Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039040.t1 | XP_013442471.1 | 100 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 7.00E-126 | 459.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039040.t1 | O23708 | 94.0 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 1.7e-120 | 433.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039040.t1 | I3SFE3 | 100.0 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 5.1e-126 | 459.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039040.t1 | MTR_0167s0060 | 100.000 | 235 | 0 | 0 | 1 | 235 | 1 | 235 | 9.45e-175 | 479 |
MS.gene039040.t1 | MTR_8g075320 | 38.767 | 227 | 134 | 3 | 4 | 228 | 2 | 225 | 1.11e-51 | 168 |
MS.gene039040.t1 | MTR_2g060830 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 1.25e-51 | 168 |
MS.gene039040.t1 | MTR_7g070070 | 36.752 | 234 | 141 | 4 | 5 | 231 | 4 | 237 | 6.13e-49 | 161 |
MS.gene039040.t1 | MTR_5g016590 | 36.325 | 234 | 142 | 4 | 5 | 231 | 4 | 237 | 4.15e-48 | 159 |
MS.gene039040.t1 | MTR_8g464460 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 5.18e-48 | 159 |
MS.gene039040.t1 | MTR_1g112250 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.84e-47 | 157 |
MS.gene039040.t1 | MTR_2g016050 | 37.445 | 227 | 137 | 3 | 4 | 228 | 2 | 225 | 2.35e-46 | 154 |
MS.gene039040.t1 | MTR_1g022410 | 35.111 | 225 | 141 | 3 | 1 | 222 | 1 | 223 | 1.79e-41 | 143 |
MS.gene039040.t1 | MTR_6g024135 | 36.612 | 183 | 116 | 0 | 6 | 188 | 8 | 190 | 4.38e-39 | 135 |
MS.gene039040.t1 | MTR_4g012740 | 28.409 | 264 | 144 | 6 | 1 | 222 | 232 | 492 | 2.81e-26 | 106 |
MS.gene039040.t1 | MTR_4g057090 | 29.032 | 217 | 142 | 7 | 9 | 218 | 91 | 302 | 8.63e-16 | 75.5 |
MS.gene039040.t1 | MTR_6g013300 | 28.571 | 189 | 123 | 4 | 32 | 214 | 136 | 318 | 9.07e-14 | 69.7 |
MS.gene039040.t1 | MTR_3g113730 | 32.692 | 104 | 67 | 2 | 122 | 222 | 6 | 109 | 4.74e-13 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039040.t1 | AT1G16470 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.50e-164 | 452 |
MS.gene039040.t1 | AT1G16470 | 94.043 | 235 | 14 | 0 | 1 | 235 | 1 | 235 | 5.50e-164 | 452 |
MS.gene039040.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
MS.gene039040.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
MS.gene039040.t1 | AT1G79210 | 93.191 | 235 | 16 | 0 | 1 | 235 | 1 | 235 | 1.03e-162 | 449 |
MS.gene039040.t1 | AT5G66140 | 39.035 | 228 | 133 | 4 | 4 | 228 | 2 | 226 | 3.83e-50 | 164 |
MS.gene039040.t1 | AT3G51260 | 38.596 | 228 | 134 | 4 | 4 | 228 | 2 | 226 | 8.88e-49 | 160 |
MS.gene039040.t1 | AT3G51260 | 39.623 | 212 | 123 | 3 | 4 | 213 | 2 | 210 | 1.60e-48 | 160 |
MS.gene039040.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.62e-47 | 157 |
MS.gene039040.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.62e-47 | 157 |
MS.gene039040.t1 | AT3G14290 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 3.49e-47 | 156 |
MS.gene039040.t1 | AT5G35590 | 37.229 | 231 | 140 | 4 | 6 | 231 | 9 | 239 | 3.74e-47 | 156 |
MS.gene039040.t1 | AT3G22110 | 36.245 | 229 | 136 | 4 | 5 | 230 | 4 | 225 | 2.25e-46 | 154 |
MS.gene039040.t1 | AT2G05840 | 35.931 | 231 | 143 | 4 | 6 | 231 | 9 | 239 | 1.90e-44 | 149 |
MS.gene039040.t1 | AT5G42790 | 36.444 | 225 | 138 | 3 | 1 | 222 | 1 | 223 | 3.01e-42 | 145 |
MS.gene039040.t1 | AT1G47250 | 34.034 | 238 | 152 | 3 | 1 | 235 | 1 | 236 | 1.72e-40 | 140 |
MS.gene039040.t1 | AT2G05840 | 34.928 | 209 | 132 | 3 | 6 | 210 | 9 | 217 | 1.95e-38 | 133 |
MS.gene039040.t1 | AT2G27020 | 32.710 | 214 | 143 | 1 | 6 | 218 | 8 | 221 | 3.07e-36 | 128 |
MS.gene039040.t1 | AT2G05840 | 35.955 | 178 | 112 | 2 | 6 | 181 | 9 | 186 | 4.45e-35 | 124 |
MS.gene039040.t1 | AT2G27020 | 32.710 | 214 | 143 | 1 | 6 | 218 | 110 | 323 | 5.35e-35 | 127 |
MS.gene039040.t1 | AT4G15165 | 26.754 | 228 | 117 | 4 | 5 | 230 | 4 | 183 | 3.36e-23 | 93.6 |
Find 51 sgRNAs with CRISPR-Local
Find 392 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCTGAAATTGATGATTATT+TGG | 0.158426 | 2.2:-24189655 | MS.gene039040:CDS |
GGAGTGTCCCTGCTTGTTGC+TGG | 0.253157 | 2.2:-24191691 | MS.gene039040:CDS |
GCTTTAACTGCTGTTGGTTC+TGG | 0.266268 | 2.2:-24195655 | MS.gene039040:CDS |
GGGTCCTGATTTCCGAGTTT+TGG | 0.297847 | 2.2:-24192959 | MS.gene039040:CDS |
CTGTATACAACACCTATATT+TGG | 0.326037 | 2.2:+24193647 | None:intergenic |
CCCTTCCTTCAGTGTCAATA+TGG | 0.330202 | 2.2:+24191169 | None:intergenic |
GAAGAAACTGCCATCTATAT+TGG | 0.337394 | 2.2:-24194120 | MS.gene039040:CDS |
GATAGTGGTGTTAGGCCATT+TGG | 0.346954 | 2.2:-24191712 | MS.gene039040:intron |
GTTGCTGGGTTTGATGATAA+TGG | 0.347033 | 2.2:-24191676 | MS.gene039040:CDS |
ATGCAGGAATTTACTCAGTC+TGG | 0.352073 | 2.2:-24192408 | MS.gene039040:CDS |
TTTGCCCTGATAGTGGTGTT+AGG | 0.363096 | 2.2:-24191720 | MS.gene039040:intron |
AACATTGAAATCGGCATCAT+TGG | 0.369450 | 2.2:-24190598 | MS.gene039040:CDS |
TTGTAGATACACTGATGATA+TGG | 0.375486 | 2.2:-24191216 | MS.gene039040:intron |
CGAACCAAAACTCGGAAATC+AGG | 0.376290 | 2.2:+24192955 | None:intergenic |
CAAATATAGGTGTTGTATAC+AGG | 0.377485 | 2.2:-24193646 | MS.gene039040:intron |
GCAGTATCACCGATTGTATA+AGG | 0.400018 | 2.2:-24192911 | MS.gene039040:intron |
GCTGAAATTGATGATTATTT+GGG | 0.402207 | 2.2:-24189654 | MS.gene039040:CDS |
TTGGCATTTCCCAGGTTTGA+GGG | 0.418418 | 2.2:-24190637 | MS.gene039040:intron |
TAATGGACCACAACTATATC+AGG | 0.419917 | 2.2:-24191659 | MS.gene039040:intron |
TTGCTGTAGGTGGATCCATC+AGG | 0.428961 | 2.2:-24191502 | MS.gene039040:intron |
GAGTGTCCCTGCTTGTTGCT+GGG | 0.436297 | 2.2:-24191690 | MS.gene039040:CDS |
TTGGTTCTTGCAGCTGCAAA+TGG | 0.438100 | 2.2:-24194161 | MS.gene039040:intron |
GCTTCATCAACCAATATAGA+TGG | 0.444983 | 2.2:+24194110 | None:intergenic |
