG + chr2.1:29876089-29876108 None:intergenic 25.0%
!!! ATTTTATTTTTTGTGATGGG+AGG + chr2.1:29875922-29875941 None:intergenic 25.0%
!!! GCAACATATATTTTTAATGG+AGG - chr2.1:29878263-29878282 MS.gene074000:intron 25.0%
!!! TCAATTTTGTTTTTGTTCAG+TGG - chr2.1:29875212-29875231 MS.gene074000:CDS 25.0%
!!! TTTCTAACTTTGATTTTGTG+TGG - chr2.1:29873929-29873948 MS.gene074000:intron 25.0%
!!! TTTCTTATTTTTTTCTGGTG+GGG - chr2.1:29878430-29878449 MS.gene074000:intron 25.0%
!!! TTTGTTTTGAATACCTGATT+TGG - chr2.1:29878490-29878509 MS.gene074000:CDS 25.0%
!!! TTTTATTTTTTGTGATGGGA+GGG + chr2.1:29875921-29875940 None:intergenic 25.0%
AAACAAAAACTTGAGCTTAC+TGG + chr2.1:29878477-29878496 None:intergenic 30.0%
AAGATAACAGAAAAGACAAC+TGG + chr2.1:29875662-29875681 None:intergenic 30.0%
AAGGATGCTGAGTAATTTAA+AGG + chr2.1:29874231-29874250 None:intergenic 30.0%
AATATCAAATTCCGAAGTAC+AGG + chr2.1:29875393-29875412 None:intergenic 30.0%
AATGAAAATGCACCTAAGAT+TGG - chr2.1:29877238-29877257 MS.gene074000:intron 30.0%
AATGGAGGCTAATTAAAATC+AGG - chr2.1:29878278-29878297 MS.gene074000:intron 30.0%
AATGGGTACTTCATATTGAT+TGG + chr2.1:29876072-29876091 None:intergenic 30.0%
AATTGGATACAATCTTGAAG+TGG + chr2.1:29874182-29874201 None:intergenic 30.0%
ACATGGTTACAAACTTAAAG+TGG + chr2.1:29878117-29878136 None:intergenic 30.0%
AGGATGCTGAGTAATTTAAA+GGG + chr2.1:29874230-29874249 None:intergenic 30.0%
ATACTGTAAGTGAAAATTGC+AGG - chr2.1:29875725-29875744 MS.gene074000:intron 30.0%
ATCATCAGTGTATCTACAAT+TGG + chr2.1:29876983-29877002 None:intergenic 30.0%
ATGATAATAAAGGGGAGAAA+TGG + chr2.1:29876439-29876458 None:intergenic 30.0%
ATGCTTCAGTACTATCATAT+TGG - chr2.1:29873828-29873847 MS.gene074000:intron 30.0%
ATTCTGTGAAAACTGTTTCA+AGG + chr2.1:29874967-29874986 None:intergenic 30.0%
ATTTACATTGTTCGACAAAC+TGG - chr2.1:29878315-29878334 MS.gene074000:intron 30.0%
CAAGAAAAATATGAACCTGA+TGG + chr2.1:29876716-29876735 None:intergenic 30.0%
CTGTATACAACACCTATATT+TGG + chr2.1:29874551-29874570 None:intergenic 30.0%
CTTCAAGATTGTATCCAATT+TGG - chr2.1:29874182-29874201 MS.gene074000:intron 30.0%
GAAAGTGAAAACCACAAAAT+TGG + chr2.1:29877998-29878017 None:intergenic 30.0%
GCAATAGGAAATAAAGGAAT+AGG + chr2.1:29875470-29875489 None:intergenic 30.0%
GCTGTGAAGTTATAAATTCT+TGG - chr2.1:29878025-29878044 MS.gene074000:intron 30.0%
GGTTCAACTGAAAAATATTG+AGG - chr2.1:29877267-29877286 MS.gene074000:intron 30.0%
GTATGCTTTCACATTAATGA+TGG - chr2.1:29876793-29876812 MS.gene074000:intron 30.0%
GTTCATTATGGAATTCCAAT+AGG + chr2.1:29876342-29876361 None:intergenic 30.0%
TAAAATGCAACGAACTTAGT+TGG - chr2.1:29876371-29876390 MS.gene074000:intron 30.0%
TATCTACAATTGGACAATCA+AGG + chr2.1:29876973-29876992 None:intergenic 30.0%
TATGGTGTACCTTATACAAT+CGG + chr2.1:29875298-29875317 None:intergenic 30.0%
TGAATATGTTCTTAAACACG+AGG - chr2.1:29874686-29874705 MS.gene074000:intron 30.0%
TGTACTTCGGAATTTGATAT+TGG - chr2.1:29875392-29875411 MS.gene074000:intron 30.0%
TTCGGAATTTGATATTGGAA+TGG - chr2.1:29875397-29875416 MS.gene074000:intron 30.0%
TTCTTATATCGTGATAGTTG+AGG - chr2.1:29874331-29874350 MS.gene074000:CDS 30.0%
TTGTAGATACACTGATGATA+TGG - chr2.1:29876984-29877003 MS.gene074000:intron 30.0%
TTTATCATACACTAACTGAC+AGG + chr2.1:29877190-29877209 None:intergenic 30.0%
! AACTTGTTCATATTGCACAT+AGG - chr2.1:29873854-29873873 MS.gene074000:intron 30.0%
