AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42232

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42232.t1 MTR_7g076170 95.931 639 25 1 1 639 1 638 0.0 1291
MS.gene42232.t1 MTR_8g432680 75.039 633 155 3 4 634 7 638 0.0 1011
MS.gene42232.t1 MTR_0019s0120 63.766 632 213 6 7 634 15 634 0.0 855
MS.gene42232.t1 MTR_1g101370 62.875 633 214 8 1 627 1 618 0.0 831
MS.gene42232.t1 MTR_8g100075 58.786 626 234 6 18 635 20 629 0.0 773
MS.gene42232.t1 MTR_4g098890 57.305 616 233 8 12 623 11 600 0.0 736
MS.gene42232.t1 MTR_8g055840 55.172 609 247 6 23 628 17 602 0.0 715
MS.gene42232.t1 MTR_0019s0120 62.782 532 182 6 7 534 15 534 0.0 701
MS.gene42232.t1 MTR_5g040360 53.485 617 255 7 18 628 11 601 0.0 688
MS.gene42232.t1 MTR_3g040370 51.768 622 265 7 10 628 10 599 0.0 662
MS.gene42232.t1 MTR_7g006060 52.075 530 248 3 96 620 37 565 0.0 614
MS.gene42232.t1 MTR_8g071280 50.566 530 248 10 103 628 71 590 1.01e-180 525
MS.gene42232.t1 MTR_5g026930 44.866 633 297 17 12 637 11 598 1.77e-171 502
MS.gene42232.t1 MTR_8g432620 44.465 542 271 10 94 627 82 601 1.87e-167 491
MS.gene42232.t1 MTR_7g076150 46.981 530 253 9 105 626 78 587 7.33e-167 489
MS.gene42232.t1 MTR_1g069785 41.840 576 297 12 70 630 37 589 1.22e-155 461
MS.gene42232.t1 MTR_5g080720 40.673 654 300 21 25 623 17 637 9.23e-154 458
MS.gene42232.t1 MTR_3g068990 44.633 531 265 13 104 624 155 666 9.60e-152 454
MS.gene42232.t1 MTR_1g442840 45.117 512 253 10 103 602 93 588 1.94e-149 446
MS.gene42232.t1 MTR_1g075900 43.542 542 273 12 103 628 92 616 1.73e-146 439
MS.gene42232.t1 MTR_1g442840 45.194 489 244 9 122 602 3 475 4.56e-146 434
MS.gene42232.t1 MTR_7g076150 46.767 464 219 9 171 626 1 444 4.34e-142 421
MS.gene42232.t1 MTR_5g026930 45.094 530 243 15 12 534 11 499 1.22e-140 419
MS.gene42232.t1 MTR_1g029730 42.669 532 274 14 106 625 146 658 3.98e-140 423
MS.gene42232.t1 MTR_5g080720 40.067 594 268 21 25 563 17 577 2.88e-132 400
MS.gene42232.t1 MTR_3g096480 40.067 599 310 21 57 632 210 782 3.74e-132 407
MS.gene42232.t1 MTR_1g051055 36.731 618 337 13 27 627 24 604 3.11e-130 396
MS.gene42232.t1 MTR_5g083150 39.439 535 268 18 111 626 101 598 1.65e-129 394
MS.gene42232.t1 MTR_8g093880 39.856 557 293 18 70 605 254 789 6.08e-128 397
MS.gene42232.t1 MTR_3g071530 39.850 532 275 15 111 631 153 650 1.75e-126 388
MS.gene42232.t1 MTR_3g088790 40.374 535 277 18 110 626 232 742 3.77e-125 388
MS.gene42232.t1 MTR_5g021100 38.858 543 282 19 104 626 321 833 1.19e-121 381
MS.gene42232.t1 MTR_8g076650 39.483 542 279 16 104 626 379 890 1.72e-121 382
MS.gene42232.t1 MTR_1g022255 34.659 528 294 16 112 626 210 699 4.41e-92 300
MS.gene42232.t1 MTR_3g074780 31.008 645 361 20 20 626 90 688 8.71e-91 296
MS.gene42232.t1 MTR_4g083030 31.193 654 366 22 1 625 5 603 3.64e-90 292
MS.gene42232.t1 MTR_5g064080 29.734 639 367 22 20 626 82 670 8.31e-88 288
MS.gene42232.t1 MTR_1g022255 30.886 395 228 13 112 494 210 571 1.69e-48 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42232.t1 AT2G45750 68.539 623 181 3 18 636 14 625 0.0 920
MS.gene42232.t1 AT4G00750 68.189 635 183 6 4 634 11 630 0.0 920
MS.gene42232.t1 AT4G10440 60.333 600 229 4 29 628 28 618 0.0 775
MS.gene42232.t1 AT1G33170 58.121 628 239 6 19 629 17 637 0.0 775
MS.gene42232.t1 AT1G26850 56.792 611 241 6 22 628 19 610 0.0 726
MS.gene42232.t1 AT1G26850 56.792 611 241 6 22 628 19 610 0.0 726
MS.gene42232.t1 AT4G18030 56.078 617 247 7 14 628 11 605 0.0 704
MS.gene42232.t1 AT2G43200 52.500 520 241 4 103 621 92 606 0.0 584
MS.gene42232.t1 AT2G43200 52.500 520 241 4 103 621 92 606 0.0 584
MS.gene42232.t1 AT1G26850 54.365 504 207 6 22 521 19 503 0.0 563
MS.gene42232.t1 AT1G31850 45.920 625 299 13 10 628 7 598 0.0 539
MS.gene42232.t1 AT1G31850 45.920 625 299 13 10 628 7 598 0.0 539
MS.gene42232.t1 AT1G31850 45.920 625 299 13 10 628 7 598 0.0 539
MS.gene42232.t1 AT1G31850 45.920 625 299 13 10 628 7 598 0.0 539
MS.gene42232.t1 AT4G19120 48.295 528 261 9 105 628 73 592 2.45e-177 517
MS.gene42232.t1 AT4G19120 48.295 528 261 9 105 628 73 592 2.45e-177 517
MS.gene42232.t1 AT4G00740 46.435 547 259 13 94 629 73 596 2.85e-168 494
MS.gene42232.t1 AT4G00740 46.435 547 259 13 94 629 73 596 2.85e-168 494
MS.gene42232.t1 AT1G04430 41.319 576 301 11 82 636 64 623 2.06e-151 451
MS.gene42232.t1 AT1G04430 41.319 576 301 11 82 636 64 623 2.06e-151 451
MS.gene42232.t1 AT1G04430 41.319 576 301 11 82 636 64 623 2.06e-151 451
MS.gene42232.t1 AT2G39750 42.620 542 280 13 94 624 169 690 3.24e-149 448
MS.gene42232.t1 AT4G19120 49.539 434 208 8 105 534 73 499 4.85e-147 436
MS.gene42232.t1 AT4G14360 44.727 512 255 10 103 602 77 572 6.36e-147 439
MS.gene42232.t1 AT4G14360 44.727 512 255 10 103 602 77 572 6.36e-147 439
MS.gene42232.t1 AT3G23300 42.620 542 281 11 103 630 80 605 9.01e-146 436
MS.gene42232.t1 AT3G23300 42.620 542 281 11 103 630 80 605 9.01e-146 436
MS.gene42232.t1 AT5G06050 41.667 552 287 15 91 628 136 666 1.78e-145 438
MS.gene42232.t1 AT5G14430 41.467 627 310 19 25 629 16 607 6.94e-144 432
MS.gene42232.t1 AT1G77260 42.726 543 278 14 93 624 134 654 3.38e-143 431
MS.gene42232.t1 AT5G14430 41.148 627 312 19 25 629 16 607 9.89e-142 426
MS.gene42232.t1 AT5G04060 40.146 548 287 12 93 627 79 598 6.47e-133 403
MS.gene42232.t1 AT3G10200 40.556 540 281 14 104 627 74 589 1.63e-131 399
MS.gene42232.t1 AT2G40280 41.155 537 262 17 111 632 90 587 1.56e-130 396
MS.gene42232.t1 AT1G29470 37.439 617 334 19 43 635 178 766 4.26e-129 399
MS.gene42232.t1 AT1G29470 37.439 617 334 19 43 635 178 766 4.26e-129 399
MS.gene42232.t1 AT3G56080 41.210 529 264 16 111 626 114 608 6.74e-129 393
MS.gene42232.t1 AT2G34300 40.472 551 286 16 104 638 242 766 4.41e-128 396
MS.gene42232.t1 AT2G34300 40.472 551 286 16 104 638 242 766 4.41e-128 396
MS.gene42232.t1 AT2G34300 40.472 551 286 16 104 638 242 766 4.41e-128 396
MS.gene42232.t1 AT5G64030 39.479 537 276 16 111 626 308 816 1.73e-125 391
MS.gene42232.t1 AT3G51070 40.183 545 278 19 110 635 380 895 1.57e-124 390
MS.gene42232.t1 AT3G10200 40.110 546 275 15 104 621 74 595 2.87e-123 378
MS.gene42232.t1 AT3G56080 42.765 463 226 15 111 560 114 550 6.57e-115 355
MS.gene42232.t1 AT3G51070 41.239 468 238 16 110 560 380 827 3.17e-107 343
MS.gene42232.t1 AT1G19430 35.417 528 291 16 112 626 232 722 3.58e-94 306
MS.gene42232.t1 AT1G19430 35.417 528 291 16 112 626 232 722 3.58e-94 306
MS.gene42232.t1 AT1G13860 33.333 549 302 15 98 615 77 592 1.02e-90 293
MS.gene42232.t1 AT1G13860 33.333 549 302 15 98 615 77 592 1.02e-90 293
MS.gene42232.t1 AT1G13860 33.333 549 302 15 98 615 77 592 1.02e-90 293
MS.gene42232.t1 AT1G13860 33.333 549 302 15 98 615 77 592 1.02e-90 293