CAGTTATTAACACCAAATAT+AGG | 0.451124 | 2.2:-24193659 | MS.gene039040:CDS |
TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 2.2:-24191469 | MS.gene039040:CDS |
ACAAGTTGAGTGACAGGGAT+TGG | 0.466755 | 2.2:+24192450 | None:intergenic |
TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 2.2:-24191470 | MS.gene039040:CDS |
GAACATGCTTTAACTGCTGT+TGG | 0.482096 | 2.2:-24195661 | MS.gene039040:CDS |
TCCCTCACAAGTTGAGTGAC+AGG | 0.493790 | 2.2:+24192444 | None:intergenic |
GTTGGCATTTCCCAGGTTTG+AGG | 0.504319 | 2.2:-24190638 | MS.gene039040:intron |
CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 2.2:-24191429 | MS.gene039040:intron |
CATCAAACCCAGCAACAAGC+AGG | 0.525359 | 2.2:+24191683 | None:intergenic |
GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 2.2:-24195640 | MS.gene039040:CDS |
CAAACTTCTCTCGGTATCAA+AGG | 0.527227 | 2.2:-24195631 | MS.gene039040:intron |
TATGGTGTACCTTATACAAT+CGG | 0.527859 | 2.2:+24192902 | None:intergenic |
CCCTGTCACTCAACTTGTGA+GGG | 0.529229 | 2.2:-24192445 | MS.gene039040:CDS |
AAATAATCATCAATTTCAGC+TGG | 0.537679 | 2.2:+24189657 | None:intergenic |
TGCAGGAATTTACTCAGTCT+GGG | 0.542143 | 2.2:-24192407 | MS.gene039040:intron |
GCCATATTGACACTGAAGGA+AGG | 0.565690 | 2.2:-24191170 | MS.gene039040:CDS |
ACAAGCAGGGACACTCCAAA+TGG | 0.570540 | 2.2:+24191697 | None:intergenic |
CCCTCACAAGTTGAGTGACA+GGG | 0.583404 | 2.2:+24192445 | None:intergenic |
GGAAGTTGCTGCTGTCATGC+AGG | 0.583748 | 2.2:-24192424 | MS.gene039040:CDS |
TGCCATACCTGATATAGTTG+TGG | 0.596286 | 2.2:+24191652 | None:intergenic |
ATCAAACCCAGCAACAAGCA+GGG | 0.606489 | 2.2:+24191684 | None:intergenic |
TCCCTGTCACTCAACTTGTG+AGG | 0.608754 | 2.2:-24192446 | MS.gene039040:CDS |
CCATATTGACACTGAAGGAA+GGG | 0.609464 | 2.2:-24191169 | MS.gene039040:intron |
CACAGCCATATTGACACTGA+AGG | 0.611228 | 2.2:-24191174 | MS.gene039040:CDS |
CTTGGAAAGCTTCTGCTATG+GGG | 0.618178 | 2.2:-24191468 | MS.gene039040:CDS |
ATCTGAACAAGCTTACCAGA+AGG | 0.620962 | 2.2:+24195685 | None:intergenic |
AGATGGCAGTTTCTTCTCTG+TGG | 0.628548 | 2.2:+24194127 | None:intergenic |
TCAGTGTCAATATGGCTGTG+TGG | 0.671904 | 2.2:+24191177 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATATTTTATATATATTTT+TGG | - | chr2.2:24190233-24190252 | MS.gene039040:intron | 0.0% |
!! | AAATAAACAAAAATTAGATA+AGG | + | chr2.2:24191423-24191442 | None:intergenic | 10.0% |
!! | AATATTCAAATGATAATAAA+GGG | + | chr2.2:24193616-24193635 | None:intergenic | 10.0% |
!! | TAATATTCAAATGATAATAA+AGG | + | chr2.2:24193617-24193636 | None:intergenic | 10.0% |
!! | TTTGTAACTATATATATATT+CGG | - | chr2.2:24191165-24191184 | MS.gene039040:intron | 10.0% |
!!! | TAAATATGATATTTTCATTA+AGG | + | chr2.2:24194261-24194280 | None:intergenic | 10.0% |
!!! | TATCTAATTTTTGTTTATTT+TGG | - | chr2.2:24191423-24191442 | MS.gene039040:intron | 10.0% |
!!! | TTTATTTTATTTTTTGTGAT+GGG | + | chr2.2:24193093-24193112 | None:intergenic | 10.0% |
!!! | TTTTATTTTATTTTTTGTGA+TGG | + | chr2.2:24193094-24193113 | None:intergenic | 10.0% |
!!! | TTTTTTTGTAACTATATTTT+TGG | - | chr2.2:24191188-24191207 | MS.gene039040:CDS | 10.0% |
!! | AAACACAAATAAAAAGTAAA+CGG | + | chr2.2:24192744-24192763 | None:intergenic | 15.0% |
!! | AAATAAACAAATACTGAAAA+GGG | + | chr2.2:24194871-24194890 | None:intergenic | 15.0% |
!! | AAGGAAAAAGAAATTATTTA+AGG | + | chr2.2:24192709-24192728 | None:intergenic | 15.0% |
!! | ATATATGTTGCATAATTTAA+AGG | + | chr2.2:24195412-24195431 | None:intergenic | 15.0% |
!! | ATATTCAAATGATAATAAAG+GGG | + | chr2.2:24193615-24193634 | None:intergenic | 15.0% |
!! | ATTACATTAATCTCTAATAA+TGG | + | chr2.2:24194045-24194064 | None:intergenic | 15.0% |
!!! | AATTAAAAGGTATAAATTTG+AGG | - | chr2.2:24194966-24194985 | MS.gene039040:intron | 15.0% |
!!! | ATAAAATTTTGTTCTATCAA+TGG | + | chr2.2:24191554-24191573 | None:intergenic | 15.0% |
!!! | TATGCAACATATATTTTTAA+TGG | - | chr2.2:24195418-24195437 | MS.gene039040:intron | 15.0% |
!!! | TTTATCGTTTAAATTTTACT+TGG | - | chr2.2:24192593-24192612 | MS.gene039040:intron | 15.0% |
!!! | TTTTATTTAGTTTTTGTTGT+CGG | - | chr2.2:24190041-24190060 | MS.gene039040:intron | 15.0% |
!!! | TTTTTTTTCTTATTTTTTGC+TGG | - | chr2.2:24195583-24195602 | MS.gene039040:intron | 15.0% |
!! | AAATTTCTTATTAGTGATCT+TGG | - | chr2.2:24194482-24194501 | MS.gene039040:intron | 20.0% |
!! | AATAAACAAATACTGAAAAG+GGG | + | chr2.2:24194870-24194889 | None:intergenic | 20.0% |
!! | AGTTACTGAAATGAATATTA+TGG | - | chr2.2:24195019-24195038 | MS.gene039040:intron | 20.0% |
!! | ATAACATAAACTTATATGCT+GGG | + | chr2.2:24193053-24193072 | None:intergenic | 20.0% |
!! | ATCCAATCTGAATAATTAAA+AGG | - | chr2.2:24194953-24194972 | MS.gene039040:intron | 20.0% |
!! | CAAATAAACAAATACTGAAA+AGG | + | chr2.2:24194872-24194891 | None:intergenic | 20.0% |
!! | CATGTTTCAGAATTATAAAA+TGG | - | chr2.2:24194381-24194400 | MS.gene039040:intron | 20.0% |
!! | CCAAAAGAAAAAAAAATATC+CGG | - | chr2.2:24194676-24194695 | MS.gene039040:intron | 20.0% |
!! | CTATGCTAAAACTAAAATAT+GGG | - | chr2.2:24190603-24190622 | MS.gene039040:CDS | 20.0% |
!! | GAAAAGAATTAAAAAGAAAG+AGG | + | chr2.2:24194649-24194668 | None:intergenic | 20.0% |
!! | TCTATGCTAAAACTAAAATA+TGG | - | chr2.2:24190602-24190621 | MS.gene039040:CDS | 20.0% |
!!! | AAGTTTGAAATGAGTTTAAA+AGG | - | chr2.2:24193357-24193376 | MS.gene039040:intron | 20.0% |
!!! | AATTTTTAGCTCAATTTGAT+CGG | + | chr2.2:24194921-24194940 | None:intergenic | 20.0% |
!!! | AGTTTGTTAATTATATTGCA+GGG | - | chr2.2:24195680-24195699 | MS.gene039040:CDS | 20.0% |
!!! | ATAATTTCTTTTTCCTTTTC+TGG | - | chr2.2:24192712-24192731 | MS.gene039040:intron | 20.0% |
!!! | ATCAGAGTCTTAATATTTTT+GGG | + | chr2.2:24195501-24195520 | None:intergenic | 20.0% |
