Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41352.t1 | XP_003626551.2 | 81.4 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 3.60E-277 | 963.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41352.t1 | A0A1J6KGJ9 | 67.1 | 569 | 181 | 2 | 2 | 570 | 14 | 576 | 4.0e-232 | 805.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41352.t1 | G7L419 | 81.4 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 2.6e-277 | 963.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95748 | MS.gene41352 | PPI |
| MS.gene34650 | MS.gene41352 | PPI |
| MS.gene25516 | MS.gene41352 | PPI |
| MS.gene073214 | MS.gene41352 | PPI |
| MS.gene36841 | MS.gene41352 | PPI |
| MS.gene41352 | MS.gene99230 | PPI |
| MS.gene053964 | MS.gene41352 | PPI |
| MS.gene045936 | MS.gene41352 | PPI |
| MS.gene41352 | MS.gene046033 | PPI |
| MS.gene78774 | MS.gene41352 | PPI |
| MS.gene064168 | MS.gene41352 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41352.t1 | MTR_7g117110 | 81.436 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 0.0 | 974 |
| MS.gene41352.t1 | MTR_8g027920 | 70.403 | 571 | 164 | 2 | 1 | 571 | 10 | 575 | 0.0 | 855 |
| MS.gene41352.t1 | MTR_8g027965 | 69.527 | 571 | 169 | 2 | 1 | 571 | 10 | 575 | 0.0 | 844 |
| MS.gene41352.t1 | MTR_8g027955 | 68.651 | 571 | 174 | 2 | 1 | 571 | 17 | 582 | 0.0 | 835 |
| MS.gene41352.t1 | MTR_8g027970 | 66.200 | 571 | 188 | 2 | 1 | 571 | 10 | 575 | 0.0 | 816 |
| MS.gene41352.t1 | MTR_7g117110 | 77.919 | 394 | 86 | 1 | 1 | 394 | 10 | 402 | 0.0 | 648 |
| MS.gene41352.t1 | MTR_0102s0060 | 46.141 | 583 | 297 | 7 | 2 | 571 | 19 | 597 | 0.0 | 542 |
| MS.gene41352.t1 | MTR_8g037720 | 70.621 | 354 | 81 | 2 | 218 | 571 | 105 | 435 | 3.53e-179 | 513 |
| MS.gene41352.t1 | MTR_8g037720 | 81.600 | 125 | 23 | 0 | 1 | 125 | 1 | 125 | 1.43e-65 | 220 |
| MS.gene41352.t1 | MTR_1g047730 | 90.458 | 262 | 14 | 1 | 310 | 571 | 112 | 362 | 1.22e-168 | 483 |
| MS.gene41352.t1 | MTR_1g047730 | 64.557 | 158 | 12 | 2 | 1 | 158 | 1 | 114 | 2.98e-53 | 185 |
| MS.gene41352.t1 | MTR_5g016320 | 40.451 | 576 | 333 | 5 | 1 | 570 | 20 | 591 | 4.29e-150 | 444 |
| MS.gene41352.t1 | MTR_0035s0150 | 39.719 | 569 | 326 | 6 | 3 | 567 | 21 | 576 | 7.46e-144 | 428 |
| MS.gene41352.t1 | MTR_4g045903 | 37.979 | 574 | 341 | 6 | 3 | 568 | 31 | 597 | 1.53e-139 | 418 |
| MS.gene41352.t1 | MTR_8g467000 | 38.169 | 579 | 339 | 7 | 3 | 567 | 16 | 589 | 1.43e-138 | 415 |
| MS.gene41352.t1 | MTR_2g081860 | 37.694 | 581 | 342 | 7 | 3 | 567 | 15 | 591 | 7.46e-136 | 408 |
| MS.gene41352.t1 | MTR_1g088765 | 36.738 | 558 | 335 | 9 | 5 | 546 | 14 | 569 | 4.62e-121 | 370 |
| MS.gene41352.t1 | MTR_1g088765 | 38.407 | 427 | 245 | 9 | 134 | 546 | 3 | 425 | 9.90e-94 | 295 |
| MS.gene41352.t1 | MTR_7g094190 | 33.862 | 567 | 341 | 14 | 2 | 546 | 5 | 559 | 1.77e-91 | 293 |
| MS.gene41352.t1 | MTR_7g094190 | 32.692 | 468 | 288 | 11 | 96 | 546 | 2 | 459 | 1.25e-68 | 229 |
| MS.gene41352.t1 | MTR_7g094330 | 29.618 | 314 | 173 | 9 | 96 | 400 | 2 | 276 | 1.78e-34 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41352.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 21 | 586 | 0.0 | 747 |
| MS.gene41352.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 10 | 575 | 0.0 | 747 |
| MS.gene41352.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 10 | 575 | 0.0 | 747 |
| MS.gene41352.t1 | AT2G46370 | 61.753 | 502 | 186 | 2 | 69 | 570 | 1 | 496 | 0.0 | 676 |
| MS.gene41352.t1 | AT4G03400 | 48.299 | 588 | 281 | 7 | 2 | 571 | 9 | 591 | 0.0 | 568 |
| MS.gene41352.t1 | AT4G03400 | 48.299 | 588 | 281 | 7 | 2 | 571 | 9 | 591 | 0.0 | 568 |
| MS.gene41352.t1 | AT4G37390 | 39.168 | 577 | 335 | 8 | 3 | 570 | 25 | 594 | 2.42e-142 | 425 |
| MS.gene41352.t1 | AT2G23170 | 38.435 | 575 | 338 | 6 | 3 | 570 | 21 | 586 | 9.69e-142 | 423 |
| MS.gene41352.t1 | AT4G27260 | 38.783 | 575 | 337 | 5 | 5 | 567 | 25 | 596 | 3.08e-141 | 422 |
