Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045566.t1 | XP_013442471.1 | 99.1 | 235 | 2 | 0 | 1 | 235 | 1 | 235 | 4.50E-125 | 457.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045566.t1 | O23708 | 93.6 | 235 | 15 | 0 | 1 | 235 | 1 | 235 | 3.8e-120 | 432.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045566.t1 | I3SFE3 | 99.1 | 235 | 2 | 0 | 1 | 235 | 1 | 235 | 3.3e-125 | 457.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045566.t1 | MTR_0167s0060 | 99.149 | 235 | 2 | 0 | 1 | 235 | 1 | 235 | 1.01e-173 | 477 |
| MS.gene045566.t1 | MTR_8g075320 | 38.767 | 227 | 134 | 3 | 4 | 228 | 2 | 225 | 1.45e-51 | 168 |
| MS.gene045566.t1 | MTR_2g060830 | 38.961 | 231 | 136 | 4 | 6 | 231 | 9 | 239 | 5.03e-51 | 166 |
| MS.gene045566.t1 | MTR_7g070070 | 36.752 | 234 | 141 | 4 | 5 | 231 | 4 | 237 | 2.08e-48 | 160 |
| MS.gene045566.t1 | MTR_8g464460 | 39.394 | 231 | 135 | 4 | 6 | 231 | 9 | 239 | 2.23e-48 | 159 |
| MS.gene045566.t1 | MTR_5g016590 | 36.325 | 234 | 142 | 4 | 5 | 231 | 4 | 237 | 1.40e-47 | 157 |
| MS.gene045566.t1 | MTR_1g112250 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 7.03e-47 | 155 |
| MS.gene045566.t1 | MTR_2g016050 | 37.445 | 227 | 137 | 3 | 4 | 228 | 2 | 225 | 4.64e-46 | 154 |
| MS.gene045566.t1 | MTR_1g022410 | 35.556 | 225 | 140 | 3 | 1 | 222 | 1 | 223 | 1.72e-41 | 143 |
| MS.gene045566.t1 | MTR_6g024135 | 37.158 | 183 | 115 | 0 | 6 | 188 | 8 | 190 | 9.36e-40 | 137 |
| MS.gene045566.t1 | MTR_4g012740 | 28.788 | 264 | 143 | 6 | 1 | 222 | 232 | 492 | 2.41e-26 | 106 |
| MS.gene045566.t1 | MTR_4g057090 | 29.954 | 217 | 140 | 7 | 9 | 218 | 91 | 302 | 9.40e-17 | 78.2 |
| MS.gene045566.t1 | MTR_6g013300 | 28.571 | 189 | 123 | 4 | 32 | 214 | 136 | 318 | 2.89e-13 | 68.6 |
| MS.gene045566.t1 | MTR_3g113730 | 33.654 | 104 | 66 | 2 | 122 | 222 | 6 | 109 | 4.32e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045566.t1 | AT1G16470 | 93.617 | 235 | 15 | 0 | 1 | 235 | 1 | 235 | 1.51e-163 | 451 |
| MS.gene045566.t1 | AT1G16470 | 93.617 | 235 | 15 | 0 | 1 | 235 | 1 | 235 | 1.51e-163 | 451 |
| MS.gene045566.t1 | AT1G79210 | 92.766 | 235 | 17 | 0 | 1 | 235 | 1 | 235 | 2.10e-162 | 448 |
| MS.gene045566.t1 | AT1G79210 | 92.766 | 235 | 17 | 0 | 1 | 235 | 1 | 235 | 2.10e-162 | 448 |
| MS.gene045566.t1 | AT1G79210 | 92.766 | 235 | 17 | 0 | 1 | 235 | 1 | 235 | 2.10e-162 | 448 |
| MS.gene045566.t1 | AT5G66140 | 39.035 | 228 | 133 | 4 | 4 | 228 | 2 | 226 | 8.34e-50 | 163 |
| MS.gene045566.t1 | AT3G51260 | 38.596 | 228 | 134 | 4 | 4 | 228 | 2 | 226 | 1.72e-48 | 160 |
| MS.gene045566.t1 | AT3G51260 | 39.623 | 212 | 123 | 3 | 4 | 213 | 2 | 210 | 3.10e-48 | 159 |
| MS.gene045566.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 5.27e-47 | 155 |
| MS.gene045566.t1 | AT1G53850 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 5.27e-47 | 155 |
| MS.gene045566.t1 | AT3G14290 | 35.526 | 228 | 142 | 2 | 4 | 228 | 6 | 231 | 1.02e-46 | 155 |
| MS.gene045566.t1 | AT5G35590 | 37.229 | 231 | 140 | 4 | 6 | 231 | 9 | 239 | 1.46e-46 | 155 |
| MS.gene045566.t1 | AT3G22110 | 36.681 | 229 | 135 | 4 | 5 | 230 | 4 | 225 | 3.25e-46 | 154 |
| MS.gene045566.t1 | AT2G05840 | 36.364 | 231 | 142 | 4 | 6 | 231 | 9 | 239 | 9.15e-45 | 150 |
| MS.gene045566.t1 | AT5G42790 | 36.444 | 225 | 138 | 3 | 1 | 222 | 1 | 223 | 7.49e-42 | 144 |
| MS.gene045566.t1 | AT1G47250 | 34.034 | 238 | 152 | 3 | 1 | 235 | 1 | 236 | 3.37e-40 | 139 |
| MS.gene045566.t1 | AT2G05840 | 34.928 | 209 | 132 | 3 | 6 | 210 | 9 | 217 | 1.35e-38 | 134 |
| MS.gene045566.t1 | AT2G27020 | 34.973 | 183 | 119 | 0 | 6 | 188 | 8 | 190 | 8.89e-37 | 130 |
| MS.gene045566.t1 | AT2G27020 | 34.973 | 183 | 119 | 0 | 6 | 188 | 110 | 292 | 2.08e-35 | 129 |
| MS.gene045566.t1 | AT2G05840 | 35.955 | 178 | 112 | 2 | 6 | 181 | 9 | 186 | 3.52e-35 | 124 |
| MS.gene045566.t1 | AT4G15165 | 26.754 | 228 | 117 | 4 | 5 | 230 | 4 | 183 | 1.03e-22 | 92.4 |
Find 50 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAAATTGATGATTATT+TGG | 0.158426 | 4.3:-30080677 | MS.gene045566:CDS |
| GGAGTGTCTCTGCTTGTTGC+TGG | 0.248519 | 4.3:-30083216 | MS.gene045566:CDS |
| GCTTTAACCGCTGTTGGTTC+TGG | 0.270331 | 4.3:-30085629 | MS.gene045566:CDS |
| ATGCAGGAATTTACTCAGTC+TGG | 0.330425 | 4.3:-30083985 | MS.gene045566:CDS |
| TTCTAGGTACACCGATGATA+TGG | 0.345310 | 4.3:-30082610 | MS.gene045566:intron |
| GCTTCATCAACCAATATAGA+TGG | 0.347807 | 4.3:+30085545 | None:intergenic |
| GTCTTTGTTGTTCAGTGGCA+TGG | 0.357696 | 4.3:-30084499 | MS.gene045566:intron |
| CGAACCAATACTCGGAAATC+AGG | 0.360536 | 4.3:+30084474 | None:intergenic |
| GAAGAAACTCCCATCTATAT+TGG | 0.368608 | 4.3:-30085555 | MS.gene045566:CDS |
| CAAACATAGGTGTTGTATAC+AGG | 0.379055 | 4.3:-30085398 | MS.gene045566:intron |
| GATAGTGGTGTCCGGCCATT+TGG | 0.384275 | 4.3:-30083237 | MS.gene045566:intron |
| GTTGCTGGGTTTGATGATGA+TGG | 0.391471 | 4.3:-30083201 | MS.gene045566:CDS |
| GCTGAAATTGATGATTATTT+GGG | 0.402207 | 4.3:-30080676 | MS.gene045566:CDS |