!!! | CATTTTATAATTCTGAAACA+TGG | + | chr2.2:24194383-24194402 | None:intergenic | 20.0% |
!!! | GTGTTAATAACTGAATTTTT+TGG | + | chr2.2:24191702-24191721 | None:intergenic | 20.0% |
!!! | TAAAGTTACTGTACTTTTAA+GGG | - | chr2.2:24193815-24193834 | MS.gene039040:intron | 20.0% |
!!! | TACCTTTTAATTATTCAGAT+TGG | + | chr2.2:24194958-24194977 | None:intergenic | 20.0% |
!!! | TAGTTTGTTAATTATATTGC+AGG | - | chr2.2:24195679-24195698 | MS.gene039040:CDS | 20.0% |
!!! | TATCTTTTGGTTTTCTATTA+TGG | - | chr2.2:24192844-24192863 | MS.gene039040:intron | 20.0% |
!!! | TTAAAGTTACTGTACTTTTA+AGG | - | chr2.2:24193814-24193833 | MS.gene039040:intron | 20.0% |
!!! | TTAATTTTTATGCAACTGTT+GGG | - | chr2.2:24193456-24193475 | MS.gene039040:intron | 20.0% |
!!! | TTCGTTGCATTTTATATTTA+GGG | + | chr2.2:24193533-24193552 | None:intergenic | 20.0% |
!!! | TTTAATTCTTAGAGTTGATT+AGG | - | chr2.2:24194277-24194296 | MS.gene039040:intron | 20.0% |
!!! | TTTATTTAGTTTTTGTTGTC+GGG | - | chr2.2:24190042-24190061 | MS.gene039040:intron | 20.0% |
! | AAACAAAAAAATGGCAATGA+AGG | + | chr2.2:24194626-24194645 | None:intergenic | 25.0% |
! | AAATAATCATCAATTTCAGC+TGG | + | chr2.2:24195714-24195733 | None:intergenic | 25.0% |
! | AACAAAAAAATGGCAATGAA+GGG | + | chr2.2:24194625-24194644 | None:intergenic | 25.0% |
! | AACAAATCCACAAATCAAAT+CGG | - | chr2.2:24190666-24190685 | MS.gene039040:intron | 25.0% |
! | AACTATTAAGTTACCAAATC+AGG | + | chr2.2:24195664-24195683 | None:intergenic | 25.0% |
! | ACAAATTGCAGAAATAATAG+AGG | + | chr2.2:24191075-24191094 | None:intergenic | 25.0% |
! | AGAAAGAGGAAACAAAAAAA+TGG | + | chr2.2:24194635-24194654 | None:intergenic | 25.0% |
! | AGAAATAAACACACAAAAAC+TGG | + | chr2.2:24194313-24194332 | None:intergenic | 25.0% |
! | AGAGGATATTTGCAAATAAA+TGG | + | chr2.2:24191057-24191076 | None:intergenic | 25.0% |
! | AGCTATTAAAATTGTTGCAT+AGG | - | chr2.2:24190540-24190559 | MS.gene039040:intron | 25.0% |
! | ATAAACAAATACTGAAAAGG+GGG | + | chr2.2:24194869-24194888 | None:intergenic | 25.0% |
! | ATACAGAAAATCAACAATAC+AGG | + | chr2.2:24189878-24189897 | None:intergenic | 25.0% |
! | ATATTAATCTACCTGTTCAT+TGG | + | chr2.2:24190498-24190517 | None:intergenic | 25.0% |
! | ATTCTAGATTTCATACATTC+TGG | - | chr2.2:24191644-24191663 | MS.gene039040:intron | 25.0% |
! | CAAAGAATAAACTATTCAGA+CGG | + | chr2.2:24190322-24190341 | None:intergenic | 25.0% |
! | CAGTTATTAACACCAAATAT+AGG | - | chr2.2:24191709-24191728 | MS.gene039040:CDS | 25.0% |
! | CATAACATAAACTTATATGC+TGG | + | chr2.2:24193054-24193073 | None:intergenic | 25.0% |
! | CGATTATCATCATATGTTAA+GGG | - | chr2.2:24193334-24193353 | MS.gene039040:intron | 25.0% |
! | CTATTAAAATTGTTGCATAG+GGG | - | chr2.2:24190542-24190561 | MS.gene039040:intron | 25.0% |
! | GAACAGGTAGAATTAAAAAT+GGG | + | chr2.2:24190450-24190469 | None:intergenic | 25.0% |
! | GAATATTGCAATACATAGTA+TGG | + | chr2.2:24192487-24192506 | None:intergenic | 25.0% |
! | GAATCATATAGACCAAATAT+AGG | + | chr2.2:24192525-24192544 | None:intergenic | 25.0% |
! | GCTATTAAAATTGTTGCATA+GGG | - | chr2.2:24190541-24190560 | MS.gene039040:intron | 25.0% |
! | GGGATTTAGATTGTAAATTT+CGG | - | chr2.2:24189927-24189946 | MS.gene039040:intron | 25.0% |
! | GTGATATTTGCTTCATATTA+TGG | - | chr2.2:24191818-24191837 | MS.gene039040:intron | 25.0% |
! | GTTGTTACTGCTATTATATA+GGG | - | chr2.2:24190263-24190282 | MS.gene039040:intron | 25.0% |
! | GTTTATCTAATAATCCTTCT+CGG | - | chr2.2:24191445-24191464 | MS.gene039040:CDS | 25.0% |
! | TAAGTTCAAACATGTTTGTA+TGG | - | chr2.2:24191775-24191794 | MS.gene039040:intron | 25.0% |
! | TAATAGCTACAGATTTGAAT+TGG | + | chr2.2:24190528-24190547 | None:intergenic | 25.0% |
! | TATTAATCTACCTGTTCATT+GGG | + | chr2.2:24190497-24190516 | None:intergenic | 25.0% |
! | TATTTGAACTTTGTATCATC+TGG | - | chr2.2:24194886-24194905 | MS.gene039040:intron | 25.0% |
! | TCAATAGTTTATCTCTTACA+GGG | + | chr2.2:24192221-24192240 | None:intergenic | 25.0% |
! | TCAGCAAAAAACATTGAAAT+CGG | - | chr2.2:24194761-24194780 | MS.gene039040:intron | 25.0% |
! | TCGATTATCATCATATGTTA+AGG | - | chr2.2:24193333-24193352 | MS.gene039040:intron | 25.0% |
! | TGAACAGGTAGAATTAAAAA+TGG | + | chr2.2:24190451-24190470 | None:intergenic | 25.0% |
! | TGAGCTAAAAATTATGCTAT+GGG | - | chr2.2:24194928-24194947 | MS.gene039040:intron | 25.0% |
! | TGTTGTTACTGCTATTATAT+AGG | - | chr2.2:24190262-24190281 | MS.gene039040:intron | 25.0% |
! | TTAACATATGATGATAATCG+AGG | + | chr2.2:24193334-24193353 | None:intergenic | 25.0% |
! | TTACAAGCAATAGGAAATAA+AGG | + | chr2.2:24192647-24192666 | None:intergenic | 25.0% |
! | TTAGTTTCAAAGACTAACAA+AGG | + | chr2.2:24194702-24194721 | None:intergenic | 25.0% |
! | TTATATTTAGGGGTTCATTA+TGG | + | chr2.2:24193522-24193541 | None:intergenic | 25.0% |
! | TTCAATAGTTTATCTCTTAC+AGG | + | chr2.2:24192222-24192241 | None:intergenic | 25.0% |
! | TTGAGCTAAAAATTATGCTA+TGG | - | chr2.2:24194927-24194946 | MS.gene039040:intron | 25.0% |
! | TTGTGTGTATAAAAAAGAGT+CGG | + | chr2.2:24193570-24193589 | None:intergenic | 25.0% |
! | TTGTTCCCTAAAATATACTT+TGG | - | chr2.2:24194821-24194840 | MS.gene039040:intron | 25.0% |
! | TTTAATGCATAAACGTTACA+CGG | + | chr2.2:24194235-24194254 | None:intergenic | 25.0% |
!! | AATGAAAACACTCTTGATTT+TGG | + | chr2.2:24190123-24190142 | None:intergenic | 25.0% |
!! | AGCTGAAATTGATGATTATT+TGG | - | chr2.2:24195713-24195732 | MS.gene039040:CDS | 25.0% |
!! | ATTAATGATGGCAATGTTTT+AGG | - | chr2.2:24193973-24193992 | MS.gene039040:intron | 25.0% |
!! | GAAGAAACATTTTGCTTAAA+CGG | + | chr2.2:24194336-24194355 | None:intergenic | 25.0% |
!! | GATAAACATTTTGTTCCTAT+TGG | - | chr2.2:24193492-24193511 | MS.gene039040:intron | 25.0% |
!! | GATCAGAGTCTTAATATTTT+TGG | + | chr2.2:24195502-24195521 | None:intergenic | 25.0% |
