AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42221

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42221.t1 MTR_7g076080 98.329 778 13 0 1 778 1 778 0.0 1588
MS.gene42221.t1 MTR_8g432540 80.832 793 125 11 1 778 30 810 0.0 1280
MS.gene42221.t1 MTR_1g101280 64.219 749 230 9 53 775 15 751 0.0 952
MS.gene42221.t1 MTR_4g047800 53.482 761 313 13 30 778 2 733 0.0 779
MS.gene42221.t1 MTR_2g088470 54.654 752 306 14 37 777 8 735 0.0 775
MS.gene42221.t1 MTR_0198s0030 51.963 764 313 16 44 774 9 751 0.0 769
MS.gene42221.t1 MTR_6g477820 48.523 711 331 10 91 778 29 727 0.0 664
MS.gene42221.t1 MTR_5g029320 43.893 745 375 18 55 774 52 778 0.0 605
MS.gene42221.t1 MTR_2g101720 43.642 692 339 11 95 777 143 792 0.0 604
MS.gene42221.t1 MTR_5g005600 43.497 715 363 13 74 774 29 716 0.0 546
MS.gene42221.t1 MTR_7g427710 42.897 711 307 17 85 776 10 640 2.46e-178 526
MS.gene42221.t1 MTR_2g030570 34.825 715 436 13 67 774 4 695 1.34e-136 420
MS.gene42221.t1 MTR_2g030600 34.081 713 437 14 67 774 4 688 1.52e-128 399
MS.gene42221.t1 MTR_2g030660 32.203 708 406 22 78 774 3 647 5.02e-101 326
MS.gene42221.t1 MTR_7g427690 43.077 390 194 8 285 666 57 426 1.63e-97 310
MS.gene42221.t1 MTR_2g083350 34.280 528 296 11 289 778 21 535 5.16e-86 283
MS.gene42221.t1 MTR_2g083330 32.634 524 305 8 290 778 19 529 2.24e-80 268
MS.gene42221.t1 MTR_7g427700 38.889 324 138 5 85 402 10 279 2.14e-63 219
MS.gene42221.t1 MTR_7g427700 45.679 162 69 5 625 776 281 433 2.13e-30 125
MS.gene42221.t1 MTR_0653s0020 40.376 213 108 5 468 678 1 196 1.33e-45 162
MS.gene42221.t1 MTR_5g046040 49.645 141 70 1 91 230 33 173 2.85e-40 152
MS.gene42221.t1 MTR_7g027265 55.833 120 53 0 91 210 17 136 3.54e-40 144
MS.gene42221.t1 MTR_2g030690 32.082 293 174 10 491 774 1 277 9.28e-29 117
MS.gene42221.t1 MTR_1g105420 32.394 213 107 6 146 344 1 190 1.81e-25 105
MS.gene42221.t1 MTR_0653s0010 51.220 123 43 4 664 776 1 116 1.47e-24 99.8
MS.gene42221.t1 MTR_2g451350 36.029 136 77 2 297 427 1 131 8.50e-22 92.4
MS.gene42221.t1 MTR_7g027605 49.462 93 44 2 373 465 2 91 2.47e-21 89.4
MS.gene42221.t1 MTR_6g027290 29.814 161 108 2 74 229 4 164 1.64e-19 87.0
MS.gene42221.t1 MTR_7g427670 42.222 90 40 2 145 233 32 110 6.07e-14 69.7
MS.gene42221.t1 MTR_2g451350 33.333 75 50 0 353 427 18 92 2.91e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42221.t1 AT4G00730 69.599 773 210 8 11 778 50 802 0.0 1066
MS.gene42221.t1 AT3G61150 64.838 802 230 13 1 778 34 807 0.0 1020
MS.gene42221.t1 AT4G04890 54.362 745 280 12 69 777 18 738 0.0 791
MS.gene42221.t1 AT4G04890 54.362 745 280 12 69 777 18 738 0.0 791
MS.gene42221.t1 AT4G21750 54.980 733 264 11 84 777 55 760 0.0 774
MS.gene42221.t1 AT4G21750 54.980 733 264 11 84 777 55 760 0.0 774
MS.gene42221.t1 AT4G21750 54.980 733 264 11 84 777 55 760 0.0 774
MS.gene42221.t1 AT4G21750 54.980 733 264 11 84 777 55 760 0.0 774
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 308 13 50 778 23 720 0.0 761
MS.gene42221.t1 AT1G05230 52.869 732 306 14 50 778 23 718 0.0 756
MS.gene42221.t1 AT5G52170 52.982 721 268 11 61 775 24 679 0.0 744
MS.gene42221.t1 AT5G52170 52.982 721 268 11 61 775 24 679 0.0 744
MS.gene42221.t1 AT5G52170 52.617 726 268 12 61 775 24 684 0.0 738
MS.gene42221.t1 AT4G00730 66.034 527 156 7 11 532 50 558 0.0 688
MS.gene42221.t1 AT1G73360 48.212 699 330 10 91 774 32 713 0.0 634
MS.gene42221.t1 AT1G17920 46.429 700 322 14 94 778 24 685 0.0 615
MS.gene42221.t1 AT1G17920 46.429 700 322 14 94 778 24 685 0.0 615
MS.gene42221.t1 AT1G05230 51.232 609 266 12 50 655 23 603 0.0 609
MS.gene42221.t1 AT2G32370 44.253 696 341 11 91 778 68 724 0.0 579
MS.gene42221.t1 AT1G79840 41.834 698 348 12 88 777 40 687 0.0 562
MS.gene42221.t1 AT1G79840 41.834 698 348 12 88 777 98 745 0.0 562
MS.gene42221.t1 AT1G79840 41.834 698 348 12 88 777 40 687 0.0 562
MS.gene42221.t1 AT1G79840 41.834 698 348 12 88 777 127 774 0.0 561
MS.gene42221.t1 AT5G46880 41.725 719 375 16 84 774 104 806 3.79e-176 527
MS.gene42221.t1 AT5G46880 41.725 719 375 16 84 774 104 806 3.79e-176 527
MS.gene42221.t1 AT5G46880 41.725 719 375 16 84 774 104 806 3.79e-176 527
MS.gene42221.t1 AT4G25530 40.223 716 364 18 73 778 25 686 1.63e-163 489
MS.gene42221.t1 AT1G79840 41.549 568 283 9 88 651 98 620 1.07e-154 465
MS.gene42221.t1 AT4G17710 40.115 693 335 18 89 774 84 703 1.36e-148 452
MS.gene42221.t1 AT3G03260 36.376 734 397 19 73 776 3 696 3.08e-143 437
MS.gene42221.t1 AT5G17320 34.553 738 424 20 73 777 7 718 3.45e-126 394
MS.gene42221.t1 AT1G34650 34.459 711 410 21 98 777 23 708 4.95e-115 364
MS.gene42221.t1 AT1G79840 40.583 446 218 7 88 530 98 499 7.18e-109 342
MS.gene42221.t1 AT3G03260 35.450 567 319 15 73 623 3 538 2.24e-105 334
MS.gene42221.t1 AT5G07260 27.679 560 323 16 157 712 10 491 1.80e-55 200
MS.gene42221.t1 AT5G07260 27.778 558 320 16 157 712 10 486 2.14e-55 199
MS.gene42221.t1 AT1G30490 40.000 100 53 3 79 174 6 102 9.37e-13 72.4

Find 171 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCTATTT+TGG 0.092193 7.3:-29683595 None:intergenic
CTAAGCTTTGGCATGGGTTT+TGG 0.160026 7.3:+29687504 MS.gene42221:CDS
GGCTCTTGTTGAAACTTTAA+TGG 0.179447 7.3:+29684501 MS.gene42221:CDS
CAGTTGTAGAGCACCATTTC+TGG 0.218972 7.3:-29685069 None:intergenic
ATGCCTTTAGGTCAAGATTT+TGG 0.233318 7.3:+29684169 MS.gene42221:CDS
TCAAACCATTATTTGTTTGA+TGG 0.255996 7.3:-29683232 None:intergenic
GAGTTTGGTAACGACGTAAT+TGG 0.264874 7.3:-29684097 None:intergenic
GTGATATCTAGTGGAATAAA+TGG 0.274598 7.3:+29685044 MS.gene42221:CDS
CACAAACTAATGAGCCTCTT+TGG 0.274681 7.3:+29684335 MS.gene42221:CDS
GATAACATGGATGGTATTTC+TGG 0.280364 7.3:+29683302 MS.gene42221:CDS
GGAATGTGGGCGAGGATGTT+AGG 0.285717 7.3:+29687889 MS.gene42221:CDS
AATTTCCATCAAACAAATAA+TGG 0.293878 7.3:+29683227 MS.gene42221:CDS
AGCTTCTCTGATGGTATCTA+TGG 0.310496 7.3:-29685343 None:intergenic
ACACTTGCCGGCAAGTTTCT+AGG 0.314978 7.3:+29684070 MS.gene42221:CDS
CCAATTTCTAAACTCGAGTT+TGG 0.322467 7.3:-29684112 None:intergenic
CCAAACTCGAGTTTAGAAAT+TGG 0.322627 7.3:+29684112 MS.gene42221:CDS
AAACAAGACAAGTCAAGTTT+TGG 0.322654 7.3:+29683570 MS.gene42221:CDS
ACTTAGCAAAAGGCTTTGTT+TGG 0.341498 7.3:+29683547 MS.gene42221:CDS
TATGTTTCTTGAACTTGCTT+TGG 0.349553 7.3:+29684285 MS.gene42221:CDS
AACTGTAGGAGGCTTCCTTC+TGG 0.355417 7.3:+29685390 MS.gene42221:CDS
TTGCCTTCAACAATGCCTTT+AGG 0.357400 7.3:+29684157 MS.gene42221:CDS
GACCGAGTTTGTACACTTGC+CGG 0.358469 7.3:+29684058 MS.gene42221:CDS
CACAAAAGTTGTTTGTCATT+CGG 0.369193 7.3:-29687818 None:intergenic
TGAACTTGCTTTGGCTGCAA+TGG 0.370269 7.3:+29684294 MS.gene42221:CDS
AAATCCATGTTCAACTCATC+TGG 0.372663 7.3:+29683034 MS.gene42221:CDS
GCTACTTTGACTTGAATTAA+CGG 0.376239 7.3:-29689221 None:intergenic
TCGTTTATCAACTCCTACTT+TGG 0.381588 7.3:+29683009 MS.gene42221:CDS
ATTATTAGTACTCCTTGTAT+TGG 0.382879 7.3:+29684412 MS.gene42221:CDS