MS.gene42232.t1 AT1G78240 33.514 555 310 17 105 625 149 678 3.90e-89 291
MS.gene42232.t1 AT1G78240 33.514 555 310 17 105 625 149 678 3.90e-89 291
MS.gene42232.t1 AT2G03480 32.616 558 303 15 96 625 80 592 1.32e-87 285
MS.gene42232.t1 AT2G03480 32.258 558 316 16 96 625 80 603 4.79e-84 276
MS.gene42232.t1 AT1G13860 34.430 456 249 13 188 615 3 436 3.11e-79 258
MS.gene42232.t1 AT1G19430 33.333 396 220 13 112 495 232 595 8.90e-54 194
MS.gene42232.t1 AT2G03480 30.581 327 208 6 96 412 80 397 4.00e-46 169

Find 192 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCAAAATGAACCCAATTT+TGG 0.133779 7.3:-29599373 None:intergenic
TATCAGGGCCACCAATAAAT+TGG 0.228314 7.3:+29601272 MS.gene42232:CDS
CAATGGCTCTCCCAATTTAT+TGG 0.228514 7.3:-29601283 None:intergenic
TTCGGACGGACCCATCTTTA+AGG 0.233056 7.3:-29599481 None:intergenic
CATTCTGGCCCCAAGGAATT+AGG 0.252109 7.3:-29601046 None:intergenic
GTCACACGCGCTGCGGATTC+TGG 0.263634 7.3:-29599104 None:intergenic
GGCGGCGGAGGTGGTGGTGG+TGG 0.302159 7.3:-29598955 None:intergenic
CTCACGTTGCCTAATTCCTT+GGG 0.309107 7.3:+29601037 MS.gene42232:CDS
GGTATGTGACGTTGGTTTAT+CGG 0.317494 7.3:+29599136 MS.gene42232:CDS
AAGGATTAGCAGTGGAAGTT+TGG 0.319848 7.3:+29602137 MS.gene42232:CDS
TGTCAAACATGTATCCATTT+TGG 0.323300 7.3:-29602031 None:intergenic
GGAGGGTATTGGATTCTATC+AGG 0.324275 7.3:+29601256 MS.gene42232:CDS
GGTGACCGGTTCAGGTTTCC+TGG 0.324820 7.3:+29599395 MS.gene42232:CDS
GTGGGTCGGGGACGTTATGA+TGG 0.342914 7.3:-29599082 None:intergenic
AATTAATCAGGTTGCAAGTT+GGG 0.358924 7.3:+29600848 MS.gene42232:intron
GCTGCGGATTCTGGTGGGTC+GGG 0.359022 7.3:-29599095 None:intergenic
ACAATATTCATGACCCAAAC+TGG 0.359706 7.3:-29602324 None:intergenic
TTGCAATGAATATGATTAGT+AGG 0.361054 7.3:-29601427 None:intergenic
AAAGGATATATTTACCATTC+TGG 0.364799 7.3:-29601061 None:intergenic
GCTCACGTTGCCTAATTCCT+TGG 0.368109 7.3:+29601036 MS.gene42232:CDS
GGTGGCCTGAGAGCCGTGAT+TGG 0.371034 7.3:+29599300 MS.gene42232:CDS
GGCGGAGGTGGTGGTGGTGG+AGG 0.375001 7.3:-29598952 None:intergenic
GCCGGAGATGGCGGCGGAGG+TGG 0.380019 7.3:-29598964 None:intergenic
CAATGATTGATGATCCAGTT+TGG 0.380101 7.3:+29602310 MS.gene42232:CDS
AGTCTTGAGAGAGGTTTGTT+GGG 0.382054 7.3:-29598864 None:intergenic
GAGTCTTGAGAGAGGTTTGT+TGG 0.382542 7.3:-29598865 None:intergenic
AAATTAGTTTGTGGGCAATC+AGG 0.386232 7.3:-29599017 None:intergenic
GATGGCGGCGGAGGTGGTGG+TGG 0.388279 7.3:-29598958 None:intergenic
ACCGCTTTAGACACCGGTTG+TGG 0.389827 7.3:+29599503 MS.gene42232:CDS
CGAGGAGTTCCAGCTTTGAT+TGG 0.389949 7.3:+29600957 MS.gene42232:CDS
ACTTGATATGAATGCTTACA+TGG 0.416586 7.3:+29602272 MS.gene42232:CDS
CGGTTCAGGTTTCCTGGTGG+TGG 0.418362 7.3:+29599401 MS.gene42232:CDS
GGAGATGGCGGCGGAGGTGG+TGG 0.420969 7.3:-29598961 None:intergenic
GGAACTGATGTTAGTCTCTC+AGG 0.432324 7.3:-29602111 None:intergenic
GTGGTGGAGGATTGTCGAAT+TGG 0.432397 7.3:+29602088 MS.gene42232:CDS
AAACTCATCAACCTTAAAGA+TGG 0.440201 7.3:+29599470 MS.gene42232:CDS
CAATAAATTGGGAGAGCCAT+TGG 0.441065 7.3:+29601284 MS.gene42232:CDS
AGGATCCTTTGCATCACAAA+AGG 0.443703 7.3:-29601479 None:intergenic
TCAATCGTCAATTCTTTATG+TGG 0.449181 7.3:-29599341 None:intergenic
CGCTGCGGATTCTGGTGGGT+CGG 0.450044 7.3:-29599096 None:intergenic
GGCGGAATGCGGTAGCCATA+TGG 0.458498 7.3:-29599275 None:intergenic
GGTGCATACATTGATGATAT+CGG 0.460690 7.3:+29599446 MS.gene42232:CDS
TGATTATCAGCTAGCAGAGC+CGG 0.461365 7.3:+29602233 MS.gene42232:CDS
CATTCATATCAAGTAAATTA+CGG 0.462099 7.3:-29602263 None:intergenic
TGCTACGTCCTGGAGGGTAT+TGG 0.462923 7.3:+29601245 MS.gene42232:CDS
GATTCTCCGGTGTCGGATAC+CGG 0.464111 7.3:+29599250 MS.gene42232:CDS
AGAAGGGTGACATTGCAATA+TGG 0.465380 7.3:+29601398 MS.gene42232:CDS
ATCAGCATGTATAAAGTCAT+AGG 0.466475 7.3:-29603080 None:intergenic
CTGAGAGCCGTGATTGGGCT+TGG 0.467893 7.3:+29599306 MS.gene42232:CDS
ATCAGGGCCACCAATAAATT+GGG 0.468994 7.3:+29601273 MS.gene42232:CDS
GGTGGAGTGGTGATTGTTGC+CGG 0.469902 7.3:-29598982 None:intergenic
GTGGCCTGAGAGCCGTGATT+GGG 0.470858 7.3:+29599301 MS.gene42232:CDS
ACCACCTCCGCCGCCATCTC+CGG 0.471918 7.3:+29598963 MS.gene42232:CDS
GTGTTGATCTCAGCCTGGAC+TGG 0.473116 7.3:-29602348 None:intergenic
TCAAAGAAAATACCGAGTTA+TGG 0.474678 7.3:+29602181 MS.gene42232:CDS
GTACATTACCATGCTGAGTC+AGG 0.477411 7.3:-29601499 None:intergenic
CGGAGAATCTCTTCTTTCTC+CGG 0.478678 7.3:-29599236 None:intergenic
GATTATCAGCTAGCAGAGCC+GGG 0.479427 7.3:+29602234 MS.gene42232:CDS
GCCATGTCAAAGGCTCTTGA+AGG 0.481184 7.3:-29601008 None:intergenic
GTGGTGATTGTTGCCGGAGA+TGG 0.482734 7.3:-29598976 None:intergenic
GCCATTGGAAAGGGTGGGAG+AGG 0.486448 7.3:+29601299 MS.gene42232:CDS
TGATCGGAACATATCAGAAC+TGG 0.488249 7.3:+29602397 MS.gene42232:CDS
GTTGCCGGAGATGGCGGCGG+AGG 0.488922 7.3:-29598967 None:intergenic
TAGAATTGCAGACCATGAAA+AGG 0.489139 7.3:+29603376 MS.gene42232:CDS
GTTTATGAACGCGGATTGAT+CGG 0.489841 7.3:+29602381 MS.gene42232:CDS
CAAGCCCAATCACGGCTCTC+AGG 0.490524 7.3:-29599305 None:intergenic
ACATTCTTCTTGAGATGGAT+AGG 0.492398 7.3:+29603261 MS.gene42232:CDS
TTGTAGCAGTCAAGCAGTAT+TGG 0.492709 7.3:+29603423 MS.gene42232:CDS
TGGCTCTCCCAATTTATTGG+TGG 0.493582 7.3:-29601280 None:intergenic
TGAGCTTCATGTGTATCTCT+TGG 0.497157 7.3:-29600915 None:intergenic
CACCACCAGGAAACCTGAAC+CGG 0.497526 7.3:-29599400 None:intergenic
CTGCGGATTCTGGTGGGTCG+GGG 0.498213 7.3:-29599094 None:intergenic
GTGGAGGTGAAATTAGTTTG+TGG 0.499075 7.3:-29599026 None:intergenic
CCGCTTTAGACACCGGTTGT+GGG 0.499535 7.3:+29599504 MS.gene42232:CDS
AATGATTGATGATCCAGTTT+GGG 0.502411 7.3:+29602311 MS.gene42232:CDS
ATAAAAGAAGTTAGTGGTGG+AGG 0.502506 7.3:+29602075 MS.gene42232:CDS
AGCGGTCGTTGAAATTTCCT+CGG 0.506218 7.3:+29599183 MS.gene42232:CDS
GTTGATAGAGTGCTACGTCC+TGG 0.506357 7.3:+29601235 MS.gene42232:CDS
CAATTTACCTGTCCTCATAG+AGG 0.506394 7.3:-29603114 None:intergenic
CTAATTCCTTGGGGCCAGAA+TGG 0.507755 7.3:+29601047 MS.gene42232:CDS
GTCATAGGTTCGAGGATAAG+TGG 0.507789 7.3:-29603065 None:intergenic
ACCATGTTTCCACGTGGCGC+TGG 0.508694 7.3:+29599425 MS.gene42232:CDS
GAATTAATCAGGTTGCAAGT+TGG 0.509111 7.3:+29600847 MS.gene42232:intron
ATTAGCAGTGGAAGTTTGGA+TGG 0.509258 7.3:+29602141 MS.gene42232:CDS
TTGGTGTCATTGCCACAATT+AGG 0.510592 7.3:+29600976 MS.gene42232:CDS
TCCTCTCCCACCCTTTCCAA+TGG 0.515898 7.3:-29601300 None:intergenic
TGGGCAATCAGGGCGGATGA+TGG 0.516410 7.3:-29599006 None:intergenic
AGAGGACATTCTTCTTGAGA+TGG 0.516456 7.3:+29603256 MS.gene42232:CDS
ATGTCAGATACCTCAGGAAG+TGG 0.522438 7.3:-29602054 None:intergenic
CGGAGAAAGAAGAGATTCTC+CGG 0.523770 7.3:+29599237 MS.gene42232:CDS
CATGAATATTGTTCCAGTCC+AGG 0.524227 7.3:+29602335 MS.gene42232:CDS
TGGAGGTGAAATTAGTTTGT+GGG 0.527107 7.3:-29599025 None:intergenic
GGTTCAGGTTTCCTGGTGGT+GGG 0.530907 7.3:+29599402 MS.gene42232:CDS