!! | GCTGAAATTGATGATTATTT+GGG | - | chr2.2:24195714-24195733 | MS.gene039040:CDS | 25.0% |
!! | GTTAATTTTTATGCAACTGT+TGG | - | chr2.2:24193455-24193474 | MS.gene039040:intron | 25.0% |
!! | GTTCGTTGCATTTTATATTT+AGG | + | chr2.2:24193534-24193553 | None:intergenic | 25.0% |
!! | TCGTTGCATTTTATATTTAG+GGG | + | chr2.2:24193532-24193551 | None:intergenic | 25.0% |
!! | TCTTTCATTTCATTTTGTCT+GGG | + | chr2.2:24191909-24191928 | None:intergenic | 25.0% |
!! | TTCTTTCATTTCATTTTGTC+TGG | + | chr2.2:24191910-24191929 | None:intergenic | 25.0% |
!! | TTGATTTCGGTAATTGATTT+CGG | - | chr2.2:24190694-24190713 | MS.gene039040:intron | 25.0% |
!! | TTGTCTTTTCTGTTATCTTT+TGG | - | chr2.2:24192831-24192850 | MS.gene039040:intron | 25.0% |
!!! | AACTTTGAAAAGCATCAAAA+TGG | + | chr2.2:24193258-24193277 | None:intergenic | 25.0% |
!!! | ACTTTGAAAAGCATCAAAAT+GGG | + | chr2.2:24193257-24193276 | None:intergenic | 25.0% |
!!! | ATTTTATTTTTTGTGATGGG+AGG | + | chr2.2:24193090-24193109 | None:intergenic | 25.0% |
!!! | CCGGATATTTTTTTTTCTTT+TGG | + | chr2.2:24194679-24194698 | None:intergenic | 25.0% |
!!! | GCAACATATATTTTTAATGG+AGG | - | chr2.2:24195421-24195440 | MS.gene039040:intron | 25.0% |
!!! | GTGATGGGTTATATAAATAT+GGG | + | chr2.2:24192079-24192098 | None:intergenic | 25.0% |
!!! | TCAATTTTGTTTTTGTTCAG+TGG | - | chr2.2:24192383-24192402 | MS.gene039040:intron | 25.0% |
!!! | TGATGGGTTATATAAATATG+GGG | + | chr2.2:24192078-24192097 | None:intergenic | 25.0% |
!!! | TTTCTAACTTTGATTTTGTG+TGG | - | chr2.2:24191102-24191121 | MS.gene039040:intron | 25.0% |
!!! | TTTGTTTTGAATACCTGATT+TGG | - | chr2.2:24195648-24195667 | MS.gene039040:CDS | 25.0% |
!!! | TTTTATTTTTTGTGATGGGA+GGG | + | chr2.2:24193089-24193108 | None:intergenic | 25.0% |
!!! | TTTTCTTATTTTTTGCTGGT+GGG | - | chr2.2:24195587-24195606 | MS.gene039040:intron | 25.0% |
!!! | TTTTGTTTTACCAATGCAAA+TGG | - | chr2.2:24195528-24195547 | MS.gene039040:intron | 25.0% |
!!! | TTTTTCCTTATTAGAAGCAT+GGG | - | chr2.2:24190769-24190788 | MS.gene039040:intron | 25.0% |
!!! | TTTTTCTTATTTTTTGCTGG+TGG | - | chr2.2:24195586-24195605 | MS.gene039040:intron | 25.0% |
AAACAAAAACTTGAGCTTAC+TGG | + | chr2.2:24195635-24195654 | None:intergenic | 30.0% | |
AAATACACGTTCTTTCAGAA+AGG | + | chr2.2:24193411-24193430 | None:intergenic | 30.0% | |
AAGATAACAGAAAAGACAAC+TGG | + | chr2.2:24192830-24192849 | None:intergenic | 30.0% | |
AAGGATGCTGAGTAATTTAA+AGG | + | chr2.2:24191404-24191423 | None:intergenic | 30.0% | |
AATAAGAACCCTAAAACATG+TGG | + | chr2.2:24189809-24189828 | None:intergenic | 30.0% | |
AATATCAAATTCCGAAGTAC+AGG | + | chr2.2:24192564-24192583 | None:intergenic | 30.0% | |
AATGAAAATGCACCTAAGAT+TGG | - | chr2.2:24194406-24194425 | MS.gene039040:intron | 30.0% | |
AATGGAGGCTAATTAAAATC+AGG | - | chr2.2:24195436-24195455 | MS.gene039040:intron | 30.0% | |
AATGGGTACTTCATATTGAT+TGG | + | chr2.2:24193240-24193259 | None:intergenic | 30.0% | |
AATTGGATACAATCTTGAAG+TGG | + | chr2.2:24191355-24191374 | None:intergenic | 30.0% | |
ACATAGCTGAATTATATCCA+AGG | - | chr2.2:24191977-24191996 | MS.gene039040:intron | 30.0% | |
ACATGGTTACAAACTTAAAG+TGG | + | chr2.2:24195276-24195295 | None:intergenic | 30.0% | |
AGAAATGTAATCGCAGAAAT+CGG | + | chr2.2:24190202-24190221 | None:intergenic | 30.0% | |
AGGATGCTGAGTAATTTAAA+GGG | + | chr2.2:24191403-24191422 | None:intergenic | 30.0% | |
ATAAATATGGGGAATCAGTT+TGG | + | chr2.2:24192067-24192086 | None:intergenic | 30.0% | |
ATACTGTAAGTGAAAATTGC+AGG | - | chr2.2:24192893-24192912 | MS.gene039040:intron | 30.0% | |
ATCATCAGTGTATCTACAAT+TGG | + | chr2.2:24194151-24194170 | None:intergenic | 30.0% | |
ATGATAATAAAGGGGAGAAA+TGG | + | chr2.2:24193607-24193626 | None:intergenic | 30.0% | |
ATGCTTCAGTACTATCATAT+TGG | - | chr2.2:24191001-24191020 | MS.gene039040:intron | 30.0% | |
ATTCTGTGAAAACTGTTTCA+AGG | + | chr2.2:24192139-24192158 | None:intergenic | 30.0% | |
ATTTACATTGTTCGACAAAC+TGG | - | chr2.2:24195473-24195492 | MS.gene039040:intron | 30.0% | |
CAAGAAAAATATGAACCTGA+TGG | + | chr2.2:24193884-24193903 | None:intergenic | 30.0% | |
CATAGCTGAATTATATCCAA+GGG | - | chr2.2:24191978-24191997 | MS.gene039040:intron | 30.0% | |
CCTAAAACATGTGGAAAAAA+GGG | + | chr2.2:24189800-24189819 | None:intergenic | 30.0% | |
CTGTATACAACACCTATATT+TGG | + | chr2.2:24191724-24191743 | None:intergenic | 30.0% | |
CTTCAAGATTGTATCCAATT+TGG | - | chr2.2:24191355-24191374 | MS.gene039040:intron | 30.0% | |
GAAAGTGAAAACCACAAAAT+TGG | + | chr2.2:24195157-24195176 | None:intergenic | 30.0% | |
GCAATAGGAAATAAAGGAAT+AGG | + | chr2.2:24192641-24192660 | None:intergenic | 30.0% | |
GCTGTGAAGTTATAAATTCT+TGG | - | chr2.2:24195184-24195203 | MS.gene039040:intron | 30.0% | |
GGTTCAACTGAAAAATATTG+AGG | - | chr2.2:24194435-24194454 | MS.gene039040:intron | 30.0% | |
GTATGCTTTCACATTAATGA+TGG | - | chr2.2:24193961-24193980 | MS.gene039040:intron | 30.0% | |
GTTCATTATGGAATTCCAAT+AGG | + | chr2.2:24193510-24193529 | None:intergenic | 30.0% | |
TAAAATGCAACGAACTTAGT+TGG | - | chr2.2:24193539-24193558 | MS.gene039040:intron | 30.0% | |
TATCTACAATTGGACAATCA+AGG | + | chr2.2:24194141-24194160 | None:intergenic | 30.0% | |
TATGGTGTACCTTATACAAT+CGG | + | chr2.2:24192469-24192488 | None:intergenic | 30.0% | |
TGAATATGTTCTTAAACACG+AGG | - | chr2.2:24191859-24191878 | MS.gene039040:intron | 30.0% | |
TGATACATTACTAGGGTTTA+GGG | - | chr2.2:24189907-24189926 | MS.gene039040:intron | 30.0% | |
TGATGTAAATATCTTGTCTG+TGG | - | chr2.2:24190340-24190359 | MS.gene039040:intron | 30.0% | |
TGTAACTCATTACAAGCAAT+AGG | + | chr2.2:24192656-24192675 | None:intergenic | 30.0% | |
TGTACTTCGGAATTTGATAT+TGG | - | chr2.2:24192563-24192582 | MS.gene039040:intron | 30.0% | |