! AGGTATAAATTTGAGGCATA+TGG - chr2.1:29877814-29877833 MS.gene074000:intron 30.0%
! CAAATATAGGTGTTGTATAC+AGG - chr2.1:29874549-29874568 MS.gene074000:intron 30.0%
! CATCAGGTTCATATTTTTCT+TGG - chr2.1:29876714-29876733 MS.gene074000:intron 30.0%
! GGTATAAATTTGAGGCATAT+GGG - chr2.1:29877815-29877834 MS.gene074000:intron 30.0%
! TGCTATTTGAAGTTTCTGTT+AGG - chr2.1:29874709-29874728 MS.gene074000:intron 30.0%
! TTGAAACTAATCCCTTTTGT+TGG - chr2.1:29877553-29877572 MS.gene074000:intron 30.0%
! TTGATGCTTTTCAAAGTTGA+TGG - chr2.1:29876092-29876111 MS.gene074000:intron 30.0%
! TTTGTTATACATTTGCACCA+TGG - chr2.1:29877887-29877906 MS.gene074000:CDS 30.0%
!! CAATGTTTTAGGCAAATATG+CGG - chr2.1:29876816-29876835 MS.gene074000:intron 30.0%
!! TACTTTTAAGGGAAAGAGAA+GGG - chr2.1:29876658-29876677 MS.gene074000:CDS 30.0%
!!! TCAGTAAGTTGCTTTTTCTT+TGG - chr2.1:29874109-29874128 MS.gene074000:intron 30.0%
AAAGCTTAGATCAAGTCCTT+TGG - chr2.1:29877914-29877933 MS.gene074000:intron 35.0%
AAATACACGTTCTTTCAGAG+AGG + chr2.1:29876243-29876262 None:intergenic 35.0%
AACATTGAAATCGGCATCAT+TGG - chr2.1:29877611-29877630 MS.gene074000:intron 35.0%
AAGAAGAACCCTAAAACATG+AGG + chr2.1:29873536-29873555 None:intergenic 35.0%
AAGCTTAGATCAAGTCCTTT+GGG - chr2.1:29877915-29877934 MS.gene074000:intron 35.0%
ACAACATAATAGAGACTGTC+GGG + chr2.1:29878060-29878079 None:intergenic 35.0%
ACTATATCAGGTATGGCATA+TGG - chr2.1:29876553-29876572 MS.gene074000:intron 35.0%
AGAGAAATAACGTGTAATCC+AGG - chr2.1:29875959-29875978 MS.gene074000:intron 35.0%
AGTTCCTAATCCAACAATCT+TGG + chr2.1:29877400-29877419 None:intergenic 35.0%
ATAAATAGGGGGAATCAGTT+TGG + chr2.1:29874895-29874914 None:intergenic 35.0%
ATGAATTGATAGAGATGTCG+AGG + chr2.1:29876943-29876962 None:intergenic 35.0%
ATGACAAGATACAAGATGGA+GGG + chr2.1:29878191-29878210 None:intergenic 35.0%
CAACAGCAATGGAAAAAAGT+AGG + chr2.1:29875127-29875146 None:intergenic 35.0%
CAATGTTGTAACCTGTACTT+CGG - chr2.1:29875379-29875398 MS.gene074000:intron 35.0%
CATGATGACAAGATACAAGA+TGG + chr2.1:29878195-29878214 None:intergenic 35.0%
CCTAAAACATGAGGAAGAAA+GGG + chr2.1:29873527-29873546 None:intergenic 35.0%
CCTAACTCATTACAAGCAAT+AGG + chr2.1:29875485-29875504 None:intergenic 35.0%
CCTATTGCTTGTAATGAGTT+AGG - chr2.1:29875482-29875501 MS.gene074000:intron 35.0%
CTAAGACATTTCTTGAGAAG+AGG - chr2.1:29876771-29876790 MS.gene074000:intron 35.0%
CTTCATATTATGGCAGTTGA+TGG - chr2.1:29874655-29874674 MS.gene074000:intron 35.0%
GAAAACCACAAAATTGGACA+TGG + chr2.1:29877992-29878011 None:intergenic 35.0%
GAAAGAGAAGGGAAAATTGA+AGG - chr2.1:29876669-29876688 MS.gene074000:CDS 35.0%
GAAGAAACTGCCATCTATAT+TGG - chr2.1:29874075-29874094 MS.gene074000:intron 35.0%
GACAACATAATAGAGACTGT+CGG + chr2.1:29878061-29878080 None:intergenic 35.0%
GATAAAACACCAACTTTACC+TGG + chr2.1:29875980-29875999 None:intergenic 35.0%
GATTCATCAAGTACTTCTGA+GGG + chr2.1:29874870-29874889 None:intergenic 35.0%
GCTTCATCAACCAATATAGA+TGG + chr2.1:29874088-29874107 None:intergenic 35.0%
GGATGCTGAGTAATTTAAAG+GGG + chr2.1:29874229-29874248 None:intergenic 35.0%
GGGAAGTTATCTATTTGCAT+TGG + chr2.1:29878383-29878402 None:intergenic 35.0%
GGTTACAAACTTAAAGTGGA+GGG + chr2.1:29878113-29878132 None:intergenic 35.0%
GTTGAGGATACTTGAAAGTA+TGG - chr2.1:29874347-29874366 MS.gene074000:CDS 35.0%
TACAAGTTCAATCTACCACT+AGG + chr2.1:29873646-29873665 None:intergenic 35.0%