| TGATGGACCGCAATTATATC+AGG | 0.422365 | 4.3:-30083184 | MS.gene045566:intron |
| CTCGGTATCAAAGCTGCAAA+TGG | 0.434339 | 4.3:-30085596 | MS.gene045566:CDS |
| GAGTGTCTCTGCTTGTTGCT+GGG | 0.436297 | 4.3:-30083215 | MS.gene045566:CDS |
| TTGCTGTAGGTGGATCCATC+AGG | 0.438333 | 4.3:-30082915 | MS.gene045566:intron |
| TCCCTGTCACTCAACTTGTA+AGG | 0.441365 | 4.3:-30084023 | MS.gene045566:CDS |
| GGGTCCTGATTTCCGAGTAT+TGG | 0.446397 | 4.3:-30084478 | MS.gene045566:CDS |
| TCTTGGAAAGCTTCTGCTAT+GGG | 0.454997 | 4.3:-30082882 | MS.gene045566:CDS |
| ACAAGTTGAGTGACAGGGAT+TGG | 0.462122 | 4.3:+30084027 | None:intergenic |
| GGAAGTTGCTGCCGTTATGC+AGG | 0.465077 | 4.3:-30084001 | MS.gene045566:CDS |
| TCTTTGTTGTTCAGTGGCAT+GGG | 0.469804 | 4.3:-30084498 | MS.gene045566:intron |
| TTCTTGGAAAGCTTCTGCTA+TGG | 0.473689 | 4.3:-30082883 | MS.gene045566:CDS |
| AACATTGAAATCGGCATCGT+TGG | 0.478386 | 4.3:-30081977 | MS.gene045566:CDS |
| TCCCTTACAAGTTGAGTGAC+AGG | 0.479106 | 4.3:+30084021 | None:intergenic |
| CTGTATACAACACCTATGTT+TGG | 0.497013 | 4.3:+30085399 | None:intergenic |
| TTTGTCCTGATAGTGGTGTC+CGG | 0.504083 | 4.3:-30083245 | MS.gene045566:intron |
| GAGCATGCTTTAACCGCTGT+TGG | 0.504625 | 4.3:-30085635 | MS.gene045566:CDS |
| CTAAGACATTTCTTGAGAAG+AGG | 0.508140 | 4.3:-30082842 | MS.gene045566:intron |
| TGCAGGAATTTACTCAGTCT+GGG | 0.516768 | 4.3:-30083984 | MS.gene045566:intron |
| GGTTCTGGACAAACTTCTCT+CGG | 0.526164 | 4.3:-30085614 | MS.gene045566:CDS |
| AAATAATCATCAATTTCAGC+TGG | 0.537679 | 4.3:+30080679 | None:intergenic |
| CCCTGTCACTCAACTTGTAA+GGG | 0.541679 | 4.3:-30084022 | MS.gene045566:CDS |
| CTGAGTAAATTCCTGCATAA+CGG | 0.544918 | 4.3:+30083990 | None:intergenic |
| CCCTTACAAGTTGAGTGACA+GGG | 0.551681 | 4.3:+30084022 | None:intergenic |
| CTTCATCAACCAATATAGAT+GGG | 0.557361 | 4.3:+30085546 | None:intergenic |
| ACAAGCAGAGACACTCCAAA+TGG | 0.574302 | 4.3:+30083222 | None:intergenic |
| GGTAGTGTACTTTATATAGT+CGG | 0.574711 | 4.3:+30084421 | None:intergenic |
| GCAATATTGACACTCAAGGA+AGG | 0.576853 | 4.3:-30082564 | MS.gene045566:CDS |
| GCAGAGACACTCCAAATGGC+CGG | 0.585825 | 4.3:+30083226 | None:intergenic |
| ATCATCAAGCTCCATATCAT+CGG | 0.601420 | 4.3:+30082599 | None:intergenic |
| CAGTTATTAACACCAAACAT+AGG | 0.608948 | 4.3:-30085411 | MS.gene045566:CDS |
| CACAGCAATATTGACACTCA+AGG | 0.611442 | 4.3:-30082568 | MS.gene045566:CDS |
| TGCCATACCTGATATAATTG+CGG | 0.619400 | 4.3:+30083177 | None:intergenic |
| ATTTGAACAAGCTTACCAGA+AGG | 0.622818 | 4.3:+30085659 | None:intergenic |
| CAATATTGACACTCAAGGAA+GGG | 0.636489 | 4.3:-30082563 | MS.gene045566:intron |
| CTTGGAAAGCTTCTGCTATG+GGG | 0.641428 | 4.3:-30082881 | MS.gene045566:CDS |
| TGAGTGTCAATATTGCTGTG+TGG | 0.689041 | 4.3:+30082571 | None:intergenic |
| AGTTTGTCCAGAACCAACAG+CGG | 0.695714 | 4.3:+30085622 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGCAATATATATTTTTAA+TGG | - | chr4.3:30085387-30085406 | MS.gene045566:intron | 10.0% |
| !! | AAATAAATAAACACTGAAAA+GGG | + | chr4.3:30084490-30084509 | None:intergenic | 15.0% |
| !! | AAGTAATTTATAAATGTACT+AGG | - | chr4.3:30081525-30081544 | MS.gene045566:intron | 15.0% |
| !! | ACCGAAAAAATAAAATAAAA+GGG | + | chr4.3:30084333-30084352 | None:intergenic | 15.0% |
| !! | CTTATTAAAGAATTAATAGA+AGG | - | chr4.3:30081431-30081450 | MS.gene045566:intron | 15.0% |
| !! | GAAGACAAATTAAAAAAAAA+AGG | + | chr4.3:30082643-30082662 | None:intergenic | 15.0% |
| !! | TAAAATTGAAAAGTTAATGA+AGG | + | chr4.3:30083090-30083109 | None:intergenic | 15.0% |
| !! | TAAGTTAAAACATATTTGTA+TGG | - | chr4.3:30081013-30081032 | MS.gene045566:intron | 15.0% |
| !! | TATATTGTTTAAATGTTACT+TGG | - | chr4.3:30082026-30082045 | MS.gene045566:intron | 15.0% |
| !!! | AATTTGTTAATTATATTGCA+GGG | - | chr4.3:30085654-30085673 | MS.gene045566:CDS | 15.0% |
| !!! | GAAATATGATATTTTCATTA+AGG | + | chr4.3:30083863-30083882 | None:intergenic | 15.0% |
| !!! | TAATTTGTTAATTATATTGC+AGG | - | chr4.3:30085653-30085672 | MS.gene045566:CDS | 15.0% |
| !!! | TCCCTTTTATTTTATTTTTT+CGG | - | chr4.3:30084329-30084348 | MS.gene045566:intron | 15.0% |
| !! | AAAAGCTATAAATAAGTTTG+AGG | - | chr4.3:30084589-30084608 | MS.gene045566:intron | 20.0% |
| !! | AAGAATTTCGCAATATAAAA+TGG | + | chr4.3:30081967-30081986 | None:intergenic | 20.0% |
| !! | AATTAAAAAAAAAAGGACAC+AGG | + | chr4.3:30082636-30082655 | None:intergenic | 20.0% |
| !! | CAAATAAATAAACACTGAAA+AGG | + | chr4.3:30084491-30084510 | None:intergenic | 20.0% |
| !! | CACCGAAAAAATAAAATAAA+AGG | + | chr4.3:30084334-30084353 | None:intergenic | 20.0% |
| !! | TAGCTAAATTAAATGTTTAG+TGG | - | chr4.3:30082771-30082790 | MS.gene045566:intron | 20.0% |
| !! | TCAAAATATTCAGAAATTGA+TGG | + | chr4.3:30080871-30080890 | None:intergenic | 20.0% |
| !! | TGATACTTGAAAACAATTTA+AGG | + | chr4.3:30081824-30081843 | None:intergenic | 20.0% |
| !!! | ATGCATCTTTTGTTAAAAAT+AGG | - | chr4.3:30082277-30082296 | MS.gene045566:intron | 20.0% |
| !!! | ATGTTTTAACTTATTTGAAG+AGG | + | chr4.3:30081006-30081025 | None:intergenic | 20.0% |