GAAATTTCACTAATAATTGC+TGG 0.383011 7.3:-29683983 None:intergenic
GCCTCAGAAACAAAACCATT+TGG 0.385246 7.3:-29684442 None:intergenic
TGGTGATATGAAGAGATTAA+TGG 0.385985 7.3:+29683199 MS.gene42221:CDS
TTCATTACTACATGCATTGC+AGG 0.386925 7.3:-29689313 None:intergenic
GTCTATAAAGCTGGTGAACT+TGG 0.390142 7.3:-29687476 None:intergenic
GTGCATCGACGGTGCACAAA+TGG 0.392526 7.3:+29687850 MS.gene42221:CDS
TTTGTTCCTCTTGTAATTGA+AGG 0.396389 7.3:-29684211 None:intergenic
TATGCCAAATGGTTACTCTA+AGG 0.401101 7.3:+29685428 MS.gene42221:CDS
AGCAGCATGCAGAAGGGGTA+TGG 0.402136 7.3:+29685304 MS.gene42221:CDS
TTGATTATATCAGACTCAAT+TGG 0.408893 7.3:+29683853 MS.gene42221:intron
GTTGCCATGGTCATGTCCTT+TGG 0.409163 7.3:-29688096 None:intergenic
AATTACAAGAGGAACAAATA+TGG 0.409950 7.3:+29684216 MS.gene42221:CDS
GTAGACTGTTCACAAGTATC+TGG 0.411280 7.3:-29689471 None:intergenic
GACATTCACATTGGCGTTGT+AGG 0.411890 7.3:-29687548 None:intergenic
CTCTCGTCGCTATGTCCATC+TGG 0.415417 7.3:-29689388 None:intergenic
TATAGACCCTTGCTAAGCTT+TGG 0.417553 7.3:+29687492 MS.gene42221:CDS
GGAATAAATGGAACCAGAAA+TGG 0.422357 7.3:+29685056 MS.gene42221:CDS
ATTACCTTAGAGTAACCATT+TGG 0.422663 7.3:-29685432 None:intergenic
CTCTTGCATTGGACCACCAT+TGG 0.426296 7.3:-29688060 None:intergenic
TGGACGGCCTAGAAACTTGC+CGG 0.428194 7.3:-29684077 None:intergenic
GAACATGAAAGCTGCAGATC+TGG 0.433822 7.3:+29683275 MS.gene42221:CDS
AAGGAAGAGTGTGGATGATC+CGG 0.443006 7.3:+29687920 MS.gene42221:CDS
TGTATTGGTTTAAAACCAAA+TGG 0.443568 7.3:+29684427 MS.gene42221:CDS
TGACCTAAAGGCATTGTTGA+AGG 0.455945 7.3:-29684160 None:intergenic
CAGAAATGGTGCTCTACAAC+TGG 0.456843 7.3:+29685070 MS.gene42221:CDS
GGTTGTGAGATTGCACTAGA+AGG 0.460615 7.3:-29682986 None:intergenic
GAAACAAGCACAGACGCATC+GGG 0.460821 7.3:+29689259 MS.gene42221:CDS
TTAGTGCTGCAACCTCAGTT+TGG 0.466065 7.3:+29687964 MS.gene42221:CDS
GAATGTGGGCGAGGATGTTA+GGG 0.467377 7.3:+29687890 MS.gene42221:CDS
AGAAAACTCACCTCACGAAC+AGG 0.469601 7.3:-29685270 None:intergenic
CCCTTGCTAAGCTTTGGCAT+GGG 0.473830 7.3:+29687498 MS.gene42221:CDS
TTATGTTGCGCTTCTTCCGT+CGG 0.480355 7.3:+29689351 MS.gene42221:CDS
AAAGACTTGAACTTAGCAAA+AGG 0.481146 7.3:+29683537 MS.gene42221:CDS
ACATTCACATTGGCGTTGTA+GGG 0.489375 7.3:-29687547 None:intergenic
ACGAGAAGCTTAGAAGTGAA+TGG 0.489778 7.3:+29688027 MS.gene42221:CDS
TATGTTGCGCTTCTTCCGTC+GGG 0.492269 7.3:+29689352 MS.gene42221:CDS
GATGATCCGGGTGAGCCACC+AGG 0.494229 7.3:+29687933 MS.gene42221:CDS
ACAATCCCTGGTGGCTCACC+CGG 0.495851 7.3:-29687939 None:intergenic
TGGATTAGAAGTGTTGAAAG+TGG 0.496742 7.3:+29684355 MS.gene42221:CDS
AAATGGAACAAATTGAATGC+AGG 0.506251 7.3:+29687867 MS.gene42221:CDS
GCTTCTTCCGTCGGGTTTCG+CGG 0.507324 7.3:+29689360 MS.gene42221:CDS
ACCCTTGCTAAGCTTTGGCA+TGG 0.507775 7.3:+29687497 MS.gene42221:CDS
CACGGTGGAATCAGTGGAAA+CGG 0.508426 7.3:+29689507 MS.gene42221:CDS
ATGCCAAAATCTTGACCTAA+AGG 0.510136 7.3:-29684172 None:intergenic
CCTCCTACAGTTAAGAAAAG+TGG 0.511269 7.3:-29685379 None:intergenic
TGCAGAAGGGGTATGGGCAG+TGG 0.512805 7.3:+29685311 MS.gene42221:CDS
ACTTCAAGTACTTTCTCCAT+TGG 0.513136 7.3:+29685245 MS.gene42221:CDS
CAAATTGAATGCAGGGAATG+TGG 0.514653 7.3:+29687875 MS.gene42221:CDS
CGAGAAGCTTAGAAGTGAAT+GGG 0.514863 7.3:+29688028 MS.gene42221:CDS
TGCATTGCAGGAATATCTAC+AGG 0.520921 7.3:-29689301 None:intergenic
CCTCCACAATTTGAACACAT+TGG 0.521367 7.3:-29683959 None:intergenic
AATCCAATGTGTTCAAATTG+TGG 0.530145 7.3:+29683956 MS.gene42221:CDS
ACTAGATATCACTTCAGTTG+TGG 0.533585 7.3:-29685033 None:intergenic
GAGGCTTCCTTCTGGTTGTG+TGG 0.534040 7.3:+29685398 MS.gene42221:CDS
TTCTAAGCTTCTCGTTGCGA+AGG 0.534552 7.3:-29688019 None:intergenic
CACCGTCGATGCACAAACTC+CGG 0.536497 7.3:-29687841 None:intergenic
CTCCTACAGTTAAGAAAAGT+GGG 0.539174 7.3:-29685378 None:intergenic
AGGAAGAGTGTGGATGATCC+GGG 0.542002 7.3:+29687921 MS.gene42221:CDS
TCTGAGGCTTCTAGAGAAAG+TGG 0.543217 7.3:+29684457 MS.gene42221:CDS
TCAAGTTCTTGAATTTGTTG+AGG 0.544285 7.3:-29683383 None:intergenic
AACATGGATTTAACCAAAGT+AGG 0.544723 7.3:-29683022 None:intergenic
AAATAGAAGAACACAAATGA+AGG 0.546022 7.3:+29683598 MS.gene42221:CDS
CATATGATATGCAGGTGACA+TGG 0.546821 7.3:+29687427 MS.gene42221:intron
GCAGCATGCAGAAGGGGTAT+GGG 0.548640 7.3:+29685305 MS.gene42221:CDS
CAGATCTGGTAGTGATAACA+TGG 0.549386 7.3:+29683289 MS.gene42221:CDS
TGCCGGAGTTTGTGCATCGA+CGG 0.549484 7.3:+29687839 MS.gene42221:CDS
TTAGCAAGGGTCTATAAAGC+TGG 0.550046 7.3:-29687485 None:intergenic
TCCATTGGTTCCTGTTCGTG+AGG 0.554096 7.3:+29685260 MS.gene42221:CDS
GGTAATGACAAGGAAGAGTG+TGG 0.554273 7.3:+29687911 MS.gene42221:CDS
GCGTCGCAGCGGAGAGCGAG+TGG 0.554898 7.3:+29689427 MS.gene42221:CDS
ATGTGAGCCATCTCTTGCAT+TGG 0.555705 7.3:-29688071 None:intergenic
AGAAACAAGCACAGACGCAT+CGG 0.558699 7.3:+29689258 MS.gene42221:CDS
TTCATACACTAGCTCGTAGG+AGG 0.559359 7.3:-29688127 None:intergenic
AATGGAACAAATTGAATGCA+GGG 0.560654 7.3:+29687868 MS.gene42221:CDS
TCAACACTTCTAATCCAAAG+AGG 0.561610 7.3:-29684349 None:intergenic
TGTTGTTATCATAAACAGCT+TGG 0.566826 7.3:+29684480 MS.gene42221:CDS
GCAGCACTAAGCACAATCCC+TGG 0.567724 7.3:-29687951 None:intergenic
ATACCTGAGTGTTCTCTAGA+GGG 0.568456 7.3:-29687597 None:intergenic
ACCCATGCCAAAGCTTAGCA+AGG 0.570942 7.3:-29687499 None:intergenic
ACCTCACGAACAGGAACCAA+TGG 0.570995 7.3:-29685261 None:intergenic
ACCATCAGAGAAGCTTCAGC+TGG 0.571588 7.3:+29685351 MS.gene42221:CDS
AAATTGAATGCAGGGAATGT+GGG 0.572870 7.3:+29687876 MS.gene42221:CDS
GTAACAAATACTAATAGTAA+TGG 0.574242 7.3:+29684238 MS.gene42221:CDS
CTGTTGTATAACAGAATCGA+TGG 0.574417 7.3:+29684976 MS.gene42221:intron
GAGCTTCTTGCAATCACACA+AGG 0.574571 7.3:-29685011 None:intergenic
AATGGATGAGTTAGTGAAGA+TGG 0.583650 7.3:+29684312 MS.gene42221:CDS
AAACAAATAATGGTTTGAGA+AGG 0.592932 7.3:+29683237 MS.gene42221:CDS
ACAACTGAAGTGATATCTAG+TGG 0.593868 7.3:+29685035 MS.gene42221:CDS
GGTTTCGCGGTGTTACCAGA+TGG 0.594347 7.3:+29689373 MS.gene42221:CDS
TGGTGGTCCAATGCAAGAGA+TGG 0.598545 7.3:+29688064 MS.gene42221:CDS
TTGCAAGCAGCATGCAGAAG+GGG 0.600217 7.3:+29685299 MS.gene42221:CDS
ACCAGCTGAAGCTTCTCTGA+TGG 0.600752 7.3:-29685352 None:intergenic
CTATGTGTAGCAATAAGTGC+GGG 0.601374 7.3:+29687765 MS.gene42221:intron
GTGGTTCAAGATATGCCAAA+TGG 0.603358 7.3:+29685417 MS.gene42221:CDS
TTAATCATGAGGAATATACA+AGG 0.603991 7.3:+29684389 MS.gene42221:CDS
GTTCCTCTTGTAATTGAAGG+TGG 0.608032 7.3:-29684208 None:intergenic
TCACCACCTTCAATTACAAG+AGG 0.610841 7.3:+29684205 MS.gene42221:CDS
GGAGGGAGACACAGTTGCCA+TGG 0.612613 7.3:-29688109 None:intergenic
GAATTTGTTGAGGAGTGTGT+CGG 0.614112 7.3:-29683373 None:intergenic
TATACCTGAGTGTTCTCTAG+AGG 0.615802 7.3:-29687598 None:intergenic
GAATGCAGGGAATGTGGGCG+AGG 0.618902 7.3:+29687881 MS.gene42221:CDS
AAAGCTCACGGTGGAATCAG+TGG 0.620306 7.3:+29689501 MS.gene42221:CDS
ATATGATATGCAGGTGACAT+GGG 0.623259 7.3:+29687428 MS.gene42221:intron
TCTACCGACGGCAAAGCTCA+CGG 0.625543 7.3:+29689489 MS.gene42221:CDS