AAACTTCCACTGCTAATCCT+TGG 0.531039 7.3:-29602135 None:intergenic
AGTGATGGAAGAAGTGGTGG+TGG 0.532008 7.3:-29599045 None:intergenic
GATGGAAGAAGTGGTGGTGG+AGG 0.532285 7.3:-29599042 None:intergenic
ATTGGGAGAGCCATTGGAAA+GGG 0.532321 7.3:+29601290 MS.gene42232:CDS
AACTCATCAACCTTAAAGAT+GGG 0.532726 7.3:+29599471 MS.gene42232:CDS
TGATGTGGATGTGTTGTTGA+AGG 0.534088 7.3:+29603319 MS.gene42232:CDS
CGCTTTAGACACCGGTTGTG+GGG 0.535671 7.3:+29599505 MS.gene42232:CDS
TCTGACATAAAAGAAGTTAG+TGG 0.535713 7.3:+29602069 MS.gene42232:CDS
AATTAGTTTGTGGGCAATCA+GGG 0.536410 7.3:-29599016 None:intergenic
TGGGTCGGGGACGTTATGAT+GGG 0.536486 7.3:-29599081 None:intergenic
GCGGTCGTTGAAATTTCCTC+GGG 0.540278 7.3:+29599184 MS.gene42232:CDS
ATCAGGGCGGATGATGGTGG+TGG 0.540450 7.3:-29599000 None:intergenic
GGCGGATGATGGTGGTGGAG+TGG 0.540502 7.3:-29598995 None:intergenic
AGAATTGCAGACCATGAAAA+GGG 0.540625 7.3:+29603377 MS.gene42232:CDS
TCAAAGGCTCTTGAAGGGTA+AGG 0.540759 7.3:-29601002 None:intergenic
GCAATCAGGGCGGATGATGG+TGG 0.544035 7.3:-29599003 None:intergenic
ATTAATCAGGTTGCAAGTTG+GGG 0.545923 7.3:+29600849 MS.gene42232:intron
GTCCGAACCGCTTTAGACAC+CGG 0.546098 7.3:+29599497 MS.gene42232:CDS
GATAAACCAACGTCACATAC+CGG 0.546978 7.3:-29599134 None:intergenic
CTTCCACTGCTAATCCTTGG+TGG 0.547020 7.3:-29602132 None:intergenic
ACCAGCGCCACGTGGAAACA+TGG 0.547702 7.3:-29599426 None:intergenic
AACCGGTGTCTAAAGCGGTT+CGG 0.547844 7.3:-29599499 None:intergenic
ATTGTTGCCGGAGATGGCGG+CGG 0.550902 7.3:-29598970 None:intergenic
CAGGCCACCGCGGCGGAATG+CGG 0.551601 7.3:-29599286 None:intergenic
GCAATGACACCAATCAAAGC+TGG 0.552228 7.3:-29600966 None:intergenic
ACACGCGCTGCGGATTCTGG+TGG 0.554767 7.3:-29599101 None:intergenic
AATTTACCTGTCCTCATAGA+GGG 0.556718 7.3:-29603113 None:intergenic
GGAAACATGGTCCCACCACC+AGG 0.557115 7.3:-29599413 None:intergenic
GTGTGACAGATGTAATATAG+AGG 0.560024 7.3:+29603238 MS.gene42232:intron
ATCAAGAGTGATGGAAGAAG+TGG 0.562278 7.3:-29599051 None:intergenic
TCATTGCAAAATAACAAGAA+AGG 0.562481 7.3:+29601441 MS.gene42232:CDS
TGTCGGATACCGGCACCATA+TGG 0.563020 7.3:+29599260 MS.gene42232:CDS
CGCGTTAGTCACACGCGCTG+CGG 0.563602 7.3:-29599111 None:intergenic
CACGCGCTGCGGATTCTGGT+GGG 0.563714 7.3:-29599100 None:intergenic
TTATCGTGAGAGACACTGTC+CGG 0.564748 7.3:+29599217 MS.gene42232:CDS
TTGAGATGGATAGGATATTG+AGG 0.565653 7.3:+29603270 MS.gene42232:CDS
GGATCCTTTGCATCACAAAA+GGG 0.566364 7.3:-29601478 None:intergenic
CCCTTCAAGAGCCTTTGACA+TGG 0.567074 7.3:+29601007 MS.gene42232:CDS
ATTTGCAGATGCAATGCAAT+GGG 0.567404 7.3:+29603349 MS.gene42232:CDS
CGCAATATCACACTCCCTTG+TGG 0.570708 7.3:-29603293 None:intergenic
GGGAGAGCCATTGGAAAGGG+TGG 0.572041 7.3:+29601293 MS.gene42232:CDS
TGTGATATTGCGTGATGATG+TGG 0.575145 7.3:+29603304 MS.gene42232:CDS
CAAGTGTGTTGATCTCAGCC+TGG 0.581510 7.3:-29602353 None:intergenic
GATAGGATATTGAGGCCACA+AGG 0.581622 7.3:+29603278 MS.gene42232:CDS
AGAAAGTAGAGTCTTGAGAG+AGG 0.584274 7.3:-29598873 None:intergenic
CTTGATATGAATGCTTACAT+GGG 0.587393 7.3:+29602273 MS.gene42232:CDS
GATTTGCAGATGCAATGCAA+TGG 0.589141 7.3:+29603348 MS.gene42232:CDS
CAGGCTGAGATCAACACACT+TGG 0.589859 7.3:+29602354 MS.gene42232:CDS
GATAGAATCCAATACCCTCC+AGG 0.591531 7.3:-29601253 None:intergenic
GATATGAATGCTTACATGGG+AGG 0.592658 7.3:+29602276 MS.gene42232:CDS
GACCGCTGCACGTCCTCACA+CGG 0.592771 7.3:-29599167 None:intergenic
TATTTACCATTCTGGCCCCA+AGG 0.593811 7.3:-29601053 None:intergenic
AACTCTCTTCTTCCATAACT+CGG 0.594085 7.3:-29602193 None:intergenic
AAGAAGAGATTCTCCGGTGT+CGG 0.594261 7.3:+29599243 MS.gene42232:CDS
GACATAAAAGAAGTTAGTGG+TGG 0.594804 7.3:+29602072 MS.gene42232:CDS
CAAAGGATCCTGACTCAGCA+TGG 0.601524 7.3:+29601491 MS.gene42232:CDS
GAGGGTATTGGATTCTATCA+GGG 0.605036 7.3:+29601257 MS.gene42232:CDS
AGCGCGTGTGACTAACGCGC+CGG 0.610056 7.3:+29599115 MS.gene42232:CDS
AATTGGGAGAGCCATTGGAA+AGG 0.610487 7.3:+29601289 MS.gene42232:CDS
AGTAAATTACGGTATCTCCC+CGG 0.611082 7.3:-29602252 None:intergenic
CCATGTCAAAGGCTCTTGAA+GGG 0.615041 7.3:-29601007 None:intergenic
TAGCATACCAAGCCCAATCA+CGG 0.616099 7.3:-29599313 None:intergenic
TGAGCAATGAGCCATGTCAA+AGG 0.616646 7.3:-29601018 None:intergenic
ATGCGGTAGCCATATGGTGC+CGG 0.617366 7.3:-29599269 None:intergenic
ACAGACTTCAATTGAGAGAG+TGG 0.617914 7.3:+29601345 MS.gene42232:CDS
GGAGAGCCATTGGAAAGGGT+GGG 0.618351 7.3:+29601294 MS.gene42232:CDS
TCACGTTGCCTAATTCCTTG+GGG 0.618705 7.3:+29601038 MS.gene42232:CDS
GTTCAATTTGCTCTTGAACG+AGG 0.620941 7.3:+29600939 MS.gene42232:CDS
ATGTTTGACACCACTTCCTG+AGG 0.623014 7.3:+29602044 MS.gene42232:CDS
CTTGGTGTCGTTTATGAACG+CGG 0.623640 7.3:+29602372 MS.gene42232:CDS
ATGGTGCCGGTATCCGACAC+CGG 0.623922 7.3:-29599256 None:intergenic
AACGCGCCGGTATGTGACGT+TGG 0.628432 7.3:+29599128 MS.gene42232:CDS
CGGCTCTCAGGCCACCGCGG+CGG 0.628544 7.3:-29599293 None:intergenic
CTCCGTGTGAGGACGTGCAG+CGG 0.628570 7.3:+29599165 MS.gene42232:CDS
GTGATTGTTGCCGGAGATGG+CGG 0.629068 7.3:-29598973 None:intergenic
CGATAAATTAAATTCTCCCG+AGG 0.629535 7.3:-29599200 None:intergenic
AAGAGTGATGGAAGAAGTGG+TGG 0.632236 7.3:-29599048 None:intergenic
GGTGCAGAGGATGATGGTGA+AGG 0.637558 7.3:-29598898 None:intergenic
TGTATAAAGTCATAGGTTCG+AGG 0.642463 7.3:-29603073 None:intergenic
ATAGAGTGCTACGTCCTGGA+GGG 0.642534 7.3:+29601239 MS.gene42232:CDS
TCACGGCTCTCAGGCCACCG+CGG 0.646633 7.3:-29599296 None:intergenic
CCCACAACCGGTGTCTAAAG+CGG 0.650759 7.3:-29599504 None:intergenic
GGTGTCTAAAGCGGTTCGGA+CGG 0.653499 7.3:-29599495 None:intergenic
ATGTATGCACCAGCGCCACG+TGG 0.656665 7.3:-29599434 None:intergenic
GGTTCGAGGATAAGTGGACA+TGG 0.656711 7.3:-29603059 None:intergenic
GTTCCACCAAGGATTAGCAG+TGG 0.659990 7.3:+29602129 MS.gene42232:CDS
GATAGAGTGCTACGTCCTGG+AGG 0.664230 7.3:+29601238 MS.gene42232:CDS
ATTATCAGCTAGCAGAGCCG+GGG 0.679309 7.3:+29602235 MS.gene42232:CDS
ATCGGAGTATACTCCGTGTG+AGG 0.687381 7.3:+29599154 MS.gene42232:CDS
GCTACCGCATTCCGCCGCGG+TGG 0.688347 7.3:+29599282 MS.gene42232:CDS
TAGTTTGTGGGCAATCAGGG+CGG 0.688675 7.3:-29599013 None:intergenic
GACACTGCTAATATGTCACG+TGG 0.691648 7.3:-29600885 None:intergenic
GACTAACATCAGTTCCACCA+AGG 0.691717 7.3:+29602118 MS.gene42232:CDS
GACCGGTTCAGGTTTCCTGG+TGG 0.693052 7.3:+29599398 MS.gene42232:CDS
AGGGTGGGAGAGGACTCGTG+AGG 0.694135 7.3:+29601309 MS.gene42232:CDS
ATGGCTACCGCATTCCGCCG+CGG 0.698700 7.3:+29599279 MS.gene42232:CDS
ATAGGATATTGAGGCCACAA+GGG 0.708060 7.3:+29603279 MS.gene42232:CDS
AGGGTAAGGAAGCCTAATTG+TGG 0.711879 7.3:-29600988 None:intergenic
GGTGGGACCATGTTTCCACG+TGG 0.790969 7.3:+29599419 MS.gene42232:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTCAATTAACTTTTTT+AGG + chr7.3:29599732-29599751 MS.gene42232:intron 10.0%
!!! ATAAATTATTTTTTTTGGAA+TGG - chr7.3:29601933-29601952 None:intergenic 10.0%