| !!! | ATTAATGATGACAATGTTTT+AGG | - | chr4.3:30083556-30083575 | MS.gene045566:intron | 20.0% |
| !!! | CAAACTTATTTATAGCTTTT+AGG | + | chr4.3:30084589-30084608 | None:intergenic | 20.0% |
| !!! | CAATTTAAAACACTGAATTA+AGG | + | chr4.3:30083994-30084013 | None:intergenic | 20.0% |
| !!! | CTTAATTCAGTGTTTTAAAT+TGG | - | chr4.3:30083992-30084011 | MS.gene045566:CDS | 20.0% |
| !!! | GCAATATATATTTTTAATGG+AGG | - | chr4.3:30085390-30085409 | MS.gene045566:intron | 20.0% |
| !!! | TTGCACTTAGAATTTTTTAA+AGG | - | chr4.3:30083366-30083385 | MS.gene045566:intron | 20.0% |
| !!! | TTTCTTTTCTTAATTTTTGC+TGG | - | chr4.3:30085559-30085578 | MS.gene045566:CDS | 20.0% |
| ! | AAACAAAAAAAAATGCTCGA+AGG | + | chr4.3:30082209-30082228 | None:intergenic | 25.0% |
| ! | AAATAATCATCAATTTCAGC+TGG | + | chr4.3:30085688-30085707 | None:intergenic | 25.0% |
| ! | AACATAAAAACTGTCAATGA+AGG | + | chr4.3:30084238-30084257 | None:intergenic | 25.0% |
| ! | AATATTTGGTCAATATGACT+CGG | - | chr4.3:30082002-30082021 | MS.gene045566:CDS | 25.0% |
| ! | AATTGAAAAGTTAATGAAGG+AGG | + | chr4.3:30083087-30083106 | None:intergenic | 25.0% |
| ! | AATTGCTTAGATAAACATTG+TGG | - | chr4.3:30082952-30082971 | MS.gene045566:intron | 25.0% |
| ! | ACAATAAGATTCATGTTGAT+TGG | + | chr4.3:30082719-30082738 | None:intergenic | 25.0% |
| ! | ACATAAAAACTGTCAATGAA+GGG | + | chr4.3:30084237-30084256 | None:intergenic | 25.0% |
| ! | ACATATATGGTAAAGTTCAA+CGG | + | chr4.3:30082483-30082502 | None:intergenic | 25.0% |
| ! | AGTATAAAAAGAAAACAGAG+AGG | + | chr4.3:30081648-30081667 | None:intergenic | 25.0% |
| ! | ATAAGCTATGAGTACATATA+TGG | + | chr4.3:30082496-30082515 | None:intergenic | 25.0% |
| ! | ATACCAAATGATAACAGAAA+AGG | + | chr4.3:30082251-30082270 | None:intergenic | 25.0% |
| ! | ATGAATTGATAGAGATATTG+AGG | + | chr4.3:30083713-30083732 | None:intergenic | 25.0% |
| ! | ATTTACCAAAAACTCAAAGT+TGG | + | chr4.3:30082596-30082615 | None:intergenic | 25.0% |
| ! | GGTTCAAATGAAAAAAATAG+AGG | - | chr4.3:30084046-30084065 | MS.gene045566:intron | 25.0% |
| ! | GTATAAAAAGAAAACAGAGA+GGG | + | chr4.3:30081647-30081666 | None:intergenic | 25.0% |
| ! | GTCATATACTAAAAGTTCAA+CGG | + | chr4.3:30081788-30081807 | None:intergenic | 25.0% |
| ! | TAATTACTGTATGTATAGAG+TGG | - | chr4.3:30081385-30081404 | MS.gene045566:intron | 25.0% |
| ! | TATTGTAAGCAAAAAATTGC+AGG | - | chr4.3:30082312-30082331 | MS.gene045566:intron | 25.0% |
| ! | TCAGCAAAAAACATTGAAAT+CGG | - | chr4.3:30084378-30084397 | MS.gene045566:intron | 25.0% |
| ! | TCTAAACTATAAAACAAACC+AGG | + | chr4.3:30085273-30085292 | None:intergenic | 25.0% |
| ! | TGAGCTAAAAATTATGCTAT+CGG | - | chr4.3:30084547-30084566 | MS.gene045566:intron | 25.0% |
| ! | TGTGTGTAAAAATAAGTAAG+AGG | + | chr4.3:30083039-30083058 | None:intergenic | 25.0% |
| ! | TTGTTCCCTAAAATATACTT+TGG | - | chr4.3:30084438-30084457 | MS.gene045566:CDS | 25.0% |
| !! | AGCTGAAATTGATGATTATT+TGG | - | chr4.3:30085687-30085706 | MS.gene045566:CDS | 25.0% |
| !! | ATAAATAAGTTTGAGGCATT+CGG | - | chr4.3:30084596-30084615 | MS.gene045566:intron | 25.0% |
| !! | ATCTTTTGTTAAAAATAGGC+AGG | - | chr4.3:30082281-30082300 | MS.gene045566:intron | 25.0% |
| !! | CAGCTTATGATAATTTTAGA+GGG | + | chr4.3:30084138-30084157 | None:intergenic | 25.0% |
| !! | GCTGAAATTGATGATTATTT+GGG | - | chr4.3:30085688-30085707 | MS.gene045566:CDS | 25.0% |
| !! | GTGTTAATAACTGAATTTTC+TGG | + | chr4.3:30080946-30080965 | None:intergenic | 25.0% |
| !! | TCAGCTTATGATAATTTTAG+AGG | + | chr4.3:30084139-30084158 | None:intergenic | 25.0% |
| !! | TTATTTCTTTCTTTGTACAG+TGG | - | chr4.3:30081041-30081060 | MS.gene045566:intron | 25.0% |
| !! | TTTCATTCTTAGAGTTGATT+AGG | - | chr4.3:30083879-30083898 | MS.gene045566:intron | 25.0% |
| !! | TTTTCTTAATTTTTGCTGGT+GGG | - | chr4.3:30085563-30085582 | MS.gene045566:CDS | 25.0% |
| !!! | AGAAAATTGAAGGTTGTTTT+TGG | - | chr4.3:30083414-30083433 | MS.gene045566:intron | 25.0% |
| !!! | ATGTCATTGATTTCAAAACA+TGG | + | chr4.3:30085346-30085365 | None:intergenic | 25.0% |
| !!! | ATTTATTTTTGTCCTGATAG+TGG | - | chr4.3:30083112-30083131 | MS.gene045566:intron | 25.0% |
| !!! | TGTTGAATCTTTTTTAGTGA+GGG | + | chr4.3:30082675-30082694 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTACCAATGCAAA+TGG | - | chr4.3:30085504-30085523 | MS.gene045566:intron | 25.0% |
| AAATTAAGCAAGTGGGAATT+AGG | - | chr4.3:30085132-30085151 | MS.gene045566:intron | 30.0% | |
| AACGGTTATGATGTTATCAT+AGG | + | chr4.3:30081302-30081321 | None:intergenic | 30.0% | |
| AATAGAGGCTAATGTTATCT+AGG | - | chr4.3:30084061-30084080 | MS.gene045566:intron | 30.0% | |
| AATGGAGGCTAATTAAAATC+AGG | - | chr4.3:30085405-30085424 | MS.gene045566:CDS | 30.0% | |
| AATTAAGCAAGTGGGAATTA+GGG | - | chr4.3:30085133-30085152 | MS.gene045566:intron | 30.0% | |
| ACAAATTAAGTTACCGAATC+CGG | + | chr4.3:30085641-30085660 | None:intergenic | 30.0% | |
| ACATTGTAAACTGTTAGCAT+TGG | - | chr4.3:30081475-30081494 | MS.gene045566:intron | 30.0% | |