TCTCAAATACTAAGCCAAGA+AGG + chr2.1:29874289-29874308 None:intergenic 35.0%
TCTGAAAGAACGTGTATTTG+GGG - chr2.1:29876244-29876263 MS.gene074000:intron 35.0%
TGATTCATCAAGTACTTCTG+AGG + chr2.1:29874871-29874890 None:intergenic 35.0%
TGCTACTCACAAAATGCATT+GGG + chr2.1:29878403-29878422 None:intergenic 35.0%
TGGTTACAAACTTAAAGTGG+AGG + chr2.1:29878114-29878133 None:intergenic 35.0%
TGTGCAGGATAAGTTATGTT+GGG - chr2.1:29873761-29873780 MS.gene074000:intron 35.0%
TGTGTATAAAAAAGAGTCGG+AGG + chr2.1:29876399-29876418 None:intergenic 35.0%
TTATATGCTGGGAGTAGATA+TGG + chr2.1:29875874-29875893 None:intergenic 35.0%
TTGCTACTCACAAAATGCAT+TGG + chr2.1:29878404-29878423 None:intergenic 35.0%
TTGTTCATATTGCACATAGG+AGG - chr2.1:29873857-29873876 MS.gene074000:intron 35.0%
TTGTTCTATCAATGGCCAAT+TGG + chr2.1:29874373-29874392 None:intergenic 35.0%
TTTCAAAGACTAACAAAGGC+CGG + chr2.1:29877539-29877558 None:intergenic 35.0%
! AAATTTGAGGCATATGGGTT+AGG - chr2.1:29877820-29877839 MS.gene074000:intron 35.0%
! CAGCTCATGATGATTTTACA+GGG + chr2.1:29877358-29877377 None:intergenic 35.0%
! CATGATGATTTTACAGGGAT+GGG + chr2.1:29877353-29877372 None:intergenic 35.0%
! CCTTTCTTCCTCATGTTTTA+GGG - chr2.1:29873525-29873544 MS.gene074000:intron 35.0%
! CTAACAACTTTTAGTCCTTC+TGG - chr2.1:29873396-29873415 MS.gene074000:CDS 35.0%
! CTCTGAAAGAACGTGTATTT+GGG - chr2.1:29876243-29876262 MS.gene074000:intron 35.0%
! CTCTTTGTTTATATGACTGC+AGG - chr2.1:29874502-29874521 MS.gene074000:intron 35.0%
! GAAGCCTTGTGAGTTTATTT+GGG - chr2.1:29873733-29873752 MS.gene074000:intron 35.0%
! TAATGGACCACAACTATATC+AGG - chr2.1:29876541-29876560 MS.gene074000:intron 35.0%
! TACTTGAAAGTATGGCCAAT+TGG - chr2.1:29874355-29874374 MS.gene074000:CDS 35.0%
! TCATGATGATTTTACAGGGA+TGG + chr2.1:29877354-29877373 None:intergenic 35.0%
! TCTCTGAAAGAACGTGTATT+TGG - chr2.1:29876242-29876261 MS.gene074000:intron 35.0%
! TGAAGCCTTGTGAGTTTATT+TGG - chr2.1:29873732-29873751 MS.gene074000:intron 35.0%
! TGATCTAAGCTTTTTGACCA+TGG + chr2.1:29877907-29877926 None:intergenic 35.0%
!! AGGTGATGGGTTAGATAAAT+AGG + chr2.1:29874909-29874928 None:intergenic 35.0%
!! CCAAAAACTCAAAGTTGATG+AGG + chr2.1:29876002-29876021 None:intergenic 35.0%
!! CCTCATCAACTTTGAGTTTT+TGG - chr2.1:29875999-29876018 MS.gene074000:intron 35.0%
!! GGTGATGGGTTAGATAAATA+GGG + chr2.1:29874908-29874927 None:intergenic 35.0%
!! GTACTTTTAAGGGAAAGAGA+AGG - chr2.1:29876657-29876676 MS.gene074000:CDS 35.0%
!! GTGATGGGTTAGATAAATAG+GGG + chr2.1:29874907-29874926 None:intergenic 35.0%
!! TGATGGGTTAGATAAATAGG+GGG + chr2.1:29874906-29874925 None:intergenic 35.0%
!! TGTGTTTGATTAGTTTGCAC+TGG - chr2.1:29876595-29876614 MS.gene074000:intron 35.0%
!!! TGCTTTTTCGAACCAAAACT+CGG + chr2.1:29875253-29875272 None:intergenic 35.0%
!!! TTCTTTTTTTGCCCTGATAG+TGG - chr2.1:29876473-29876492 MS.gene074000:intron 35.0%
!!! TTGAAGGTTGTTTTTGCTGT+AGG - chr2.1:29876685-29876704 MS.gene074000:CDS 35.0%
!!! TTGTTTTTGTTCAGTGGCAT+GGG - chr2.1:29875218-29875237 MS.gene074000:CDS 35.0%
!!! TTTGTTTTTGTTCAGTGGCA+TGG - chr2.1:29875217-29875236 MS.gene074000:CDS 35.0%
AAACATGAGGAAGAAAGGGT+TGG + chr2.1:29873523-29873542 None:intergenic 40.0%
AAACGATAGCACAGCCAAAT+TGG + chr2.1:29874199-29874218 None:intergenic 40.0%
AAGTTCAATCTACCACTAGG+AGG + chr2.1:29873643-29873662 None:intergenic 40.0%
ACGTGTAATCCAGGTAAAGT+TGG - chr2.1:29875968-29875987 MS.gene074000:intron 40.0%