!!! ATGAAAATTGTATATAATTT+TGG + chr7.3:29599959-29599978 MS.gene42232:intron 10.0%
!!! TAAGTTACAAATATTTTAAT+TGG + chr7.3:29600802-29600821 MS.gene42232:intron 10.0%
!!! TTTATAAATGTATATGATTT+TGG + chr7.3:29599922-29599941 MS.gene42232:intron 10.0%
!! AATTGATATATAGTTAGTTA+AGG + chr7.3:29600324-29600343 MS.gene42232:intron 15.0%
!! ACTTTAAATTTAATTATTGG+TGG - chr7.3:29602738-29602757 None:intergenic 15.0%
!! ATAATTAAAAGAATAGGAAA+AGG - chr7.3:29601524-29601543 None:intergenic 15.0%
!! ATGTTATAATTCGATATATA+TGG + chr7.3:29600256-29600275 MS.gene42232:intron 15.0%
!! TGCACTTTAAATTTAATTAT+TGG - chr7.3:29602741-29602760 None:intergenic 15.0%
!! TTTAAACACTAAACTAAAAA+TGG + chr7.3:29600231-29600250 MS.gene42232:intron 15.0%
!!! AATTTTCTTTTCTTCATTTT+AGG + chr7.3:29602004-29602023 MS.gene42232:intron 15.0%
!!! CTATATTGTATTTTTTTTGA+AGG + chr7.3:29600557-29600576 MS.gene42232:intron 15.0%
!!! GTTAATTGAAATTTTTCAAT+TGG - chr7.3:29599726-29599745 None:intergenic 15.0%
!!! TAAATAGTTATTTCTGAATT+TGG - chr7.3:29603154-29603173 None:intergenic 15.0%
!!! TATTTACCTTTCTTTAAAAT+TGG - chr7.3:29602462-29602481 None:intergenic 15.0%
!! AAACAATCTTCTTAAATTCT+TGG + chr7.3:29600450-29600469 MS.gene42232:intron 20.0%
!! AATAAAGCTATACTATAAGT+GGG - chr7.3:29602862-29602881 None:intergenic 20.0%
!! AGAAAAATAAAGTCAAATGT+AGG - chr7.3:29600088-29600107 None:intergenic 20.0%
!! CATTCATATCAAGTAAATTA+CGG - chr7.3:29602266-29602285 None:intergenic 20.0%
!! TATAGTTAGTTAAGGTATAT+TGG + chr7.3:29600332-29600351 MS.gene42232:intron 20.0%
!! TATATTTCAATTTCAAAGCA+TGG - chr7.3:29600283-29600302 None:intergenic 20.0%
!! TCACAATTCAATATCTTAAA+AGG - chr7.3:29601556-29601575 None:intergenic 20.0%
!! TGAAGTTTATATTGTTTGTT+GGG + chr7.3:29600648-29600667 MS.gene42232:intron 20.0%
!! TGAGAAAAAAAACCAAAATT+GGG + chr7.3:29599361-29599380 MS.gene42232:CDS 20.0%
!! TTGAAGTTTATATTGTTTGT+TGG + chr7.3:29600647-29600666 MS.gene42232:intron 20.0%
!! TTGAGAAAAAAAACCAAAAT+TGG + chr7.3:29599360-29599379 MS.gene42232:CDS 20.0%
!! TTGTTACAATTGAATTAATC+AGG + chr7.3:29600836-29600855 MS.gene42232:intron 20.0%
!!! ATTGAAATTTTTCAATTGGT+TGG - chr7.3:29599722-29599741 None:intergenic 20.0%
!!! TTGAAATTTTTCAATTGGTT+GGG - chr7.3:29599721-29599740 None:intergenic 20.0%
!!! TTGTTTTATGTATTTGTAGA+TGG + chr7.3:29601196-29601215 MS.gene42232:intron 20.0%
!!! TTTTAGGTTGATTTTAGTTT+TGG + chr7.3:29599748-29599767 MS.gene42232:intron 20.0%
! AAAGGATATATTTACCATTC+TGG - chr7.3:29601064-29601083 None:intergenic 25.0%
! AACAAGTAACTAAAGAGAAA+AGG - chr7.3:29601972-29601991 None:intergenic 25.0%
! ACAAGTAACTAAAGAGAAAA+GGG - chr7.3:29601971-29601990 None:intergenic 25.0%
! AGAATGGTAAATATATCCTT+TGG + chr7.3:29601063-29601082 MS.gene42232:intron 25.0%
! CAAATTCTTTATCATCTAAG+TGG - chr7.3:29601843-29601862 None:intergenic 25.0%
! CAATAAAGCTATACTATAAG+TGG - chr7.3:29602863-29602882 None:intergenic 25.0%
! CTATTGTAAAGGACAAAATT+AGG - chr7.3:29602933-29602952 None:intergenic 25.0%
! CTTTCAAATTAAAATGTGTC+TGG - chr7.3:29601145-29601164 None:intergenic 25.0%
! TCACAAAGTTATTATATGAG+TGG - chr7.3:29603207-29603226 None:intergenic 25.0%
! TCATTGCAAAATAACAAGAA+AGG + chr7.3:29601441-29601460 MS.gene42232:CDS 25.0%
! TTGCAATGAATATGATTAGT+AGG - chr7.3:29601430-29601449 None:intergenic 25.0%
!! ACTTTATAATTGTGCACTTT+TGG + chr7.3:29602797-29602816 MS.gene42232:intron 25.0%
!! CAATTTTCTGTCTATTGTAA+AGG - chr7.3:29602944-29602963 None:intergenic 25.0%
!! TATTTAGAACGTTTGAGAAT+TGG + chr7.3:29599795-29599814 MS.gene42232:intron 25.0%
!! TTTATACACCTTTTCAAAAG+TGG + chr7.3:29601893-29601912 MS.gene42232:intron 25.0%
!! TTTATTAGAGATGCTATTTG+AGG + chr7.3:29602554-29602573 MS.gene42232:intron 25.0%
!!! AACCAACCAATTTTAAAGAA+AGG + chr7.3:29602453-29602472 MS.gene42232:intron 25.0%
!!! AATTTTAGTGAGCTAAGATA+AGG - chr7.3:29602765-29602784 None:intergenic 25.0%
!!! TACCTTTCTTTAAAATTGGT+TGG - chr7.3:29602458-29602477 None:intergenic 25.0%
!!! TTCTTTAAAATTGGTTGGTT+AGG - chr7.3:29602453-29602472 None:intergenic 25.0%
!!! TTTCTTTGTTGATTTTGTTC+AGG - chr7.3:29603461-29603480 None:intergenic 25.0%
AAACTCATCAACCTTAAAGA+TGG + chr7.3:29599470-29599489 MS.gene42232:CDS 30.0%
AAAGGGAATGTAGGTTAATT+GGG + chr7.3:29599818-29599837 MS.gene42232:intron 30.0%
AACTCATCAACCTTAAAGAT+GGG + chr7.3:29599471-29599490 MS.gene42232:CDS 30.0%
ACTTGATATGAATGCTTACA+TGG + chr7.3:29602272-29602291 MS.gene42232:CDS 30.0%
ATCAGCATGTATAAAGTCAT+AGG - chr7.3:29603083-29603102 None:intergenic 30.0%
ATGTGATTGTGATCTCAAAT+GGG - chr7.3:29601586-29601605 None:intergenic 30.0%
CAAGTAACTAAAGAGAAAAG+GGG - chr7.3:29601970-29601989 None:intergenic 30.0%
CATGAAGTAACTTAGAAATC+AGG - chr7.3:29600697-29600716 None:intergenic 30.0%
CTACGAAAAGGATAGATTTA+CGG - chr7.3:29600378-29600397 None:intergenic 30.0%
CTGATTACAAAAAATGAGAG+AGG + chr7.3:29602584-29602603 MS.gene42232:intron 30.0%
CTTGATATGAATGCTTACAT+GGG + chr7.3:29602273-29602292 MS.gene42232:CDS 30.0%
GGACAGGTAAATTGTAAAAT+TGG + chr7.3:29603123-29603142 MS.gene42232:intron 30.0%
GTCTATTATTGTGACTTAGT+TGG + chr7.3:29600176-29600195 MS.gene42232:intron 30.0%
TCAAAGAAAATACCGAGTTA+TGG + chr7.3:29602181-29602200 MS.gene42232:CDS 30.0%
TCAATCGTCAATTCTTTATG+TGG - chr7.3:29599344-29599363 None:intergenic 30.0%
TCTGACATAAAAGAAGTTAG+TGG + chr7.3:29602069-29602088 MS.gene42232:CDS 30.0%
TGCATGATAGTAAAAGAAAC+CGG - chr7.3:29599569-29599588 None:intergenic 30.0%
TGGAAAAAACTAGTTCAGAA+GGG + chr7.3:29601382-29601401 MS.gene42232:CDS 30.0%
TTAGGAATGGCTATTAGAAA+GGG - chr7.3:29602435-29602454 None:intergenic 30.0%
TTCTAAGTTACTTCATGTTG+CGG + chr7.3:29600700-29600719 MS.gene42232:intron 30.0%
TTGGAAAAAACTAGTTCAGA+AGG + chr7.3:29601381-29601400 MS.gene42232:CDS 30.0%
! AATGATTGATGATCCAGTTT+GGG + chr7.3:29602311-29602330 MS.gene42232:CDS 30.0%
! AATTAATCAGGTTGCAAGTT+GGG + chr7.3:29600848-29600867 MS.gene42232:intron 30.0%
! AGCTCACTAAAATTTAGAGT+TGG + chr7.3:29602771-29602790 MS.gene42232:intron 30.0%
! ATTTTCAATGTCAATGAACC+GGG + chr7.3:29599602-29599621 MS.gene42232:intron 30.0%
! CAAAATTGGGTTCATTTTGA+AGG + chr7.3:29599374-29599393 MS.gene42232:CDS 30.0%
! CATTTTCAATGTCAATGAAC+CGG + chr7.3:29599601-29599620 MS.gene42232:intron 30.0%
! CTACAAGTATCTTTTCTCTT+TGG - chr7.3:29603409-29603428 None:intergenic 30.0%
! CTTCAAAATGAACCCAATTT+TGG - chr7.3:29599376-29599395 None:intergenic 30.0%
! CTTTATCATCTAAGTGGTTT+TGG - chr7.3:29601837-29601856 None:intergenic 30.0%
! TAAAATTGGTTGGTTAGGAA+TGG - chr7.3:29602448-29602467 None:intergenic 30.0%
! TCAAAAGTGGAGATTCTTTT+TGG + chr7.3:29601906-29601925 MS.gene42232:intron 30.0%
! TGTCAAACATGTATCCATTT+TGG - chr7.3:29602034-29602053 None:intergenic 30.0%