TTCGGAATTTGATATTGGAA+TGG | - | chr2.2:24192568-24192587 | MS.gene039040:intron | 30.0% | |
TTCTTATATCGTGATAGTTG+AGG | - | chr2.2:24191504-24191523 | MS.gene039040:intron | 30.0% | |
TTGTAGATACACTGATGATA+TGG | - | chr2.2:24194152-24194171 | MS.gene039040:intron | 30.0% | |
TTTATCATACACTAACTGAC+AGG | + | chr2.2:24194358-24194377 | None:intergenic | 30.0% | |
! | AACTTGTTCATATTGCACAT+AGG | - | chr2.2:24191027-24191046 | MS.gene039040:intron | 30.0% |
! | AGGTATAAATTTGAGGCATA+TGG | - | chr2.2:24194973-24194992 | MS.gene039040:intron | 30.0% |
! | AGTCAGCCAAAGTATATTTT+AGG | + | chr2.2:24194830-24194849 | None:intergenic | 30.0% |
! | AGTTCAAGTTTCATCATCAT+CGG | + | chr2.2:24190292-24190311 | None:intergenic | 30.0% |
! | CAAATATAGGTGTTGTATAC+AGG | - | chr2.2:24191722-24191741 | MS.gene039040:intron | 30.0% |
! | CATCAGGTTCATATTTTTCT+TGG | - | chr2.2:24193882-24193901 | MS.gene039040:intron | 30.0% |
! | CTTTTTCCTTATTAGAAGCA+TGG | - | chr2.2:24190768-24190787 | MS.gene039040:intron | 30.0% |
! | GGTATAAATTTGAGGCATAT+GGG | - | chr2.2:24194974-24194993 | MS.gene039040:intron | 30.0% |
! | GTCAGCCAAAGTATATTTTA+GGG | + | chr2.2:24194829-24194848 | None:intergenic | 30.0% |
! | TTCTGAAAGAACGTGTATTT+GGG | - | chr2.2:24193411-24193430 | MS.gene039040:intron | 30.0% |
! | TTGAAACTAATCCCTTTTGT+TGG | - | chr2.2:24194712-24194731 | MS.gene039040:intron | 30.0% |
! | TTGATGCTTTTCAAAGTTGA+TGG | - | chr2.2:24193260-24193279 | MS.gene039040:intron | 30.0% |
! | TTTCTGAAAGAACGTGTATT+TGG | - | chr2.2:24193410-24193429 | MS.gene039040:intron | 30.0% |
! | TTTGTTATACATTTGCACCA+TGG | - | chr2.2:24195046-24195065 | MS.gene039040:intron | 30.0% |
!! | CAATGTTTTAGGCAAATATG+CGG | - | chr2.2:24193984-24194003 | MS.gene039040:intron | 30.0% |
!! | CATTTGTTTCGCATTTTGAT+AGG | - | chr2.2:24190139-24190158 | MS.gene039040:intron | 30.0% |
!! | GGTGATGGGTTATATAAATA+TGG | + | chr2.2:24192080-24192099 | None:intergenic | 30.0% |
!! | TACTTTTAAGGGAAAGAGAA+GGG | - | chr2.2:24193826-24193845 | MS.gene039040:intron | 30.0% |
!!! | CCTTTTTTCCACATGTTTTA+GGG | - | chr2.2:24189798-24189817 | MS.gene039040:intron | 30.0% |
!!! | TCAGTAAGTTGCTTTTTCTT+TGG | - | chr2.2:24191282-24191301 | MS.gene039040:intron | 30.0% |
!!! | TTTCTTATTTTTTGCTGGTG+GGG | - | chr2.2:24195588-24195607 | MS.gene039040:intron | 30.0% |
AAACATGTGGAAAAAAGGGT+TGG | + | chr2.2:24189796-24189815 | None:intergenic | 35.0% | |
AAAGCTTAGATCAAGTCCTT+TGG | - | chr2.2:24195073-24195092 | MS.gene039040:intron | 35.0% | |
AAATCCACAAATCAAATCGG+TGG | - | chr2.2:24190669-24190688 | MS.gene039040:intron | 35.0% | |
AACATTGAAATCGGCATCAT+TGG | - | chr2.2:24194770-24194789 | MS.gene039040:intron | 35.0% | |
AACCCTAGTAATGTATCAGT+CGG | + | chr2.2:24189905-24189924 | None:intergenic | 35.0% | |
AAGCTTAGATCAAGTCCTTT+GGG | - | chr2.2:24195074-24195093 | MS.gene039040:intron | 35.0% | |
ACTATATCAGGTATGGCATA+TGG | - | chr2.2:24193721-24193740 | MS.gene039040:intron | 35.0% | |
AGAGAAATAACGTGTAATCC+AGG | - | chr2.2:24193127-24193146 | MS.gene039040:intron | 35.0% | |
AGAGTTTGTAAACGAAAGGA+GGG | + | chr2.2:24192023-24192042 | None:intergenic | 35.0% | |
ATGAATTGATAGAGATGTCG+AGG | + | chr2.2:24194111-24194130 | None:intergenic | 35.0% | |
ATGACAAGATACAAGATGGA+GGG | + | chr2.2:24195350-24195369 | None:intergenic | 35.0% | |
CAACAGCAATGGAAAAAAGT+AGG | + | chr2.2:24192298-24192317 | None:intergenic | 35.0% | |
CAATGTTGTAACCTGTACTT+CGG | - | chr2.2:24192550-24192569 | MS.gene039040:intron | 35.0% | |
CATGATGACAAGATACAAGA+TGG | + | chr2.2:24195354-24195373 | None:intergenic | 35.0% | |
CCCTAAAACATGTGGAAAAA+AGG | + | chr2.2:24189801-24189820 | None:intergenic | 35.0% | |
CGGTAATTGATACACTACTA+GGG | - | chr2.2:24189947-24189966 | MS.gene039040:intron | 35.0% | |
CTGATACATTACTAGGGTTT+AGG | - | chr2.2:24189906-24189925 | MS.gene039040:intron | 35.0% | |
CTTCATATTATGGCAGTTGA+TGG | - | chr2.2:24191828-24191847 | MS.gene039040:intron | 35.0% | |
GAAAACCACAAAATTGGACA+TGG | + | chr2.2:24195151-24195170 | None:intergenic | 35.0% | |
GAAAGAGAAGGGAAAATTGA+AGG | - | chr2.2:24193837-24193856 | MS.gene039040:intron | 35.0% | |
GAAGAAACTGCCATCTATAT+TGG | - | chr2.2:24191248-24191267 | MS.gene039040:intron | 35.0% | |
GATAAAACACCAACTTTACC+TGG | + | chr2.2:24193148-24193167 | None:intergenic | 35.0% | |
GCTTCATCAACCAATATAGA+TGG | + | chr2.2:24191261-24191280 | None:intergenic | 35.0% | |
GGATGCTGAGTAATTTAAAG+GGG | + | chr2.2:24191402-24191421 | None:intergenic | 35.0% | |
GGTTACAAACTTAAAGTGGA+GGG | + | chr2.2:24195272-24195291 | None:intergenic | 35.0% | |
GTTGAGGATACTTGAAAGTA+TGG | - | chr2.2:24191520-24191539 | MS.gene039040:intron | 35.0% | |
TATGCCCAAATAAACTCACA+AGG | + | chr2.2:24190911-24190930 | None:intergenic | 35.0% | |
TCGGTAATTGATACACTACT+AGG | - | chr2.2:24189946-24189965 | MS.gene039040:intron | 35.0% | |
TCTGAAAGAACGTGTATTTG+GGG | - | chr2.2:24193412-24193431 | MS.gene039040:intron | 35.0% | |
TCTGAGAGTTTGTAAACGAA+AGG | + | chr2.2:24192027-24192046 | None:intergenic | 35.0% | |
TGCTACTCACAAAATGCATT+GGG | + | chr2.2:24195561-24195580 | None:intergenic | 35.0% | |
TGGTCTAATCATAGCATTTC+TGG | + | chr2.2:24190103-24190122 | None:intergenic | 35.0% | |
TGGTTACAAACTTAAAGTGG+AGG | + | chr2.2:24195273-24195292 | None:intergenic | 35.0% | |
TGTGAGTTTATTTGGGCATA+TGG | - | chr2.2:24190911-24190930 | MS.gene039040:intron | 35.0% | |
TGTGCAGGATAAGTTATGTT+GGG | - | chr2.2:24190934-24190953 | MS.gene039040:intron | 35.0% | |
TGTGTATAAAAAAGAGTCGG+AGG | + | chr2.2:24193567-24193586 | None:intergenic | 35.0% | |
TTGCTACTCACAAAATGCAT+TGG | + | chr2.2:24195562-24195581 | None:intergenic | 35.0% | |
TTGTTCATATTGCACATAGG+AGG | - | chr2.2:24191030-24191049 | MS.gene039040:intron | 35.0% | |