| MS.gene41352.t1 | AT2G14960 | 39.130 | 575 | 328 | 8 | 3 | 570 | 21 | 580 | 5.74e-141 | 421 |
| MS.gene41352.t1 | AT1G59500 | 39.236 | 576 | 330 | 9 | 3 | 570 | 25 | 588 | 1.37e-137 | 412 |
| MS.gene41352.t1 | AT1G23160 | 38.261 | 575 | 327 | 9 | 8 | 568 | 18 | 578 | 9.29e-135 | 404 |
| MS.gene41352.t1 | AT5G54510 | 37.456 | 574 | 340 | 7 | 8 | 567 | 28 | 596 | 7.47e-134 | 403 |
| MS.gene41352.t1 | AT5G13320 | 36.788 | 579 | 340 | 9 | 2 | 567 | 9 | 574 | 5.96e-131 | 395 |
| MS.gene41352.t1 | AT5G13320 | 36.788 | 579 | 340 | 9 | 2 | 567 | 9 | 574 | 5.96e-131 | 395 |
| MS.gene41352.t1 | AT5G13320 | 36.788 | 579 | 340 | 9 | 2 | 567 | 24 | 589 | 8.97e-131 | 395 |
| MS.gene41352.t1 | AT5G13370 | 37.018 | 570 | 343 | 9 | 8 | 567 | 17 | 580 | 5.12e-126 | 382 |
| MS.gene41352.t1 | AT1G48660 | 36.411 | 574 | 342 | 9 | 5 | 567 | 7 | 568 | 4.49e-124 | 377 |
| MS.gene41352.t1 | AT5G13360 | 36.252 | 571 | 345 | 9 | 8 | 567 | 17 | 579 | 5.53e-124 | 377 |
| MS.gene41352.t1 | AT5G13360 | 36.252 | 571 | 345 | 9 | 8 | 567 | 17 | 579 | 5.53e-124 | 377 |
| MS.gene41352.t1 | AT5G13360 | 36.851 | 578 | 332 | 12 | 8 | 567 | 95 | 657 | 5.22e-123 | 377 |
| MS.gene41352.t1 | AT1G48660 | 36.364 | 572 | 342 | 9 | 5 | 567 | 7 | 565 | 5.93e-123 | 374 |
| MS.gene41352.t1 | AT5G13350 | 35.777 | 573 | 346 | 10 | 8 | 567 | 17 | 580 | 1.05e-122 | 374 |
| MS.gene41352.t1 | AT5G13350 | 35.777 | 573 | 346 | 10 | 8 | 567 | 17 | 580 | 1.05e-122 | 374 |
| MS.gene41352.t1 | AT5G13380 | 36.380 | 569 | 347 | 8 | 8 | 567 | 47 | 609 | 2.81e-121 | 371 |
| MS.gene41352.t1 | AT2G47750 | 37.500 | 576 | 343 | 10 | 2 | 567 | 9 | 577 | 6.23e-121 | 369 |
| MS.gene41352.t1 | AT1G28130 | 35.556 | 585 | 347 | 10 | 8 | 567 | 17 | 596 | 1.59e-119 | 366 |
| MS.gene41352.t1 | AT5G51470 | 35.993 | 564 | 341 | 7 | 6 | 561 | 14 | 565 | 7.95e-119 | 363 |
| MS.gene41352.t1 | AT5G51470 | 35.759 | 481 | 290 | 6 | 89 | 561 | 6 | 475 | 5.00e-98 | 307 |
| MS.gene41352.t1 | AT1G48670 | 33.158 | 570 | 310 | 9 | 7 | 567 | 10 | 517 | 8.58e-98 | 307 |
| MS.gene41352.t1 | AT1G48670 | 37.811 | 402 | 232 | 5 | 174 | 567 | 15 | 406 | 1.69e-94 | 295 |
| MS.gene41352.t1 | AT1G28130 | 35.886 | 457 | 266 | 8 | 134 | 567 | 1 | 453 | 9.55e-92 | 290 |
| MS.gene41352.t1 | AT1G48690 | 32.979 | 188 | 122 | 2 | 5 | 192 | 7 | 190 | 1.65e-23 | 98.6 |
Find 119 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGAATATTTGCAAAATT+TGG | 0.027959 | 1.2:-30762918 | MS.gene41352:CDS |
| CTGTCACTGCTATGTCTTTA+AGG | 0.139591 | 1.2:-30762769 | MS.gene41352:intron |
| TCATTCCATGGTACATATTT+AGG | 0.159599 | 1.2:+30762445 | None:intergenic |
| TTGCAAAATTTGGGTCTTAA+TGG | 0.188482 | 1.2:-30762908 | MS.gene41352:CDS |
| TGGATTATGTTAGCTAATTC+TGG | 0.193129 | 1.2:+30761858 | None:intergenic |
| CATGATTCCGAAAATGTATT+TGG | 0.214843 | 1.2:+30761776 | None:intergenic |
| AGTAACACTGAAACGAATTT+TGG | 0.224757 | 1.2:-30762954 | MS.gene41352:CDS |
| TATGCTGTGTTTCCTCAAAA+TGG | 0.241224 | 1.2:-30761615 | MS.gene41352:CDS |
| CTTGATCATTACTTGGGATT+AGG | 0.268305 | 1.2:-30760806 | MS.gene41352:CDS |
| CAGGGCACTATGTAATATTC+TGG | 0.270183 | 1.2:-30760985 | MS.gene41352:CDS |
| AATTGAAAGCAGTACTAAAA+TGG | 0.271925 | 1.2:+30760693 | None:intergenic |
| CGGAATCATGAGTGGGTCTA+TGG | 0.284652 | 1.2:-30761763 | MS.gene41352:CDS |
| TCAATAATTCTGTTGATATA+AGG | 0.285153 | 1.2:+30762824 | None:intergenic |
| TTTCAGGTTTATACCGATAT+AGG | 0.295301 | 1.2:-30761216 | MS.gene41352:intron |
| CTACGAATGAACTTGAGTTT+TGG | 0.296630 | 1.2:+30761151 | None:intergenic |
| ATGTTAGCTAATTCTGGATT+TGG | 0.302150 | 1.2:+30761864 | None:intergenic |
| CCTAACAACTCGGAGTTCTA+AGG | 0.307012 | 1.2:+30760850 | None:intergenic |
| GACATAGCCATTCGAATAGA+TGG | 0.313509 | 1.2:+30761900 | None:intergenic |
| ACTTGTTACACACAAAGATT+TGG | 0.315068 | 1.2:-30762849 | MS.gene41352:CDS |