ACTGTTTCAAGGAGTTACTC+AGG + chr2.1:29874956-29874975 None:intergenic 40.0%
AGACCAAATATAGGCAGAAC+AGG + chr2.1:29875345-29875364 None:intergenic 40.0%
AGGGTTTGTAAACGAAAGGA+GGG + chr2.1:29874851-29874870 None:intergenic 40.0%
AGTTCAATCTACCACTAGGA+GGG + chr2.1:29873642-29873661 None:intergenic 40.0%
ATCTGAACAAGCTTACCAGA+AGG + chr2.1:29873414-29873433 None:intergenic 40.0%
ATGCAGGAATTTACTCAGTC+TGG - chr2.1:29875792-29875811 MS.gene074000:intron 40.0%
CAAAACCAAACAACACCCAA+AGG + chr2.1:29877933-29877952 None:intergenic 40.0%
CAAACTTCTCTCGGTATCAA+AGG - chr2.1:29873465-29873484 MS.gene074000:intron 40.0%
CACAAAATTGGACATGGTGT+TGG + chr2.1:29877986-29878005 None:intergenic 40.0%
CATGCCCAAATAAACTCACA+AGG + chr2.1:29873740-29873759 None:intergenic 40.0%
CCATATTGACACTGAAGGAA+GGG - chr2.1:29877031-29877050 MS.gene074000:intron 40.0%
CCCTAAAACATGAGGAAGAA+AGG + chr2.1:29873528-29873547 None:intergenic 40.0%
CTGTTTCAAGGAGTTACTCA+GGG + chr2.1:29874955-29874974 None:intergenic 40.0%
CTTCCTGTTCTGCCTATATT+TGG - chr2.1:29875339-29875358 MS.gene074000:intron 40.0%
CTTGTATGATTGTCGTCTGA+TGG - chr2.1:29873660-29873679 MS.gene074000:intron 40.0%
CTTGTGAGTTTATTTGGGCA+TGG - chr2.1:29873738-29873757 MS.gene074000:intron 40.0%
GAAAGTCCACAAACAACTTG+CGG + chr2.1:29874411-29874430 None:intergenic 40.0%
GAACATGCTTTAACTGCTGT+TGG - chr2.1:29873435-29873454 MS.gene074000:intron 40.0%
GACCACAACTATATCAGGTA+TGG - chr2.1:29876546-29876565 MS.gene074000:intron 40.0%
GATGACAAGATACAAGATGG+AGG + chr2.1:29878192-29878211 None:intergenic 40.0%
GTGATCTTGGCATATACCAA+AGG - chr2.1:29877327-29877346 MS.gene074000:intron 40.0%
GTGTGCAGGATAAGTTATGT+TGG - chr2.1:29873760-29873779 MS.gene074000:intron 40.0%
TAAACGGCACTATCCAGAAA+AGG + chr2.1:29875560-29875579 None:intergenic 40.0%
TACCAAAAGCTCAACAGCAA+TGG + chr2.1:29875138-29875157 None:intergenic 40.0%
TAGTTTCCGCAAGTTGTTTG+TGG - chr2.1:29874402-29874421 MS.gene074000:intron 40.0%
TCTGAGGGTTTGTAAACGAA+AGG + chr2.1:29874855-29874874 None:intergenic 40.0%
TCTTGGAAAGCTTCTGCTAT+GGG - chr2.1:29876731-29876750 MS.gene074000:intron 40.0%
TGAACCAAGAAGCCAATCTT+AGG + chr2.1:29877253-29877272 None:intergenic 40.0%
TGACAAGATACAAGATGGAG+GGG + chr2.1:29878190-29878209 None:intergenic 40.0%
TGCAGGAATTTACTCAGTCT+GGG - chr2.1:29875793-29875812 MS.gene074000:intron 40.0%
TGCCATACCTGATATAGTTG+TGG + chr2.1:29876551-29876570 None:intergenic 40.0%
TTCTTGGAAAGCTTCTGCTA+TGG - chr2.1:29876730-29876749 MS.gene074000:intron 40.0%
TTGGAGCCTTGCTAACATAA+AGG + chr2.1:29877381-29877400 None:intergenic 40.0%
TTGGTGCAGACAAAAAGTTC+AGG - chr2.1:29877630-29877649 MS.gene074000:intron 40.0%
! AAGGGTTTTCCCTTCACAAA+AGG - chr2.1:29874824-29874843 MS.gene074000:intron 40.0%
! ATGATTGTCGTCTGATGGAT+AGG - chr2.1:29873665-29873684 MS.gene074000:intron 40.0%
! CAACACCATGTCCAATTTTG+TGG - chr2.1:29877984-29878003 MS.gene074000:intron 40.0%
! CCCTTTCTTCCTCATGTTTT+AGG - chr2.1:29873524-29873543 MS.gene074000:intron 40.0%
! GAGCTTTTGGTATATGACAG+TGG - chr2.1:29875146-29875165 MS.gene074000:intron 40.0%
! GCAGCTCATGATGATTTTAC+AGG + chr2.1:29877359-29877378 None:intergenic 40.0%
! GCAGTATCACCGATTGTATA+AGG - chr2.1:29875286-29875305 MS.gene074000:intron 40.0%
! GTTGCTGGGTTTGATGATAA+TGG - chr2.1:29876524-29876543 MS.gene074000:intron 40.0%
! TTTTGTGAAGGGAAAACCCT+TGG + chr2.1:29874825-29874844 None:intergenic 40.0%