GTCACGAGAATTCACTACTT+AGG 0.625972 7.3:+29683879 MS.gene42221:CDS
TCTGGTAGTGATAACATGGA+TGG 0.630519 7.3:+29683293 MS.gene42221:CDS
TGCCGGCAAGTGTACAAACT+CGG 0.632620 7.3:-29684060 None:intergenic
TTTGCAAGCAGCATGCAGAA+GGG 0.633056 7.3:+29685298 MS.gene42221:CDS
CCCATGCCAAAGCTTAGCAA+GGG 0.633382 7.3:-29687498 None:intergenic
TAAACCAGATGAGTTGAACA+TGG 0.634149 7.3:-29683038 None:intergenic
AGATTGCTAGACATTCACAT+TGG 0.639066 7.3:-29687557 None:intergenic
TGGGACATACTTTCCAATGG+TGG 0.644145 7.3:+29688047 MS.gene42221:CDS
TCTTGAACCACACAACCAGA+AGG 0.644378 7.3:-29685405 None:intergenic
CCTATGTGTAGCAATAAGTG+CGG 0.644689 7.3:+29687764 MS.gene42221:intron
GAATGGGACATACTTTCCAA+TGG 0.645146 7.3:+29688044 MS.gene42221:CDS
TACCTGAGTGTTCTCTAGAG+GGG 0.647124 7.3:-29687596 None:intergenic
TCCACCGTGAGCTTTGCCGT+CGG 0.651579 7.3:-29689493 None:intergenic
TTGGTAACGACGTAATTGGA+CGG 0.652910 7.3:-29684093 None:intergenic
ATATTCATACACTAGCTCGT+AGG 0.653193 7.3:-29688130 None:intergenic
TCATACACTAGCTCGTAGGA+GGG 0.656059 7.3:-29688126 None:intergenic
GAGATGGCTCACATTGCCAA+AGG 0.656074 7.3:+29688080 MS.gene42221:CDS
ATGATCCGGGTGAGCCACCA+GGG 0.658450 7.3:+29687934 MS.gene42221:CDS
ATCACGACGATGCGTCGCAG+CGG 0.660735 7.3:+29689416 MS.gene42221:CDS
GGTAACACCGCGAAACCCGA+CGG 0.660795 7.3:-29689367 None:intergenic
GATGGACATAGCGACGAGAG+TGG 0.665658 7.3:+29689391 MS.gene42221:CDS
TGTCAATAAGAGAAGCAATG+AGG 0.665809 7.3:+29683933 MS.gene42221:CDS
CCAATGTGTTCAAATTGTGG+AGG 0.666399 7.3:+29683959 MS.gene42221:CDS
TGATATGCAGGTGACATGGG+TGG 0.674096 7.3:+29687431 MS.gene42221:intron
TGTGTAGCAATAAGTGCGGG+AGG 0.674579 7.3:+29687768 MS.gene42221:intron
ACTTGTGAACAGTCTACCGA+CGG 0.682561 7.3:+29689477 MS.gene42221:CDS
CAAACAAATATAGAAGCACA+AGG 0.687269 7.3:+29683176 MS.gene42221:CDS
ATTGCCAAAGGACATGACCA+TGG 0.701545 7.3:+29688092 MS.gene42221:CDS
GCACTAAGCACAATCCCTGG+TGG 0.719254 7.3:-29687948 None:intergenic
AGCTTCTTGCAATCACACAA+GGG 0.721070 7.3:-29685010 None:intergenic
CTCCCCTCTAGAGAACACTC+AGG 0.723158 7.3:+29687594 MS.gene42221:CDS
AAACAAGCACAGACGCATCG+GGG 0.726013 7.3:+29689260 MS.gene42221:CDS
AGGATGTTAGGGTAATGACA+AGG 0.727638 7.3:+29687901 MS.gene42221:CDS
GCAATGCATGTAGTAATGAA+CGG 0.728861 7.3:+29689316 MS.gene42221:CDS
TGAAGCGGGTAGCCAAACTG+AGG 0.731803 7.3:-29687976 None:intergenic
ACAAATATAGAAGCACAAGG+TGG 0.748500 7.3:+29683179 MS.gene42221:CDS
AAAGTAGGAGTTGATAAACG+AGG 0.750797 7.3:-29683007 None:intergenic
ACCGACGGCAAAGCTCACGG+TGG 0.767524 7.3:+29689492 MS.gene42221:CDS
ATGCATGTAGTAATGAACGG+TGG 0.801335 7.3:+29689319 MS.gene42221:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAATTAATTACTTAAAA+GGG - chr7.3:29686499-29686518 None:intergenic 10.0%
!! ATAAATTTAGAAACAAAAAA+TGG + chr7.3:29683740-29683759 MS.gene42221:intron 10.0%
!! CATTATAAAATTAATAACAT+GGG - chr7.3:29686117-29686136 None:intergenic 10.0%
!! GTTTATAAAAAATAATTGTT+TGG + chr7.3:29683456-29683475 MS.gene42221:intron 10.0%
!! TCAAAATATGATAAAAAAAA+TGG - chr7.3:29688173-29688192 None:intergenic 10.0%
!!! AATTTTTTATATACATCTAT+TGG - chr7.3:29685515-29685534 None:intergenic 10.0%
!!! ACAATTTTTTTAGTAATATA+TGG - chr7.3:29688334-29688353 None:intergenic 10.0%
!!! CATGTTATTAATTTTATAAT+GGG + chr7.3:29686116-29686135 MS.gene42221:intron 10.0%
!!! TTTATTTATTTATTTCAAGT+TGG + chr7.3:29685904-29685923 MS.gene42221:intron 10.0%
!!! TTTATTTTTTTCATTTTACT+TGG + chr7.3:29684612-29684631 MS.gene42221:intron 10.0%
!! AAAAAAATAAAATTAGAGAC+CGG - chr7.3:29683772-29683791 None:intergenic 15.0%
!! AATGAAAAATAAAACCAAAA+TGG - chr7.3:29688500-29688519 None:intergenic 15.0%
!! CAACAAATTAATTACTTAAA+AGG - chr7.3:29686500-29686519 None:intergenic 15.0%
!! CATAGATTACAAAAATTATT+AGG - chr7.3:29685823-29685842 None:intergenic 15.0%
!! CCATTATAAAATTAATAACA+TGG - chr7.3:29686118-29686137 None:intergenic 15.0%
!! CTAAAACATTATAGTATTAA+TGG - chr7.3:29685138-29685157 None:intergenic 15.0%
!!! AAAAGAAATTTTTAATCATG+AGG + chr7.3:29684378-29684397 MS.gene42221:CDS 15.0%
!!! AACAACTTTTTTTTTTTTGA+AGG + chr7.3:29687251-29687270 MS.gene42221:intron 15.0%
!!! AATTTTTGTAATCTATGTAA+AGG + chr7.3:29685826-29685845 MS.gene42221:intron 15.0%
!!! CCATGTTATTAATTTTATAA+TGG + chr7.3:29686115-29686134 MS.gene42221:intron 15.0%
!!! TTGCAAATATAATTTTTTAG+TGG + chr7.3:29684898-29684917 MS.gene42221:intron 15.0%
!!! TTTAAAGTGATGAAAATAAA+AGG - chr7.3:29685164-29685183 None:intergenic 15.0%
!!! TTTAGAAGTTTTTTTTTTAG+AGG + chr7.3:29688566-29688585 MS.gene42221:intron 15.0%
!!! TTTATTACTTTTTGGAATTT+GGG - chr7.3:29685773-29685792 None:intergenic 15.0%
!!! TTTTCTAAACATCAAAATTT+AGG - chr7.3:29688887-29688906 None:intergenic 15.0%
!!! TTTTGTCTTTTATATTTTGT+AGG + chr7.3:29683480-29683499 MS.gene42221:intron 15.0%
!!! TTTTTTTTAATTCTTGTTGT+AGG + chr7.3:29689198-29689217 MS.gene42221:intron 15.0%
!! AAAAAAAATGGCATTTAAGA+TGG - chr7.3:29688161-29688180 None:intergenic 20.0%
!! AAACAAAAAATGGTAAAAAC+CGG + chr7.3:29683750-29683769 MS.gene42221:intron 20.0%
!! AATTTCCATCAAACAAATAA+TGG + chr7.3:29683227-29683246 MS.gene42221:CDS 20.0%
!! ACTCAAAAGTTTAGAAAAAT+AGG - chr7.3:29688845-29688864 None:intergenic 20.0%
!! ACTTAATTATGTCATTAATG+TGG - chr7.3:29688245-29688264 None:intergenic 20.0%
!! AGAGATGAAAAATACAAAAT+TGG - chr7.3:29685671-29685690 None:intergenic 20.0%
!! CAAATTCCAAAAAGTAATAA+AGG + chr7.3:29685772-29685791 MS.gene42221:intron 20.0%
!! CAAGTACATACATAAAATAA+TGG - chr7.3:29686834-29686853 None:intergenic 20.0%
!! CATGAGATAATTGTAAATAT+TGG - chr7.3:29684728-29684747 None:intergenic 20.0%
!! GAAAAAGAAAACAAAAAATG+TGG + chr7.3:29688902-29688921 MS.gene42221:intron 20.0%
!! GTAACAAATACTAATAGTAA+TGG + chr7.3:29684238-29684257 MS.gene42221:CDS 20.0%
!! TAAACCCTATAAAAACATAT+AGG + chr7.3:29686643-29686662 MS.gene42221:intron 20.0%
!! TATAAAAGAGTAATGTTAAC+CGG - chr7.3:29686299-29686318 None:intergenic 20.0%
!! TCTGTTATATACTATATTCA+AGG + chr7.3:29686666-29686685 MS.gene42221:intron 20.0%
!! TGAATCCATTAATTTAATCA+TGG + chr7.3:29686422-29686441 MS.gene42221:intron 20.0%
!! TGCCAAATTATAGTATATAT+GGG + chr7.3:29687065-29687084 MS.gene42221:intron 20.0%
!! TTGCCAAATTATAGTATATA+TGG + chr7.3:29687064-29687083 MS.gene42221:intron 20.0%
!!! AAAGATGAACTTTTTTATGA+AGG - chr7.3:29683428-29683447 None:intergenic 20.0%
!!! AAATTTAGGTTAAAAGAATG+AGG - chr7.3:29688873-29688892 None:intergenic 20.0%
!!! AACTTTCTATTTTATGTACA+CGG - chr7.3:29688542-29688561 None:intergenic 20.0%
!!! AACTTTTTTTTTCTTCTTCT+AGG - chr7.3:29683709-29683728 None:intergenic 20.0%
!!! AGTTTAGAAATTGGTTTTAA+TGG + chr7.3:29684121-29684140 MS.gene42221:CDS 20.0%
!!! ATTGAGCAATATTTTAAAGT+TGG + chr7.3:29685956-29685975 MS.gene42221:intron 20.0%
!!! CTTATATCATGAAATTTTGT+TGG + chr7.3:29689017-29689036 MS.gene42221:intron 20.0%
!!! CTTTATTACTTTTTGGAATT+TGG - chr7.3:29685774-29685793 None:intergenic 20.0%