| ACGGTTATGATGTTATCATA+GGG | + | chr4.3:30081301-30081320 | None:intergenic | 30.0% | |
| AGGAGGAAAATAGAAGAAAA+AGG | + | chr4.3:30083070-30083089 | None:intergenic | 30.0% | |
| ATAAACATTGTGGTTCCTAT+TGG | - | chr4.3:30082962-30082981 | MS.gene045566:intron | 30.0% | |
| ATAGAGGCTAATGTTATCTA+GGG | - | chr4.3:30084062-30084081 | MS.gene045566:intron | 30.0% | |
| CAAGAAAAATATGAACCTGA+TGG | + | chr4.3:30083467-30083486 | None:intergenic | 30.0% | |
| CAGACAAGAAAAAAGAAAAG+AGG | + | chr4.3:30084269-30084288 | None:intergenic | 30.0% | |
| CAGTTATTAACACCAAACAT+AGG | - | chr4.3:30080953-30080972 | MS.gene045566:intron | 30.0% | |
| CCCTCAACATTAATGATAAT+CGG | + | chr4.3:30082815-30082834 | None:intergenic | 30.0% | |
| CCGATTATCATTAATGTTGA+GGG | - | chr4.3:30082812-30082831 | MS.gene045566:intron | 30.0% | |
| CCTCAACATTAATGATAATC+GGG | + | chr4.3:30082814-30082833 | None:intergenic | 30.0% | |
| CGATTAATGTCTATCAGATT+TGG | + | chr4.3:30082750-30082769 | None:intergenic | 30.0% | |
| CTCAACATTAATGATAATCG+GGG | + | chr4.3:30082813-30082832 | None:intergenic | 30.0% | |
| CTTCATCAACCAATATAGAT+GGG | + | chr4.3:30080821-30080840 | None:intergenic | 30.0% | |
| GAGTCATATTGACCAAATAT+TGG | + | chr4.3:30082003-30082022 | None:intergenic | 30.0% | |
| GGTAGTGTACTTTATATAGT+CGG | + | chr4.3:30081946-30081965 | None:intergenic | 30.0% | |
| GGTTCATTATGAATTCCAAT+AGG | + | chr4.3:30082980-30082999 | None:intergenic | 30.0% | |
| GTTTGTCAAACAATGAAATG+TGG | + | chr4.3:30085439-30085458 | None:intergenic | 30.0% | |
| TAAAAAAAAAAGGACACAGG+TGG | + | chr4.3:30082633-30082652 | None:intergenic | 30.0% | |
| TAAAGTTTCAACCCACATAA+TGG | + | chr4.3:30083628-30083647 | None:intergenic | 30.0% | |
| TAACAGAGAATTCTATCCAA+AGG | - | chr4.3:30081209-30081228 | MS.gene045566:intron | 30.0% | |
| TATTTGAACCTTGAATCATC+TGG | - | chr4.3:30084505-30084524 | MS.gene045566:intron | 30.0% | |
| TGATGAGAAACAAGAACATT+TGG | + | chr4.3:30085323-30085342 | None:intergenic | 30.0% | |
| ! | AATTCCCACTTGCTTAATTT+TGG | + | chr4.3:30085132-30085151 | None:intergenic | 30.0% |
| ! | AGCATTGGAATAGTGTAAAA+TGG | - | chr4.3:30081490-30081509 | MS.gene045566:intron | 30.0% |
| ! | AGTCTGCCAAAGTATATTTT+AGG | + | chr4.3:30084447-30084466 | None:intergenic | 30.0% |
| ! | CATCAGGTTCATATTTTTCT+TGG | - | chr4.3:30083465-30083484 | MS.gene045566:intron | 30.0% |
| ! | CTCTTTTGTCATATGATTTC+AGG | - | chr4.3:30080919-30080938 | MS.gene045566:intron | 30.0% |
| ! | CTTTTCTTAATTTTTGCTGG+TGG | - | chr4.3:30085562-30085581 | MS.gene045566:CDS | 30.0% |
| ! | GAACTTTTAGTATATGACAG+AGG | - | chr4.3:30081790-30081809 | MS.gene045566:intron | 30.0% |
| ! | GTCTGCCAAAGTATATTTTA+GGG | + | chr4.3:30084446-30084465 | None:intergenic | 30.0% |
| ! | TAAATAAGTTTGAGGCATTC+GGG | - | chr4.3:30084597-30084616 | MS.gene045566:intron | 30.0% |
| ! | TGCTACTTACAAAATGCATT+GGG | + | chr4.3:30085537-30085556 | None:intergenic | 30.0% |
| ! | TTGCCTTTTCTGTTATCATT+TGG | - | chr4.3:30082245-30082264 | MS.gene045566:intron | 30.0% |
| ! | TTGCTACTTACAAAATGCAT+TGG | + | chr4.3:30085538-30085557 | None:intergenic | 30.0% |
| ! | TTTCTTAATTTTTGCTGGTG+GGG | - | chr4.3:30085564-30085583 | MS.gene045566:CDS | 30.0% |
| !! | CAATGTTTTAGGCAAATATG+TGG | - | chr4.3:30083567-30083586 | MS.gene045566:intron | 30.0% |
| !! | TACTCTATTTTAGACAAACC+TGG | - | chr4.3:30085252-30085271 | MS.gene045566:intron | 30.0% |
| !! | TAGCTTTTAGGTATTCAGAT+TGG | + | chr4.3:30084577-30084596 | None:intergenic | 30.0% |
| !! | TCAGTGTTTTAAATTGGAGA+AGG | - | chr4.3:30083998-30084017 | MS.gene045566:CDS | 30.0% |
| !!! | AAGTTTTTTGTTTTGAACGC+CGG | - | chr4.3:30085619-30085638 | MS.gene045566:CDS | 30.0% |
| !!! | ATTTTGTCTTTGTTGTTCAG+TGG | - | chr4.3:30081860-30081879 | MS.gene045566:intron | 30.0% |
| !!! | CTCTCTATCTTTCCTTTTTT+TGG | + | chr4.3:30082541-30082560 | None:intergenic | 30.0% |
| !!! | CTGTTGAATCTTTTTTAGTG+AGG | + | chr4.3:30082676-30082695 | None:intergenic | 30.0% |
| !!! | CTTGTTTTACATTCGTATCA+TGG | - | chr4.3:30084675-30084694 | MS.gene045566:intron | 30.0% |
| !!! | GGAGCAACATTTTGATTAAA+CGG | + | chr4.3:30083947-30083966 | None:intergenic | 30.0% |
| !!! | GTTGAATCTTTTTTAGTGAG+GGG | + | chr4.3:30082674-30082693 | None:intergenic | 30.0% |
| !!! | TTATTTTTTCGGTGTTTTCC+AGG | - | chr4.3:30084340-30084359 | MS.gene045566:intron | 30.0% |
| !!! | TTGAATCTTTTTTAGTGAGG+GGG | + | chr4.3:30082673-30082692 | None:intergenic | 30.0% |
| ACCACCAAAATTAAGCAAGT+GGG | - | chr4.3:30085125-30085144 | MS.gene045566:intron | 35.0% | |
| ACGGTCAAAACATTTCTGAA+AGG | + | chr4.3:30082464-30082483 | None:intergenic | 35.0% | |
| ATCATCAAGCTCCATATCAT+CGG | + | chr4.3:30083768-30083787 | None:intergenic | 35.0% | |
| ATGATAACAGAAAAGGCAAC+AGG | + | chr4.3:30082244-30082263 | None:intergenic | 35.0% | |
| ATGCCATTGAAGTTTCTGTT+GGG | - | chr4.3:30081123-30081142 | MS.gene045566:intron | 35.0% | |