!! TTCCATTGCTGTTGAGCTTT+TGG - chr2.1:29875133-29875152 MS.gene074000:intron 40.0%
!!! AAGGTTGTTTTTGCTGTAGG+TGG - chr2.1:29876688-29876707 MS.gene074000:CDS 40.0%
!!! CTTATTTTTTTCTGGTGGGG+TGG - chr2.1:29878433-29878452 MS.gene074000:intron 40.0%
!!! GAGTTTTGGTTCGAAAAAGC+AGG - chr2.1:29875252-29875271 MS.gene074000:intron 40.0%
AATGGCCTAACACCACTATC+AGG + chr2.1:29876488-29876507 None:intergenic 45.0%
ACCTGGGAAATGCCAACAAA+AGG + chr2.1:29877568-29877587 None:intergenic 45.0%
AGATGGCAGTTTCTTCTCTG+TGG + chr2.1:29874071-29874090 None:intergenic 45.0%
ATCAAACCCAGCAACAAGCA+GGG + chr2.1:29876519-29876538 None:intergenic 45.0%
ATGGCCTAACACCACTATCA+GGG + chr2.1:29876487-29876506 None:intergenic 45.0%
ATTGACACTGAAGGAAGGGT+AGG - chr2.1:29877035-29877054 MS.gene074000:intron 45.0%
CACAGCCATATTGACACTGA+AGG - chr2.1:29877026-29877045 MS.gene074000:intron 45.0%
CCCTTCCTTCAGTGTCAATA+TGG + chr2.1:29877034-29877053 None:intergenic 45.0%
CCTGGGAAATGCCAACAAAA+GGG + chr2.1:29877567-29877586 None:intergenic 45.0%
CGAACCAAAACTCGGAAATC+AGG + chr2.1:29875245-29875264 None:intergenic 45.0%
GAGCTGCCTTTATGTTAGCA+AGG - chr2.1:29877372-29877391 MS.gene074000:intron 45.0%
GAGGGTTTGTAAACGAAAGG+AGG + chr2.1:29874852-29874871 None:intergenic 45.0%
GCAGGATAAGTTATGTTGGG+AGG - chr2.1:29873764-29873783 MS.gene074000:intron 45.0%
GCCATATTGACACTGAAGGA+AGG - chr2.1:29877030-29877049 MS.gene074000:intron 45.0%
GGAAGGGATTAGAAGGTGAT+GGG + chr2.1:29874922-29874941 None:intergenic 45.0%
GGCTCCAAGATTGTTGGATT+AGG - chr2.1:29877393-29877412 MS.gene074000:CDS 45.0%
GGTTCGAAAAAGCAGGAAAC+AGG - chr2.1:29875259-29875278 MS.gene074000:intron 45.0%
TAATAGAGACTGTCGGGCAA+CGG + chr2.1:29878054-29878073 None:intergenic 45.0%
TAGCAAGGCTCCAAGATTGT+TGG - chr2.1:29877387-29877406 MS.gene074000:intron 45.0%
TAGGAGGGACAAAGTGAACT+CGG + chr2.1:29873627-29873646 None:intergenic 45.0%
TCAAGGAGTTACTCAGGGAT+AGG + chr2.1:29874950-29874969 None:intergenic 45.0%
TCAGTGTCAATATGGCTGTG+TGG + chr2.1:29877026-29877045 None:intergenic 45.0%
TGGAAGGGATTAGAAGGTGA+TGG + chr2.1:29874923-29874942 None:intergenic 45.0%
TTGGCATTTCCCAGGTTTGA+GGG - chr2.1:29877572-29877591 MS.gene074000:intron 45.0%
TTTATTTGGGCATGGTGTGC+AGG - chr2.1:29873746-29873765 MS.gene074000:intron 45.0%
! AAAGGAGGGACCTTTTGTGA+AGG + chr2.1:29874837-29874856 None:intergenic 45.0%
! AAGGAGGGACCTTTTGTGAA+GGG + chr2.1:29874836-29874855 None:intergenic 45.0%
! ACAAGTTGAGTGACAGGGAT+TGG + chr2.1:29875753-29875772 None:intergenic 45.0%
! ATTTTACAGGGATGGGCCTT+TGG + chr2.1:29877346-29877365 None:intergenic 45.0%
! GATAGTGGTGTTAGGCCATT+TGG - chr2.1:29876488-29876507 MS.gene074000:intron 45.0%
! GGGGTATTTGACAACAATGG+AGG + chr2.1:29878171-29878190 None:intergenic 45.0%
! TTGGTTCTTGCAGCTGCAAA+TGG - chr2.1:29874034-29874053 MS.gene074000:intron 45.0%
!! CAAGTCCTTTGGGTGTTGTT+TGG - chr2.1:29877925-29877944 MS.gene074000:intron 45.0%
!! GCTTTAACTGCTGTTGGTTC+TGG - chr2.1:29873441-29873460 MS.gene074000:intron 45.0%
!! GGAGGGGTATTTGACAACAA+TGG + chr2.1:29878174-29878193 None:intergenic 45.0%
!! GGTTCTGGACAAACTTCTCT+CGG - chr2.1:29873456-29873475 MS.gene074000:intron 45.0%
!! TATGGGTTAGGACTGCGAAA+TGG - chr2.1:29877832-29877851 MS.gene074000:intron 45.0%
!! TGCACCTAAGATTGGCTTCT+TGG - chr2.1:29877246-29877265 MS.gene074000:intron 45.0%
!! TTTGCCCTGATAGTGGTGTT+AGG - chr2.1:29876480-29876499 MS.gene074000:intron 45.0%