!!! GCATCATGTATTTTATAAAA+GGG - chr7.3:29685488-29685507 None:intergenic 20.0%
!!! TACAATAAACTTTTCAAAGT+TGG + chr7.3:29687334-29687353 MS.gene42221:intron 20.0%
!!! TTGAGCAATATTTTAAAGTT+GGG + chr7.3:29685957-29685976 MS.gene42221:intron 20.0%
!!! TTTTATTTTTCATTGCACTA+AGG + chr7.3:29688506-29688525 MS.gene42221:intron 20.0%
!!! TTTTTATGTTCTTCTTGTTT+GGG + chr7.3:29683132-29683151 MS.gene42221:intron 20.0%
!!! TTTTTGATTTGATTGTTGTA+TGG + chr7.3:29688624-29688643 MS.gene42221:intron 20.0%
!!! TTTTTGTCTCTAAATATTTG+TGG - chr7.3:29688362-29688381 None:intergenic 20.0%
!!! TTTTTTATGTTCTTCTTGTT+TGG + chr7.3:29683131-29683150 MS.gene42221:intron 20.0%
! AAACAAATAATGGTTTGAGA+AGG + chr7.3:29683237-29683256 MS.gene42221:CDS 25.0%
! AAATAGAAGAACACAAATGA+AGG + chr7.3:29683598-29683617 MS.gene42221:CDS 25.0%
! AAGTTGGAATTTCATGAATA+TGG + chr7.3:29687350-29687369 MS.gene42221:intron 25.0%
! AATTACAAGAGGAACAAATA+TGG + chr7.3:29684216-29684235 MS.gene42221:CDS 25.0%
! AGACAATTTGTAACAGAAAT+AGG + chr7.3:29688760-29688779 MS.gene42221:intron 25.0%
! AGCCCATATATACTATAATT+TGG - chr7.3:29687070-29687089 None:intergenic 25.0%
! ATGTAAATCAACCACTTTAT+TGG - chr7.3:29687404-29687423 None:intergenic 25.0%
! ATTATTAGTACTCCTTGTAT+TGG + chr7.3:29684412-29684431 MS.gene42221:CDS 25.0%
! GAAATTTCACTAATAATTGC+TGG - chr7.3:29683986-29684005 None:intergenic 25.0%
! GACAATTTGTAACAGAAATA+GGG + chr7.3:29688761-29688780 MS.gene42221:intron 25.0%
! GACTTCCATGATTAAATTAA+TGG - chr7.3:29686430-29686449 None:intergenic 25.0%
! GTTAAATGTGTGTGTAAATA+TGG - chr7.3:29687706-29687725 None:intergenic 25.0%
! GTTATATACTATATTCAAGG+TGG + chr7.3:29686669-29686688 MS.gene42221:intron 25.0%
! TAATCGTATAACCAATAAAG+TGG + chr7.3:29687390-29687409 MS.gene42221:intron 25.0%
! TCAAACCATTATTTGTTTGA+TGG - chr7.3:29683235-29683254 None:intergenic 25.0%
! TGATTTCTTAATCAATGATC+CGG + chr7.3:29686268-29686287 MS.gene42221:intron 25.0%
! TTAATCATGAGGAATATACA+AGG + chr7.3:29684389-29684408 MS.gene42221:CDS 25.0%
! TTGAATGAAGTAGTTGAAAA+AGG - chr7.3:29684537-29684556 None:intergenic 25.0%
! TTGATTATATCAGACTCAAT+TGG + chr7.3:29683853-29683872 MS.gene42221:intron 25.0%
! TTGATTATGATCATGATTCA+TGG - chr7.3:29686950-29686969 None:intergenic 25.0%
!! CGCATCATGTATTTTATAAA+AGG - chr7.3:29685489-29685508 None:intergenic 25.0%
!! GGAATAGTATCTTTTTCTTT+TGG + chr7.3:29683661-29683680 MS.gene42221:intron 25.0%
!! TCATTTGTGTTCTTCTATTT+TGG - chr7.3:29683598-29683617 None:intergenic 25.0%
!! TGGAGTTCAATATTTTCATA+CGG + chr7.3:29683681-29683700 MS.gene42221:intron 25.0%
!!! ACAGACCTATATGTTTTTAT+AGG - chr7.3:29686651-29686670 None:intergenic 25.0%
!!! ACTTTTGGAAAGTGTTTTTT+TGG - chr7.3:29683627-29683646 None:intergenic 25.0%
!!! AGTTTCAGATTTTGACTTTT+TGG - chr7.3:29688811-29688830 None:intergenic 25.0%
!!! CAGACCTATATGTTTTTATA+GGG - chr7.3:29686650-29686669 None:intergenic 25.0%
!!! GTCTTTTTCGTTAAGTTTTA+GGG - chr7.3:29688960-29688979 None:intergenic 25.0%
!!! GTGAATCCTTTATTACTTTT+TGG - chr7.3:29685781-29685800 None:intergenic 25.0%
!!! GTTTAATTTGAACTATGTCA+TGG + chr7.3:29684747-29684766 MS.gene42221:intron 25.0%
!!! TAACATTGGTTTACATGTTA+GGG + chr7.3:29685629-29685648 MS.gene42221:intron 25.0%
!!! TAATGGTTTTGATAGATCAA+TGG + chr7.3:29684255-29684274 MS.gene42221:CDS 25.0%
!!! TGAGCAATATTTTAAAGTTG+GGG + chr7.3:29685958-29685977 MS.gene42221:intron 25.0%
!!! TGCTACTTTTATCTTTTGAA+TGG - chr7.3:29689554-29689573 None:intergenic 25.0%
!!! TGTATTGGTTTAAAACCAAA+TGG + chr7.3:29684427-29684446 MS.gene42221:CDS 25.0%
!!! TGTCTTTTTCGTTAAGTTTT+AGG - chr7.3:29688961-29688980 None:intergenic 25.0%
!!! TTTGATTTTCAGAGTTTTGT+TGG - chr7.3:29689154-29689173 None:intergenic 25.0%
!!! TTTGGTTTTAAACCAATACA+AGG - chr7.3:29684427-29684446 None:intergenic 25.0%
!!! TTTTTATAGGGTTTAAAACC+AGG - chr7.3:29686638-29686657 None:intergenic 25.0%
AAACAAAAAATGTGGTACCA+AGG + chr7.3:29688910-29688929 MS.gene42221:intron 30.0%
AAACAGTTGAGATAGTAGTA+CGG - chr7.3:29685866-29685885 None:intergenic 30.0%
AAAGACTTGAACTTAGCAAA+AGG + chr7.3:29683537-29683556 MS.gene42221:CDS 30.0%
AAATGGAACAAATTGAATGC+AGG + chr7.3:29687867-29687886 MS.gene42221:CDS 30.0%
AACATGGATTTAACCAAAGT+AGG - chr7.3:29683025-29683044 None:intergenic 30.0%
AATCCAATGTGTTCAAATTG+TGG + chr7.3:29683956-29683975 MS.gene42221:CDS 30.0%
AATGGAACAAATTGAATGCA+GGG + chr7.3:29687868-29687887 MS.gene42221:CDS 30.0%
AGCTACCAAAATTTAAGTGA+TGG - chr7.3:29686454-29686473 None:intergenic 30.0%
AGTCTATTATCTTGACTCAA+AGG - chr7.3:29686697-29686716 None:intergenic 30.0%
ATAGTAGTACGGTTTACTAT+AGG - chr7.3:29685855-29685874 None:intergenic 30.0%
ATGAAAAGGTGAAATTGAGA+AGG + chr7.3:29688705-29688724 MS.gene42221:intron 30.0%
ATTACCTTAGAGTAACCATT+TGG - chr7.3:29685435-29685454 None:intergenic 30.0%
CAAAAGTCTTTGTATTCACA+TGG + chr7.3:29683640-29683659 MS.gene42221:intron 30.0%
CAAACGTAACTACTAATTTC+AGG + chr7.3:29687139-29687158 MS.gene42221:intron 30.0%
CAAGTATGAACAGAAAATCT+TGG - chr7.3:29686916-29686935 None:intergenic 30.0%
CACAAAAGTTGTTTGTCATT+CGG - chr7.3:29687821-29687840 None:intergenic 30.0%
CGATGTGTTTCACAAAATTA+CGG - chr7.3:29687113-29687132 None:intergenic 30.0%
GATTTCTTAATCAATGATCC+GGG + chr7.3:29686269-29686288 MS.gene42221:intron 30.0%
GCTACGTGCAATATAAAATT+AGG - chr7.3:29686773-29686792 None:intergenic 30.0%
GGTTGAGATTTAGAAATGAA+TGG + chr7.3:29688587-29688606 MS.gene42221:intron 30.0%
GTCTATTATCTTGACTCAAA+GGG - chr7.3:29686696-29686715 None:intergenic 30.0%
GTGATATCTAGTGGAATAAA+TGG + chr7.3:29685044-29685063 MS.gene42221:CDS 30.0%
GTGTACAAGTAATTGAAACA+TGG + chr7.3:29685926-29685945 MS.gene42221:intron 30.0%
TAATTTGAACTATGTCATGG+AGG + chr7.3:29684750-29684769 MS.gene42221:intron 30.0%
TACATGAACATATGATATGC+AGG + chr7.3:29687419-29687438 MS.gene42221:intron 30.0%
TACTAGATAAAGTCATCATC+CGG - chr7.3:29686808-29686827 None:intergenic 30.0%
TGGAATTTCATGAATATGGT+AGG + chr7.3:29687354-29687373 MS.gene42221:intron 30.0%
TGGTGATATGAAGAGATTAA+TGG + chr7.3:29683199-29683218 MS.gene42221:CDS 30.0%
TGTTGTTATCATAAACAGCT+TGG + chr7.3:29684480-29684499 MS.gene42221:CDS 30.0%
TTTGTTCCTCTTGTAATTGA+AGG - chr7.3:29684214-29684233 None:intergenic 30.0%
! AAACAAGACAAGTCAAGTTT+TGG + chr7.3:29683570-29683589 MS.gene42221:CDS 30.0%
! AGGAAATCAAAGACTTTTTG+TGG - chr7.3:29688002-29688021 None:intergenic 30.0%
! AGTCTCCATCACTTAAATTT+TGG + chr7.3:29686446-29686465 MS.gene42221:intron 30.0%
! ATGATTCAATTACGCCATTT+TGG + chr7.3:29688483-29688502 MS.gene42221:intron 30.0%
! CAAACAAATATAGAAGCACA+AGG + chr7.3:29683176-29683195 MS.gene42221:CDS 30.0%
! CATGTGAATACAAAGACTTT+TGG - chr7.3:29683642-29683661 None:intergenic 30.0%
! GCAAAATTAGCTTCTAACAT+TGG + chr7.3:29685615-29685634 MS.gene42221:intron 30.0%
! TATGTTTCTTGAACTTGCTT+TGG + chr7.3:29684285-29684304 MS.gene42221:CDS 30.0%