| GCAGAATATTTGCAAAATTT+GGG | 0.329600 | 1.2:-30762917 | MS.gene41352:CDS |
| ATTATTAGCAGAAGAGAAAC+TGG | 0.346697 | 1.2:-30761050 | MS.gene41352:CDS |
| AAGGCTTTACACTTTATATA+TGG | 0.348340 | 1.2:-30762242 | MS.gene41352:CDS |
| CTAGTACTTACCTGCTGAAT+TGG | 0.348980 | 1.2:+30761473 | None:intergenic |
| CCTTAGAACTCCGAGTTGTT+AGG | 0.350159 | 1.2:-30760850 | MS.gene41352:CDS |
| CCGAAAATGTATTTGGCGTT+AGG | 0.350472 | 1.2:+30761783 | None:intergenic |
| ACAGCATAAGTTGCCAAATC+AGG | 0.369408 | 1.2:+30761630 | None:intergenic |
| TAATATTCTGGGAAATCAAT+GGG | 0.390279 | 1.2:-30760973 | MS.gene41352:CDS |
| GGCTAATTGTAAATCTTTCT+CGG | 0.395078 | 1.2:+30761090 | None:intergenic |
| CTCGTAGCTACGACTATTAC+AGG | 0.396155 | 1.2:-30762191 | MS.gene41352:CDS |
| GGTTCTTACTAGCAGAATTA+CGG | 0.402845 | 1.2:-30761925 | MS.gene41352:CDS |
| TTATATTGTCATCTATTAAG+TGG | 0.410782 | 1.2:-30762065 | MS.gene41352:CDS |
| TATATCAACAGAATTATTGA+TGG | 0.412423 | 1.2:-30762821 | MS.gene41352:CDS |
| CTCGTAAATTCAACACTATC+GGG | 0.413035 | 1.2:-30760874 | MS.gene41352:CDS |
| TGCGCTGATCCTCGGCCAGT+GGG | 0.421011 | 1.2:-30761540 | MS.gene41352:CDS |
| CCACGTCCCCTAGCCTATAT+CGG | 0.428183 | 1.2:+30761203 | None:intergenic |
| AATGTATAGGGATGAACAAC+TGG | 0.430483 | 1.2:-30761830 | MS.gene41352:CDS |
| GATTGAATGTTGCAACTGTT+TGG | 0.433144 | 1.2:-30760930 | MS.gene41352:CDS |
| AAAGATTCTTGATCATTACT+TGG | 0.435190 | 1.2:-30760813 | MS.gene41352:CDS |
| GGGGACGTGGTAAAAGTTAT+GGG | 0.445224 | 1.2:-30761190 | MS.gene41352:CDS |
| GGACAAAATACCACTTCATC+TGG | 0.446840 | 1.2:+30762104 | None:intergenic |
| AATTGAGAACCTGCTCATAT+AGG | 0.447744 | 1.2:+30762378 | None:intergenic |
| TGCAGTTCTGGCACTACTCA+AGG | 0.448035 | 1.2:-30762472 | MS.gene41352:intron |
| GATAAGTCTTTCATCGATGC+AGG | 0.448638 | 1.2:-30760908 | MS.gene41352:CDS |
| GTTCAAAGGTTCTGAAAGCT+TGG | 0.451624 | 1.2:+30761985 | None:intergenic |
| AGGGGACGTGGTAAAAGTTA+TGG | 0.452477 | 1.2:-30761191 | MS.gene41352:CDS |
| GGGTCTATGGAGCCATATAT+AGG | 0.456213 | 1.2:-30761750 | MS.gene41352:CDS |
| GTAATATTCTGGGAAATCAA+TGG | 0.457211 | 1.2:-30760974 | MS.gene41352:CDS |
| CTCTTCCCACACTTGTTCAA+AGG | 0.458475 | 1.2:+30761971 | None:intergenic |
| TTCACCTCAGTGAGCCCCAC+TGG | 0.462755 | 1.2:+30761525 | None:intergenic |
| ACAGGCTTTGTAGTGAGAAT+AGG | 0.464344 | 1.2:+30762788 | None:intergenic |
| GTCGATTTATCTAAAGAGCC+AGG | 0.473431 | 1.2:-30761004 | MS.gene41352:CDS |
| CCGATATAGGCTAGGGGACG+TGG | 0.478475 | 1.2:-30761203 | MS.gene41352:CDS |
| CCTGCTCATATAGGCAAAAG+AGG | 0.486162 | 1.2:+30762387 | None:intergenic |
| TAATTTAGATGATGCTTCCA+TGG | 0.491932 | 1.2:+30761069 | None:intergenic |
| AGTGGGGCTCACTGAGGTGA+AGG | 0.492164 | 1.2:-30761523 | MS.gene41352:CDS |
| TGGACTATGTTATGAGCAAA+TGG | 0.495394 | 1.2:+30762005 | None:intergenic |
| TCTCGTAAATTCAACACTAT+CGG | 0.495584 | 1.2:-30760875 | MS.gene41352:CDS |
| AGCAAACAGTTCAAAACAAG+AGG | 0.496078 | 1.2:-30762218 | MS.gene41352:CDS |
| CAAGTTTATAGAAGAATTTG+AGG | 0.497165 | 1.2:-30763008 | MS.gene41352:CDS |
| ACACATGACTTGAAACTCTC+AGG | 0.499043 | 1.2:+30762875 | None:intergenic |
| AAGATTCTTGATCATTACTT+GGG | 0.502906 | 1.2:-30760812 | MS.gene41352:CDS |
| TCAGTGAGCCCCACTGGCCG+AGG | 0.503729 | 1.2:+30761531 | None:intergenic |
| CAGCATAAGTTGCCAAATCA+GGG | 0.513636 | 1.2:+30761631 | None:intergenic |
| ATTTCCTTTGCGCTGATCCT+CGG | 0.515673 | 1.2:-30761548 | MS.gene41352:CDS |
| TTGCGCTGATCCTCGGCCAG+TGG | 0.516907 | 1.2:-30761541 | MS.gene41352:CDS |
| CTCACACAGCTTAGCAATGA+GGG | 0.517284 | 1.2:-30761573 | MS.gene41352:CDS |
| TCTATCTACGGAGCTTCTGA+AGG | 0.519022 | 1.2:-30761687 | MS.gene41352:CDS |
| GGTTTATACCGATATAGGCT+AGG | 0.519182 | 1.2:-30761211 | MS.gene41352:CDS |
| AGGGCACTATGTAATATTCT+GGG | 0.521159 | 1.2:-30760984 | MS.gene41352:CDS |
| TCAAACAATTCATCATTCCA+TGG | 0.521283 | 1.2:+30762433 | None:intergenic |
| AAATCTTTGTGTGTAACAAG+TGG | 0.522472 | 1.2:+30762851 | None:intergenic |