| ATTTGAACAAGCTTACCAGA+AGG | + | chr4.3:30080708-30080727 | None:intergenic | 35.0% | |
| CAATATTGACACTCAAGGAA+GGG | - | chr4.3:30083801-30083820 | MS.gene045566:intron | 35.0% | |
| CCCGATTATCATTAATGTTG+AGG | - | chr4.3:30082811-30082830 | MS.gene045566:intron | 35.0% | |
| CGGTTATGATGTTATCATAG+GGG | + | chr4.3:30081300-30081319 | None:intergenic | 35.0% | |
| CGTTCATCAAGTACTTATGA+TGG | + | chr4.3:30081257-30081276 | None:intergenic | 35.0% | |
| CTAAGACATTTCTTGAGAAG+AGG | - | chr4.3:30083522-30083541 | MS.gene045566:intron | 35.0% | |
| CTGAGTAAATTCCTGCATAA+CGG | + | chr4.3:30082377-30082396 | None:intergenic | 35.0% | |
| CTGATTGCTTGGAATGAATT+AGG | - | chr4.3:30082087-30082106 | MS.gene045566:intron | 35.0% | |
| CTGTATACAACACCTATGTT+TGG | + | chr4.3:30080968-30080987 | None:intergenic | 35.0% | |
| GAAAGAAACCAGATGATTCA+AGG | + | chr4.3:30084516-30084535 | None:intergenic | 35.0% | |
| GAAGAAACTCCCATCTATAT+TGG | - | chr4.3:30080809-30080828 | MS.gene045566:intron | 35.0% | |
| GAATAGGAAGAACTACATAC+AGG | + | chr4.3:30082059-30082078 | None:intergenic | 35.0% | |
| GAGAAAGAGGAGAAAATTGA+AGG | - | chr4.3:30083404-30083423 | MS.gene045566:intron | 35.0% | |
| GCAATCAGAAATGAAGGAAT+AGG | + | chr4.3:30082075-30082094 | None:intergenic | 35.0% | |
| GCTTCATCAACCAATATAGA+TGG | + | chr4.3:30080822-30080841 | None:intergenic | 35.0% | |
| GGTATTTAATGACTGTAGAG+AGG | + | chr4.3:30085018-30085037 | None:intergenic | 35.0% | |
| GTATAGAGTGGAAATAGATG+TGG | - | chr4.3:30081397-30081416 | MS.gene045566:intron | 35.0% | |
| GTGAAAACCACAACTGAATA+TGG | + | chr4.3:30084723-30084742 | None:intergenic | 35.0% | |
| GTGATCTTGACATTTACCAA+AGG | - | chr4.3:30084107-30084126 | MS.gene045566:intron | 35.0% | |
| TACCTAGAATTGGACAATCA+AGG | + | chr4.3:30083743-30083762 | None:intergenic | 35.0% | |
| TACTAAAAGTTCAACGGCAA+TGG | + | chr4.3:30081782-30081801 | None:intergenic | 35.0% | |
| TATGCCACTACTCCAAAAAA+AGG | - | chr4.3:30082526-30082545 | MS.gene045566:intron | 35.0% | |
| TCTAGACAGTATTCACTCAT+TGG | - | chr4.3:30083230-30083249 | MS.gene045566:CDS | 35.0% | |
| TGCATGCAGATTAGATTTAG+AGG | + | chr4.3:30083001-30083020 | None:intergenic | 35.0% | |
| TGCCATACCTGATATAATTG+CGG | + | chr4.3:30083190-30083209 | None:intergenic | 35.0% | |
| TGTGTTTGATGAGTTCATAC+TGG | - | chr4.3:30083331-30083350 | MS.gene045566:intron | 35.0% | |
| TTCCAAGCAATCAGAAATGA+AGG | + | chr4.3:30082081-30082100 | None:intergenic | 35.0% | |
| TTCCTTCATTTCTGATTGCT+TGG | - | chr4.3:30082076-30082095 | MS.gene045566:intron | 35.0% | |
| TTCCTTGATTGTCCAATTCT+AGG | - | chr4.3:30083738-30083757 | MS.gene045566:intron | 35.0% | |
| TTCGAAATGCCTCAAATTTC+AGG | + | chr4.3:30082866-30082885 | None:intergenic | 35.0% | |
| ! | AACAAAGTGCCTGAAATTTG+AGG | - | chr4.3:30082854-30082873 | MS.gene045566:CDS | 35.0% |
| ! | AAGCTGACTTTATGTTAGCA+GGG | - | chr4.3:30084152-30084171 | MS.gene045566:intron | 35.0% |
| ! | AAGGAAAGTTCGTCTAAGAT+TGG | - | chr4.3:30084017-30084036 | MS.gene045566:CDS | 35.0% |
| ! | ACACATTTCCTTTTCGAACA+TGG | - | chr4.3:30082110-30082129 | MS.gene045566:intron | 35.0% |
| ! | CAAACATAGGTGTTGTATAC+AGG | - | chr4.3:30080966-30080985 | MS.gene045566:intron | 35.0% |
| ! | CACATTTCCTTTTCGAACAT+GGG | - | chr4.3:30082111-30082130 | MS.gene045566:intron | 35.0% |
| ! | CATGAGTTAGTTTCATGCAA+CGG | - | chr4.3:30082918-30082937 | MS.gene045566:intron | 35.0% |
| ! | CATTCTTAGAGTTGATTAGG+AGG | - | chr4.3:30083882-30083901 | MS.gene045566:intron | 35.0% |
| ! | CTTACAACTTTTAGTCCTTC+TGG | - | chr4.3:30080690-30080709 | MS.gene045566:CDS | 35.0% |
| ! | TAAGCTGACTTTATGTTAGC+AGG | - | chr4.3:30084151-30084170 | MS.gene045566:intron | 35.0% |
| ! | TAATGATAATCGGGGTGTTA+TGG | + | chr4.3:30082805-30082824 | None:intergenic | 35.0% |
| ! | TATGATGGTTTGTAAACGCA+AGG | + | chr4.3:30081242-30081261 | None:intergenic | 35.0% |
| ! | TCAAGTCAAGGTATCTAGAA+GGG | + | chr4.3:30084967-30084986 | None:intergenic | 35.0% |
| !! | AAGGGATTAGTTTCAAAGAC+TGG | + | chr4.3:30084315-30084334 | None:intergenic | 35.0% |
| !! | ACTGCAGTTTTTAGAGAAAG+AGG | - | chr4.3:30083391-30083410 | MS.gene045566:intron | 35.0% |
| !! | CAATTTGTATTTGCTGTAGG+TGG | - | chr4.3:30083439-30083458 | MS.gene045566:intron | 35.0% |
| !! | GTGCAATTTGTATTTGCTGT+AGG | - | chr4.3:30083436-30083455 | MS.gene045566:intron | 35.0% |
| !!! | CTTTCCTTTTTTTGGAGTAG+TGG | + | chr4.3:30082533-30082552 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCGAACCAATACT+CGG | + | chr4.3:30081901-30081920 | None:intergenic | 35.0% |
| AACATTGAAATCGGCATCGT+TGG | - | chr4.3:30084387-30084406 | MS.gene045566:intron | 40.0% | |
| AGGTTGCTCTATCTAGGAAA+CGG | + | chr4.3:30081320-30081339 | None:intergenic | 40.0% | |
| AGTCAGACCATATTCAGTTG+TGG | - | chr4.3:30084713-30084732 | MS.gene045566:intron | 40.0% | |
| ATAGGGGAGAATCAGTTTAG+GGG | + | chr4.3:30081284-30081303 | None:intergenic | 40.0% | |
| ATCAAAATGTTGCTCCCTGT+CGG | - | chr4.3:30083951-30083970 | MS.gene045566:intron | 40.0% | |