!! CTAACATTGGTTTACATGTT+AGG + chr7.3:29685628-29685647 MS.gene42221:intron 30.0%
!! GCTACTTTGACTTGAATTAA+CGG - chr7.3:29689224-29689243 None:intergenic 30.0%
!! TCAAGTTCTTGAATTTGTTG+AGG - chr7.3:29683386-29683405 None:intergenic 30.0%
!! TTATAATGGGTCATGTTAAC+CGG + chr7.3:29686129-29686148 MS.gene42221:intron 30.0%
!!! AATATTTTAAAGTTGGGGAG+GGG + chr7.3:29685963-29685982 MS.gene42221:intron 30.0%
!!! ATTTGCTATATTTTGCAGTG+TGG - chr7.3:29686741-29686760 None:intergenic 30.0%
!!! CAAGTCTTTGTTTTTCATCA+GGG - chr7.3:29683526-29683545 None:intergenic 30.0%
!!! CAATATTTTAAAGTTGGGGA+GGG + chr7.3:29685962-29685981 MS.gene42221:intron 30.0%
!!! TATTGCCAGACACTTTTTTT+TGG + chr7.3:29688451-29688470 MS.gene42221:intron 30.0%
!!! TCAAGTCTTTGTTTTTCATC+AGG - chr7.3:29683527-29683546 None:intergenic 30.0%
!!! TGATAACGTTTTTTTCTTGG+TGG - chr7.3:29683353-29683372 None:intergenic 30.0%
!!! TTACTTTTTGGAATTTGGGA+AGG - chr7.3:29685769-29685788 None:intergenic 30.0%
!!! TTTTCGTTAAGTTTTAGGGT+TGG - chr7.3:29688956-29688975 None:intergenic 30.0%
!!! TTTTTTTCTTGGTGGATTGT+CGG - chr7.3:29683345-29683364 None:intergenic 30.0%
AAATCCATGTTCAACTCATC+TGG + chr7.3:29683034-29683053 MS.gene42221:CDS 35.0%
AAATTGAATGCAGGGAATGT+GGG + chr7.3:29687876-29687895 MS.gene42221:CDS 35.0%
AACACAAAGCTAAGGAATCA+TGG + chr7.3:29685989-29686008 MS.gene42221:intron 35.0%
AATGGATGAGTTAGTGAAGA+TGG + chr7.3:29684312-29684331 MS.gene42221:CDS 35.0%
ACAACTGAAGTGATATCTAG+TGG + chr7.3:29685035-29685054 MS.gene42221:CDS 35.0%
ACTAGATAAAGTCATCATCC+GGG - chr7.3:29686807-29686826 None:intergenic 35.0%
ACTAGATATCACTTCAGTTG+TGG - chr7.3:29685036-29685055 None:intergenic 35.0%
ACTTCAAGTACTTTCTCCAT+TGG + chr7.3:29685245-29685264 MS.gene42221:CDS 35.0%
AGATTGCTAGACATTCACAT+TGG - chr7.3:29687560-29687579 None:intergenic 35.0%
AGGACAGGGTTGAAAATATT+TGG + chr7.3:29688725-29688744 MS.gene42221:intron 35.0%
AGTGATGAACACATCAATGT+AGG + chr7.3:29686388-29686407 MS.gene42221:intron 35.0%
ATATGATATGCAGGTGACAT+GGG + chr7.3:29687428-29687447 MS.gene42221:intron 35.0%
ATATGGTAGGAAAATGAGCA+TGG + chr7.3:29687367-29687386 MS.gene42221:intron 35.0%
ATATTCATACACTAGCTCGT+AGG - chr7.3:29688133-29688152 None:intergenic 35.0%
ATCATTCACACATGTTGAAC+AGG - chr7.3:29686991-29687010 None:intergenic 35.0%
ATGAGCTTTCTAAGTTGCTT+GGG - chr7.3:29686027-29686046 None:intergenic 35.0%
ATGATGTTGCAGTTGTATAG+AGG + chr7.3:29687671-29687690 MS.gene42221:intron 35.0%
ATGCCAAAATCTTGACCTAA+AGG - chr7.3:29684175-29684194 None:intergenic 35.0%
CATCAATGTAGGTGAAATCT+AGG + chr7.3:29686399-29686418 MS.gene42221:intron 35.0%
CCAAACTCGAGTTTAGAAAT+TGG + chr7.3:29684112-29684131 MS.gene42221:CDS 35.0%
CCAATTTCTAAACTCGAGTT+TGG - chr7.3:29684115-29684134 None:intergenic 35.0%
CTAAGCCAAGAATGATTGAA+AGG - chr7.3:29684583-29684602 None:intergenic 35.0%
CTCCTACAGTTAAGAAAAGT+GGG - chr7.3:29685381-29685400 None:intergenic 35.0%
CTGTTCATACTTGTACATCA+TGG + chr7.3:29686923-29686942 MS.gene42221:intron 35.0%
CTGTTGTATAACAGAATCGA+TGG + chr7.3:29684976-29684995 MS.gene42221:intron 35.0%
CTTTCAATCATTCTTGGCTT+AGG + chr7.3:29684581-29684600 MS.gene42221:intron 35.0%
GATAACATGGATGGTATTTC+TGG + chr7.3:29683302-29683321 MS.gene42221:CDS 35.0%
GCAATGCATGTAGTAATGAA+CGG + chr7.3:29689316-29689335 MS.gene42221:CDS 35.0%
GGAATAAATGGAACCAGAAA+TGG + chr7.3:29685056-29685075 MS.gene42221:CDS 35.0%
GGCTCTTGTTGAAACTTTAA+TGG + chr7.3:29684501-29684520 MS.gene42221:CDS 35.0%
GTAGTCAATAAGTCAAACCT+TGG - chr7.3:29688930-29688949 None:intergenic 35.0%
TATGCCAAATGGTTACTCTA+AGG + chr7.3:29685428-29685447 MS.gene42221:CDS 35.0%
TCAACACTTCTAATCCAAAG+AGG - chr7.3:29684352-29684371 None:intergenic 35.0%
TCATGAAATTGTGTGTAACC+TGG + chr7.3:29686617-29686636 MS.gene42221:intron 35.0%
TCGTTTATCAACTCCTACTT+TGG + chr7.3:29683009-29683028 MS.gene42221:CDS 35.0%
TGTCAATAAGAGAAGCAATG+AGG + chr7.3:29683933-29683952 MS.gene42221:CDS 35.0%
TTCACAAAATTACGGTGACA+TGG - chr7.3:29687105-29687124 None:intergenic 35.0%
TTCATTACTACATGCATTGC+AGG - chr7.3:29689316-29689335 None:intergenic 35.0%
! AAAGACTTTTTGTGGTGAAG+CGG - chr7.3:29687994-29688013 None:intergenic 35.0%
! ACAAATATAGAAGCACAAGG+TGG + chr7.3:29683179-29683198 MS.gene42221:CDS 35.0%
! ATGACAAACAACTTTTGTGC+CGG + chr7.3:29687822-29687841 MS.gene42221:CDS 35.0%
! ATGCCTTTAGGTCAAGATTT+TGG + chr7.3:29684169-29684188 MS.gene42221:CDS 35.0%
! CTTAGCCTTTCAATCATTCT+TGG + chr7.3:29684575-29684594 MS.gene42221:intron 35.0%
! TAAACCAGATGAGTTGAACA+TGG - chr7.3:29683041-29683060 None:intergenic 35.0%
! TTTTGTGATAGACACAAGAG+AGG - chr7.3:29686360-29686379 None:intergenic 35.0%
!! AAAGTAGGAGTTGATAAACG+AGG - chr7.3:29683010-29683029 None:intergenic 35.0%
!! ACTTAGCAAAAGGCTTTGTT+TGG + chr7.3:29683547-29683566 MS.gene42221:CDS 35.0%
!! CACTACCAAAAAAAAGTGTC+TGG - chr7.3:29688459-29688478 None:intergenic 35.0%
!! GTTTTGATAGATCAATGGAG+AGG + chr7.3:29684260-29684279 MS.gene42221:CDS 35.0%
!! TGGATTAGAAGTGTTGAAAG+TGG + chr7.3:29684355-29684374 MS.gene42221:CDS 35.0%
!! TTGTTTTGTCGTGTAGTCAT+TGG + chr7.3:29688682-29688701 MS.gene42221:intron 35.0%
!! TTTAGGTCAAGATTTTGGCA+TGG + chr7.3:29684174-29684193 MS.gene42221:CDS 35.0%
!!! ACCAAATGGTTTTGTTTCTG+AGG + chr7.3:29684441-29684460 MS.gene42221:CDS 35.0%
!!! ATATTTTAAAGTTGGGGAGG+GGG + chr7.3:29685964-29685983 MS.gene42221:intron 35.0%
!!! CGGTGATAACGTTTTTTTCT+TGG - chr7.3:29683356-29683375 None:intergenic 35.0%
!!! GCAATATTTTAAAGTTGGGG+AGG + chr7.3:29685961-29685980 MS.gene42221:intron 35.0%
AAGGTGAAATTGAGAAGGAC+AGG + chr7.3:29688710-29688729 MS.gene42221:intron 40.0%
AAGTCGTATGTGTGTATGGA+TGG - chr7.3:29687627-29687646 None:intergenic 40.0%
ACATAGGAACATAACACCGT+GGG - chr7.3:29687751-29687770 None:intergenic 40.0%
ACATTCACATTGGCGTTGTA+GGG - chr7.3:29687550-29687569 None:intergenic 40.0%
ACGAGAAGCTTAGAAGTGAA+TGG + chr7.3:29688027-29688046 MS.gene42221:CDS 40.0%
AGAAAATCTTGGAGAAAGCC+TGG - chr7.3:29686905-29686924 None:intergenic 40.0%
AGCTTCTCTGATGGTATCTA+TGG - chr7.3:29685346-29685365 None:intergenic 40.0%
AGCTTCTTGCAATCACACAA+GGG - chr7.3:29685013-29685032 None:intergenic 40.0%
AGGATGTTAGGGTAATGACA+AGG + chr7.3:29687901-29687920 MS.gene42221:CDS 40.0%
AGGTGAAATTGAGAAGGACA+GGG + chr7.3:29688711-29688730 MS.gene42221:intron 40.0%
AGTCTCTCAAATATGCAACC+TGG + chr7.3:29686322-29686341 MS.gene42221:intron 40.0%
ATACCTGAGTGTTCTCTAGA+GGG - chr7.3:29687600-29687619 None:intergenic 40.0%
ATCCAAGTCGTATGTGTGTA+TGG - chr7.3:29687631-29687650 None:intergenic 40.0%
ATCCATACACACATACGACT+TGG + chr7.3:29687626-29687645 MS.gene42221:intron 40.0%
ATGCATGTAGTAATGAACGG+TGG + chr7.3:29689319-29689338 MS.gene42221:CDS 40.0%
CAAATTGAATGCAGGGAATG+TGG + chr7.3:29687875-29687894 MS.gene42221:CDS 40.0%
CAAGCAACTTAGAAAGCTCA+TGG + chr7.3:29686026-29686045 MS.gene42221:intron 40.0%
CACAAACTAATGAGCCTCTT+TGG + chr7.3:29684335-29684354 MS.gene42221:CDS 40.0%