| CAGAACCTTTGAACAAGTGT+GGG | 0.527080 | 1.2:-30761976 | MS.gene41352:CDS |
| GGAAAATTGAGGCATTATGC+AGG | 0.532140 | 1.2:-30761729 | MS.gene41352:CDS |
| TACGGTTCCATCTATTCGAA+TGG | 0.537195 | 1.2:-30761907 | MS.gene41352:CDS |
| GTTTATACCGATATAGGCTA+GGG | 0.538715 | 1.2:-30761210 | MS.gene41352:CDS |
| GAACTCCGAGTTGTTAGGAA+AGG | 0.539267 | 1.2:-30760845 | MS.gene41352:CDS |
| GAAAGATTTACAATTAGCCA+TGG | 0.540891 | 1.2:-30761086 | MS.gene41352:CDS |
| TCAGAACCTTTGAACAAGTG+TGG | 0.541122 | 1.2:-30761977 | MS.gene41352:CDS |
| ATTGTTGTGACCAATTCAGC+AGG | 0.541922 | 1.2:-30761483 | MS.gene41352:intron |
| TTCACTGCATGCGTATAACA+TGG | 0.543670 | 1.2:+30762152 | None:intergenic |
| ATGTTATACGCATGCAGTGA+AGG | 0.545900 | 1.2:-30762150 | MS.gene41352:CDS |
| CAGAATATTACATAGTGCCC+TGG | 0.563126 | 1.2:+30760986 | None:intergenic |
| CTTAAAGACATAGCAGTGAC+AGG | 0.563677 | 1.2:+30762770 | None:intergenic |
| TGTGCAAAACCTACACATCT+TGG | 0.565552 | 1.2:+30760758 | None:intergenic |
| AACTGAGTGCAGATGCAGCA+AGG | 0.575201 | 1.2:-30762985 | MS.gene41352:CDS |
| CTTTGTGGCGATATAAGAGA+AGG | 0.580598 | 1.2:-30761948 | MS.gene41352:CDS |
| GGGCTCACTGAGGTGAAGGT+TGG | 0.580822 | 1.2:-30761519 | MS.gene41352:CDS |
| ATATTGCAGTCCAGATGAAG+TGG | 0.582078 | 1.2:-30762114 | MS.gene41352:CDS |
| ACTGAGTGCAGATGCAGCAA+GGG | 0.592800 | 1.2:-30762984 | MS.gene41352:CDS |
| ATAGGGATGAACAACTGGTA+TGG | 0.597791 | 1.2:-30761825 | MS.gene41352:CDS |
| CCTCTAGTGACTTCTATCTA+CGG | 0.602111 | 1.2:-30761699 | MS.gene41352:CDS |
| GCGCTGATCCTCGGCCAGTG+GGG | 0.602151 | 1.2:-30761539 | MS.gene41352:CDS |
| CTATCTACGGAGCTTCTGAA+GGG | 0.605624 | 1.2:-30761686 | MS.gene41352:CDS |
| GCAAACAGTTCAAAACAAGA+GGG | 0.609169 | 1.2:-30762217 | MS.gene41352:CDS |
| CAAAACTCAAGTTCATTCGT+AGG | 0.609589 | 1.2:-30761150 | MS.gene41352:CDS |
| GCAGTTCTGGCACTACTCAA+GGG | 0.610736 | 1.2:-30762471 | MS.gene41352:intron |
| TTTGTGGCGATATAAGAGAA+GGG | 0.610870 | 1.2:-30761947 | MS.gene41352:CDS |
| TATAAGACACCAAGATGTGT+AGG | 0.611240 | 1.2:-30760767 | MS.gene41352:CDS |
| CTGGCCGAGGATCAGCGCAA+AGG | 0.620440 | 1.2:+30761544 | None:intergenic |
| AGCATAAGTTGCCAAATCAG+GGG | 0.621676 | 1.2:+30761632 | None:intergenic |
| TCTCACACAGCTTAGCAATG+AGG | 0.621741 | 1.2:-30761574 | MS.gene41352:CDS |
| GGAAGCCTAAATATGTACCA+TGG | 0.623088 | 1.2:-30762450 | MS.gene41352:CDS |
| TTGTGGCGATATAAGAGAAG+GGG | 0.625311 | 1.2:-30761946 | MS.gene41352:CDS |
| AGCCATATATAGGAAAATTG+AGG | 0.628804 | 1.2:-30761740 | MS.gene41352:CDS |
| TTGGCGTTAGGAAACAACTC+TGG | 0.629080 | 1.2:+30761795 | None:intergenic |
| TCGGCCAGTGGGGCTCACTG+AGG | 0.631494 | 1.2:-30761529 | MS.gene41352:CDS |
| ATGTTCCTTTCCTAACAACT+CGG | 0.632446 | 1.2:+30760840 | None:intergenic |
| TCATTGCTAAGCTGTGTGAG+AGG | 0.638842 | 1.2:+30761576 | None:intergenic |
| TCGATTTATCTAAAGAGCCA+GGG | 0.641491 | 1.2:-30761003 | MS.gene41352:CDS |
| AAACAGTTCAAAACAAGAGG+GGG | 0.650220 | 1.2:-30762215 | MS.gene41352:CDS |
| GCATAAGTTGCCAAATCAGG+GGG | 0.662211 | 1.2:+30761633 | None:intergenic |
| CCGTAGATAGAAGTCACTAG+AGG | 0.665991 | 1.2:+30761699 | None:intergenic |
| TCGTAAATTCAACACTATCG+GGG | 0.674742 | 1.2:-30760873 | MS.gene41352:CDS |
| AAGTGGACTGATTTACTGCG+AGG | 0.679750 | 1.2:-30762048 | MS.gene41352:CDS |
| CAAACAGTTCAAAACAAGAG+GGG | 0.691597 | 1.2:-30762216 | MS.gene41352:CDS |
| CAAGTGTGGGAAGAGCTTTG+TGG | 0.700373 | 1.2:-30761963 | MS.gene41352:CDS |
| AATATTCTGGGAAATCAATG+GGG | 0.705325 | 1.2:-30760972 | MS.gene41352:CDS |
| GCTCTTTAGATAAATCGACA+TGG | 0.722631 | 1.2:+30761008 | None:intergenic |
| TTTATACCGATATAGGCTAG+GGG | 0.725642 | 1.2:-30761209 | MS.gene41352:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGATATCTATATTTAA+TGG | + | chr1.2:30762358-30762377 | None:intergenic | 10.0% |
| !! | ATATAATGACTGAAAAAAAT+CGG | + | chr1.2:30761625-30761644 | None:intergenic | 15.0% |