| ATCATCGGTGTACCTAGAAT+TGG | + | chr4.3:30083753-30083772 | None:intergenic | 40.0% | |
| ATGCAGGAATTTACTCAGTC+TGG | - | chr4.3:30082379-30082398 | MS.gene045566:intron | 40.0% | |
| CAACAGTAGTAGTCAAGTCA+AGG | + | chr4.3:30084979-30084998 | None:intergenic | 40.0% | |
| CAACTGAATATGGTCTGACT+TGG | + | chr4.3:30084713-30084732 | None:intergenic | 40.0% | |
| CACAGCAATATTGACACTCA+AGG | - | chr4.3:30083796-30083815 | MS.gene045566:intron | 40.0% | |
| CACTCAGAATTCATCTCACA+AGG | + | chr4.3:30082159-30082178 | None:intergenic | 40.0% | |
| CATAGGGGAGAATCAGTTTA+GGG | + | chr4.3:30081285-30081304 | None:intergenic | 40.0% | |
| CATATATGCATGTGAGCATG+AGG | - | chr4.3:30081550-30081569 | MS.gene045566:intron | 40.0% | |
| CTAAGATCCCATGTTCGAAA+AGG | + | chr4.3:30082121-30082140 | None:intergenic | 40.0% | |
| CTATCATACACTATCCGACA+GGG | + | chr4.3:30083968-30083987 | None:intergenic | 40.0% | |
| CTTCCTGTTCTGCCAATATT+TGG | - | chr4.3:30081988-30082007 | MS.gene045566:CDS | 40.0% | |
| GACCACCAAAATTAAGCAAG+TGG | - | chr4.3:30085124-30085143 | MS.gene045566:intron | 40.0% | |
| GACCGCAATTATATCAGGTA+TGG | - | chr4.3:30083185-30083204 | MS.gene045566:CDS | 40.0% | |
| GATGCCATTGAAGTTTCTGT+TGG | - | chr4.3:30081122-30081141 | MS.gene045566:intron | 40.0% | |
| GCAAGTGGAGGAATATTATG+TGG | + | chr4.3:30084800-30084819 | None:intergenic | 40.0% | |
| GCAATATTGACACTCAAGGA+AGG | - | chr4.3:30083800-30083819 | MS.gene045566:intron | 40.0% | |
| GGAAGTGACTCAACTTAGTT+GGG | - | chr4.3:30081343-30081362 | MS.gene045566:intron | 40.0% | |
| GGGAAGTTATCCATTTGCAT+TGG | + | chr4.3:30085517-30085536 | None:intergenic | 40.0% | |
| GGTTCGAAAAAGCAGAAAAC+AGG | - | chr4.3:30081907-30081926 | MS.gene045566:intron | 40.0% | |
| GTGAGATGAATTCTGAGTGT+TGG | - | chr4.3:30082160-30082179 | MS.gene045566:intron | 40.0% | |
| GTGGTAGCTTCTTCATACTT+TGG | - | chr4.3:30081060-30081079 | MS.gene045566:intron | 40.0% | |
| GTTCCCAACAGAAACTTCAA+TGG | + | chr4.3:30081129-30081148 | None:intergenic | 40.0% | |
| TCAACGGCAATGGAAAAAGT+AGG | + | chr4.3:30081772-30081791 | None:intergenic | 40.0% | |
| TCATAGGGGAGAATCAGTTT+AGG | + | chr4.3:30081286-30081305 | None:intergenic | 40.0% | |
| TCTTGGAAAGCTTCTGCTAT+GGG | - | chr4.3:30083482-30083501 | MS.gene045566:intron | 40.0% | |
| TGAAGTTTCTGTTGGGAACT+TGG | - | chr4.3:30081130-30081149 | MS.gene045566:intron | 40.0% | |
| TGACCAAATATTGGCAGAAC+AGG | + | chr4.3:30081994-30082013 | None:intergenic | 40.0% | |
| TGAGTGTCAATATTGCTGTG+TGG | + | chr4.3:30083796-30083815 | None:intergenic | 40.0% | |
| TGCAGGAATTTACTCAGTCT+GGG | - | chr4.3:30082380-30082399 | MS.gene045566:intron | 40.0% | |
| TGGCAACAATAGTAGACTGT+CGG | + | chr4.3:30084780-30084799 | None:intergenic | 40.0% | |
| TTCTAGGTACACCGATGATA+TGG | - | chr4.3:30083754-30083773 | MS.gene045566:intron | 40.0% | |
| TTCTTGGAAAGCTTCTGCTA+TGG | - | chr4.3:30083481-30083500 | MS.gene045566:intron | 40.0% | |
| TTGGTGCAGACAAAAAGTTC+AGG | - | chr4.3:30084406-30084425 | MS.gene045566:intron | 40.0% | |
| ! | ATGGTTTGTAAACGCAAGGA+GGG | + | chr4.3:30081238-30081257 | None:intergenic | 40.0% |
| ! | GTCAAGTCAAGGTATCTAGA+AGG | + | chr4.3:30084968-30084987 | None:intergenic | 40.0% |
| ! | GTTAGTTTCATGCAACGGTT+CGG | - | chr4.3:30082923-30082942 | MS.gene045566:intron | 40.0% |
| ! | TCCCACTTGCTTAATTTTGG+TGG | + | chr4.3:30085129-30085148 | None:intergenic | 40.0% |
| ! | TGATGGACCGCAATTATATC+AGG | - | chr4.3:30083180-30083199 | MS.gene045566:intron | 40.0% |
| !! | AATGACTGTAGAGAGGTGTT+TGG | + | chr4.3:30085011-30085030 | None:intergenic | 40.0% |
| !! | ATTTTAGAGGGACATGCCTT+TGG | + | chr4.3:30084126-30084145 | None:intergenic | 40.0% |
| !! | CCAAAAACTCAAAGTTGGTG+AGG | + | chr4.3:30082591-30082610 | None:intergenic | 40.0% |
| !! | CCTCACCAACTTTGAGTTTT+TGG | - | chr4.3:30082588-30082607 | MS.gene045566:CDS | 40.0% |
| !! | TCTTTGTTGTTCAGTGGCAT+GGG | - | chr4.3:30081866-30081885 | MS.gene045566:intron | 40.0% |
| !! | TTCGTCTAAGATTGGCTTCT+TGG | - | chr4.3:30084025-30084044 | MS.gene045566:CDS | 40.0% |
| !! | TTTTTAGTGAGGGGGTGATA+AGG | + | chr4.3:30082665-30082684 | None:intergenic | 40.0% |
| !!! | TTTGTTTTGAACGCCGGATT+CGG | - | chr4.3:30085625-30085644 | MS.gene045566:CDS | 40.0% |
| ACAAGCAGAGACACTCCAAA+TGG | + | chr4.3:30083145-30083164 | None:intergenic | 45.0% | |
| AGTATGTCACATGGTGACAG+TGG | + | chr4.3:30084835-30084854 | None:intergenic | 45.0% | |
| AGTTTGTCCAGAACCAACAG+CGG | + | chr4.3:30080745-30080764 | None:intergenic | 45.0% | |
| ATATGCATGTGAGCATGAGG+TGG | - | chr4.3:30081553-30081572 | MS.gene045566:intron | 45.0% | |
| ATTGACACTCAAGGAAGGGT+AGG | - | chr4.3:30083805-30083824 | MS.gene045566:intron | 45.0% | |
| CCAAGACAGTATTCGCTCAT+TGG | - | chr4.3:30083284-30083303 | MS.gene045566:intron | 45.0% | |
| CCAATGAGCGAATACTGTCT+TGG | + | chr4.3:30083287-30083306 | None:intergenic | 45.0% | |
| CCCTGTCACTCAACTTGTAA+GGG | - | chr4.3:30082342-30082361 | MS.gene045566:intron | 45.0% | |