AATAGAGACTGTCGGGCAAC+GGG + chr2.1:29878053-29878072 None:intergenic 50.0%
ACAAGCAGGGACACTCCAAA+TGG + chr2.1:29876506-29876525 None:intergenic 50.0%
AGAGATCTGTCCCTCAAACC+TGG + chr2.1:29877585-29877604 None:intergenic 50.0%
ATACCACACGTAGACGGGAA+TGG + chr2.1:29878148-29878167 None:intergenic 50.0%
CATCAAACCCAGCAACAAGC+AGG + chr2.1:29876520-29876539 None:intergenic 50.0%
CCCTGTCACTCAACTTGTGA+GGG - chr2.1:29875755-29875774 MS.gene074000:intron 50.0%
GAGATCTGTCCCTCAAACCT+GGG + chr2.1:29877584-29877603 None:intergenic 50.0%
GGCAGTTGGAAGGGATTAGA+AGG + chr2.1:29874929-29874948 None:intergenic 50.0%
GTTACTCAGGGATAGGCAGT+TGG + chr2.1:29874943-29874962 None:intergenic 50.0%
GTTCACTTTGTCCCTCCTAG+TGG - chr2.1:29873628-29873647 MS.gene074000:intron 50.0%
GTTGGCATTTCCCAGGTTTG+AGG - chr2.1:29877571-29877590 MS.gene074000:intron 50.0%
TCAGGGATAGGCAGTTGGAA+GGG + chr2.1:29874938-29874957 None:intergenic 50.0%
TCCCTGTCACTCAACTTGTG+AGG - chr2.1:29875754-29875773 MS.gene074000:intron 50.0%
TGGAGGATACCACACGTAGA+CGG + chr2.1:29878154-29878173 None:intergenic 50.0%
TTGCTGTAGGTGGATCCATC+AGG - chr2.1:29876698-29876717 MS.gene074000:CDS 50.0%
! CCCTCACAAGTTGAGTGACA+GGG + chr2.1:29875758-29875777 None:intergenic 50.0%
! CCCTTTTGTTGGCATTTCCC+AGG - chr2.1:29877564-29877583 MS.gene074000:intron 50.0%
! GGGTCCTGATTTCCGAGTTT+TGG - chr2.1:29875238-29875257 MS.gene074000:intron 50.0%
! TCCCTCACAAGTTGAGTGAC+AGG + chr2.1:29875759-29875778 None:intergenic 50.0%
!! TTTTCTGGTGGGGTGGCATT+GGG - chr2.1:29878440-29878459 MS.gene074000:intron 50.0%
!! TTTTTCTGGTGGGGTGGCAT+TGG - chr2.1:29878439-29878458 MS.gene074000:intron 50.0%
ATAGAGACTGTCGGGCAACG+GGG + chr2.1:29878052-29878071 None:intergenic 55.0%
CGGGAATGGAGCATGCAACA+TGG + chr2.1:29878134-29878153 None:intergenic 55.0%
CTCAGGGATAGGCAGTTGGA+AGG + chr2.1:29874939-29874958 None:intergenic 55.0%
GGAAGTTGCTGCTGTCATGC+AGG - chr2.1:29875776-29875795 MS.gene074000:intron 55.0%
GGAGGATACCACACGTAGAC+GGG + chr2.1:29878153-29878172 None:intergenic 55.0%
! AGGGTGTTTAGTGCGAGTGG+AGG + chr2.1:29878094-29878113 None:intergenic 55.0%
! GAGTGTCCCTGCTTGTTGCT+GGG - chr2.1:29876510-29876529 MS.gene074000:intron 55.0%
! TTTCTGGTGGGGTGGCATTG+GGG - chr2.1:29878441-29878460 MS.gene074000:intron 55.0%
!! AGTGCGAGTGGAGGAGTACT+AGG + chr2.1:29878085-29878104 None:intergenic 55.0%
!! TGGAGGGTGTTTAGTGCGAG+TGG + chr2.1:29878097-29878116 None:intergenic 55.0%
GCTCCATTCCCGTCTACGTG+TGG - chr2.1:29878142-29878161 MS.gene074000:intron 60.0%
! GGAGTGTCCCTGCTTGTTGC+TGG - chr2.1:29876509-29876528 MS.gene074000:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 29873369 29878591 29873369 ID=MS.gene074000
chr2.1 mRNA 29873369 29878591 29873369 ID=MS.gene074000.t1;Parent=MS.gene074000
chr2.1 exon 29878474 29878591 29878474 ID=MS.gene074000.t1.exon1;Parent=MS.gene074000.t1
chr2.1 CDS 29878474 29878591 29878474 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29877849 29877913 29877849 ID=MS.gene074000.t1.exon2;Parent=MS.gene074000.t1
chr2.1 CDS 29877849 29877913 29877849 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29877390 29877436 29877390 ID=MS.gene074000.t1.exon3;Parent=MS.gene074000.t1
chr2.1 CDS 29877390 29877436 29877390 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29876653 29876728 29876653 ID=MS.gene074000.t1.exon4;Parent=MS.gene074000.t1