TTGTTCTATCAATGGCCAAT+TGG | + | chr2.2:24191546-24191565 | None:intergenic | 35.0% | |
TTTCAAAGACTAACAAAGGC+CGG | + | chr2.2:24194698-24194717 | None:intergenic | 35.0% | |
TTTCCGAGTTCACTTTATCT+CGG | - | chr2.2:24190739-24190758 | MS.gene039040:intron | 35.0% | |
! | AAATTTGAGGCATATGGGTT+AGG | - | chr2.2:24194979-24194998 | MS.gene039040:intron | 35.0% |
! | ATGATTGTCATCTGATGGAT+AGG | - | chr2.2:24190836-24190855 | MS.gene039040:intron | 35.0% |
! | CAGCTCATGATGATTTTACA+GGG | + | chr2.2:24194526-24194545 | None:intergenic | 35.0% |
! | CATGATGATTTTACAGGGAT+GGG | + | chr2.2:24194521-24194540 | None:intergenic | 35.0% |
! | CTAACAACTTTTAGTCCTTC+TGG | - | chr2.2:24189668-24189687 | MS.gene039040:CDS | 35.0% |
! | GAAGCCTTGTGAGTTTATTT+GGG | - | chr2.2:24190904-24190923 | MS.gene039040:intron | 35.0% |
! | GATGATGATGAAACTTGAAC+TGG | - | chr2.2:24190291-24190310 | MS.gene039040:intron | 35.0% |
! | GTGCTATTGAAGTTTCTGTT+AGG | - | chr2.2:24191881-24191900 | MS.gene039040:intron | 35.0% |
! | TAATGGACCACAACTATATC+AGG | - | chr2.2:24193709-24193728 | MS.gene039040:intron | 35.0% |
! | TACTTGAAAGTATGGCCAAT+TGG | - | chr2.2:24191528-24191547 | MS.gene039040:intron | 35.0% |
! | TCATGATGATTTTACAGGGA+TGG | + | chr2.2:24194522-24194541 | None:intergenic | 35.0% |
! | TGAAGCCTTGTGAGTTTATT+TGG | - | chr2.2:24190903-24190922 | MS.gene039040:intron | 35.0% |
! | TGATCTAAGCTTTTTGACCA+TGG | + | chr2.2:24195066-24195085 | None:intergenic | 35.0% |
!! | CCAAAAACTCAAAGTTGATG+AGG | + | chr2.2:24193170-24193189 | None:intergenic | 35.0% |
!! | CCTCATCAACTTTGAGTTTT+TGG | - | chr2.2:24193167-24193186 | MS.gene039040:intron | 35.0% |
!! | GTACTTTTAAGGGAAAGAGA+AGG | - | chr2.2:24193825-24193844 | MS.gene039040:intron | 35.0% |
!! | TGTGTTTGATTAGTTTGCAC+TGG | - | chr2.2:24193763-24193782 | MS.gene039040:intron | 35.0% |
!! | TTATATGCTGGGAGTTGATA+TGG | + | chr2.2:24193042-24193061 | None:intergenic | 35.0% |
!!! | CCCTTTTTTCCACATGTTTT+AGG | - | chr2.2:24189797-24189816 | MS.gene039040:intron | 35.0% |
!!! | TGCTTTTTCGAACCAAAACT+CGG | + | chr2.2:24192424-24192443 | None:intergenic | 35.0% |
!!! | TTCTTTTTTTGCCCTGATAG+TGG | - | chr2.2:24193641-24193660 | MS.gene039040:intron | 35.0% |
!!! | TTGAAGGTTGTTTTTGCTGT+AGG | - | chr2.2:24193853-24193872 | MS.gene039040:intron | 35.0% |
!!! | TTGTTTTTGTTCAGTGGCAT+GGG | - | chr2.2:24192389-24192408 | MS.gene039040:intron | 35.0% |
!!! | TTTGTTTTTGTTCAGTGGCA+TGG | - | chr2.2:24192388-24192407 | MS.gene039040:intron | 35.0% |
AAACGATAGCACAGCCAAAT+TGG | + | chr2.2:24191372-24191391 | None:intergenic | 40.0% | |
AAGTTCAATCTACCACTAGG+AGG | + | chr2.2:24190814-24190833 | None:intergenic | 40.0% | |
ACGTGTAATCCAGGTAAAGT+TGG | - | chr2.2:24193136-24193155 | MS.gene039040:intron | 40.0% | |
ACTGTTTCAAGGAGTTACTC+AGG | + | chr2.2:24192128-24192147 | None:intergenic | 40.0% | |
AGACCAAATATAGGCAGAAC+AGG | + | chr2.2:24192516-24192535 | None:intergenic | 40.0% | |
AGTTCAATCTACCACTAGGA+GGG | + | chr2.2:24190813-24190832 | None:intergenic | 40.0% | |
AGTTCCTAATCCAACAAGCT+TGG | + | chr2.2:24194568-24194587 | None:intergenic | 40.0% | |
ATATCTTGTCTGTGGTACTG+AGG | - | chr2.2:24190348-24190367 | MS.gene039040:intron | 40.0% | |
ATCTGAACAAGCTTACCAGA+AGG | + | chr2.2:24189686-24189705 | None:intergenic | 40.0% | |
ATGCAGGAATTTACTCAGTC+TGG | - | chr2.2:24192960-24192979 | MS.gene039040:CDS | 40.0% | |
CAAAACCAAACAACACCCAA+AGG | + | chr2.2:24195092-24195111 | None:intergenic | 40.0% | |
CAAACTTCTCTCGGTATCAA+AGG | - | chr2.2:24189737-24189756 | MS.gene039040:intron | 40.0% | |
CACAAAATTGGACATGGTGT+TGG | + | chr2.2:24195145-24195164 | None:intergenic | 40.0% | |
CCATATTGACACTGAAGGAA+GGG | - | chr2.2:24194199-24194218 | MS.gene039040:intron | 40.0% | |
CTCTTTGTTCATATGACTGC+AGG | - | chr2.2:24191675-24191694 | MS.gene039040:CDS | 40.0% | |
CTGTTTCAAGGAGTTACTCA+GGG | + | chr2.2:24192127-24192146 | None:intergenic | 40.0% | |
CTTCCTGTTCTGCCTATATT+TGG | - | chr2.2:24192510-24192529 | MS.gene039040:intron | 40.0% | |
CTTGCATGATTGTCATCTGA+TGG | - | chr2.2:24190831-24190850 | MS.gene039040:intron | 40.0% | |
GAAAGTCCACAAACAACTTG+CGG | + | chr2.2:24191584-24191603 | None:intergenic | 40.0% | |
GAACATGCTTTAACTGCTGT+TGG | - | chr2.2:24189707-24189726 | MS.gene039040:intron | 40.0% | |
GACCACAACTATATCAGGTA+TGG | - | chr2.2:24193714-24193733 | MS.gene039040:intron | 40.0% | |
GAGAGTTTGTAAACGAAAGG+AGG | + | chr2.2:24192024-24192043 | None:intergenic | 40.0% | |
GATGACAAGATACAAGATGG+AGG | + | chr2.2:24195351-24195370 | None:intergenic | 40.0% | |
GCATATAGCTAACAGAAACG+TGG | + | chr2.2:24190075-24190094 | None:intergenic | 40.0% | |
GCTGTGTGTGAGATTTGAAA+CGG | - | chr2.2:24189985-24190004 | MS.gene039040:intron | 40.0% | |
GGGAAGTTATCCATTTGCAT+TGG | + | chr2.2:24195541-24195560 | None:intergenic | 40.0% | |
GTACCGAGATAAAGTGAACT+CGG | + | chr2.2:24190745-24190764 | None:intergenic | 40.0% | |
GTGATCTTGGCATATACCAA+AGG | - | chr2.2:24194495-24194514 | MS.gene039040:intron | 40.0% | |
GTGTGCAGGATAAGTTATGT+TGG | - | chr2.2:24190933-24190952 | MS.gene039040:intron | 40.0% | |
GTTCATTGGGTCGTAAATGA+CGG | + | chr2.2:24190484-24190503 | None:intergenic | 40.0% | |
TAAACGGCACTATCCAGAAA+AGG | + | chr2.2:24192728-24192747 | None:intergenic | 40.0% | |
TAATAGAGACTGTCGAGCAA+CGG | + | chr2.2:24195213-24195232 | None:intergenic | 40.0% | |
TACCAAAAGCTCAACAGCAA+TGG | + | chr2.2:24192309-24192328 | None:intergenic | 40.0% | |
TAGTTTCCGCAAGTTGTTTG+TGG | - | chr2.2:24191575-24191594 | MS.gene039040:intron | 40.0% | |
TCATTTACGACCCAATGAAC+AGG | - | chr2.2:24190484-24190503 | MS.gene039040:intron | 40.0% | |
TCTCAAATACTAAGCCGAGA+AGG | + | chr2.2:24191462-24191481 | None:intergenic | 40.0% | |