| !!! | AACGTTCTATATTTTTTTAT+CGG | + | chr1.2:30761063-30761082 | None:intergenic | 15.0% |
| !! | AAGAAAAATAAACAAACAAG+GGG | + | chr1.2:30760973-30760992 | None:intergenic | 20.0% |
| !! | ATAATCCACAAAAAATGTAT+AGG | - | chr1.2:30761861-30761880 | MS.gene41352:CDS | 20.0% |
| !! | GAAGAAAAATAAACAAACAA+GGG | + | chr1.2:30760974-30760993 | None:intergenic | 20.0% |
| !! | TAATCCACAAAAAATGTATA+GGG | - | chr1.2:30761862-30761881 | MS.gene41352:CDS | 20.0% |
| !! | TATAATGACTGAAAAAAATC+GGG | + | chr1.2:30761624-30761643 | None:intergenic | 20.0% |
| !! | TATATCAACAGAATTATTGA+TGG | - | chr1.2:30760883-30760902 | MS.gene41352:CDS | 20.0% |
| !! | TCAATAATTCTGTTGATATA+AGG | + | chr1.2:30760883-30760902 | None:intergenic | 20.0% |
| !! | TCTGACATATATAATTCAAA+TGG | - | chr1.2:30761409-30761428 | MS.gene41352:intron | 20.0% |
| !! | TCTTATTATGTGAAAATCAT+TGG | - | chr1.2:30761120-30761139 | MS.gene41352:CDS | 20.0% |
| !! | TGAAGAAAAATAAACAAACA+AGG | + | chr1.2:30760975-30760994 | None:intergenic | 20.0% |
| !! | TGTTTGAAAGTAAAACTAAT+AGG | - | chr1.2:30762384-30762403 | MS.gene41352:intron | 20.0% |
| !! | TTATATTGTCATCTATTAAG+TGG | - | chr1.2:30761639-30761658 | MS.gene41352:CDS | 20.0% |
| !!! | AAGCATATATTTTTATTGAG+AGG | - | chr1.2:30761088-30761107 | MS.gene41352:CDS | 20.0% |
| ! | AAAGATTCTTGATCATTACT+TGG | - | chr1.2:30762891-30762910 | MS.gene41352:CDS | 25.0% |
| ! | AAGATTCTTGATCATTACTT+GGG | - | chr1.2:30762892-30762911 | MS.gene41352:CDS | 25.0% |
| ! | AAGGCTTTACACTTTATATA+TGG | - | chr1.2:30761462-30761481 | MS.gene41352:intron | 25.0% |
| ! | AATCATTGGATCAAATCAAA+TGG | - | chr1.2:30761134-30761153 | MS.gene41352:CDS | 25.0% |
| ! | AATTATATAGCCATGTTAGT+TGG | + | chr1.2:30762470-30762489 | None:intergenic | 25.0% |
| ! | AATTGAAAGCAGTACTAAAA+TGG | + | chr1.2:30763014-30763033 | None:intergenic | 25.0% |
| ! | AGCAGAATATTTGCAAAATT+TGG | - | chr1.2:30760786-30760805 | MS.gene41352:CDS | 25.0% |
| ! | AGTTTCCTTTGATGAAAAAT+GGG | - | chr1.2:30761439-30761458 | MS.gene41352:intron | 25.0% |
| ! | CAAGTTTATAGAAGAATTTG+AGG | - | chr1.2:30760696-30760715 | MS.gene41352:CDS | 25.0% |
| ! | GCAGAATATTTGCAAAATTT+GGG | - | chr1.2:30760787-30760806 | MS.gene41352:CDS | 25.0% |
| ! | GTTCAATTTAGATGTCTTTA+AGG | - | chr1.2:30761003-30761022 | MS.gene41352:CDS | 25.0% |
| ! | TAAAACTAATAGGTGAACTT+GGG | - | chr1.2:30762394-30762413 | MS.gene41352:CDS | 25.0% |
| ! | TAACATGGCTATATAATTTC+AGG | - | chr1.2:30762472-30762491 | MS.gene41352:intron | 25.0% |
| !! | TAATATTCTGGGAAATCAAT+GGG | - | chr1.2:30762731-30762750 | MS.gene41352:intron | 25.0% |
| AAATCTTTGTGTGTAACAAG+TGG | + | chr1.2:30760856-30760875 | None:intergenic | 30.0% | |
| AGCCATATATAGGAAAATTG+AGG | - | chr1.2:30761964-30761983 | MS.gene41352:CDS | 30.0% | |
| ATGATATGATCCAACTAACA+TGG | - | chr1.2:30762457-30762476 | MS.gene41352:CDS | 30.0% | |
| ATGTTAGCTAATTCTGGATT+TGG | + | chr1.2:30761843-30761862 | None:intergenic | 30.0% | |
| ATTATTAGCAGAAGAGAAAC+TGG | - | chr1.2:30762654-30762673 | MS.gene41352:intron | 30.0% | |
| CAAATCAAATGGCATATATC+CGG | - | chr1.2:30761145-30761164 | MS.gene41352:CDS | 30.0% | |
| CATGATTCCGAAAATGTATT+TGG | + | chr1.2:30761931-30761950 | None:intergenic | 30.0% | |
| GAAAGATTTACAATTAGCCA+TGG | - | chr1.2:30762618-30762637 | MS.gene41352:intron | 30.0% | |
| GAGTTTCCTTTGATGAAAAA+TGG | - | chr1.2:30761438-30761457 | MS.gene41352:intron | 30.0% | |
| GGCTAATTGTAAATCTTTCT+CGG | + | chr1.2:30762617-30762636 | None:intergenic | 30.0% | |
| GTAAAACTAATAGGTGAACT+TGG | - | chr1.2:30762393-30762412 | MS.gene41352:CDS | 30.0% | |
| TAATTTAGATGATGCTTCCA+TGG | + | chr1.2:30762638-30762657 | None:intergenic | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr1.2:30761274-30761293 | None:intergenic | 30.0% | |
| TCATTCCATGGTACATATTT+AGG | + | chr1.2:30761262-30761281 | None:intergenic | 30.0% | |