! TTATAATTGTGCACTTTTGG+AGG + chr7.3:29602800-29602819 MS.gene42232:intron 30.0%
! TTTTCATAAGAAACGATTCC+TGG - chr7.3:29599900-29599919 None:intergenic 30.0%
!! AAGAATCTCCACTTTTGAAA+AGG - chr7.3:29601904-29601923 None:intergenic 30.0%
!! TCATTTTAGGTACACCAAAA+TGG + chr7.3:29602017-29602036 MS.gene42232:intron 30.0%
AAAGCAAAATCAGTAGCACA+AGG - chr7.3:29601756-29601775 None:intergenic 35.0%
AACTCTCTTCTTCCATAACT+CGG - chr7.3:29602196-29602215 None:intergenic 35.0%
AAGAAAAATGAACCATGAGC+AGG + chr7.3:29599664-29599683 MS.gene42232:intron 35.0%
AATTTACCTGTCCTCATAGA+GGG - chr7.3:29603116-29603135 None:intergenic 35.0%
ACAATATTCATGACCCAAAC+TGG - chr7.3:29602327-29602346 None:intergenic 35.0%
ACATTCTTCTTGAGATGGAT+AGG + chr7.3:29603261-29603280 MS.gene42232:CDS 35.0%
AGAACGTTTGAGAATTGGAA+AGG + chr7.3:29599800-29599819 MS.gene42232:intron 35.0%
AGAATTGCAGACCATGAAAA+GGG + chr7.3:29603377-29603396 MS.gene42232:CDS 35.0%
AGAGAAAAAGGGGAACATAT+AGG + chr7.3:29600398-29600417 MS.gene42232:intron 35.0%
ATAAAAGAAGTTAGTGGTGG+AGG + chr7.3:29602075-29602094 MS.gene42232:CDS 35.0%
ATTTGCAGATGCAATGCAAT+GGG + chr7.3:29603349-29603368 MS.gene42232:CDS 35.0%
CGATAAATTAAATTCTCCCG+AGG - chr7.3:29599203-29599222 None:intergenic 35.0%
CGGTTCAAGAAAACTTAAAC+CGG - chr7.3:29599549-29599568 None:intergenic 35.0%
GAAAATTTCGTCACGTCTAT+AGG - chr7.3:29600211-29600230 None:intergenic 35.0%
GAAAGGGAATGTAGGTTAAT+TGG + chr7.3:29599817-29599836 MS.gene42232:intron 35.0%
GAACGTTTGAGAATTGGAAA+GGG + chr7.3:29599801-29599820 MS.gene42232:intron 35.0%
GACATAAAAGAAGTTAGTGG+TGG + chr7.3:29602072-29602091 MS.gene42232:CDS 35.0%
GACCAAAAAAACTGATGTCA+CGG + chr7.3:29601654-29601673 MS.gene42232:intron 35.0%
GATGTGATTGTGATCTCAAA+TGG - chr7.3:29601587-29601606 None:intergenic 35.0%
GCTTTACACATTTCATCACA+TGG + chr7.3:29602982-29603001 MS.gene42232:intron 35.0%
GGTTCAAGAAAACTTAAACC+GGG - chr7.3:29599548-29599567 None:intergenic 35.0%
GTGGTCAAATAAGACTCATA+TGG + chr7.3:29601632-29601651 MS.gene42232:intron 35.0%
GTGTGACAGATGTAATATAG+AGG + chr7.3:29603238-29603257 MS.gene42232:intron 35.0%
GTTAGGAATGGCTATTAGAA+AGG - chr7.3:29602436-29602455 None:intergenic 35.0%
GTTGTTGAACTAACCATAGA+GGG - chr7.3:29599639-29599658 None:intergenic 35.0%
TAATCATTGTGCGAAACAGA+CGG + chr7.3:29599982-29600001 MS.gene42232:intron 35.0%
TAGAATTGCAGACCATGAAA+AGG + chr7.3:29603376-29603395 MS.gene42232:CDS 35.0%
TATCACTGCCAAACTCTATT+TGG - chr7.3:29601814-29601833 None:intergenic 35.0%
TGTATAAAGTCATAGGTTCG+AGG - chr7.3:29603076-29603095 None:intergenic 35.0%
TGTTGTTGAACTAACCATAG+AGG - chr7.3:29599640-29599659 None:intergenic 35.0%
TTGAGATGGATAGGATATTG+AGG + chr7.3:29603270-29603289 MS.gene42232:CDS 35.0%
TTGTTGAACTAACCATAGAG+GGG - chr7.3:29599638-29599657 None:intergenic 35.0%
! AGTATCTTTTCTCTTTGGTG+TGG - chr7.3:29603404-29603423 None:intergenic 35.0%
! ATTAATCAGGTTGCAAGTTG+GGG + chr7.3:29600849-29600868 MS.gene42232:intron 35.0%
! CAATGATTGATGATCCAGTT+TGG + chr7.3:29602310-29602329 MS.gene42232:CDS 35.0%
! CCTTTTCGTAGAGAGAAAAA+GGG + chr7.3:29600387-29600406 MS.gene42232:intron 35.0%
! CTTTTCGTAGAGAGAAAAAG+GGG + chr7.3:29600388-29600407 MS.gene42232:intron 35.0%
! GAATTAATCAGGTTGCAAGT+TGG + chr7.3:29600847-29600866 MS.gene42232:intron 35.0%
! GGTGCATACATTGATGATAT+CGG + chr7.3:29599446-29599465 MS.gene42232:CDS 35.0%
! TCCTTTTCGTAGAGAGAAAA+AGG + chr7.3:29600386-29600405 MS.gene42232:intron 35.0%
! TCTTTTATGTCAGATACCTC+AGG - chr7.3:29602063-29602082 None:intergenic 35.0%
! TTCTCTTTTTACCCTCTATG+AGG + chr7.3:29603102-29603121 MS.gene42232:CDS 35.0%
!! AAATGAGAGAGGTTTGCTAA+AGG + chr7.3:29602595-29602614 MS.gene42232:intron 35.0%
!! AAATTAGTTTGTGGGCAATC+AGG - chr7.3:29599020-29599039 None:intergenic 35.0%
!! AATTAGTTTGTGGGCAATCA+GGG - chr7.3:29599019-29599038 None:intergenic 35.0%
!! CGGTTTAAGTTTTCTTGAAC+CGG + chr7.3:29599547-29599566 MS.gene42232:intron 35.0%
!! GCACAAATTTGTTGTATCAC+TGG + chr7.3:29600746-29600765 MS.gene42232:intron 35.0%
!! TGGAGGTGAAATTAGTTTGT+GGG - chr7.3:29599028-29599047 None:intergenic 35.0%
!!! GTTGATTTTGTTCAGGTTGT+GGG - chr7.3:29603454-29603473 None:intergenic 35.0%
!!! TGTTGATTTTGTTCAGGTTG+TGG - chr7.3:29603455-29603474 None:intergenic 35.0%
!!! TTGATTTTGTTCAGGTTGTG+GGG - chr7.3:29603453-29603472 None:intergenic 35.0%
AAAAACTGATGTCACGGTCA+CGG + chr7.3:29601660-29601679 MS.gene42232:intron 40.0%
AAACTTCCACTGCTAATCCT+TGG - chr7.3:29602138-29602157 None:intergenic 40.0%
AATCATTGTGCGAAACAGAC+GGG + chr7.3:29599983-29600002 MS.gene42232:intron 40.0%
ACAGACTTCAATTGAGAGAG+TGG + chr7.3:29601345-29601364 MS.gene42232:CDS 40.0%
AGAAAGTAGAGTCTTGAGAG+AGG - chr7.3:29598876-29598895 None:intergenic 40.0%
AGAAGGGTGACATTGCAATA+TGG + chr7.3:29601398-29601417 MS.gene42232:CDS 40.0%
AGAGGACATTCTTCTTGAGA+TGG + chr7.3:29603256-29603275 MS.gene42232:CDS 40.0%
AGGATCCTTTGCATCACAAA+AGG - chr7.3:29601482-29601501 None:intergenic 40.0%
AGTAAATTACGGTATCTCCC+CGG - chr7.3:29602255-29602274 None:intergenic 40.0%
ATAGGATATTGAGGCCACAA+GGG + chr7.3:29603279-29603298 MS.gene42232:CDS 40.0%
ATCAGGGCCACCAATAAATT+GGG + chr7.3:29601273-29601292 MS.gene42232:CDS 40.0%
ATTAGCAGTGGAAGTTTGGA+TGG + chr7.3:29602141-29602160 MS.gene42232:CDS 40.0%
CAATAAATTGGGAGAGCCAT+TGG + chr7.3:29601284-29601303 MS.gene42232:CDS 40.0%
CAATGGCTCTCCCAATTTAT+TGG - chr7.3:29601286-29601305 None:intergenic 40.0%
CAATTTACCTGTCCTCATAG+AGG - chr7.3:29603117-29603136 None:intergenic 40.0%
CATCGTGATCGTTAAGATTG+CGG + chr7.3:29601603-29601622 MS.gene42232:intron 40.0%
CATGAATATTGTTCCAGTCC+AGG + chr7.3:29602335-29602354 MS.gene42232:CDS 40.0%
GAGAATTGGAAAGGGAATGT+AGG + chr7.3:29599809-29599828 MS.gene42232:intron 40.0%
GATAAACCAACGTCACATAC+CGG - chr7.3:29599137-29599156 None:intergenic 40.0%
GATATGAATGCTTACATGGG+AGG + chr7.3:29602276-29602295 MS.gene42232:CDS 40.0%
GATTTGCAGATGCAATGCAA+TGG + chr7.3:29603348-29603367 MS.gene42232:CDS 40.0%
GGATCCTTTGCATCACAAAA+GGG - chr7.3:29601481-29601500 None:intergenic 40.0%
GGCTGAAAAATCAAGAGTGA+TGG - chr7.3:29599063-29599082 None:intergenic 40.0%
GTTAAGATTGCGGAGAATTG+TGG + chr7.3:29601613-29601632 MS.gene42232:intron 40.0%
TATCAGGGCCACCAATAAAT+TGG + chr7.3:29601272-29601291 MS.gene42232:CDS 40.0%
TGACACATGTTAGACACCAA+AGG - chr7.3:29601082-29601101 None:intergenic 40.0%
TGAGCTTCATGTGTATCTCT+TGG - chr7.3:29600918-29600937 None:intergenic 40.0%
TGATCGGAACATATCAGAAC+TGG + chr7.3:29602397-29602416 MS.gene42232:CDS 40.0%
TTCTTTCCTTAGTTGCTTCC+AGG + chr7.3:29599879-29599898 MS.gene42232:intron 40.0%
TTGGGTCCAAACCTTGAATA+GGG - chr7.3:29599703-29599722 None:intergenic 40.0%
TTGTAGCAGTCAAGCAGTAT+TGG + chr7.3:29603423-29603442 MS.gene42232:CDS 40.0%
! AAAAAAGGTGCAGAGGATGA+TGG - chr7.3:29598907-29598926 None:intergenic 40.0%
! AAGGATTAGCAGTGGAAGTT+TGG + chr7.3:29602137-29602156 MS.gene42232:CDS 40.0%
! AGTCTTGAGAGAGGTTTGTT+GGG - chr7.3:29598867-29598886 None:intergenic 40.0%
! ATCAAGAGTGATGGAAGAAG+TGG - chr7.3:29599054-29599073 None:intergenic 40.0%
! CCCTTTTTCTCTCTACGAAA+AGG - chr7.3:29600390-29600409 None:intergenic 40.0%
! GTACGTTTTTCTTGAACTCC+CGG + chr7.3:29599527-29599546 MS.gene42232:intron 40.0%
! GTGGAGGTGAAATTAGTTTG+TGG - chr7.3:29599029-29599048 None:intergenic 40.0%
! GTTCAATTTGCTCTTGAACG+AGG + chr7.3:29600939-29600958 MS.gene42232:CDS 40.0%
! GTTTATGAACGCGGATTGAT+CGG + chr7.3:29602381-29602400 MS.gene42232:CDS 40.0%
! TAGACCCTTTTGTGATGCAA+AGG + chr7.3:29601474-29601493 MS.gene42232:CDS 40.0%
! TGATGTGGATGTGTTGTTGA+AGG + chr7.3:29603319-29603338 MS.gene42232:CDS 40.0%
! TGTGATATTGCGTGATGATG+TGG + chr7.3:29603304-29603323 MS.gene42232:CDS 40.0%
! TTGGTGTCTAACATGTGTCA+GGG + chr7.3:29601082-29601101 MS.gene42232:intron 40.0%
! TTTTTACCCTCTATGAGGAC+AGG + chr7.3:29603107-29603126 MS.gene42232:CDS 40.0%
!! GAGGGTATTGGATTCTATCA+GGG + chr7.3:29601257-29601276 MS.gene42232:CDS 40.0%
!! GGTATGTGACGTTGGTTTAT+CGG + chr7.3:29599136-29599155 MS.gene42232:CDS 40.0%
!! TTGGTGTCATTGCCACAATT+AGG + chr7.3:29600976-29600995 MS.gene42232:CDS 40.0%
!! TTTGGTGTCTAACATGTGTC+AGG + chr7.3:29601081-29601100 MS.gene42232:intron 40.0%
!!! GACCGTGACATCAGTTTTTT+TGG - chr7.3:29601659-29601678 None:intergenic 40.0%
!!! TGCACCTTTTTTTACCTCCT+TGG + chr7.3:29598915-29598934 MS.gene42232:CDS 40.0%
AAGAAGAGATTCTCCGGTGT+CGG + chr7.3:29599243-29599262 MS.gene42232:CDS 45.0%
AATTGGGAGAGCCATTGGAA+AGG + chr7.3:29601289-29601308 MS.gene42232:CDS 45.0%
ACCAATCACATTCCTGCTCA+TGG - chr7.3:29599679-29599698 None:intergenic 45.0%
ACCATGAGCAGGAATGTGAT+TGG + chr7.3:29599675-29599694 MS.gene42232:intron 45.0%
ACGATTCCTGGAAGCAACTA+AGG - chr7.3:29599888-29599907 None:intergenic 45.0%
AGAAAAACGTACCCCACAAC+CGG - chr7.3:29599519-29599538 None:intergenic 45.0%
AGCGGTCGTTGAAATTTCCT+CGG + chr7.3:29599183-29599202 MS.gene42232:CDS 45.0%
AGGGTAAGGAAGCCTAATTG+TGG - chr7.3:29600991-29601010 None:intergenic 45.0%
ATGTCAGATACCTCAGGAAG+TGG - chr7.3:29602057-29602076 None:intergenic 45.0%
ATGTTTGACACCACTTCCTG+AGG + chr7.3:29602044-29602063 MS.gene42232:CDS 45.0%
ATTGGGAGAGCCATTGGAAA+GGG + chr7.3:29601290-29601309 MS.gene42232:CDS 45.0%
CATGGCACTTGTGTTGTGTT+CGG + chr7.3:29601117-29601136 MS.gene42232:intron 45.0%
CCATGTCAAAGGCTCTTGAA+GGG - chr7.3:29601010-29601029 None:intergenic 45.0%
CGGAGAAAGAAGAGATTCTC+CGG + chr7.3:29599237-29599256 MS.gene42232:CDS 45.0%
CGGAGAATCTCTTCTTTCTC+CGG - chr7.3:29599239-29599258 None:intergenic 45.0%
CTCACGTTGCCTAATTCCTT+GGG + chr7.3:29601037-29601056 MS.gene42232:CDS 45.0%
GACACTGCTAATATGTCACG+TGG - chr7.3:29600888-29600907 None:intergenic 45.0%
GACTAACATCAGTTCCACCA+AGG + chr7.3:29602118-29602137 MS.gene42232:CDS 45.0%
GAGGCCAAGGAGGTAAAAAA+AGG - chr7.3:29598922-29598941 None:intergenic 45.0%
GAGTCTTGAGAGAGGTTTGT+TGG - chr7.3:29598868-29598887 None:intergenic 45.0%
GAGTGGCAAAAAGTCTCTGT+TGG + chr7.3:29601362-29601381 MS.gene42232:CDS 45.0%
GATAGAATCCAATACCCTCC+AGG - chr7.3:29601256-29601275 None:intergenic 45.0%
GATAGGATATTGAGGCCACA+AGG + chr7.3:29603278-29603297 MS.gene42232:CDS 45.0%
GCAATGACACCAATCAAAGC+TGG - chr7.3:29600969-29600988 None:intergenic 45.0%
GTACATTACCATGCTGAGTC+AGG - chr7.3:29601502-29601521 None:intergenic 45.0%
GTCATAGGTTCGAGGATAAG+TGG - chr7.3:29603068-29603087 None:intergenic 45.0%
GTTGGGTCCAAACCTTGAAT+AGG - chr7.3:29599704-29599723 None:intergenic 45.0%
TAGCATACCAAGCCCAATCA+CGG - chr7.3:29599316-29599335 None:intergenic 45.0%
TATTTACCATTCTGGCCCCA+AGG - chr7.3:29601056-29601075 None:intergenic 45.0%
TCAAAGGCTCTTGAAGGGTA+AGG - chr7.3:29601005-29601024 None:intergenic 45.0%
TCACGTTGCCTAATTCCTTG+GGG + chr7.3:29601038-29601057 MS.gene42232:CDS 45.0%
TCAGGGTCTAACATGTGTCA+TGG + chr7.3:29601099-29601118 MS.gene42232:intron 45.0%
TGAGCAATGAGCCATGTCAA+AGG - chr7.3:29601021-29601040 None:intergenic 45.0%
TGATTATCAGCTAGCAGAGC+CGG + chr7.3:29602233-29602252 MS.gene42232:CDS 45.0%
TGGCTCTCCCAATTTATTGG+TGG - chr7.3:29601283-29601302 None:intergenic 45.0%
TGGGTCCAAACCTTGAATAG+GGG - chr7.3:29599702-29599721 None:intergenic 45.0%
TGTGATCTCAAATGGGACTG+TGG - chr7.3:29601579-29601598 None:intergenic 45.0%
TTATCGTGAGAGACACTGTC+CGG + chr7.3:29599217-29599236 MS.gene42232:CDS 45.0%
TTCAATGTCAATGAACCGGG+TGG + chr7.3:29599605-29599624 MS.gene42232:intron 45.0%
TTGGTCCCCTATTCAAGGTT+TGG + chr7.3:29599694-29599713 MS.gene42232:intron 45.0%
! AAGAGTGATGGAAGAAGTGG+TGG - chr7.3:29599051-29599070 None:intergenic 45.0%
! GCTTGCTGCCAAATAGAGTT+TGG + chr7.3:29601803-29601822 MS.gene42232:intron 45.0%
! GGAACTGATGTTAGTCTCTC+AGG - chr7.3:29602114-29602133 None:intergenic 45.0%
! GGAGGTAAAAAAAGGTGCAG+AGG - chr7.3:29598914-29598933 None:intergenic 45.0%
! TGTGATTGGTCCCCTATTCA+AGG + chr7.3:29599689-29599708 MS.gene42232:intron 45.0%
!! ATTTTGAAGGTGACCGGTTC+AGG + chr7.3:29599387-29599406 MS.gene42232:CDS 45.0%
!! CTTGGTGTCGTTTATGAACG+CGG + chr7.3:29602372-29602391 MS.gene42232:CDS 45.0%
!! GGAGGGTATTGGATTCTATC+AGG + chr7.3:29601256-29601275 MS.gene42232:CDS 45.0%
!! GGGTTCATTTTGAAGGTGAC+CGG + chr7.3:29599381-29599400 MS.gene42232:CDS 45.0%
!! TTTGGTGTGGTCCCTTTTCA+TGG - chr7.3:29603391-29603410 None:intergenic 45.0%
!!! ACTGCTTTTTGTCTCCACTC+AGG + chr7.3:29603029-29603048 MS.gene42232:intron 45.0%
!!! TTTTTTACCTCCTTGGCCTC+TGG + chr7.3:29598922-29598941 MS.gene42232:CDS 45.0%
!! TAATTAATAATTAAAAGAAT+AGG - chr7.3:29601530-29601549 None:intergenic 5.0%
!!! AACAAATAAATTATTTTTTT+TGG - chr7.3:29601938-29601957 None:intergenic 5.0%
ATCGGAGTATACTCCGTGTG+AGG + chr7.3:29599154-29599173 MS.gene42232:CDS 50.0%
ATTATCAGCTAGCAGAGCCG+GGG + chr7.3:29602235-29602254 MS.gene42232:CDS 50.0%
CAAAGGATCCTGACTCAGCA+TGG + chr7.3:29601491-29601510 MS.gene42232:CDS 50.0%
CAGGCTGAGATCAACACACT+TGG + chr7.3:29602354-29602373 MS.gene42232:CDS 50.0%
CATTCTGGCCCCAAGGAATT+AGG - chr7.3:29601049-29601068 None:intergenic 50.0%
CCCTTCAAGAGCCTTTGACA+TGG + chr7.3:29601007-29601026 MS.gene42232:CDS 50.0%
CGCAATATCACACTCCCTTG+TGG - chr7.3:29603296-29603315 None:intergenic 50.0%
CTAATTCCTTGGGGCCAGAA+TGG + chr7.3:29601047-29601066 MS.gene42232:CDS 50.0%
CTTCCACTGCTAATCCTTGG+TGG - chr7.3:29602135-29602154 None:intergenic 50.0%
GATTATCAGCTAGCAGAGCC+GGG + chr7.3:29602234-29602253 MS.gene42232:CDS 50.0%
GCCATGTCAAAGGCTCTTGA+AGG - chr7.3:29601011-29601030 None:intergenic 50.0%
GCGGTCGTTGAAATTTCCTC+GGG + chr7.3:29599184-29599203 MS.gene42232:CDS 50.0%
GCTCACGTTGCCTAATTCCT+TGG + chr7.3:29601036-29601055 MS.gene42232:CDS 50.0%
GGTTCGAGGATAAGTGGACA+TGG - chr7.3:29603062-29603081 None:intergenic 50.0%
TTCGGACGGACCCATCTTTA+AGG - chr7.3:29599484-29599503 None:intergenic 50.0%
! AACCGGTGTCTAAAGCGGTT+CGG - chr7.3:29599502-29599521 None:intergenic 50.0%
! AGTGATGGAAGAAGTGGTGG+TGG - chr7.3:29599048-29599067 None:intergenic 50.0%
! ATAGAGTGCTACGTCCTGGA+GGG + chr7.3:29601239-29601258 MS.gene42232:CDS 50.0%
! CAAGTGTGTTGATCTCAGCC+TGG - chr7.3:29602356-29602375 None:intergenic 50.0%
! CGAGGAGTTCCAGCTTTGAT+TGG + chr7.3:29600957-29600976 MS.gene42232:CDS 50.0%
! GTGGTGGAGGATTGTCGAAT+TGG + chr7.3:29602088-29602107 MS.gene42232:CDS 50.0%
! GTTCCACCAAGGATTAGCAG+TGG + chr7.3:29602129-29602148 MS.gene42232:CDS 50.0%
! GTTGATAGAGTGCTACGTCC+TGG + chr7.3:29601235-29601254 MS.gene42232:CDS 50.0%
! TAGTTTGTGGGCAATCAGGG+CGG - chr7.3:29599016-29599035 None:intergenic 50.0%
ATGCGGTAGCCATATGGTGC+CGG - chr7.3:29599272-29599291 None:intergenic 55.0%
CACCACCAGGAAACCTGAAC+CGG - chr7.3:29599403-29599422 None:intergenic 55.0%
CCCACAACCGGTGTCTAAAG+CGG - chr7.3:29599507-29599526 None:intergenic 55.0%
GACATGGCTTCACACCTGAG+TGG - chr7.3:29603046-29603065 None:intergenic 55.0%
GGAGAGCCATTGGAAAGGGT+GGG + chr7.3:29601294-29601313 MS.gene42232:CDS 55.0%
GGTGGAGTGGTGATTGTTGC+CGG - chr7.3:29598985-29599004 None:intergenic 55.0%
GGTGGTTCACTTCCCCTCTA+TGG + chr7.3:29599623-29599642 MS.gene42232:intron 55.0%
GTGATTGTTGCCGGAGATGG+CGG - chr7.3:29598976-29598995 None:intergenic 55.0%
GTGGTGATTGTTGCCGGAGA+TGG - chr7.3:29598979-29598998 None:intergenic 55.0%
TAGAGGGGAAGTGAACCACC+CGG - chr7.3:29599623-29599642 None:intergenic 55.0%
TCCTCTCCCACCCTTTCCAA+TGG - chr7.3:29601303-29601322 None:intergenic 55.0%
TGGGTCGGGGACGTTATGAT+GGG - chr7.3:29599084-29599103 None:intergenic 55.0%
TGTCGGATACCGGCACCATA+TGG + chr7.3:29599260-29599279 MS.gene42232:CDS 55.0%
! ACCGCTTTAGACACCGGTTG+TGG + chr7.3:29599503-29599522 MS.gene42232:CDS 55.0%
! AGGAGTTTTGCCAGAGGCCA+AGG - chr7.3:29598935-29598954 None:intergenic 55.0%
! AGTTTTGCCAGAGGCCAAGG+AGG - chr7.3:29598932-29598951 None:intergenic 55.0%
! CCGCTTTAGACACCGGTTGT+GGG + chr7.3:29599504-29599523 MS.gene42232:CDS 55.0%
! CGCTTTAGACACCGGTTGTG+GGG + chr7.3:29599505-29599524 MS.gene42232:CDS 55.0%
! GATAGAGTGCTACGTCCTGG+AGG + chr7.3:29601238-29601257 MS.gene42232:CDS 55.0%
! GATTCTCCGGTGTCGGATAC+CGG + chr7.3:29599250-29599269 MS.gene42232:CDS 55.0%
! GGTGCAGAGGATGATGGTGA+AGG - chr7.3:29598901-29598920 None:intergenic 55.0%
! GGTGTCTAAAGCGGTTCGGA+CGG - chr7.3:29599498-29599517 None:intergenic 55.0%
! GGTTCAGGTTTCCTGGTGGT+GGG + chr7.3:29599402-29599421 MS.gene42232:CDS 55.0%
! GTCCGAACCGCTTTAGACAC+CGG + chr7.3:29599497-29599516 MS.gene42232:CDS 55.0%
! GTGTTGATCTCAGCCTGGAC+TGG - chr7.3:29602351-29602370 None:intergenic 55.0%
! TGCTACGTCCTGGAGGGTAT+TGG + chr7.3:29601245-29601264 MS.gene42232:CDS 55.0%
! TGGTGGAGGAGTTTTGCCAG+AGG - chr7.3:29598941-29598960 None:intergenic 55.0%
!! GATGGAAGAAGTGGTGGTGG+AGG - chr7.3:29599045-29599064 None:intergenic 55.0%
ACCAGCGCCACGTGGAAACA+TGG - chr7.3:29599429-29599448 None:intergenic 60.0%
ACCATGTTTCCACGTGGCGC+TGG + chr7.3:29599425-29599444 MS.gene42232:CDS 60.0%
ATGTATGCACCAGCGCCACG+TGG - chr7.3:29599437-29599456 None:intergenic 60.0%
CAAGCCCAATCACGGCTCTC+AGG - chr7.3:29599308-29599327 None:intergenic 60.0%
CTGAGAGCCGTGATTGGGCT+TGG + chr7.3:29599306-29599325 MS.gene42232:CDS 60.0%
GCCATTGGAAAGGGTGGGAG+AGG + chr7.3:29601299-29601318 MS.gene42232:CDS 60.0%
GGAAACATGGTCCCACCACC+AGG - chr7.3:29599416-29599435 None:intergenic 60.0%
GGCGGAATGCGGTAGCCATA+TGG - chr7.3:29599278-29599297 None:intergenic 60.0%
GGGAGAGCCATTGGAAAGGG+TGG + chr7.3:29601293-29601312 MS.gene42232:CDS 60.0%
GGTGGGACCATGTTTCCACG+TGG + chr7.3:29599419-29599438 MS.gene42232:CDS 60.0%
GTGGCCTGAGAGCCGTGATT+GGG + chr7.3:29599301-29599320 MS.gene42232:CDS 60.0%
GTGGGTCGGGGACGTTATGA+TGG - chr7.3:29599085-29599104 None:intergenic 60.0%
TGGGCAATCAGGGCGGATGA+TGG - chr7.3:29599009-29599028 None:intergenic 60.0%
! AACGCGCCGGTATGTGACGT+TGG + chr7.3:29599128-29599147 MS.gene42232:CDS 60.0%
! ATTGTTGCCGGAGATGGCGG+CGG - chr7.3:29598973-29598992 None:intergenic 60.0%
! CGGTTCAGGTTTCCTGGTGG+TGG + chr7.3:29599401-29599420 MS.gene42232:CDS 60.0%
! GACCGGTTCAGGTTTCCTGG+TGG + chr7.3:29599398-29599417 MS.gene42232:CDS 60.0%
! GCAATCAGGGCGGATGATGG+TGG - chr7.3:29599006-29599025 None:intergenic 60.0%
! GGTGACCGGTTCAGGTTTCC+TGG + chr7.3:29599395-29599414 MS.gene42232:CDS 60.0%
!! ATCAGGGCGGATGATGGTGG+TGG - chr7.3:29599003-29599022 None:intergenic 60.0%
!! ATGGTGCCGGTATCCGACAC+CGG - chr7.3:29599259-29599278 None:intergenic 60.0%
ACACGCGCTGCGGATTCTGG+TGG - chr7.3:29599104-29599123 None:intergenic 65.0%
AGCGCGTGTGACTAACGCGC+CGG + chr7.3:29599115-29599134 MS.gene42232:CDS 65.0%
AGGGTGGGAGAGGACTCGTG+AGG + chr7.3:29601309-29601328 MS.gene42232:CDS 65.0%
ATGGCTACCGCATTCCGCCG+CGG + chr7.3:29599279-29599298 MS.gene42232:CDS 65.0%
CACGCGCTGCGGATTCTGGT+GGG - chr7.3:29599103-29599122 None:intergenic 65.0%
CGCGTTAGTCACACGCGCTG+CGG - chr7.3:29599114-29599133 None:intergenic 65.0%
CTCCGTGTGAGGACGTGCAG+CGG + chr7.3:29599165-29599184 MS.gene42232:CDS 65.0%
GACCGCTGCACGTCCTCACA+CGG - chr7.3:29599170-29599189 None:intergenic 65.0%
GGTGGCCTGAGAGCCGTGAT+TGG + chr7.3:29599300-29599319 MS.gene42232:CDS 65.0%
GTCACACGCGCTGCGGATTC+TGG - chr7.3:29599107-29599126 None:intergenic 65.0%
! CGCTGCGGATTCTGGTGGGT+CGG - chr7.3:29599099-29599118 None:intergenic 65.0%
! CTGCGGATTCTGGTGGGTCG+GGG - chr7.3:29599097-29599116 None:intergenic 65.0%
! GCTGCGGATTCTGGTGGGTC+GGG - chr7.3:29599098-29599117 None:intergenic 65.0%
!! GGCGGATGATGGTGGTGGAG+TGG - chr7.3:29598998-29599017 None:intergenic 65.0%
ACCACCTCCGCCGCCATCTC+CGG + chr7.3:29598963-29598982 MS.gene42232:CDS 70.0%
TCACGGCTCTCAGGCCACCG+CGG - chr7.3:29599299-29599318 None:intergenic 70.0%
CAGGCCACCGCGGCGGAATG+CGG - chr7.3:29599289-29599308 None:intergenic 75.0%
GCTACCGCATTCCGCCGCGG+TGG + chr7.3:29599282-29599301 MS.gene42232:CDS 75.0%
! GATGGCGGCGGAGGTGGTGG+TGG - chr7.3:29598961-29598980 None:intergenic 75.0%
! GGAGATGGCGGCGGAGGTGG+TGG - chr7.3:29598964-29598983 None:intergenic 75.0%
! GTTGCCGGAGATGGCGGCGG+AGG - chr7.3:29598970-29598989 None:intergenic 75.0%
!! GGCGGAGGTGGTGGTGGTGG+AGG - chr7.3:29598955-29598974 None:intergenic 75.0%
! CGGCTCTCAGGCCACCGCGG+CGG - chr7.3:29599296-29599315 None:intergenic 80.0%
!! GCCGGAGATGGCGGCGGAGG+TGG - chr7.3:29598967-29598986 None:intergenic 80.0%
!!! GGCGGCGGAGGTGGTGGTGG+TGG - chr7.3:29598958-29598977 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 29598828 29603487 29598828 ID=MS.gene42232
chr7.3 mRNA 29598828 29603487 29598828 ID=MS.gene42232.t1;Parent=MS.gene42232
chr7.3 exon 29598828 29599526 29598828 ID=MS.gene42232.t1.exon1;Parent=MS.gene42232.t1
chr7.3 CDS 29598828 29599526 29598828 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
chr7.3 exon 29600858 29601068 29600858 ID=MS.gene42232.t1.exon2;Parent=MS.gene42232.t1
chr7.3 CDS 29600858 29601068 29600858 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
chr7.3 exon 29601215 29601512 29601215 ID=MS.gene42232.t1.exon3;Parent=MS.gene42232.t1
chr7.3 CDS 29601215 29601512 29601215 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
chr7.3 exon 29602026 29602418 29602026 ID=MS.gene42232.t1.exon4;Parent=MS.gene42232.t1
chr7.3 CDS 29602026 29602418 29602026 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
chr7.3 exon 29603051 29603128 29603051 ID=MS.gene42232.t1.exon5;Parent=MS.gene42232.t1
chr7.3 CDS 29603051 29603128 29603051 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
chr7.3 exon 29603247 29603487 29603247 ID=MS.gene42232.t1.exon6;Parent=MS.gene42232.t1
chr7.3 CDS 29603247 29603487 29603247 ID=cds.MS.gene42232.t1;Parent=MS.gene42232.t1
Gene Sequence

>MS.gene42232

ATGGCTAATTCTTTCTTATCAATTTTCAACAAGAAACCCAACAAACCTCTCTCAAGACTCTACTTTCTTACCTTCACCATCATCCTCTGCACCTTTTTTTACCTCCTTGGCCTCTGGCAAAACTCCTCCACCACCACCACCTCCGCCGCCATCTCCGGCAACAATCACCACTCCACCACCATCATCCGCCCTGATTGCCCACAAACTAATTTCACCTCCACCACCACTTCTTCCATCACTCTTGATTTTTCAGCCCATCATAACGTCCCCGACCCACCAGAATCCGCAGCGCGTGTGACTAACGCGCCGGTATGTGACGTTGGTTTATCGGAGTATACTCCGTGTGAGGACGTGCAGCGGTCGTTGAAATTTCCTCGGGAGAATTTAATTTATCGTGAGAGACACTGTCCGGAGAAAGAAGAGATTCTCCGGTGTCGGATACCGGCACCATATGGCTACCGCATTCCGCCGCGGTGGCCTGAGAGCCGTGATTGGGCTTGGTATGCTAATGTGCCACATAAAGAATTGACGATTGAGAAAAAAAACCAAAATTGGGTTCATTTTGAAGGTGACCGGTTCAGGTTTCCTGGTGGTGGGACCATGTTTCCACGTGGCGCTGGTGCATACATTGATGATATCGGAAAACTCATCAACCTTAAAGATGGGTCCGTCCGAACCGCTTTAGACACCGGTTGTGGGGTACGTTTTTCTTGAACTCCCGGTTTAAGTTTTCTTGAACCGGTTTCTTTTACTATCATGCATATGCATGTTTTCATTTTCAATGTCAATGAACCGGGTGGTTCACTTCCCCTCTATGGTTAGTTCAACAACATTCGAAGAAAAATGAACCATGAGCAGGAATGTGATTGGTCCCCTATTCAAGGTTTGGACCCAACCAATTGAAAAATTTCAATTAACTTTTTTAGGTTGATTTTAGTTTTGGTAATATTTTTTGAGATTTTATCTTTATTTAGAACGTTTGAGAATTGGAAAGGGAATGTAGGTTAATTGGGAATCTAAATTAATAAATATTGTATATTTTATTAATATTTTCTTTCCTTAGTTGCTTCCAGGAATCGTTTCTTATGAAAATTTTTATAAATGTATATGATTTTGGTAAGTTTATATGAAATGAAAATTGTATATAATTTTGGTAATCATTGTGCGAAACAGACGGGATACAGATTAATTTTATATTTCAGCATTTTGTCTCAAGTTTTGTAATTTTTTATTTATAGTAATTATAATATAAATTTTCCTACATTTGACTTTATTTTTCTGATATTTTCTAATTGTTCGTGAATACGTCAATCATGTTCTCTATGTCAATATTTTATTTCTGTTTCTAGTCTATTATTGTGACTTAGTTGGCTATCTTATCCTATAGACGTGACGAAATTTTCTTTAAACACTAAACTAAAAATGGATATGTTATAATTCGATATATATGGACCATGCTTTGAAATTGAAATATACAGTAGTTTTTTGACAAAGAAAATTGATATATAGTTAGTTAAGGTATATTGGTCGTCACATCATAGACTCAACCGTAAATCTATCCTTTTCGTAGAGAGAAAAAGGGGAACATATAGGTATCACTTTAGAACTAGAACTAGTTTGCAAAACAATCTTCTTAAATTCTTGGAACTGAAGTAAAGTAGTTTCATGTTGACTAATGAGATAAAACAAAAAGTTACATTTTATATATTAGACTATGCATTATTAACAACTATATTGTATTTTTTTTGAAGGAAACTATATTGTATTTTGAATTTCAAATTCACTTAGTGTTAATCATAACGATAAATATATTTTGAATTTGAAGTTTATATTGTTTGTTGGGAAGTCTCAATCATGTATATTTAGCCTGATTTCTAAGTTACTTCATGTTGCGGCAATATGTTTACTAGTCACATGTGCACAAATTTGTTGTATCACTGGAAATTTCAAAGTAAAAGTACTTTTTAATCAGCTTAAGTTACAAATATTTTAATTGGTTAATGACATGTTGTTACAATTGAATTAATCAGGTTGCAAGTTGGGGAGCATATCTTTTGCCACGTGACATATTAGCAGTGTCATTTGCACCAAGAGATACACATGAAGCTCAAGTTCAATTTGCTCTTGAACGAGGAGTTCCAGCTTTGATTGGTGTCATTGCCACAATTAGGCTTCCTTACCCTTCAAGAGCCTTTGACATGGCTCATTGCTCACGTTGCCTAATTCCTTGGGGCCAGAATGGTAAATATATCCTTTGGTGTCTAACATGTGTCAGGGTCTAACATGTGTCATGGCACTTGTGTTGTGTTCGGTGCCAGACACATTTTAATTTGAAAGCAAGTGTGTGTGAATATGTGACTTATAAATTTTGTTTTATGTATTTGTAGATGGAATTTATTTAACTGAAGTTGATAGAGTGCTACGTCCTGGAGGGTATTGGATTCTATCAGGGCCACCAATAAATTGGGAGAGCCATTGGAAAGGGTGGGAGAGGACTCGTGAGGATCTAAATGCTGAACAGACTTCAATTGAGAGAGTGGCAAAAAGTCTCTGTTGGAAAAAACTAGTTCAGAAGGGTGACATTGCAATATGGCAAAAGCCTACTAATCATATTCATTGCAAAATAACAAGAAAGGTCTTCAAGAATAGACCCTTTTGTGATGCAAAGGATCCTGACTCAGCATGGTAATGTACCTTTTCCTATTCTTTTAATTATTAATTAATGCCTTTTAAGATATTGAATTGTGACCACAGTCCCATTTGAGATCACAATCACATCGTGATCGTTAAGATTGCGGAGAATTGTGGTCAAATAAGACTCATATGGACCAAAAAAACTGATGTCACGGTCACGGATTTTTTTATAAGTCACTCATAACTTTATTGATAATTTTCAGATAATGTCGCATTGACTCACTTATAGTTCCTTGTGCTACTGATTTTGCTTTTGCAGTAATAAAAAAAAAGTAAATTATGCTTGCTGCCAAATAGAGTTTGGCAGTGATACCAAAACCACTTAGATGATAAAGAATTTGAGCTGCATGATCTATTTCTTTGTTAGTTGTTTTATACACCTTTTCAAAAGTGGAGATTCTTTTTGGACCATTCCAAAAAAAATAATTTATTTGTTTGCTTTATTCCCCTTTTCTCTTTAGTTACTTGTTCTTGAAGTTTTAAATTTTCTTTTCTTCATTTTAGGTACACCAAAATGGATACATGTTTGACACCACTTCCTGAGGTATCTGACATAAAAGAAGTTAGTGGTGGAGGATTGTCGAATTGGCCTGAGAGACTAACATCAGTTCCACCAAGGATTAGCAGTGGAAGTTTGGATGGAATCACAGCTGAGATGTTCAAAGAAAATACCGAGTTATGGAAGAAGAGAGTTGCATACTACAAGACACTTGATTATCAGCTAGCAGAGCCGGGGAGATACCGTAATTTACTTGATATGAATGCTTACATGGGAGGATTTGCAGCTGCAATGATTGATGATCCAGTTTGGGTCATGAATATTGTTCCAGTCCAGGCTGAGATCAACACACTTGGTGTCGTTTATGAACGCGGATTGATCGGAACATATCAGAACTGGTAAGTCTTTATTCCCTTTCTAATAGCCATTCCTAACCAACCAATTTTAAAGAAAGGTAAATATGTGATAACTTTTGAACTCATTTTGAGTTTTTAAGAGAGTTGTATTGTTAGAGTGAAAAATTGTTTAAGTTCTTTATTAGAGATGCTATTTGAGGTGAGAAACTGATTACAAAAAATGAGAGAGGTTTGCTAAAGGAAACAAAATGTTGATTAGCTTAGTAGAAAGTAGCTTTTTGATAGCATAATTAGATTTGCAGCATACTCTTTCAATAAGTGAGTAGTATATTATATGTAACGTACATAAGTGTTGTATCCACCAATAATTAAATTTAAAGTGCATCCTTATCTTAGCTCACTAAAATTTAGAGTTGGATAACTTTATAATTGTGCACTTTTGGAGGCAAAACTTACTTTATGTTAATCTTTTTCTATTACTTCCCACTTATAGTATAGCTTTATTGTGAAGATAATTTAATTGCAAATTATCTCTTCAGATCTATGAGTGCTACCTAATTTTGTCCTTTACAATAGACAGAAAATTGTGAATCAGATTTTGTGCTGCTTTACACATTTCATCACATGGTAGTAGTTAATGTTTCATTAATAAACTGCTTTTTGTCTCCACTCAGGTGTGAAGCCATGTCCACTTATCCTCGAACCTATGACTTTATACATGCTGATTCTCTTTTTACCCTCTATGAGGACAGGTAAATTGTAAAATTGGTTTTGCCAAATTCAGAAATAACTATTTAAATTGTGACTATGTATATAAAATATGTTTACCACTCATATAATAACTTTGTGAAATTATTTAATGTGTGACAGATGTAATATAGAGGACATTCTTCTTGAGATGGATAGGATATTGAGGCCACAAGGGAGTGTGATATTGCGTGATGATGTGGATGTGTTGTTGAAGGTAAAAAGATTTGCAGATGCAATGCAATGGGATGCTAGAATTGCAGACCATGAAAAGGGACCACACCAAAGAGAAAAGATACTTGTAGCAGTCAAGCAGTATTGGACATCCCCACAACCTGAACAAAATCAACAAAGAAAGTTATAA
Protein sequence

>MS.gene42232.t1

MANSFLSIFNKKPNKPLSRLYFLTFTIILCTFFYLLGLWQNSSTTTTSAAISGNNHHSTTIIRPDCPQTNFTSTTTSSITLDFSAHHNVPDPPESAARVTNAPVCDVGLSEYTPCEDVQRSLKFPRENLIYRERHCPEKEEILRCRIPAPYGYRIPPRWPESRDWAWYANVPHKELTIEKKNQNWVHFEGDRFRFPGGGTMFPRGAGAYIDDIGKLINLKDGSVRTALDTGCGVASWGAYLLPRDILAVSFAPRDTHEAQVQFALERGVPALIGVIATIRLPYPSRAFDMAHCSRCLIPWGQNDGIYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTREDLNAEQTSIERVAKSLCWKKLVQKGDIAIWQKPTNHIHCKITRKVFKNRPFCDAKDPDSAWYTKMDTCLTPLPEVSDIKEVSGGGLSNWPERLTSVPPRISSGSLDGITAEMFKENTELWKKRVAYYKTLDYQLAEPGRYRNLLDMNAYMGGFAAAMIDDPVWVMNIVPVQAEINTLGVVYERGLIGTYQNWCEAMSTYPRTYDFIHADSLFTLYEDRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFADAMQWDARIADHEKGPHQREKILVAVKQYWTSPQPEQNQQRKL