| CGAACCAATACTCGGAAATC+AGG | + | chr4.3:30081893-30081912 | None:intergenic | 45.0% | |
| CTCGGTATCAAAGCTGCAAA+TGG | - | chr4.3:30080768-30080787 | MS.gene045566:intron | 45.0% | |
| CTGCATGCAGTGAACTTAGT+TGG | - | chr4.3:30083012-30083031 | MS.gene045566:intron | 45.0% | |
| CTTGGAAAGCTTCTGCTATG+GGG | - | chr4.3:30083483-30083502 | MS.gene045566:intron | 45.0% | |
| GCTATCATACACTATCCGAC+AGG | + | chr4.3:30083969-30083988 | None:intergenic | 45.0% | |
| GGCAACAATAGTAGACTGTC+GGG | + | chr4.3:30084779-30084798 | None:intergenic | 45.0% | |
| GGGAAGTGACTCAACTTAGT+TGG | - | chr4.3:30081342-30081361 | MS.gene045566:intron | 45.0% | |
| TAAGCAAGTGGGAATTAGGG+TGG | - | chr4.3:30085136-30085155 | MS.gene045566:intron | 45.0% | |
| TCCCTGTCACTCAACTTGTA+AGG | - | chr4.3:30082341-30082360 | MS.gene045566:intron | 45.0% | |
| TCCTAGATAGAGCAACCTGA+GGG | - | chr4.3:30081322-30081341 | MS.gene045566:intron | 45.0% | |
| TTCCTAGATAGAGCAACCTG+AGG | - | chr4.3:30081321-30081340 | MS.gene045566:intron | 45.0% | |
| ! | AAGGTATCTAGAAGGGCAGT+CGG | + | chr4.3:30084960-30084979 | None:intergenic | 45.0% |
| ! | ACAAGTTGAGTGACAGGGAT+TGG | + | chr4.3:30082340-30082359 | None:intergenic | 45.0% |
| ! | CCCTTACAAGTTGAGTGACA+GGG | + | chr4.3:30082345-30082364 | None:intergenic | 45.0% |
| ! | CTTAATTTTTGCTGGTGGGG+TGG | - | chr4.3:30085567-30085586 | MS.gene045566:CDS | 45.0% |
| ! | GATGGTTTGTAAACGCAAGG+AGG | + | chr4.3:30081239-30081258 | None:intergenic | 45.0% |
| ! | TAAGTTGAGTCACTTCCCTC+AGG | + | chr4.3:30081340-30081359 | None:intergenic | 45.0% |
| ! | TCCCTTACAAGTTGAGTGAC+AGG | + | chr4.3:30082346-30082365 | None:intergenic | 45.0% |
| !! | AACCCACATAATGGACACAG+CGG | + | chr4.3:30083619-30083638 | None:intergenic | 45.0% |
| !! | AAGATGGAGGGGTGTTACAA+TGG | + | chr4.3:30084884-30084903 | None:intergenic | 45.0% |
| !! | AGATGGAGGGGTGTTACAAT+GGG | + | chr4.3:30084883-30084902 | None:intergenic | 45.0% |
| !! | GGGCTTCAAGCTTGTTAGAT+TGG | - | chr4.3:30084172-30084191 | MS.gene045566:intron | 45.0% |
| !! | GGTTCTGGACAAACTTCTCT+CGG | - | chr4.3:30080750-30080769 | MS.gene045566:intron | 45.0% |
| !! | GTCTTTGTTGTTCAGTGGCA+TGG | - | chr4.3:30081865-30081884 | MS.gene045566:intron | 45.0% |
| !! | GTTGCTGGGTTTGATGATGA+TGG | - | chr4.3:30083163-30083182 | MS.gene045566:intron | 45.0% |
| !! | TCGGTGTTTTCCAGGTTTGA+GGG | - | chr4.3:30084348-30084367 | MS.gene045566:intron | 45.0% |
| !! | TTTGTCCTGATAGTGGTGTC+CGG | - | chr4.3:30083119-30083138 | MS.gene045566:intron | 45.0% |
| !!! | TTCGGTGTTTTCCAGGTTTG+AGG | - | chr4.3:30084347-30084366 | MS.gene045566:intron | 45.0% |
| AACGCAAGGAGGGAAACCTT+TGG | + | chr4.3:30081228-30081247 | None:intergenic | 50.0% | |
| ATACCACACACTGACGACGA+TGG | + | chr4.3:30084858-30084877 | None:intergenic | 50.0% | |
| ATGTCACATGGTGACAGTGG+AGG | + | chr4.3:30084832-30084851 | None:intergenic | 50.0% | |
| CACGAGTGACGACAATGGAA+AGG | + | chr4.3:30085076-30085095 | None:intergenic | 50.0% | |
| CCAGCAGCAATGATTGTGGA+CGG | + | chr4.3:30085039-30085058 | None:intergenic | 50.0% | |
| CGACGATGGAGTATGTCACA+TGG | + | chr4.3:30084844-30084863 | None:intergenic | 50.0% | |
| GAGCATGCTTTAACCGCTGT+TGG | - | chr4.3:30080729-30080748 | MS.gene045566:intron | 50.0% | |
| GAGTGACGACAATGGAAAGG+TGG | + | chr4.3:30085073-30085092 | None:intergenic | 50.0% | |
| GGGTCCTGATTTCCGAGTAT+TGG | - | chr4.3:30081886-30081905 | MS.gene045566:intron | 50.0% | |
| GTACTTGACAGCAGAGAGAG+TGG | + | chr4.3:30084913-30084932 | None:intergenic | 50.0% | |
| GTCCGCTGTGTCCATTATGT+GGG | - | chr4.3:30083614-30083633 | MS.gene045566:intron | 50.0% | |
| GTGGGAATTAGGGTGGAAAG+AGG | - | chr4.3:30085143-30085162 | MS.gene045566:intron | 50.0% | |
| TGAGATCTGTCCCTCAAACC+TGG | + | chr4.3:30084361-30084380 | None:intergenic | 50.0% | |
| TGTCACATGGTGACAGTGGA+GGG | + | chr4.3:30084831-30084850 | None:intergenic | 50.0% | |
| TGTCCGCTGTGTCCATTATG+TGG | - | chr4.3:30083613-30083632 | MS.gene045566:intron | 50.0% | |
| TTGACAGCAGAGAGAGTGGT+GGG | + | chr4.3:30084909-30084928 | None:intergenic | 50.0% | |
| TTGCTGTAGGTGGATCCATC+AGG | - | chr4.3:30083449-30083468 | MS.gene045566:intron | 50.0% | |
| ! | AGGGTGTTTAGTGCAAGTGG+AGG | + | chr4.3:30084812-30084831 | None:intergenic | 50.0% |
| ! | AGTGTTGAGCAAGGATGGAG+AGG | + | chr4.3:30084935-30084954 | None:intergenic | 50.0% |
| ! | AGTTTGAGGCATTCGGGTAG+CGG | - | chr4.3:30084603-30084622 | MS.gene045566:intron | 50.0% |
| ! | GAGTGTCTCTGCTTGTTGCT+GGG | - | chr4.3:30083149-30083168 | MS.gene045566:intron | 50.0% |
| ! | TCCCTCAGGTTGCTCTATCT+AGG | + | chr4.3:30081326-30081345 | None:intergenic | 50.0% |
| !! | AGAGAGGTGTTTGGTGGTGA+TGG | + | chr4.3:30085002-30085021 | None:intergenic | 50.0% |
| !! | ATGGAGGGGTGTTACAATGG+GGG | + | chr4.3:30084881-30084900 | None:intergenic | 50.0% |
| !! | GACTGTAGAGAGGTGTTTGG+TGG | + | chr4.3:30085008-30085027 | None:intergenic | 50.0% |
| !! | GATGGAGGGGTGTTACAATG+GGG | + | chr4.3:30084882-30084901 | None:intergenic | 50.0% |