| TCTCGTAAATTCAACACTAT+CGG | - | chr1.2:30762829-30762848 | MS.gene41352:CDS | 30.0% | |
| TGCGATTGTTCAATTTCAAT+AGG | + | chr1.2:30761177-30761196 | None:intergenic | 30.0% | |
| TGGATTATGTTAGCTAATTC+TGG | + | chr1.2:30761849-30761868 | None:intergenic | 30.0% | |
| TTGCAAAATTTGGGTCTTAA+TGG | - | chr1.2:30760796-30760815 | MS.gene41352:CDS | 30.0% | |
| ! | AATATTCTGGGAAATCAATG+GGG | - | chr1.2:30762732-30762751 | MS.gene41352:intron | 30.0% |
| ! | ACTTGTTACACACAAAGATT+TGG | - | chr1.2:30760855-30760874 | MS.gene41352:CDS | 30.0% |
| ! | AGTAACACTGAAACGAATTT+TGG | - | chr1.2:30760750-30760769 | MS.gene41352:CDS | 30.0% |
| ! | CGGTTTACTACTTTATTTAG+AGG | + | chr1.2:30761043-30761062 | None:intergenic | 30.0% |
| ! | GTAATATTCTGGGAAATCAA+TGG | - | chr1.2:30762730-30762749 | MS.gene41352:intron | 30.0% |
| ! | TGCCTCAATTTTCCTATATA+TGG | + | chr1.2:30761969-30761988 | None:intergenic | 30.0% |
| ! | TGTTTTGTGAAATGTGACTT+TGG | - | chr1.2:30762309-30762328 | MS.gene41352:intron | 30.0% |
| !! | TTTCAGGTTTATACCGATAT+AGG | - | chr1.2:30762488-30762507 | MS.gene41352:intron | 30.0% |
| !!! | TCATCCCTATACATTTTTTG+TGG | + | chr1.2:30761869-30761888 | None:intergenic | 30.0% |
| AAACAGTTCAAAACAAGAGG+GGG | - | chr1.2:30761489-30761508 | MS.gene41352:CDS | 35.0% | |
| AATGTATAGGGATGAACAAC+TGG | - | chr1.2:30761874-30761893 | MS.gene41352:CDS | 35.0% | |
| AATTGAGAACCTGCTCATAT+AGG | + | chr1.2:30761329-30761348 | None:intergenic | 35.0% | |
| AGCAAACAGTTCAAAACAAG+AGG | - | chr1.2:30761486-30761505 | MS.gene41352:CDS | 35.0% | |
| ATGTTCCTTTCCTAACAACT+CGG | + | chr1.2:30762867-30762886 | None:intergenic | 35.0% | |
| CAAAACTCAAGTTCATTCGT+AGG | - | chr1.2:30762554-30762573 | MS.gene41352:intron | 35.0% | |
| CAAACAGTTCAAAACAAGAG+GGG | - | chr1.2:30761488-30761507 | MS.gene41352:CDS | 35.0% | |
| CTCGTAAATTCAACACTATC+GGG | - | chr1.2:30762830-30762849 | MS.gene41352:CDS | 35.0% | |
| CTTGATCATTACTTGGGATT+AGG | - | chr1.2:30762898-30762917 | MS.gene41352:CDS | 35.0% | |
| GAACAATATTCTTGCAGTTC+TGG | - | chr1.2:30761220-30761239 | MS.gene41352:intron | 35.0% | |
| GATTGAATGTTGCAACTGTT+TGG | - | chr1.2:30762774-30762793 | MS.gene41352:CDS | 35.0% | |
| GCAAACAGTTCAAAACAAGA+GGG | - | chr1.2:30761487-30761506 | MS.gene41352:CDS | 35.0% | |
| GCTCTTTAGATAAATCGACA+TGG | + | chr1.2:30762699-30762718 | None:intergenic | 35.0% | |
| GGTTCTTACTAGCAGAATTA+CGG | - | chr1.2:30761779-30761798 | MS.gene41352:CDS | 35.0% | |
| GTTTATACCGATATAGGCTA+GGG | - | chr1.2:30762494-30762513 | MS.gene41352:intron | 35.0% | |
| TATAAGACACCAAGATGTGT+AGG | - | chr1.2:30762937-30762956 | MS.gene41352:CDS | 35.0% | |
| TATGCTGTGTTTCCTCAAAA+TGG | - | chr1.2:30762089-30762108 | MS.gene41352:CDS | 35.0% | |
| TCCTTTGATGAAAAATGGGA+AGG | - | chr1.2:30761443-30761462 | MS.gene41352:intron | 35.0% | |
| TCGATTTATCTAAAGAGCCA+GGG | - | chr1.2:30762701-30762720 | MS.gene41352:intron | 35.0% | |
| TCGTAAATTCAACACTATCG+GGG | - | chr1.2:30762831-30762850 | MS.gene41352:CDS | 35.0% | |
| TGGACTATGTTATGAGCAAA+TGG | + | chr1.2:30761702-30761721 | None:intergenic | 35.0% | |
| TTTATACCGATATAGGCTAG+GGG | - | chr1.2:30762495-30762514 | MS.gene41352:intron | 35.0% | |
| TTTGTGGCGATATAAGAGAA+GGG | - | chr1.2:30761757-30761776 | MS.gene41352:CDS | 35.0% | |
| ! | AACACTGAAACGAATTTTGG+AGG | - | chr1.2:30760753-30760772 | MS.gene41352:CDS | 35.0% |
| ! | ACATTTTCGGAATCATGAGT+GGG | - | chr1.2:30761934-30761953 | MS.gene41352:CDS | 35.0% |
| ! | AGGGCACTATGTAATATTCT+GGG | - | chr1.2:30762720-30762739 | MS.gene41352:intron | 35.0% |
| ! | CCTAACGCCAAATACATTTT+CGG | - | chr1.2:30761921-30761940 | MS.gene41352:CDS | 35.0% |
| ! | CTACGAATGAACTTGAGTTT+TGG | + | chr1.2:30762556-30762575 | None:intergenic | 35.0% |
| ! | TACATTTTCGGAATCATGAG+TGG | - | chr1.2:30761933-30761952 | MS.gene41352:CDS | 35.0% |