TCTTGGAAAGCTTCTGCTAT+GGG | - | chr2.2:24193899-24193918 | MS.gene039040:intron | 40.0% | |
TGAACCAAGAAGCCAATCTT+AGG | + | chr2.2:24194421-24194440 | None:intergenic | 40.0% | |
TGACAAGATACAAGATGGAG+GGG | + | chr2.2:24195349-24195368 | None:intergenic | 40.0% | |
TGCAAGTTCAATCTACCACT+AGG | + | chr2.2:24190817-24190836 | None:intergenic | 40.0% | |
TGCAGGAATTTACTCAGTCT+GGG | - | chr2.2:24192961-24192980 | MS.gene039040:CDS | 40.0% | |
TGCCATACCTGATATAGTTG+TGG | + | chr2.2:24193719-24193738 | None:intergenic | 40.0% | |
TTCATTGGGTCGTAAATGAC+GGG | + | chr2.2:24190483-24190502 | None:intergenic | 40.0% | |
TTCTTGGAAAGCTTCTGCTA+TGG | - | chr2.2:24193898-24193917 | MS.gene039040:intron | 40.0% | |
TTGGAGCCTTGCTAACATAA+AGG | + | chr2.2:24194549-24194568 | None:intergenic | 40.0% | |
TTGGTGCAGACAAAAAGTTC+AGG | - | chr2.2:24194789-24194808 | MS.gene039040:intron | 40.0% | |
! | AAGGGTTTTCCCTTCACAAA+AGG | - | chr2.2:24191996-24192015 | MS.gene039040:intron | 40.0% |
! | ATGCCGACTGATACATTACT+AGG | - | chr2.2:24189899-24189918 | MS.gene039040:intron | 40.0% |
! | CAAATCGGTGGACTTGATTT+CGG | - | chr2.2:24190681-24190700 | MS.gene039040:intron | 40.0% |
! | CAACACCATGTCCAATTTTG+TGG | - | chr2.2:24195143-24195162 | MS.gene039040:intron | 40.0% |
! | CTGTGTGTGAGATTTGAAAC+GGG | - | chr2.2:24189986-24190005 | MS.gene039040:intron | 40.0% |
! | GAGCTTTTGGTATATGACAG+TGG | - | chr2.2:24192317-24192336 | MS.gene039040:intron | 40.0% |
! | GCAGCTCATGATGATTTTAC+AGG | + | chr2.2:24194527-24194546 | None:intergenic | 40.0% |
! | GCAGTATCACCGATTGTATA+AGG | - | chr2.2:24192457-24192476 | MS.gene039040:intron | 40.0% |
! | GTTGCTGGGTTTGATGATAA+TGG | - | chr2.2:24193692-24193711 | MS.gene039040:intron | 40.0% |
! | TGCCGACTGATACATTACTA+GGG | - | chr2.2:24189900-24189919 | MS.gene039040:intron | 40.0% |
! | TTAACTTTTGTCCCTCCTAG+TGG | - | chr2.2:24190799-24190818 | MS.gene039040:intron | 40.0% |
! | TTCCTTATTAGAAGCATGGG+CGG | - | chr2.2:24190772-24190791 | MS.gene039040:intron | 40.0% |
! | TTTTGTGAAGGGAAAACCCT+TGG | + | chr2.2:24191997-24192016 | None:intergenic | 40.0% |
!! | AAGTCCACCGATTTGATTTG+TGG | + | chr2.2:24190676-24190695 | None:intergenic | 40.0% |
!! | TTCCATTGCTGTTGAGCTTT+TGG | - | chr2.2:24192304-24192323 | MS.gene039040:intron | 40.0% |
!!! | AAGGTTGTTTTTGCTGTAGG+TGG | - | chr2.2:24193856-24193875 | MS.gene039040:intron | 40.0% |
!!! | GAGTTTTGGTTCGAAAAAGC+AGG | - | chr2.2:24192423-24192442 | MS.gene039040:CDS | 40.0% |
AATAGAGACTGTCGAGCAAC+GGG | + | chr2.2:24195212-24195231 | None:intergenic | 45.0% | |
AATGGCCTAACACCACTATC+AGG | + | chr2.2:24193656-24193675 | None:intergenic | 45.0% | |
ACCTGGGAAATGCCAACAAA+AGG | + | chr2.2:24194727-24194746 | None:intergenic | 45.0% | |
AGATGGCAGTTTCTTCTCTG+TGG | + | chr2.2:24191244-24191263 | None:intergenic | 45.0% | |
AGCTAACAGAAACGTGGCAT+CGG | + | chr2.2:24190069-24190088 | None:intergenic | 45.0% | |
ATCAAACCCAGCAACAAGCA+GGG | + | chr2.2:24193687-24193706 | None:intergenic | 45.0% | |
ATGGCCTAACACCACTATCA+GGG | + | chr2.2:24193655-24193674 | None:intergenic | 45.0% | |
ATTGACACTGAAGGAAGGGT+AGG | - | chr2.2:24194203-24194222 | MS.gene039040:intron | 45.0% | |
CACAGCCATATTGACACTGA+AGG | - | chr2.2:24194194-24194213 | MS.gene039040:intron | 45.0% | |
CCCTTCCTTCAGTGTCAATA+TGG | + | chr2.2:24194202-24194221 | None:intergenic | 45.0% | |
CCTGGGAAATGCCAACAAAA+GGG | + | chr2.2:24194726-24194745 | None:intergenic | 45.0% | |
CGAACCAAAACTCGGAAATC+AGG | + | chr2.2:24192416-24192435 | None:intergenic | 45.0% | |
CTTGGAAAGCTTCTGCTATG+GGG | - | chr2.2:24193900-24193919 | MS.gene039040:intron | 45.0% | |
GAGCTGCCTTTATGTTAGCA+AGG | - | chr2.2:24194540-24194559 | MS.gene039040:intron | 45.0% | |
GCAGGATAAGTTATGTTGGG+AGG | - | chr2.2:24190937-24190956 | MS.gene039040:intron | 45.0% | |
GCCATATTGACACTGAAGGA+AGG | - | chr2.2:24194198-24194217 | MS.gene039040:intron | 45.0% | |
GGAAGGGATTAGAAGGTGAT+GGG | + | chr2.2:24192094-24192113 | None:intergenic | 45.0% | |
GGTTCGAAAAAGCAGGAAAC+AGG | - | chr2.2:24192430-24192449 | MS.gene039040:CDS | 45.0% | |
TATTTGGGCATATGGTGTGC+AGG | - | chr2.2:24190919-24190938 | MS.gene039040:intron | 45.0% | |
TCAAGGAGTTACTCAGGGAT+AGG | + | chr2.2:24192122-24192141 | None:intergenic | 45.0% | |
TCAGTGTCAATATGGCTGTG+TGG | + | chr2.2:24194194-24194213 | None:intergenic | 45.0% | |
TGGAAGGGATTAGAAGGTGA+TGG | + | chr2.2:24192095-24192114 | None:intergenic | 45.0% | |
TTGGCATTTCCCAGGTTTGA+GGG | - | chr2.2:24194731-24194750 | MS.gene039040:intron | 45.0% | |
! | AAAGGAGGGACCTTTTGTGA+AGG | + | chr2.2:24192009-24192028 | None:intergenic | 45.0% |
! | AAGGAGGGACCTTTTGTGAA+GGG | + | chr2.2:24192008-24192027 | None:intergenic | 45.0% |
! | ACAAGTTGAGTGACAGGGAT+TGG | + | chr2.2:24192921-24192940 | None:intergenic | 45.0% |
! | ATTTTACAGGGATGGGCCTT+TGG | + | chr2.2:24194514-24194533 | None:intergenic | 45.0% |
! | GATAGTGGTGTTAGGCCATT+TGG | - | chr2.2:24193656-24193675 | MS.gene039040:CDS | 45.0% |
! | GATTTGAAACGGGTCTCTTG+AGG | - | chr2.2:24189996-24190015 | MS.gene039040:intron | 45.0% |
! | GGGGTATTTGACAACAATGG+AGG | + | chr2.2:24195330-24195349 | None:intergenic | 45.0% |
! | TCCTTATTAGAAGCATGGGC+GGG | - | chr2.2:24190773-24190792 | MS.gene039040:intron | 45.0% |
! | TTGGTTCTTGCAGCTGCAAA+TGG | - | chr2.2:24191207-24191226 | MS.gene039040:CDS | 45.0% |
!! | CAAGTCCTTTGGGTGTTGTT+TGG | - | chr2.2:24195084-24195103 | MS.gene039040:intron | 45.0% |
!! | GCTTTAACTGCTGTTGGTTC+TGG | - | chr2.2:24189713-24189732 | MS.gene039040:intron | 45.0% |
!! | GGAGGGGTATTTGACAACAA+TGG | + | chr2.2:24195333-24195352 | None:intergenic | 45.0% |
!! | GGTTCTGGACAAACTTCTCT+CGG | - | chr2.2:24189728-24189747 | MS.gene039040:intron | 45.0% |