CACATGTTGAACAGGAATGA+AGG - chr7.3:29686983-29687002 None:intergenic 40.0%
CATAATGCAGTTGTACGTTG+AGG - chr7.3:29687654-29687673 None:intergenic 40.0%
CATATGATATGCAGGTGACA+TGG + chr7.3:29687427-29687446 MS.gene42221:intron 40.0%
CATGAGCTTTCTAAGTTGCT+TGG - chr7.3:29686028-29686047 None:intergenic 40.0%
CATTTCTCCACAATAACCCA+CGG + chr7.3:29687732-29687751 MS.gene42221:intron 40.0%
CCAATGTGTTCAAATTGTGG+AGG + chr7.3:29683959-29683978 MS.gene42221:CDS 40.0%
CCTATGTGTAGCAATAAGTG+CGG + chr7.3:29687764-29687783 MS.gene42221:intron 40.0%
CCTCCACAATTTGAACACAT+TGG - chr7.3:29683962-29683981 None:intergenic 40.0%
CCTCCTACAGTTAAGAAAAG+TGG - chr7.3:29685382-29685401 None:intergenic 40.0%
CGAGAAGCTTAGAAGTGAAT+GGG + chr7.3:29688028-29688047 MS.gene42221:CDS 40.0%
CGTGTAGTCATTGGATGAAA+AGG + chr7.3:29688691-29688710 MS.gene42221:intron 40.0%
CTATGTGTAGCAATAAGTGC+GGG + chr7.3:29687765-29687784 MS.gene42221:intron 40.0%
GAAAGGCTAAGAAGAGAAGT+TGG - chr7.3:29684566-29684585 None:intergenic 40.0%
GAATGGGACATACTTTCCAA+TGG + chr7.3:29688044-29688063 MS.gene42221:CDS 40.0%
GCCTCAGAAACAAAACCATT+TGG - chr7.3:29684445-29684464 None:intergenic 40.0%
GGAGTAGTCATTAGTGTTAC+AGG - chr7.3:29684707-29684726 None:intergenic 40.0%
GTAGACTGTTCACAAGTATC+TGG - chr7.3:29689474-29689493 None:intergenic 40.0%
GTCACGAGAATTCACTACTT+AGG + chr7.3:29683879-29683898 MS.gene42221:CDS 40.0%
GTCTATAAAGCTGGTGAACT+TGG - chr7.3:29687479-29687498 None:intergenic 40.0%
GTCTCTCAAATATGCAACCT+GGG + chr7.3:29686323-29686342 MS.gene42221:intron 40.0%
GTGGTTCAAGATATGCCAAA+TGG + chr7.3:29685417-29685436 MS.gene42221:CDS 40.0%
GTTCCTCTTGTAATTGAAGG+TGG - chr7.3:29684211-29684230 None:intergenic 40.0%
TATACCTGAGTGTTCTCTAG+AGG - chr7.3:29687601-29687620 None:intergenic 40.0%
TATAGACCCTTGCTAAGCTT+TGG + chr7.3:29687492-29687511 MS.gene42221:CDS 40.0%
TCACCACCTTCAATTACAAG+AGG + chr7.3:29684205-29684224 MS.gene42221:CDS 40.0%
TCATGTTAACCGGTGTTCTT+CGG + chr7.3:29686139-29686158 MS.gene42221:intron 40.0%
TCTATTCCAATCTCTCATGC+AGG + chr7.3:29686566-29686585 MS.gene42221:intron 40.0%
TCTCCATAAGGTAGATACCT+TGG + chr7.3:29686859-29686878 MS.gene42221:intron 40.0%
TGCATTGCAGGAATATCTAC+AGG - chr7.3:29689304-29689323 None:intergenic 40.0%
TTAGCAAGGGTCTATAAAGC+TGG - chr7.3:29687488-29687507 None:intergenic 40.0%
TTGCCTTCAACAATGCCTTT+AGG + chr7.3:29684157-29684176 MS.gene42221:CDS 40.0%
! AAGACTTTTTGTGGTGAAGC+GGG - chr7.3:29687993-29688012 None:intergenic 40.0%
! AGACCAAGGTATCTACCTTA+TGG - chr7.3:29686865-29686884 None:intergenic 40.0%
! CAGATCTGGTAGTGATAACA+TGG + chr7.3:29683289-29683308 MS.gene42221:CDS 40.0%
! TCTGGTAGTGATAACATGGA+TGG + chr7.3:29683293-29683312 MS.gene42221:CDS 40.0%
! TGCTATATTTTGCAGTGTGG+TGG - chr7.3:29686738-29686757 None:intergenic 40.0%
! TTCGTGAGGTGAGTTTTCTA+AGG + chr7.3:29685274-29685293 MS.gene42221:CDS 40.0%
!! ACGTAGCTTCTCTAAAATCC+CGG + chr7.3:29686786-29686805 MS.gene42221:intron 40.0%
!! CACCCACTTTTCTTAACTGT+AGG + chr7.3:29685376-29685395 MS.gene42221:CDS 40.0%
!! CCACTTTTCTTAACTGTAGG+AGG + chr7.3:29685379-29685398 MS.gene42221:CDS 40.0%
!! GAATTTGTTGAGGAGTGTGT+CGG - chr7.3:29683376-29683395 None:intergenic 40.0%
!! GAGTTTGGTAACGACGTAAT+TGG - chr7.3:29684100-29684119 None:intergenic 40.0%
!! TGACCTAAAGGCATTGTTGA+AGG - chr7.3:29684163-29684182 None:intergenic 40.0%
!! TTGGTAACGACGTAATTGGA+CGG - chr7.3:29684096-29684115 None:intergenic 40.0%
!!! CTTTGTTTTTCATCAGGGTG+AGG - chr7.3:29683521-29683540 None:intergenic 40.0%
ACTTGTGAACAGTCTACCGA+CGG + chr7.3:29689477-29689496 MS.gene42221:CDS 45.0%
AGAAAACTCACCTCACGAAC+AGG - chr7.3:29685273-29685292 None:intergenic 45.0%
AGAAACAAGCACAGACGCAT+CGG + chr7.3:29689258-29689277 MS.gene42221:CDS 45.0%
AGGGGGAAAACACAAAGCTA+AGG + chr7.3:29685981-29686000 MS.gene42221:intron 45.0%
ATGTGAGCCATCTCTTGCAT+TGG - chr7.3:29688074-29688093 None:intergenic 45.0%
ATTGCCAAAGGACATGACCA+TGG + chr7.3:29688092-29688111 MS.gene42221:CDS 45.0%
CACATAGGAACATAACACCG+TGG - chr7.3:29687752-29687771 None:intergenic 45.0%
CAGAAATGGTGCTCTACAAC+TGG + chr7.3:29685070-29685089 MS.gene42221:CDS 45.0%
CCGCACTTATTGCTACACAT+AGG - chr7.3:29687767-29687786 None:intergenic 45.0%
GAACAACCTGCATGAGAGAT+TGG - chr7.3:29686575-29686594 None:intergenic 45.0%
GAACATGAAAGCTGCAGATC+TGG + chr7.3:29683275-29683294 MS.gene42221:CDS 45.0%
GACATTCACATTGGCGTTGT+AGG - chr7.3:29687551-29687570 None:intergenic 45.0%
GAGCTTCTTGCAATCACACA+AGG - chr7.3:29685014-29685033 None:intergenic 45.0%
GGCAAAATCACGAGTATTCG+TGG - chr7.3:29687049-29687068 None:intergenic 45.0%
GGTAATGACAAGGAAGAGTG+TGG + chr7.3:29687911-29687930 MS.gene42221:CDS 45.0%
GGTTGTGAGATTGCACTAGA+AGG - chr7.3:29682989-29683008 None:intergenic 45.0%
GTACTTGCTCGATCTCCATA+AGG + chr7.3:29686847-29686866 MS.gene42221:intron 45.0%
TAGAACCACTCTCTCAGTGA+TGG + chr7.3:29686089-29686108 MS.gene42221:intron 45.0%
TCAAATATGCAACCTGGGCT+AGG + chr7.3:29686328-29686347 MS.gene42221:intron 45.0%
TCATACACTAGCTCGTAGGA+GGG - chr7.3:29688129-29688148 None:intergenic 45.0%
TCTTGAACCACACAACCAGA+AGG - chr7.3:29685408-29685427 None:intergenic 45.0%
TGGGACATACTTTCCAATGG+TGG + chr7.3:29688047-29688066 MS.gene42221:CDS 45.0%
TTAGTGCTGCAACCTCAGTT+TGG + chr7.3:29687964-29687983 MS.gene42221:CDS 45.0%
TTATGTTGCGCTTCTTCCGT+CGG + chr7.3:29689351-29689370 MS.gene42221:CDS 45.0%
TTCATACACTAGCTCGTAGG+AGG - chr7.3:29688130-29688149 None:intergenic 45.0%
TTCTAAGCTTCTCGTTGCGA+AGG - chr7.3:29688022-29688041 None:intergenic 45.0%
TTTGCAAGCAGCATGCAGAA+GGG + chr7.3:29685298-29685317 MS.gene42221:CDS 45.0%
! AAGGAAGAGTGTGGATGATC+CGG + chr7.3:29687920-29687939 MS.gene42221:CDS 45.0%
! CAGTTGTAGAGCACCATTTC+TGG - chr7.3:29685072-29685091 None:intergenic 45.0%
! CATAACACCGTGGGTTATTG+TGG - chr7.3:29687742-29687761 None:intergenic 45.0%
! TACCTGAGTGTTCTCTAGAG+GGG - chr7.3:29687599-29687618 None:intergenic 45.0%
! TCTGAGGCTTCTAGAGAAAG+TGG + chr7.3:29684457-29684476 MS.gene42221:CDS 45.0%
! TGAACTTGCTTTGGCTGCAA+TGG + chr7.3:29684294-29684313 MS.gene42221:CDS 45.0%
! TGTTCTTCGGACACTGGTTA+AGG + chr7.3:29686152-29686171 MS.gene42221:intron 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG + chr7.3:29685297-29685316 MS.gene42221:CDS 45.0%
!! AGCGAGTGGATCACTTTTGA+CGG + chr7.3:29689441-29689460 MS.gene42221:CDS 45.0%
!! CTAAGCTTTGGCATGGGTTT+TGG + chr7.3:29687504-29687523 MS.gene42221:CDS 45.0%
!! AATTAAAATAATATTCTTAT+AGG - chr7.3:29686598-29686617 None:intergenic 5.0%
!! AATTAAATTCTAAATAAAAT+TGG - chr7.3:29688310-29688329 None:intergenic 5.0%
!! ATTAAAATAATATTCTTATA+GGG - chr7.3:29686597-29686616 None:intergenic 5.0%
!!! TAATTAAGTATTTTTAAAAA+TGG + chr7.3:29688256-29688275 MS.gene42221:intron 5.0%
AAACAAGCACAGACGCATCG+GGG + chr7.3:29689260-29689279 MS.gene42221:CDS 50.0%
AAAGCTCACGGTGGAATCAG+TGG + chr7.3:29689501-29689520 MS.gene42221:CDS 50.0%