| !! | AACTCGAAGTATCCATTTTG+AGG | + | chr1.2:30762104-30762123 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGGAGTTGAGTTA+TGG | + | chr1.2:30762543-30762562 | None:intergenic | 35.0% |
| ACACATGACTTGAAACTCTC+AGG | + | chr1.2:30760832-30760851 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAAATC+AGG | + | chr1.2:30762077-30762096 | None:intergenic | 40.0% | |
| AGCATAAGTTGCCAAATCAG+GGG | + | chr1.2:30762075-30762094 | None:intergenic | 40.0% | |
| ATAGGGATGAACAACTGGTA+TGG | - | chr1.2:30761879-30761898 | MS.gene41352:CDS | 40.0% | |
| ATATTGCAGTCCAGATGAAG+TGG | - | chr1.2:30761590-30761609 | MS.gene41352:CDS | 40.0% | |
| ATGTTATACGCATGCAGTGA+AGG | - | chr1.2:30761554-30761573 | MS.gene41352:CDS | 40.0% | |
| ATTGTTGTGACCAATTCAGC+AGG | - | chr1.2:30762221-30762240 | MS.gene41352:CDS | 40.0% | |
| CAGAACCTTTGAACAAGTGT+GGG | - | chr1.2:30761728-30761747 | MS.gene41352:CDS | 40.0% | |
| CAGAATATTACATAGTGCCC+TGG | + | chr1.2:30762721-30762740 | None:intergenic | 40.0% | |
| CAGCATAAGTTGCCAAATCA+GGG | + | chr1.2:30762076-30762095 | None:intergenic | 40.0% | |
| CCGAAAATGTATTTGGCGTT+AGG | + | chr1.2:30761924-30761943 | None:intergenic | 40.0% | |
| CCTCTAGTGACTTCTATCTA+CGG | - | chr1.2:30762005-30762024 | MS.gene41352:CDS | 40.0% | |
| CTAGTACTTACCTGCTGAAT+TGG | + | chr1.2:30762234-30762253 | None:intergenic | 40.0% | |
| CTGTCACTGCTATGTCTTTA+AGG | - | chr1.2:30760935-30760954 | MS.gene41352:CDS | 40.0% | |
| CTTAAAGACATAGCAGTGAC+AGG | + | chr1.2:30760937-30760956 | None:intergenic | 40.0% | |
| CTTTGTGGCGATATAAGAGA+AGG | - | chr1.2:30761756-30761775 | MS.gene41352:CDS | 40.0% | |
| GACATAGCCATTCGAATAGA+TGG | + | chr1.2:30761807-30761826 | None:intergenic | 40.0% | |
| GATAAGTCTTTCATCGATGC+AGG | - | chr1.2:30762796-30762815 | MS.gene41352:CDS | 40.0% | |
| GGAAGCCTAAATATGTACCA+TGG | - | chr1.2:30761254-30761273 | MS.gene41352:intron | 40.0% | |
| GGACAAAATACCACTTCATC+TGG | + | chr1.2:30761603-30761622 | None:intergenic | 40.0% | |
| GGTTTATACCGATATAGGCT+AGG | - | chr1.2:30762493-30762512 | MS.gene41352:intron | 40.0% | |
| TACGGTTCCATCTATTCGAA+TGG | - | chr1.2:30761797-30761816 | MS.gene41352:CDS | 40.0% | |
| TCAGAACCTTTGAACAAGTG+TGG | - | chr1.2:30761727-30761746 | MS.gene41352:CDS | 40.0% | |
| TGTGCAAAACCTACACATCT+TGG | + | chr1.2:30762949-30762968 | None:intergenic | 40.0% | |
| TTCACTGCATGCGTATAACA+TGG | + | chr1.2:30761555-30761574 | None:intergenic | 40.0% | |
| TTGTGGCGATATAAGAGAAG+GGG | - | chr1.2:30761758-30761777 | MS.gene41352:CDS | 40.0% | |
| ! | ACAGGCTTTGTAGTGAGAAT+AGG | + | chr1.2:30760919-30760938 | None:intergenic | 40.0% |
| ! | CAGGGCACTATGTAATATTC+TGG | - | chr1.2:30762719-30762738 | MS.gene41352:intron | 40.0% |
| ! | GGAAAATTGAGGCATTATGC+AGG | - | chr1.2:30761975-30761994 | MS.gene41352:CDS | 40.0% |
| ! | GTCGATTTATCTAAAGAGCC+AGG | - | chr1.2:30762700-30762719 | MS.gene41352:intron | 40.0% |
| !! | GCCTTCCCATTTTTCATCAA+AGG | + | chr1.2:30761447-30761466 | None:intergenic | 40.0% |
| !! | GTTCAAAGGTTCTGAAAGCT+TGG | + | chr1.2:30761722-30761741 | None:intergenic | 40.0% |
| AGGGGACGTGGTAAAAGTTA+TGG | - | chr1.2:30762513-30762532 | MS.gene41352:intron | 45.0% | |
| CAATTTCAATAGGCGTGCTC+CGG | + | chr1.2:30761167-30761186 | None:intergenic | 45.0% | |
| CCAAATCAGGGGGAAGTTTA+GGG | + | chr1.2:30762064-30762083 | None:intergenic | 45.0% | |
| CCGTAGATAGAAGTCACTAG+AGG | + | chr1.2:30762008-30762027 | None:intergenic | 45.0% | |
| CCTAACAACTCGGAGTTCTA+AGG | + | chr1.2:30762857-30762876 | None:intergenic | 45.0% | |
| CCTGCTCATATAGGCAAAAG+AGG | + | chr1.2:30761320-30761339 | None:intergenic | 45.0% | |
| CCTTAGAACTCCGAGTTGTT+AGG | - | chr1.2:30762854-30762873 | MS.gene41352:CDS | 45.0% | |
| CTATCTACGGAGCTTCTGAA+GGG | - | chr1.2:30762018-30762037 | MS.gene41352:CDS | 45.0% | |
| CTCACACAGCTTAGCAATGA+GGG | - | chr1.2:30762131-30762150 | MS.gene41352:CDS | 45.0% | |
| CTCGTAGCTACGACTATTAC+AGG | - | chr1.2:30761513-30761532 | MS.gene41352:CDS | 45.0% | |