| !! | GCTTTAACCGCTGTTGGTTC+TGG | - | chr4.3:30080735-30080754 | MS.gene045566:intron | 50.0% |
| !! | TGGAGGGTGTTTAGTGCAAG+TGG | + | chr4.3:30084815-30084834 | None:intergenic | 50.0% |
| !! | TTTTGGTGGTCACAAGTGCC+TGG | + | chr4.3:30085115-30085134 | None:intergenic | 50.0% |
| AATGGCCGGACACCACTATC+AGG | + | chr4.3:30083127-30083146 | None:intergenic | 55.0% | |
| ACTCCATCGTCGTCAGTGTG+TGG | - | chr4.3:30084852-30084871 | MS.gene045566:intron | 55.0% | |
| AGGGTCACGAGTGACGACAA+TGG | + | chr4.3:30085081-30085100 | None:intergenic | 55.0% | |
| CCGTCCACAATCATTGCTGC+TGG | - | chr4.3:30085036-30085055 | MS.gene045566:intron | 55.0% | |
| CTTGACAGCAGAGAGAGTGG+TGG | + | chr4.3:30084910-30084929 | None:intergenic | 55.0% | |
| GCAGAGACACTCCAAATGGC+CGG | + | chr4.3:30083141-30083160 | None:intergenic | 55.0% | |
| GGAAGTTGCTGCCGTTATGC+AGG | - | chr4.3:30082363-30082382 | MS.gene045566:intron | 55.0% | |
| TCACAAGTGCCTGGTGGCAA+TGG | + | chr4.3:30085106-30085125 | None:intergenic | 55.0% | |
| TGCGCCAGCAGCAATGATTG+TGG | + | chr4.3:30085043-30085062 | None:intergenic | 55.0% | |
| TTTGCTGGTGGGGTGGCATT+GGG | - | chr4.3:30085574-30085593 | MS.gene045566:CDS | 55.0% | |
| ! | AGAGTGGTGGGAGAAGATGG+AGG | + | chr4.3:30084897-30084916 | None:intergenic | 55.0% |
| ! | AGTGGTGGGAGAAGATGGAG+GGG | + | chr4.3:30084895-30084914 | None:intergenic | 55.0% |
| ! | GAGAGAGTGGTGGGAGAAGA+TGG | + | chr4.3:30084900-30084919 | None:intergenic | 55.0% |
| ! | GAGTGGTGGGAGAAGATGGA+GGG | + | chr4.3:30084896-30084915 | None:intergenic | 55.0% |
| ! | GATAGTGGTGTCCGGCCATT+TGG | - | chr4.3:30083127-30083146 | MS.gene045566:intron | 55.0% |
| ! | GGAGTGTCTCTGCTTGTTGC+TGG | - | chr4.3:30083148-30083167 | MS.gene045566:intron | 55.0% |
| ! | GTTTGAGGCATTCGGGTAGC+GGG | - | chr4.3:30084604-30084623 | MS.gene045566:intron | 55.0% |
| ! | TTTTGCTGGTGGGGTGGCAT+TGG | - | chr4.3:30085573-30085592 | MS.gene045566:CDS | 55.0% |
| !! | CAGTCGGAGAGTGTTGAGCA+AGG | + | chr4.3:30084944-30084963 | None:intergenic | 55.0% |
| !! | CGGAGAGTGTTGAGCAAGGA+TGG | + | chr4.3:30084940-30084959 | None:intergenic | 55.0% |
| AGGGTGGAAAGAGGAGACGC+AGG | - | chr4.3:30085152-30085171 | MS.gene045566:intron | 60.0% | |
| AGTGCCTGGTGGCAATGGTG+AGG | + | chr4.3:30085101-30085120 | None:intergenic | 60.0% | |
| GTGCCTGGTGGCAATGGTGA+GGG | + | chr4.3:30085100-30085119 | None:intergenic | 60.0% | |
| TGACCCTCACCATTGCCACC+AGG | - | chr4.3:30085094-30085113 | MS.gene045566:intron | 60.0% | |
| TGGTGGTCACAAGTGCCTGG+TGG | + | chr4.3:30085112-30085131 | None:intergenic | 60.0% | |
| TTGCTGGTGGGGTGGCATTG+GGG | - | chr4.3:30085575-30085594 | MS.gene045566:CDS | 60.0% | |
| !! | AGGCATTCGGGTAGCGGGTT+GGG | - | chr4.3:30084609-30084628 | MS.gene045566:intron | 60.0% |
| !! | GAGGCATTCGGGTAGCGGGT+TGG | - | chr4.3:30084608-30084627 | MS.gene045566:intron | 65.0% |
| !! | TCGGGTAGCGGGTTGGGACT+AGG | - | chr4.3:30084615-30084634 | MS.gene045566:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 30080663 | 30085723 | 30080663 | ID=MS.gene045566 |
| chr4.3 | mRNA | 30080663 | 30085723 | 30080663 | ID=MS.gene045566.t1;Parent=MS.gene045566 |
| chr4.3 | exon | 30085541 | 30085723 | 30085541 | ID=MS.gene045566.t1.exon1;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30085541 | 30085723 | 30085541 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30085399 | 30085445 | 30085399 | ID=MS.gene045566.t1.exon2;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30085399 | 30085445 | 30085399 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30084431 | 30084506 | 30084431 | ID=MS.gene045566.t1.exon3;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30084431 | 30084506 | 30084431 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30083985 | 30084052 | 30083985 | ID=MS.gene045566.t1.exon4;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30083985 | 30084052 | 30083985 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30083185 | 30083254 | 30083185 | ID=MS.gene045566.t1.exon5;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30083185 | 30083254 | 30083185 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30082843 | 30082928 | 30082843 | ID=MS.gene045566.t1.exon6;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30082843 | 30082928 | 30082843 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30082564 | 30082626 | 30082564 | ID=MS.gene045566.t1.exon7;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30082564 | 30082626 | 30082564 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30081959 | 30082024 | 30081959 | ID=MS.gene045566.t1.exon8;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30081959 | 30082024 | 30081959 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| chr4.3 | exon | 30080663 | 30080711 | 30080663 | ID=MS.gene045566.t1.exon9;Parent=MS.gene045566.t1 |
| chr4.3 | CDS | 30080663 | 30080711 | 30080663 | ID=cds.MS.gene045566.t1;Parent=MS.gene045566.t1 |
| Gene Sequence |
| Protein sequence |