AACCAGTGTCCGAAGAACAC+CGG - chr7.3:29686151-29686170 None:intergenic 50.0%
AACTGTAGGAGGCTTCCTTC+TGG + chr7.3:29685390-29685409 MS.gene42221:CDS 50.0%
ACACTTGCCGGCAAGTTTCT+AGG + chr7.3:29684070-29684089 MS.gene42221:CDS 50.0%
ACCAGCTGAAGCTTCTCTGA+TGG - chr7.3:29685355-29685374 None:intergenic 50.0%
ACCATCAGAGAAGCTTCAGC+TGG + chr7.3:29685351-29685370 MS.gene42221:CDS 50.0%
ACCCATGCCAAAGCTTAGCA+AGG - chr7.3:29687502-29687521 None:intergenic 50.0%
ACCTCACGAACAGGAACCAA+TGG - chr7.3:29685264-29685283 None:intergenic 50.0%
CACGGTGGAATCAGTGGAAA+CGG + chr7.3:29689507-29689526 MS.gene42221:CDS 50.0%
CCCATGCCAAAGCTTAGCAA+GGG - chr7.3:29687501-29687520 None:intergenic 50.0%
CTCTTGCATTGGACCACCAT+TGG - chr7.3:29688063-29688082 None:intergenic 50.0%
GAAACAAGCACAGACGCATC+GGG + chr7.3:29689259-29689278 MS.gene42221:CDS 50.0%
GAATGTGGGCGAGGATGTTA+GGG + chr7.3:29687890-29687909 MS.gene42221:CDS 50.0%
GACCGAGTTTGTACACTTGC+CGG + chr7.3:29684058-29684077 MS.gene42221:CDS 50.0%
GAGATGGCTCACATTGCCAA+AGG + chr7.3:29688080-29688099 MS.gene42221:CDS 50.0%
GTAATGTTAACCGGTGCTCC+CGG - chr7.3:29686290-29686309 None:intergenic 50.0%
GTTGCCATGGTCATGTCCTT+TGG - chr7.3:29688099-29688118 None:intergenic 50.0%
TATGTTGCGCTTCTTCCGTC+GGG + chr7.3:29689352-29689371 MS.gene42221:CDS 50.0%
TGATATGCAGGTGACATGGG+TGG + chr7.3:29687431-29687450 MS.gene42221:intron 50.0%
TGCCGGCAAGTGTACAAACT+CGG - chr7.3:29684063-29684082 None:intergenic 50.0%
TGGTGGTCCAATGCAAGAGA+TGG + chr7.3:29688064-29688083 MS.gene42221:CDS 50.0%
TGTCGTTGAGTCAACTTGCC+AGG + chr7.3:29686884-29686903 MS.gene42221:intron 50.0%
TGTGTAGCAATAAGTGCGGG+AGG + chr7.3:29687768-29687787 MS.gene42221:intron 50.0%
TTGCAAGCAGCATGCAGAAG+GGG + chr7.3:29685299-29685318 MS.gene42221:CDS 50.0%
! AATCAATGATCCGGGAGCAC+CGG + chr7.3:29686277-29686296 MS.gene42221:intron 50.0%
! ACCCTTGCTAAGCTTTGGCA+TGG + chr7.3:29687497-29687516 MS.gene42221:CDS 50.0%
! AGGAAGAGTGTGGATGATCC+GGG + chr7.3:29687921-29687940 MS.gene42221:CDS 50.0%
! CCCTTGCTAAGCTTTGGCAT+GGG + chr7.3:29687498-29687517 MS.gene42221:CDS 50.0%
! GTTGACTCAACGACAGACCA+AGG - chr7.3:29686879-29686898 None:intergenic 50.0%
!! TCCATTGGTTCCTGTTCGTG+AGG + chr7.3:29685260-29685279 MS.gene42221:CDS 50.0%
AACCGGTGTTCTTCGGACAC+TGG + chr7.3:29686146-29686165 MS.gene42221:intron 55.0%
AGCAGCATGCAGAAGGGGTA+TGG + chr7.3:29685304-29685323 MS.gene42221:CDS 55.0%
CACCGTCGATGCACAAACTC+CGG - chr7.3:29687844-29687863 None:intergenic 55.0%
CTCTCGTCGCTATGTCCATC+TGG - chr7.3:29689391-29689410 None:intergenic 55.0%
GATGGACATAGCGACGAGAG+TGG + chr7.3:29689391-29689410 MS.gene42221:CDS 55.0%
GCACTAAGCACAATCCCTGG+TGG - chr7.3:29687951-29687970 None:intergenic 55.0%
GCAGCACTAAGCACAATCCC+TGG - chr7.3:29687954-29687973 None:intergenic 55.0%
GGAATGTGGGCGAGGATGTT+AGG + chr7.3:29687889-29687908 MS.gene42221:CDS 55.0%
GGGAACCATCACTGAGAGAG+TGG - chr7.3:29686097-29686116 None:intergenic 55.0%
TCTACCGACGGCAAAGCTCA+CGG + chr7.3:29689489-29689508 MS.gene42221:CDS 55.0%
TGAAGCGGGTAGCCAAACTG+AGG - chr7.3:29687979-29687998 None:intergenic 55.0%
TGCCGGAGTTTGTGCATCGA+CGG + chr7.3:29687839-29687858 MS.gene42221:CDS 55.0%
TGGACGGCCTAGAAACTTGC+CGG - chr7.3:29684080-29684099 None:intergenic 55.0%
! CTCCCCTCTAGAGAACACTC+AGG + chr7.3:29687594-29687613 MS.gene42221:CDS 55.0%
! GAGGCTTCCTTCTGGTTGTG+TGG + chr7.3:29685398-29685417 MS.gene42221:CDS 55.0%
! GCAGCATGCAGAAGGGGTAT+GGG + chr7.3:29685305-29685324 MS.gene42221:CDS 55.0%
! GTGCATCGACGGTGCACAAA+TGG + chr7.3:29687850-29687869 MS.gene42221:CDS 55.0%
!! GGGTTTTGGCGCACAACGTT+GGG + chr7.3:29687518-29687537 MS.gene42221:CDS 55.0%
!! GGTTTCGCGGTGTTACCAGA+TGG + chr7.3:29689373-29689392 MS.gene42221:CDS 55.0%
!! TGGGTTTTGGCGCACAACGT+TGG + chr7.3:29687517-29687536 MS.gene42221:CDS 55.0%
ACAATCCCTGGTGGCTCACC+CGG - chr7.3:29687942-29687961 None:intergenic 60.0%
ATCACGACGATGCGTCGCAG+CGG + chr7.3:29689416-29689435 MS.gene42221:CDS 60.0%
ATGATCCGGGTGAGCCACCA+GGG + chr7.3:29687934-29687953 MS.gene42221:CDS 60.0%
GAATGCAGGGAATGTGGGCG+AGG + chr7.3:29687881-29687900 MS.gene42221:CDS 60.0%
GCTTCTTCCGTCGGGTTTCG+CGG + chr7.3:29689360-29689379 MS.gene42221:CDS 60.0%
GGAGGGAGACACAGTTGCCA+TGG - chr7.3:29688112-29688131 None:intergenic 60.0%
GGTAACACCGCGAAACCCGA+CGG - chr7.3:29689370-29689389 None:intergenic 60.0%
TCCACCGTGAGCTTTGCCGT+CGG - chr7.3:29689496-29689515 None:intergenic 60.0%
! TGCAGAAGGGGTATGGGCAG+TGG + chr7.3:29685311-29685330 MS.gene42221:CDS 60.0%
!! GAGAGGAAGCATCCTAGCCC+AGG - chr7.3:29686343-29686362 None:intergenic 60.0%
ACCGACGGCAAAGCTCACGG+TGG + chr7.3:29689492-29689511 MS.gene42221:CDS 65.0%
GATGATCCGGGTGAGCCACC+AGG + chr7.3:29687933-29687952 MS.gene42221:CDS 65.0%
GCGTCGCAGCGGAGAGCGAG+TGG + chr7.3:29689427-29689446 MS.gene42221:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 29682983 29689591 29682983 ID=MS.gene42221
chr7.3 mRNA 29682983 29689591 29682983 ID=MS.gene42221.t1;Parent=MS.gene42221
chr7.3 exon 29682983 29683072 29682983 ID=MS.gene42221.t1.exon1;Parent=MS.gene42221.t1
chr7.3 CDS 29682983 29683072 29682983 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29683176 29683408 29683176 ID=MS.gene42221.t1.exon2;Parent=MS.gene42221.t1
chr7.3 CDS 29683176 29683408 29683176 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29683502 29683619 29683502 ID=MS.gene42221.t1.exon3;Parent=MS.gene42221.t1
chr7.3 CDS 29683502 29683619 29683502 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29683866 29684528 29683866 ID=MS.gene42221.t1.exon4;Parent=MS.gene42221.t1
chr7.3 CDS 29683866 29684528 29683866 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29684990 29685091 29684990 ID=MS.gene42221.t1.exon5;Parent=MS.gene42221.t1
chr7.3 CDS 29684990 29685091 29684990 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29685234 29685449 29685234 ID=MS.gene42221.t1.exon6;Parent=MS.gene42221.t1
chr7.3 CDS 29685234 29685449 29685234 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29687441 29687615 29687441 ID=MS.gene42221.t1.exon7;Parent=MS.gene42221.t1
chr7.3 CDS 29687441 29687615 29687441 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29687775 29688142 29687775 ID=MS.gene42221.t1.exon8;Parent=MS.gene42221.t1
chr7.3 CDS 29687775 29688142 29687775 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
chr7.3 exon 29689220 29689591 29689220 ID=MS.gene42221.t1.exon9;Parent=MS.gene42221.t1
chr7.3 CDS 29689220 29689591 29689220 ID=cds.MS.gene42221.t1;Parent=MS.gene42221.t1
Gene Sequence

>MS.gene42221