| CTCTTCCCACACTTGTTCAA+AGG | + | chr1.2:30761736-30761755 | None:intergenic | 45.0% | |
| GAACTCCGAGTTGTTAGGAA+AGG | - | chr1.2:30762859-30762878 | MS.gene41352:CDS | 45.0% | |
| GCATAAGTTGCCAAATCAGG+GGG | + | chr1.2:30762074-30762093 | None:intergenic | 45.0% | |
| GGGGACGTGGTAAAAGTTAT+GGG | - | chr1.2:30762514-30762533 | MS.gene41352:intron | 45.0% | |
| GGGTCTATGGAGCCATATAT+AGG | - | chr1.2:30761954-30761973 | MS.gene41352:CDS | 45.0% | |
| TCATTGCTAAGCTGTGTGAG+AGG | + | chr1.2:30762131-30762150 | None:intergenic | 45.0% | |
| TCTATCTACGGAGCTTCTGA+AGG | - | chr1.2:30762017-30762036 | MS.gene41352:CDS | 45.0% | |
| TCTCACACAGCTTAGCAATG+AGG | - | chr1.2:30762130-30762149 | MS.gene41352:CDS | 45.0% | |
| TTGGCGTTAGGAAACAACTC+TGG | + | chr1.2:30761912-30761931 | None:intergenic | 45.0% | |
| ! | ATTTCCTTTGCGCTGATCCT+CGG | - | chr1.2:30762156-30762175 | MS.gene41352:CDS | 45.0% |
| ! | CCTCTTTTGCCTATATGAGC+AGG | - | chr1.2:30761317-30761336 | MS.gene41352:intron | 45.0% |
| !! | AAGTGGACTGATTTACTGCG+AGG | - | chr1.2:30761656-30761675 | MS.gene41352:CDS | 45.0% |
| AACTGAGTGCAGATGCAGCA+AGG | - | chr1.2:30760719-30760738 | MS.gene41352:CDS | 50.0% | |
| ACTGAGTGCAGATGCAGCAA+GGG | - | chr1.2:30760720-30760739 | MS.gene41352:CDS | 50.0% | |
| CAAGTGTGGGAAGAGCTTTG+TGG | - | chr1.2:30761741-30761760 | MS.gene41352:CDS | 50.0% | |
| CCCTAAACTTCCCCCTGATT+TGG | - | chr1.2:30762061-30762080 | MS.gene41352:CDS | 50.0% | |
| CGGAATCATGAGTGGGTCTA+TGG | - | chr1.2:30761941-30761960 | MS.gene41352:CDS | 50.0% | |
| GCCAAATCAGGGGGAAGTTT+AGG | + | chr1.2:30762065-30762084 | None:intergenic | 50.0% | |
| ! | GCAGTTCTGGCACTACTCAA+GGG | - | chr1.2:30761233-30761252 | MS.gene41352:intron | 50.0% |
| ! | TGCAGTTCTGGCACTACTCA+AGG | - | chr1.2:30761232-30761251 | MS.gene41352:intron | 50.0% |
| CCACGTCCCCTAGCCTATAT+CGG | + | chr1.2:30762504-30762523 | None:intergenic | 55.0% | |
| AGTGGGGCTCACTGAGGTGA+AGG | - | chr1.2:30762181-30762200 | MS.gene41352:CDS | 60.0% | |
| CCGATATAGGCTAGGGGACG+TGG | - | chr1.2:30762501-30762520 | MS.gene41352:intron | 60.0% | |
| GGGCTCACTGAGGTGAAGGT+TGG | - | chr1.2:30762185-30762204 | MS.gene41352:CDS | 60.0% | |
| TTCACCTCAGTGAGCCCCAC+TGG | + | chr1.2:30762182-30762201 | None:intergenic | 60.0% | |
| CTGGCCGAGGATCAGCGCAA+AGG | + | chr1.2:30762163-30762182 | None:intergenic | 65.0% | |
| ! | TGCGCTGATCCTCGGCCAGT+GGG | - | chr1.2:30762164-30762183 | MS.gene41352:CDS | 65.0% |
| ! | TTGCGCTGATCCTCGGCCAG+TGG | - | chr1.2:30762163-30762182 | MS.gene41352:CDS | 65.0% |
| TCAGTGAGCCCCACTGGCCG+AGG | + | chr1.2:30762176-30762195 | None:intergenic | 70.0% | |
| TCGGCCAGTGGGGCTCACTG+AGG | - | chr1.2:30762175-30762194 | MS.gene41352:CDS | 70.0% | |
| ! | GCGCTGATCCTCGGCCAGTG+GGG | - | chr1.2:30762165-30762184 | MS.gene41352:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 30760691 | 30763035 | 30760691 | ID=MS.gene41352 |
| chr1.2 | mRNA | 30760691 | 30763035 | 30760691 | ID=MS.gene41352.t1;Parent=MS.gene41352 |
| chr1.2 | exon | 30762770 | 30763035 | 30762770 | ID=MS.gene41352.t1.exon1;Parent=MS.gene41352.t1 |
| chr1.2 | CDS | 30762770 | 30763035 | 30762770 | ID=cds.MS.gene41352.t1;Parent=MS.gene41352.t1 |
| chr1.2 | exon | 30762388 | 30762489 | 30762388 | ID=MS.gene41352.t1.exon2;Parent=MS.gene41352.t1 |
| chr1.2 | CDS | 30762388 | 30762489 | 30762388 | ID=cds.MS.gene41352.t1;Parent=MS.gene41352.t1 |
| chr1.2 | exon | 30761484 | 30762289 | 30761484 | ID=MS.gene41352.t1.exon3;Parent=MS.gene41352.t1 |
| chr1.2 | CDS | 30761484 | 30762289 | 30761484 | ID=cds.MS.gene41352.t1;Parent=MS.gene41352.t1 |
| chr1.2 | exon | 30760691 | 30761232 | 30760691 | ID=MS.gene41352.t1.exon4;Parent=MS.gene41352.t1 |
| chr1.2 | CDS | 30760691 | 30761232 | 30760691 | ID=cds.MS.gene41352.t1;Parent=MS.gene41352.t1 |
| Gene Sequence |
| Protein sequence |