chr2.1 CDS 29876653 29876728 29876653 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29876146 29876213 29876146 ID=MS.gene074000.t1.exon5;Parent=MS.gene074000.t1
chr2.1 CDS 29876146 29876213 29876146 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29875398 29875467 29875398 ID=MS.gene074000.t1.exon6;Parent=MS.gene074000.t1
chr2.1 CDS 29875398 29875467 29875398 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29875168 29875253 29875168 ID=MS.gene074000.t1.exon7;Parent=MS.gene074000.t1
chr2.1 CDS 29875168 29875253 29875168 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29874908 29874970 29874908 ID=MS.gene074000.t1.exon8;Parent=MS.gene074000.t1
chr2.1 CDS 29874908 29874970 29874908 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29874309 29874374 29874309 ID=MS.gene074000.t1.exon9;Parent=MS.gene074000.t1
chr2.1 CDS 29874309 29874374 29874309 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
chr2.1 exon 29873369 29873417 29873369 ID=MS.gene074000.t1.exon10;Parent=MS.gene074000.t1
chr2.1 CDS 29873369 29873417 29873369 ID=cds.MS.gene074000.t1;Parent=MS.gene074000.t1
Gene Sequence

>MS.gene074000

ATGGGAGATAGTCAATACTCGTTTTCTCTAACAACTTTTAGTCCTTCTGGTAAGCTTGTTCAGATTGAACATGCTTTAACTGCTGTTGGTTCTGGACAAACTTCTCTCGGTATCAAAGGTATTTCTTTCATTCATTCGATTCGATCTGCTTCCAACCCTTTCTTCCTCATGTTTTAGGGTTCTTCTTTTCAATTGCTTTTATTTCAATTGATTTCGGTAATTGATTTCGGTACTGTTTGTTCTTGTATTCTTTTTCCGAGTTCACTTTGTCCCTCCTAGTGGTAGATTGAACTTGTATGATTGTCGTCTGATGGATAGGCAGAATGAATGTTGATTTCTTATTTATTGTGTAACTGTTCTTTATGAAGCCTTGTGAGTTTATTTGGGCATGGTGTGCAGGATAAGTTATGTTGGGAGGCTAGAGTTGAAATTTATTTAGTTTGCGATTACATTTATTTTATGCTTCAGTACTATCATATTGGTATAACTTGTTCATATTGCACATAGGAGGTCCATTTATTTGCAAATATCCTCTATTATTTCTGCAATTTGTACTATCTTTTCTAACTTTGATTTTGTGTGGATGATTTCTTTATTGTAATATTAGCTGCAACATGTGTTTGTTTGTAACTATATATATATTCGGTTTTTTTGTAACTATAGTTTTGGTTCTTGCAGCTGCAAATGGAGTTGTCATTGCCACAGAGAAGAAACTGCCATCTATATTGGTTGATGAAGCATCAGTAAGTTGCTTTTTCTTTGGATCAATTTTTGTACATTATTATTAGTGAAATATAAATCTGAAATTGTCCACTTCAAGATTGTATCCAATTTGGCTGTGCTATCGTTTTCTGCATCCCCTTTAAATTACTCAGCATCCTTATCTAATTTTTGTTTATTTTGGTTTATCTAATAATCCTTCTTGGCTTAGTATTTGAGAAGTATTTGCAAAGTAGAAAATGTTCTTATATCGTGATAGTTGAGGATACTTGAAAGTATGGCCAATTGGCCATTGATAGAACAAAATTTTATCTAGTTTCCGCAAGTTGTTTGTGGACTTTCTTTTATAAACGAGCTATGTAATATTTAGTTCACTTGATTAATTCAAGATTTCATACATTCTGGAGTTTTTACTCTTTGTTTATATGACTGCAGGTCCAAAAAATTCAGTTATTAACACCAAATATAGGTGTTGTATACAGGTTTGTTTCTTCTTACATGTTTCAATCACTTTAAGTTCAAACATGTTTGTATGGCATTATTATTTCTTTGTACAGTGATATTTGCTTCATATTATGGCAGTTGATGGTTGAGTTTTGAATATGTTCTTAAACACGAGGTGCTATTTGAAGTTTCTGTTAGGAACCCAGACAAAATGAAATGAAAGAAAACTAGAAAGAATGAAAATCATAGAAGTGTATTATTGAAAACTAAACACATAACTGAATTATATCCAAGGGTTTTCCCTTCACAAAAGGTCCCTCCTTTCGTTTACAAACCCTCAGAAGTACTTGATGAATCATCCAAACTGATTCCCCCTATTTATCTAACCCATCACCTTCTAATCCCTTCCAACTGCCTATCCCTGAGTAACTCCTTGAAACAGTTTTCACAGAATAAACAACTGATGAATCTTGAAAGCTATTTTCAATGTTTTTCTATATTTTCATTTTAACTCCTTGTAAGAGATAAACTATTGAAAGAACATGTTTTCTGATGTTTATTGTGTGTGAAGCTTCATTTAATGTCTATTAGCCTACTTTTTTCCATTGCTGTTGAGCTTTTGGTATATGACAGTGGTTATTTTTGCTTAGATTGTTTTCAAATATTGTATTTATTGATATCAATTTTGTTTTTGTTCAGTGGCATGGGTCCTGATTTCCGAGTTTTGGTTCGAAAAAGCAGGAAACAGGCTGAGCAGTATCACCGATTGTATAAGGTACACCATACTATGTATTGCAATATTCTTTCTTCCTGTTCTGCCTATATTTGGTCTATATGATTCAGTTACAATGTTGTAACCTGTACTTCGGAATTTGATATTGGAATGGATTTTATCGTTTAAATTTTACTTGGTAACATCTACATATGTAGTCTGCCTATTCCTTTATTTCCTATTGCTTGTAATGAGTTAGGACACTGTTGCTTGTTATACATCAATTACATGTTCCTTAAATAATTTCTTTTTCCTTTTCTGGATAGTGCCGTTTACTTTTCATTTGTGTTTGTTGAAAAATACACAGTTTATGCTACTGATAATGTTGATCTTTATGAATATGCATTTTCTAGTCCAGTTGTCTTTTCTGTTATCTTTTGGTTTTCTATTATGGATCTTTTGTTAAAAATAGACTGTCTGATACTGTAAGTGAAAATTGCAGGAACCAATCCCTGTCACTCAACTTGTGAGGGAAGTTGCTGCTGTCATGCAGGAATTTACTCAGTCTGGGTAATTATTAATTCTTCAGTGTCTTTGCTTTCAGAAATTTTCACATCTGAACTTTACCATATCTACTCCCAGCATATAAGTTTATGTTATGTACGTATGTCATCCCTCCCATCACAAAAAATAAAATAAAAAACTAAGATAGAGAGAGAAATAACGTGTAATCCAGGTAAAGTTGGTGTTTTATCCTCATCAACTTTGAGTTTTTGGTAAATTTCACAACTTATAAGAAAATAAAATTGTCAAAAGCATTTACTCCAATCAATATGAAGTACCCATTTTGATGCTTTTCAAAGTTGATGGATATTAATTGTTATAATCAAATTAAATGTCGAGAGATCGTTTCACAAACCTCGATTATCATCATATGTTAAGGGAAGTTTGAAATGAGTTTAAAAGGTGTCTGACTTTGAAACTTTGTACATTTTCCTCTCTGAAAGAACGTGTATTTGGGGATCTATTAACAGCAGCATTAGTTAATTTTTATGCAACTGTTGGGAACTCACTGTTTAGATAAACATTTTGTTCCTATTGGAATTCCATAATGAACCCCTAAATATAAAATGCAACGAACTTAGTTGGATCCTCCGACTCTTTTTTATACACACAATTGTCTTTTTCTTTCCATTTCTCCCCTTTATTATCATTTGAATATTAATTTTTCTTTTTTTGCCCTGATAGTGGTGTTAGGCCATTTGGAGTGTCCCTGCTTGTTGCTGGGTTTGATGATAATGGACCACAACTATATCAGGTATGGCATATGGTGTACTTTGTAATTTGTATTGTGTTTGATTAGTTTGCACTGGAATTTTTTTCTTCTTGCTCTAGAATTGTTTAAAGTTACTGTACTTTTAAGGGAAAGAGAAGGGAAAATTGAAGGTTGTTTTTGCTGTAGGTGGATCCATCAGGTTCATATTTTTCTTGGAAAGCTTCTGCTATGGGTAAAAATGTTTCTAATGCTAAGACATTTCTTGAGAAGAGGTATGCTTTCACATTAATGATGGCAATGTTTTAGGCAAATATGCGGAGTCTATCAATGTATAATGTCTATGTCTGCTGTGTCCATTATTAGAGATTAATGTAATGATATGTTTCTGTTTGATGTTAGTATCGTTCAGTACAGATAAACCTCGACATCTCTATCAATTCATTTTTTTTCCTTGATTGTCCAATTGTAGATACACTGATGATATGGAGCTTGATGATGCAGTCCACACAGCCATATTGACACTGAAGGAAGGGTAGGAAAATGCCGTGTAACGTTTATGCATTAAAAAACCTTAATGAAAATATCATATTTAATTCTTAGAGTTGATTAGGTCGCAAAAAACCAGTTTTTGTGTGTTTATTTCTCCGTTTAAGCAAAATGTTTCTTCCTGTCAGTTAGTGTATGATAAATTCCATGTTTCAGAATTATAAAATGGAGAATGAAAATGCACCTAAGATTGGCTTCTTGGTTCAACTGAAAAATATTGAGGCTATTCTTATCTAGTGTATCAAAGAAATTTCTTATTAGTGATCTTGGCATATACCAAAGGCCCATCCCTGTAAAATCATCATGAGCTGCCTTTATGTTAGCAAGGCTCCAAGATTGTTGGATTAGGAACTTGAAAATGACAGCGAGTGATTACTGTTCTTGTTTCCCTTCATTGCCATTTTTTATGTTGTTTGTTTCCTCTTTCTTTTTAATTCTTTTCTGCTATACCAAAAGAAAAAAAAAATATCCGGCCTTTGTTAGTCTTTGAAACTAATCCCTTTTGTTGGCATTTCCCAGGTTTGAGGGACAGATCTCTGCAAAAAACATTGAAATCGGCATCATTGGTGCAGACAAAAAGTTCAGGTGCATATCTTTGTTCCCTAAAATATACTTTGGCTGACTTTTCTGTCATGTTTTTCCCCCTTTTCAGTATTTGTTTATTTGAACTTTGTATCATCTGGTTTCTTTTACCGATCAAATTGAGCTAAAAATTATGCTATGGGTTATCCAATTTGAATAATTAAAAGGTATAAATTTGAGGCATATGGGTTAGGACTGCGAAATGGAATTTAGTTACTGAAATGAATATTATGGTGTGTTTGTTATACATTTGCACCATGGTCAAAAAGCTTAGATCAAGTCCTTTGGGTGTTGTTTGGTTTTGTTATTAGTTTAGTTTTGAAATGTTTAAAAACCAACACCATGTCCAATTTTGTGGTTTTCACTTTCAATAATTGCTGTGAAGTTATAAATTCTTGGACCCCGTTGCCCGACAGTCTCTATTATGTTGTCACCTAGTACTCCTCCACTCGCACTAAACACCCTCCACTTTAAGTTTGTAACCATGTTGCATGCTCCATTCCCGTCTACGTGTGGTATCCTCCATTGTTGTCAAATACCCCTCCATCTTGTATCTTGTCATCATGTTTTGAAATCAATGACATGTATATATTATTTTTTTTCCTTTAAATTATGCAACATATATTTTTAATGGAGGCTAATTAAAATCAGGAAAGATATTCACATATTTACATTGTTCGACAAACTGGATCCCAAAAATATTAAGACTCTGATCTGAGTTTTTTGTTTTACCAATGCAAATAGATAACTTCCCAATGCATTTTGTGAGTAGCAAGTTTTTTTTCTTATTTTTTTCTGGTGGGGTGGCATTGGGGCATAAAACGACCAGTAAGCTCAAGTTTTTGTTTTGAATACCTGATTTGGTAACTTAATAGTTTGTTAATTATATTGCAGGGTATTGACACCAGCTGAAATTGATGATTATTTGGGTGAAGTAGAATAA

Protein sequence

>MS.gene074000.t1

MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDEASVQKIQLLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVREVAAVMQEFTQSGGVRPFGVSLLVAGFDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISAKNIEIGIIGADKKFRVLTPAEIDDYLGEVE