!! | TATGGGTTAGGACTGCGAAA+TGG | - | chr2.2:24194991-24195010 | MS.gene039040:intron | 45.0% |
!! | TGCACCTAAGATTGGCTTCT+TGG | - | chr2.2:24194414-24194433 | MS.gene039040:intron | 45.0% |
!! | TTTGCCCTGATAGTGGTGTT+AGG | - | chr2.2:24193648-24193667 | MS.gene039040:CDS | 45.0% |
!!! | CTTATTTTTTGCTGGTGGGG+TGG | - | chr2.2:24195591-24195610 | MS.gene039040:intron | 45.0% |
ACAAGCAGGGACACTCCAAA+TGG | + | chr2.2:24193674-24193693 | None:intergenic | 50.0% | |
ATACCACACGTAGACGGGAA+TGG | + | chr2.2:24195307-24195326 | None:intergenic | 50.0% | |
ATAGAGACTGTCGAGCAACG+GGG | + | chr2.2:24195211-24195230 | None:intergenic | 50.0% | |
CATCAAACCCAGCAACAAGC+AGG | + | chr2.2:24193688-24193707 | None:intergenic | 50.0% | |
CCCTGTCACTCAACTTGTGA+GGG | - | chr2.2:24192923-24192942 | MS.gene039040:CDS | 50.0% | |
GACGGGTCGCAAATTTGAAC+AGG | + | chr2.2:24190466-24190485 | None:intergenic | 50.0% | |
GAGATCTGTCCCTCAAACCT+GGG | + | chr2.2:24194743-24194762 | None:intergenic | 50.0% | |
GGCAGTTGGAAGGGATTAGA+AGG | + | chr2.2:24192101-24192120 | None:intergenic | 50.0% | |
GTTACTCAGGGATAGGCAGT+TGG | + | chr2.2:24192115-24192134 | None:intergenic | 50.0% | |
GTTGGCATTTCCCAGGTTTG+AGG | - | chr2.2:24194730-24194749 | MS.gene039040:intron | 50.0% | |
TAGCAAGGCTCCAAGCTTGT+TGG | - | chr2.2:24194555-24194574 | MS.gene039040:intron | 50.0% | |
TCAGGGATAGGCAGTTGGAA+GGG | + | chr2.2:24192110-24192129 | None:intergenic | 50.0% | |
TCCCTGTCACTCAACTTGTG+AGG | - | chr2.2:24192922-24192941 | MS.gene039040:CDS | 50.0% | |
TGAGATCTGTCCCTCAAACC+TGG | + | chr2.2:24194744-24194763 | None:intergenic | 50.0% | |
TGGAGGATACCACACGTAGA+CGG | + | chr2.2:24195313-24195332 | None:intergenic | 50.0% | |
TTGCTGTAGGTGGATCCATC+AGG | - | chr2.2:24193866-24193885 | MS.gene039040:intron | 50.0% | |
! | CCCTCACAAGTTGAGTGACA+GGG | + | chr2.2:24192926-24192945 | None:intergenic | 50.0% |
! | CCCTTTTGTTGGCATTTCCC+AGG | - | chr2.2:24194723-24194742 | MS.gene039040:intron | 50.0% |
! | CCTTATTAGAAGCATGGGCG+GGG | - | chr2.2:24190774-24190793 | MS.gene039040:intron | 50.0% |
! | GGGTCCTGATTTCCGAGTTT+TGG | - | chr2.2:24192409-24192428 | MS.gene039040:CDS | 50.0% |
! | TCCCTCACAAGTTGAGTGAC+AGG | + | chr2.2:24192927-24192946 | None:intergenic | 50.0% |
!! | GGCTCCAAGCTTGTTGGATT+AGG | - | chr2.2:24194561-24194580 | MS.gene039040:intron | 50.0% |
CCCCGCCCATGCTTCTAATA+AGG | + | chr2.2:24190777-24190796 | None:intergenic | 55.0% | |
CGGGAATGGAGCATGCAACA+TGG | + | chr2.2:24195293-24195312 | None:intergenic | 55.0% | |
CTCAGGGATAGGCAGTTGGA+AGG | + | chr2.2:24192111-24192130 | None:intergenic | 55.0% | |
GGAAGTTGCTGCTGTCATGC+AGG | - | chr2.2:24192944-24192963 | MS.gene039040:CDS | 55.0% | |
GGAGGATACCACACGTAGAC+GGG | + | chr2.2:24195312-24195331 | None:intergenic | 55.0% | |
TTTGCTGGTGGGGTGGCATT+GGG | - | chr2.2:24195598-24195617 | MS.gene039040:intron | 55.0% | |
! | AGGGTGTTTAGTGCGAGTGG+AGG | + | chr2.2:24195253-24195272 | None:intergenic | 55.0% |
! | GAGTGTCCCTGCTTGTTGCT+GGG | - | chr2.2:24193678-24193697 | MS.gene039040:intron | 55.0% |
! | TTTTGCTGGTGGGGTGGCAT+TGG | - | chr2.2:24195597-24195616 | MS.gene039040:intron | 55.0% |
!! | TGGAGGGTGTTTAGTGCGAG+TGG | + | chr2.2:24195256-24195275 | None:intergenic | 55.0% |
GCTCCATTCCCGTCTACGTG+TGG | - | chr2.2:24195301-24195320 | MS.gene039040:intron | 60.0% | |
TTGCTGGTGGGGTGGCATTG+GGG | - | chr2.2:24195599-24195618 | MS.gene039040:intron | 60.0% | |
! | GGAGTGTCCCTGCTTGTTGC+TGG | - | chr2.2:24193677-24193696 | MS.gene039040:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 24189641 | 24195749 | 24189641 | ID=MS.gene039040 |
chr2.2 | mRNA | 24189641 | 24195749 | 24189641 | ID=MS.gene039040.t1;Parent=MS.gene039040 |
chr2.2 | exon | 24195632 | 24195749 | 24195632 | ID=MS.gene039040.t1.exon1;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24195632 | 24195749 | 24195632 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24194106 | 24194170 | 24194106 | ID=MS.gene039040.t1.exon2;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24194106 | 24194170 | 24194106 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24193647 | 24193693 | 24193647 | ID=MS.gene039040.t1.exon3;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24193647 | 24193693 | 24193647 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24192912 | 24192987 | 24192912 | ID=MS.gene039040.t1.exon4;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24192912 | 24192987 | 24192912 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24192408 | 24192475 | 24192408 | ID=MS.gene039040.t1.exon5;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24192408 | 24192475 | 24192408 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24191660 | 24191729 | 24191660 | ID=MS.gene039040.t1.exon6;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24191660 | 24191729 | 24191660 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24191430 | 24191515 | 24191430 | ID=MS.gene039040.t1.exon7;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24191430 | 24191515 | 24191430 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24191170 | 24191232 | 24191170 | ID=MS.gene039040.t1.exon8;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24191170 | 24191232 | 24191170 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24190580 | 24190645 | 24190580 | ID=MS.gene039040.t1.exon9;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24190580 | 24190645 | 24190580 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
chr2.2 | exon | 24189641 | 24189689 | 24189641 | ID=MS.gene039040.t1.exon10;Parent=MS.gene039040.t1 |
chr2.2 | CDS | 24189641 | 24189689 | 24189641 | ID=cds.MS.gene039040.t1;Parent=MS.gene039040.t1 |
Gene Sequence |
Protein sequence |