ATGCCTTCTAGTGCAATCTCACAACCTCGTTTATCAACTCCTACTTTGGTTAAATCCATGTTCAACTCATCTGGTTTATCTTTAGCACTTGTAAGAGATTATTTTCTTTTCATACTATAATATGATTTTATATTTTTACTTCAAACAATTTTTTATGTTCTTCTTGTTTGGGAAATATTGAATATTATTACAGCAAACAAATATAGAAGCACAAGGTGGTGATATGAAGAGATTAATGGCAGAAAATTTCCATCAAACAAATAATGGTTTGAGAAGGAATAGAGAAGAAGAAGAACATGAAAGCTGCAGATCTGGTAGTGATAACATGGATGGTATTTCTGGTGATGATTTTGATGCTGCCGACAATCCACCAAGAAAAAAACGTTATCACCGACACACTCCTCAACAAATTCAAGAACTTGAATCGTATGTATCATAATTTCCTTCATAAAAAAGTTCATCTTTTTTATGAAGTTTATAAAAAATAATTGTTTGGTTTTTGTCTTTTATATTTTGTAGGATGTTTAAAGAGTGTCCTCACCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGGTAACCAAAAAAACACTTTCCAAAAGTCTTTGTATTCACATGGAATAGTATCTTTTTCTTTTGGAGTTCAATATTTTCATACGGCTCCTAGAAGAAGAAAAAAAAAGTTGAAATAGCAACATAAATTTAGAAACAAAAAATGGTAAAAACCGGTCTCTAATTTTATTTTTTTCGTCTCTAATTTTTGTCGTTATTTCAACTTTTTCTAATTTTGTCGCTAATTTTATTTTTTGTTGATTATATCAGACTCAATTGGAACGTCACGAGAATTCACTACTTAGGCAAGCAAATGATAAATTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCAATGTGTTCAAATTGTGGAGGACCAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGATTAAAAGATGAATTAGACCGAGTTTGTACACTTGCCGGCAAGTTTCTAGGCCGTCCAATTACGTCGTTACCAAACTCGAGTTTAGAAATTGGTTTTAATGGTTTGAACAATACTTTGCCTTCAACAATGCCTTTAGGTCAAGATTTTGGCATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAGTGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTAAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAGTAAGCCTTTTTCAACTACTTCATTCAATTTTCTCCAACTTCTCTTCTTAGCCTTTCAATCATTCTTGGCTTAGGATGATTTATTTATTTTTTTCATTTTACTTGGATGAATATATTTAGTACTATACTAGAATTCATTAAGAAAAAATTGAAGAAATGAAAATTATTATTAATACCTGTAACACTAATGACTACTCCAATATTTACAATTATCTCATGTTTAATTTGAACTATGTCATGGAGGTTAGTAATCAAGCTATTTTTTACTACTAGTTTACTACTACAAAATATTTTAGAAACTAGAAAGCAATTTGTATGATGATAAAATTATCATAGACAAATTTTATATTTTGTCTTAATAAATTTATGTTGCAAATATAATTTTTTAGTGGTGATTTATTAATAATAATATATATTAAATTGTTGTACTTGAAACTGATTTTGTTTCTGTTGTATAACAGAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGGTATATAAATTATAAATTATATAGTACATAAACAGAAATTTTTCCATTAATACTATAATGTTTTAGTTACCTTTTATTTTCATCACTTTAAAAATACTTCTATATATTTTTGTTTTAGCTTATGAAATTTATTTGTTTACAGATGCAAGCTGAACTTCAAGTACTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAGCTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTAATTAAAAAAAAAAAAAAAACTCGTTAGCAAAACCCTTTTATAAAATACATGATGCGATGCCAATAGATGTATATAAAAAATTTACATTATTAGTTTATACAAATTAAAATTGAAATAGCGACGAAAATTTAAATAATGACGTAAAGTTAGTAACACAAAAATGCAAAATTAGCTTCTAACATTGGTTTACATGTTAGGGACATAATTTTTAGAAACCAATTTTGTATTTTTCATCTCTAATTTATGTTGTTTTTTCAATTTTTTCTAGTAGTGTGAATCATTTTATTTTATATTTCAATTTACTGCATTTTTACCTTCCCAAATTCCAAAAAGTAATAAAGGATTCACAATCTGTCAAAAGTTGTATCCTAATAATTTTTGTAATCTATGTAAAGGACACCTATAGTAAACCGTACTACTATCTCAACTGTTTTTTTTTTCATCACATTTATTTATTTATTTATTTCAAGTTGGTGTACAAGTAATTGAAACATGGTAGCTGAATTGAGCAATATTTTAAAGTTGGGGAGGGGGAAAACACAAAGCTAAGGAATCATGGAGCTTTTGCTTTCCCAAGCAACTTAGAAAGCTCATGGTTCAAAGTAATATTTCAGCTTGTTTAGTGAGTATTCACTATAGAACCACTCTCTCAGTGATGGTTCCCATGTTATTAATTTTATAATGGGTCATGTTAACCGGTGTTCTTCGGACACTGGTTAAGGAAACTAAGAAAATGAAGTTTTAAAATGAAAATAACACTTTTTATGTTTTATAAGAGTTAAAAACAAAAGTTTCAATGTAATACTTAATACATTTGATTTCTTAATCAATGATCCGGGAGCACCGGTTAACATTACTCTTTTATAATTAGTCTCTCAAATATGCAACCTGGGCTAGGATGCTTCCTCTCTTGTGTCTATCACAAAAATTATTTGAGTGATGAACACATCAATGTAGGTGAAATCTAGGTGAATCCATTAATTTAATCATGGAAGTCTCCATCACTTAAATTTTGGTAGCTGCATGAACACATTAATTACAATCCCTTTTAAGTAATTAATTTGTTGTTTTTTTAACTTTATCACATTCTATTAAAAAAAATCATATGATGTTTCTATTCCAATCTCTCATGCAGGTTGTTCCCTATAAGAATATTATTTTAATTCATGAAATTGTGTGTAACCTGGTTTTAAACCCTATAAAAACATATAGGTCTGTTATATACTATATTCAAGGTGGACCCTTTGAGTCAAGATAATAGACTGAATATTTTGTCTTTTTGCCACCACACTGCAAAATATAGCAAATCTCGATGAACCTAATTTTATATTGCACGTAGCTTCTCTAAAATCCCGGATGATGACTTTATCTAGTAGTACCATTATTTTATGTATGTACTTGCTCGATCTCCATAAGGTAGATACCTTGGTCTGTCGTTGAGTCAACTTGCCAGGCTTTCTCCAAGATTTTCTGTTCATACTTGTACATCATGGTCCATGAATCATGATCATAATCAATCAGCAGCTTCCTTCATTCCTGTTCAACATGTGTGAATGATGACAGCTTAAATACATAGTGAGAACGATAAAATTACCACGAATACTCGTGATTTTGCCAAATTATAGTATATATGGGCTTTAATAAAATGACCATGTCACCGTAATTTTGTGAAACACATCGTGATTTCAAACGTAACTACTAATTTCAGGAAAATTTAGTAACTCGACTATTATTAAAGCTTAATCATTAGTTCTAATTGTGATTCAACAATAATTACTTACATTTAGATCTAATAGCTAACAACTTTTTTTTTTTTGAAGGAAAGCTAACAACTATGTTGTGGTGCAGCTGTTGTAGATAATTTTTTTTTTTTTTTATGTTTACAATAAACTTTTCAAAGTTGGAATTTCATGAATATGGTAGGAAAATGAGCATGGTAATCGTATAACCAATAAAGTGGTTGATTTACATGAACATATGATATGCAGGTGACATGGGTGGAGCATGCAGAATATGAAGAAAGCCAAGTTCACCAGCTTTATAGACCCTTGCTAAGCTTTGGCATGGGTTTTGGCGCACAACGTTGGGTTGCAACCCTACAACGCCAATGTGAATGTCTAGCAATCTTAATGTCAGCATCACTCCCCTCTAGAGAACACTCAGGTATATATCCATCCATACACACATACGACTTGGATCCTCAACGTACAACTGCATTATGATGTTGCAGTTGTATAGAGGATTCAAACACCATATTTACACACACATTTAACAAAATGCATTTCTCCACAATAACCCACGGTGTTATGTTCCTATGTGTAGCAATAAGTGCGGGAGGAAGACGTAGCATGCTAAAATTAGCGCACCGAATGACAAACAACTTTTGTGCCGGAGTTTGTGCATCGACGGTGCACAAATGGAACAAATTGAATGCAGGGAATGTGGGCGAGGATGTTAGGGTAATGACAAGGAAGAGTGTGGATGATCCGGGTGAGCCACCAGGGATTGTGCTTAGTGCTGCAACCTCAGTTTGGCTACCCGCTTCACCACAAAAAGTCTTTGATTTCCTTCGCAACGAGAAGCTTAGAAGTGAATGGGACATACTTTCCAATGGTGGTCCAATGCAAGAGATGGCTCACATTGCCAAAGGACATGACCATGGCAACTGTGTCTCCCTCCTACGAGCTAGTGTATGAATATCTCTTCCATCTTAAATGCCATTTTTTTTATCATATTTTGAGTTTAAAATTAGATTTTAGAATTCGTTTAGTGTTTTTTGTCTTTATTTTCCACATTAATGACATAATTAAGTATTTTTAAAAATGGTAGACATGATTAGACGATTAAAAAAAGACCAATTTTATTTAGAATTTAATTACCATATATTACTAAAAAAATTGTATTAACCACAAATATTTAGAGACAAAAAACTTAAAAGTTGTATAAATATAATTTTTCATATCTATAAATTTTATGTAAATATTTTATAAAATCATATTATTGCCAGACACTTTTTTTTGGTAGTGAAATATGATTCAATTACGCCATTTTGGTTTTATTTTTCATTGCACTAAGGTTATTTGTATCCGTGTACATAAAATAGAAAGTTGTAATTTAGAAGTTTTTTTTTTAGAGGTTGAGATTTAGAAATGAATGGTGTACGTTTTACTATTTTTGATTTGATTGTTGTATGGCGATAACGTTTTCAAGAGAAGAAGAAACGTGAATCTTGTTTTGTCGTGTAGTCATTGGATGAAAAGGTGAAATTGAGAAGGACAGGGTTGAAAATATTTGGAAGCATCTATCAAGACAATTTGTAACAGAAATAGGGCAGCGTTTGTTTCAGCAAATTTTTCCAAAAAGTCAAAATCTGAAACTTTTGTCAACTTCCTATTTTTCTAAACTTTTGAGTTCTGACCTCATTCTTTTAACCTAAATTTTGATGTTTAGAAAAAGAAAACAAAAAATGTGGTACCAAGGTTTGACTTATTGACTACTATCCAACCCTAAAACTTAACGAAAAAGACAACACATAAAATATAAATATTAATTTCAAAAAGCATTCTTATATCATGAAATTTTGTTGGATATTTATTTTATCATTCAATAAATTATTTAATGTCATATTATCATCTAATATTTAATTCTTTCAAATTAAATTTAAATTTTGAATTAATTTTAGTTATAAGTATATGTATCCAACAAAACTCTGAAAATCAAATAATTTTTCATTTTTTTAACGTTGTTTTTTTTAATTCTTGTTGTAGGCCGTTAATTCAAGTCAAAGTAGCATGTTAATTCTACAAGAAACAAGCACAGACGCATCGGGGTCGCTTGTTGTGTACGCTCCTGTAGATATTCCTGCAATGCATGTAGTAATGAACGGTGGCGATTCAGCTTATGTTGCGCTTCTTCCGTCGGGTTTCGCGGTGTTACCAGATGGACATAGCGACGAGAGTGGTAATCACGACGATGCGTCGCAGCGGAGAGCGAGTGGATCACTTTTGACGGTAGCATTCCAGATACTTGTGAACAGTCTACCGACGGCAAAGCTCACGGTGGAATCAGTGGAAACGGTGAACAATCTCATTTCATGTACCATTCAAAAGATAAAAGTAGCACTTCAATGTGAGAGTTAA
Protein sequence

>MS.gene42221.t1

MPSSAISQPRLSTPTLVKSMFNSSGLSLALQTNIEAQGGDMKRLMAENFHQTNNGLRRNREEEEHESCRSGSDNMDGISGDDFDAADNPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGPAIISEISLEEQHLRIENARLKDELDRVCTLAGKFLGRPITSLPNSSLEIGFNGLNNTLPSTMPLGQDFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIREASAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSFGMGFGAQRWVATLQRQCECLAILMSASLPSREHSAISAGGRRSMLKLAHRMTNNFCAGVCASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPASPQKVFDFLRNEKLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAVNSSQSSMLILQETSTDASGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAVLPDGHSDESGNHDDASQRRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTIQKIKVALQCES