AlfalfaGEDB | MS.gene42900

M. sativa cultivar XinJiangDaYe / MS.gene42900

KEGG: K14270
GO: GO:0003674 GO:0003824 GO:0005488 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0019842 GO:0030170 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050662 GO:0070279 GO:0097159 GO:1901363
PFAM: PF00155.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42900.t1	XP_013452470.1	98.5	333	5	0	1	333	200	532	2.20E-189	671.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42900.t1	Q8GYY0	63.4	331	121	0	1	331	165	495	1.8e-128	460.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42900.t1	A0A072UBT9	98.5	333	5	0	1	333	200	532	1.6e-189	671.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050625	MS.gene42900	0.810942	8.97E-51	-1.69E-46
MS.gene051360	MS.gene42900	0.805588	1.24E-49	-1.69E-46
MS.gene052982	MS.gene42900	0.827364	1.63E-54	-1.69E-46
MS.gene053318	MS.gene42900	0.821866	3.21E-53	-1.69E-46
MS.gene055892	MS.gene42900	0.968317	1.66E-128	-1.69E-46
MS.gene055893	MS.gene42900	0.99103	1.55E-185	-1.69E-46
MS.gene055894	MS.gene42900	0.936535	1.49E-97	-1.69E-46
MS.gene055895	MS.gene42900	0.895987	5.68E-76	-1.69E-46
MS.gene057289	MS.gene42900	0.800372	1.49E-48	-1.69E-46
MS.gene059946	MS.gene42900	0.809826	1.56E-50	-1.69E-46
MS.gene060837	MS.gene42900	0.810268	1.25E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene42900	MS.gene048867	PPI
MS.gene89714	MS.gene42900	PPI
MS.gene06009	MS.gene42900	PPI
MS.gene42900	MS.gene55742	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42900.t1	MTR_6g463260	98.498	333	5	0	1	333	200	532	0.0	689
MS.gene42900.t1	MTR_5g011400	60.671	328	129	0	1	328	167	494	3.92e-155	444
MS.gene42900.t1	MTR_8g101750	48.457	324	166	1	1	323	100	423	1.30e-123	362
MS.gene42900.t1	MTR_6g091760	48.765	324	165	1	1	323	108	431	1.16e-122	360
MS.gene42900.t1	MTR_4g097540	46.802	344	172	4	1	333	99	442	1.13e-121	358
MS.gene42900.t1	MTR_3g103550	47.748	333	168	2	1	328	98	429	3.98e-117	347
MS.gene42900.t1	MTR_5g015020	45.373	335	174	4	1	326	99	433	7.72e-117	346
MS.gene42900.t1	MTR_8g098930	44.377	329	180	1	1	326	107	435	6.04e-111	331
MS.gene42900.t1	MTR_8g101820	43.731	327	170	3	1	326	100	413	2.63e-107	320
MS.gene42900.t1	MTR_8g028600	42.331	326	188	0	1	326	106	431	5.55e-104	313
MS.gene42900.t1	MTR_7g079080	42.202	327	188	1	1	326	1	327	2.69e-102	305
MS.gene42900.t1	MTR_7g079080	42.202	327	188	1	1	326	106	432	1.16e-100	305
MS.gene42900.t1	MTR_5g033230	25.215	349	211	12	12	324	129	463	4.67e-20	90.9
MS.gene42900.t1	MTR_5g033230	26.429	280	164	9	12	262	129	395	6.33e-18	84.7
MS.gene42900.t1	MTR_8g023140	21.386	332	236	11	14	322	182	511	1.21e-14	75.1
MS.gene42900.t1	MTR_2g090615	29.670	182	102	5	10	184	105	267	1.01e-12	68.9
MS.gene42900.t1	MTR_7g106830	21.006	338	235	12	9	333	153	471	1.53e-12	68.6
MS.gene42900.t1	MTR_8g091280	21.429	294	212	8	9	294	155	437	2.28e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene42900.t1	AT5G51690	63.444	331	121	0	1	331	42	372	1.31e-166	469
MS.gene42900.t1	AT5G51690	63.444	331	121	0	1	331	165	495	5.29e-164	467
MS.gene42900.t1	AT1G62960	58.209	335	138	2	1	333	223	557	1.68e-150	435
MS.gene42900.t1	AT4G37770	48.640	331	166	1	1	327	99	429	2.93e-122	360
MS.gene42900.t1	AT2G22810	47.478	337	172	2	1	332	99	435	9.43e-120	353
MS.gene42900.t1	AT3G49700	48.358	335	169	1	1	331	99	433	8.34e-118	348
MS.gene42900.t1	AT5G65800	46.687	332	173	1	1	328	99	430	2.81e-115	342
MS.gene42900.t1	AT4G26200	47.734	331	167	2	1	327	114	442	4.08e-115	340
MS.gene42900.t1	AT4G08040	44.985	329	180	1	1	328	97	425	9.54e-113	335
MS.gene42900.t1	AT4G11280	45.062	324	177	1	1	323	110	433	1.77e-110	330
MS.gene42900.t1	AT1G01480	42.090	335	190	2	1	331	1	335	3.00e-103	308
MS.gene42900.t1	AT1G01480	42.090	335	190	2	1	331	107	441	1.53e-101	308
MS.gene42900.t1	AT3G61510	41.284	327	188	2	1	326	106	429	2.53e-101	307
MS.gene42900.t1	AT1G70580	26.176	340	219	14	12	324	129	463	3.42e-20	91.7
MS.gene42900.t1	AT1G70580	26.176	340	219	14	12	324	129	463	3.42e-20	91.7
MS.gene42900.t1	AT1G70580	26.176	340	219	14	12	324	129	463	3.42e-20	91.7
MS.gene42900.t1	AT1G70580	26.176	340	219	14	12	324	129	463	3.42e-20	91.7
MS.gene42900.t1	AT1G23310	25.294	340	222	13	12	324	129	463	4.05e-20	91.3
MS.gene42900.t1	AT1G72330	22.000	350	228	12	12	328	196	533	8.93e-19	87.4
MS.gene42900.t1	AT1G23310	32.168	143	94	3	12	152	129	270	9.06e-19	87.0
MS.gene42900.t1	AT1G72330	28.402	169	108	5	12	178	196	353	5.23e-18	84.7
MS.gene42900.t1	AT1G72330	21.488	363	227	12	12	328	196	546	1.82e-17	83.6
MS.gene42900.t1	AT1G17290	21.512	344	225	11	12	322	199	530	8.95e-17	81.6
MS.gene42900.t1	AT5G36160	29.444	180	101	5	8	180	102	262	1.46e-13	71.6
MS.gene42900.t1	AT2G22250	20.588	340	232	12	9	332	108	425	3.17e-12	67.4
MS.gene42900.t1	AT2G22250	20.588	340	232	12	9	332	155	472	4.15e-12	67.4
MS.gene42900.t1	AT2G22250	20.588	340	232	12	9	332	155	472	4.15e-12	67.4
MS.gene42900.t1	AT2G24850	22.876	306	208	8	15	309	116	404	2.84e-11	64.7

Find 74 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAGACTGAAAAGCATTTC+TGG	0.240255	6.2:-64295644	None:intergenic
AGAAAGGAGAACTTGAATTA+TGG	0.243969	6.2:+64296122	MS.gene42900:CDS
TTCACACAACAAAACTGTTT+TGG	0.255365	6.2:+64295859	MS.gene42900:CDS
TCAAAAGACCTTTCGATTGC+TGG	0.288659	6.2:+64295815	MS.gene42900:CDS
AGCACACTTGATTCCTAGTT+TGG	0.291076	6.2:-64296038	None:intergenic
TTCCGATAAACGATTCATTC+AGG	0.315188	6.2:+64295952	MS.gene42900:CDS
GTCGATTACCCTGGATAATA+AGG	0.320746	6.2:-64295188	None:intergenic
AGAATTTGACCCGTCAAATA+TGG	0.338798	6.2:+64295082	MS.gene42900:CDS
TTCCTGAATGAATCGTTTAT+CGG	0.368687	6.2:-64295954	None:intergenic
GAAAGGAGAACTTGAATTAT+GGG	0.372458	6.2:+64296123	MS.gene42900:CDS
AACGATAGTATCTCAATTGC+AGG	0.378929	6.2:-64295125	None:intergenic
AGTTCTCCTTTCTCGCTATA+AGG	0.388101	6.2:-64296112	None:intergenic
GCACCCGTCTTATTCTATTT+CGG	0.391124	6.2:-64295991	None:intergenic
AAATCCCTCTAGTTATTGAT+AGG	0.392176	6.2:+64296251	MS.gene42900:CDS
CTCTAGTTATTGATAGGATT+CGG	0.409149	6.2:+64296257	MS.gene42900:CDS
CTTGACTAAATGCTTGTTCA+AGG	0.411999	6.2:-64295547	None:intergenic
GTCCCTACACCTTATTATCC+AGG	0.416731	6.2:+64295179	MS.gene42900:CDS
ATTGCTGACGAAGTATTTGC+AGG	0.422387	6.2:+64295698	MS.gene42900:CDS
AGTGATTATGCAGCTTTGAC+AGG	0.425900	6.2:+64295444	MS.gene42900:intron
ATCAGACCTTATAGCGAGAA+AGG	0.438192	6.2:+64296106	MS.gene42900:CDS
GCAGCGCCGGTATGTTCTGT+TGG	0.448478	6.2:+64296065	MS.gene42900:CDS
CAGCGCCGGTATGTTCTGTT+GGG	0.459303	6.2:+64296066	MS.gene42900:CDS
ATGCAATGGCAAGCCGATCC+AGG	0.473529	6.2:-64296181	None:intergenic
GCTAAGATAAATATAACTCC+TGG	0.479435	6.2:+64296163	MS.gene42900:CDS
CCGTCTTATTCTATTTCGGT+TGG	0.485045	6.2:-64295987	None:intergenic
GGTGTCAGAATATTGCCAAC+AGG	0.485404	6.2:-64295623	None:intergenic
TCAGTACTTCGACAGTGAAC+AGG	0.488659	6.2:-64295500	None:intergenic
ATATTGCCAACAGGATTTGA+AGG	0.489937	6.2:-64295614	None:intergenic
ACGGGTGCACAATGAGTTTG+TGG	0.494025	6.2:+64296006	MS.gene42900:CDS
AGGGACGTAAGATGGCGTCC+AGG	0.510730	6.2:+64295464	MS.gene42900:CDS
GATGTTAGTACCATATTTGA+CGG	0.511266	6.2:-64295092	None:intergenic
TCAAATATGGTACTAACATC+GGG	0.513697	6.2:+64295095	MS.gene42900:CDS
TGAGATACTATCGTTCTGCT+TGG	0.519831	6.2:+64295133	MS.gene42900:CDS
GTGGATTGTTTAACCAAACT+AGG	0.523731	6.2:+64296025	MS.gene42900:CDS
GTATTTGCAGGCTCCACGTA+CGG	0.524369	6.2:+64295710	MS.gene42900:CDS
GCTTTGACAGGGACGTAAGA+TGG	0.539978	6.2:+64295456	MS.gene42900:intron
GATAAATATAACTCCTGGAT+CGG	0.540003	6.2:+64296168	MS.gene42900:CDS
TCGATTGCTGGATTTAGAGT+CGG	0.540691	6.2:+64295827	MS.gene42900:CDS
ACCATCCTGGTTCTATGCAA+TGG	0.546338	6.2:-64296195	None:intergenic
GATAATAAGGTGTAGGGACA+AGG	0.549163	6.2:-64295175	None:intergenic
CTCTAAATCCAGCAATCGAA+AGG	0.554066	6.2:-64295823	None:intergenic
TATTGCCAACAGGATTTGAA+GGG	0.556392	6.2:-64295613	None:intergenic
GTCAAATATGGTACTAACAT+CGG	0.563753	6.2:+64295094	MS.gene42900:CDS
ACAGGTATTAAGTCTATCCC+TGG	0.566102	6.2:-64295482	None:intergenic
TCCCTACACCTTATTATCCA+GGG	0.567075	6.2:+64295180	MS.gene42900:CDS
AAGTGTGCTAAGAGCAGCGC+CGG	0.573828	6.2:+64296052	MS.gene42900:CDS
GAAGTAACTAACCTCTGTGT+TGG	0.575820	6.2:-64295923	None:intergenic
GCCATTGCATAGAACCAGGA+TGG	0.576139	6.2:+64296194	MS.gene42900:CDS
ATATTCTGAATCGAGAACTT+CGG	0.576552	6.2:-64295756	None:intergenic
TTCTGTTGGGCTGATATGAG+TGG	0.577234	6.2:+64296079	MS.gene42900:CDS
GTGATTATGCAGCTTTGACA+GGG	0.578099	6.2:+64295445	MS.gene42900:intron
ATGTTAGTACCATATTTGAC+GGG	0.579929	6.2:-64295091	None:intergenic
AAACTCCTCGCTTCCGTACG+TGG	0.582162	6.2:-64295723	None:intergenic
ACCCTGGATAATAAGGTGTA+GGG	0.583042	6.2:-64295181	None:intergenic
CGAATCCTATCAATAACTAG+AGG	0.584201	6.2:-64296256	None:intergenic
TCGTTCTGCTTGGCAGACCA+TGG	0.585867	6.2:+64295143	MS.gene42900:CDS
AGCCGCGTTCATATAGTGTA+CGG	0.586505	6.2:+64295788	MS.gene42900:CDS
AAACGAGGAGTCAAAGTTCG+CGG	0.587306	6.2:+64295575	MS.gene42900:CDS
TACCCTGGATAATAAGGTGT+AGG	0.592046	6.2:-64295182	None:intergenic
CAACCGAAATAGAATAAGAC+GGG	0.592241	6.2:+64295988	MS.gene42900:CDS
AAACAAATACGAAACCATCC+TGG	0.595378	6.2:-64296208	None:intergenic
GGGACGTAAGATGGCGTCCA+GGG	0.596829	6.2:+64295465	MS.gene42900:CDS
TTGACTAAATGCTTGTTCAA+GGG	0.597175	6.2:-64295546	None:intergenic
TCGAACCCTTCAAATCCTGT+TGG	0.599882	6.2:+64295608	MS.gene42900:CDS
GGACAAGGAATGCATTTCCA+TGG	0.601989	6.2:-64295160	None:intergenic
GCTTGCCATTGCATAGAACC+AGG	0.608825	6.2:+64296190	MS.gene42900:CDS
TTTATGCATCAGGTTATGGG+AGG	0.621158	6.2:+64295053	None:intergenic
AGGCTCCACGTACGGAAGCG+AGG	0.623216	6.2:+64295718	MS.gene42900:CDS
CCAACCGAAATAGAATAAGA+CGG	0.633080	6.2:+64295987	MS.gene42900:CDS
ATCAGCCCAACAGAACATAC+CGG	0.634233	6.2:-64296071	None:intergenic
GAATCCTATCAATAACTAGA+GGG	0.646614	6.2:-64296255	None:intergenic
TTTAGTCAAGCAAGAAAACG+AGG	0.661177	6.2:+64295560	MS.gene42900:CDS
GGCCGTACACTATATGAACG+CGG	0.742883	6.2:-64295790	None:intergenic
CTATATCTGCACCAACACAG+AGG	0.756871	6.2:+64295912	MS.gene42900:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGTATAAAAACTATTTATA+AGG	+	chr6.2:64295342-64295361	MS.gene42900:intron	10.0%
!!!	TAAACTATTGATTCCTATTT+GGG	+	chr6.2:64295221-64295240	MS.gene42900:intron	20.0%
!!!	TTAAACTATTGATTCCTATT+TGG	+	chr6.2:64295220-64295239	MS.gene42900:intron	20.0%
!	AGATCAAATAAAACCCAAAT+AGG	-	chr6.2:64295237-64295256	None:intergenic	25.0%
!	CATTTCTCTTAAAAGAAGTT+AGG	+	chr6.2:64295270-64295289	MS.gene42900:intron	25.0%
!!!	TGAAAATCTGCTCATTTTTT+TGG	-	chr6.2:64295891-64295910	None:intergenic	25.0%
	AAATCCCTCTAGTTATTGAT+AGG	+	chr6.2:64296251-64296270	MS.gene42900:CDS	30.0%
	AGAAAGGAGAACTTGAATTA+TGG	+	chr6.2:64296122-64296141	MS.gene42900:CDS	30.0%
	ATATTCTGAATCGAGAACTT+CGG	-	chr6.2:64295759-64295778	None:intergenic	30.0%
	ATGTTAGTACCATATTTGAC+GGG	-	chr6.2:64295094-64295113	None:intergenic	30.0%
	CTCTAGTTATTGATAGGATT+CGG	+	chr6.2:64296257-64296276	MS.gene42900:CDS	30.0%
	GAAAGGAGAACTTGAATTAT+GGG	+	chr6.2:64296123-64296142	MS.gene42900:CDS	30.0%
	GAATCCTATCAATAACTAGA+GGG	-	chr6.2:64296258-64296277	None:intergenic	30.0%
	GATAAATATAACTCCTGGAT+CGG	+	chr6.2:64296168-64296187	MS.gene42900:CDS	30.0%
	GATGTTAGTACCATATTTGA+CGG	-	chr6.2:64295095-64295114	None:intergenic	30.0%
	GCTAAGATAAATATAACTCC+TGG	+	chr6.2:64296163-64296182	MS.gene42900:CDS	30.0%
	GTCAAATATGGTACTAACAT+CGG	+	chr6.2:64295094-64295113	MS.gene42900:CDS	30.0%
	TCAAATATGGTACTAACATC+GGG	+	chr6.2:64295095-64295114	MS.gene42900:CDS	30.0%
	TTCCTGAATGAATCGTTTAT+CGG	-	chr6.2:64295957-64295976	None:intergenic	30.0%
	TTGACTAAATGCTTGTTCAA+GGG	-	chr6.2:64295549-64295568	None:intergenic	30.0%
!	TTCACACAACAAAACTGTTT+TGG	+	chr6.2:64295859-64295878	MS.gene42900:CDS	30.0%
!	TTTTACAACTATATCGTTCG+AGG	+	chr6.2:64296228-64296247	MS.gene42900:CDS	30.0%
	AAACAAATACGAAACCATCC+TGG	-	chr6.2:64296211-64296230	None:intergenic	35.0%
	AACGATAGTATCTCAATTGC+AGG	-	chr6.2:64295128-64295147	None:intergenic	35.0%
	AGAATTTGACCCGTCAAATA+TGG	+	chr6.2:64295082-64295101	MS.gene42900:CDS	35.0%
	ATATTGCCAACAGGATTTGA+AGG	-	chr6.2:64295617-64295636	None:intergenic	35.0%
	CAACCGAAATAGAATAAGAC+GGG	+	chr6.2:64295988-64296007	MS.gene42900:CDS	35.0%
	CCAACCGAAATAGAATAAGA+CGG	+	chr6.2:64295987-64296006	MS.gene42900:CDS	35.0%
	CGAATCCTATCAATAACTAG+AGG	-	chr6.2:64296259-64296278	None:intergenic	35.0%
	CTTGACTAAATGCTTGTTCA+AGG	-	chr6.2:64295550-64295569	None:intergenic	35.0%
	TATTGCCAACAGGATTTGAA+GGG	-	chr6.2:64295616-64295635	None:intergenic	35.0%
	TTATTATCCAGGGTAATCGA+CGG	+	chr6.2:64295190-64295209	MS.gene42900:intron	35.0%
	TTCCGATAAACGATTCATTC+AGG	+	chr6.2:64295952-64295971	MS.gene42900:CDS	35.0%
	TTTAGTCAAGCAAGAAAACG+AGG	+	chr6.2:64295560-64295579	MS.gene42900:CDS	35.0%
!	CAATCGAAAGGTCTTTTGAT+AGG	-	chr6.2:64295814-64295833	None:intergenic	35.0%
!	GTGGATTGTTTAACCAAACT+AGG	+	chr6.2:64296025-64296044	MS.gene42900:CDS	35.0%
!!	AGAAGACTGAAAAGCATTTC+TGG	-	chr6.2:64295647-64295666	None:intergenic	35.0%
	ACAGGTATTAAGTCTATCCC+TGG	-	chr6.2:64295485-64295504	None:intergenic	40.0%
	ACCCTGGATAATAAGGTGTA+GGG	-	chr6.2:64295184-64295203	None:intergenic	40.0%
	AGCACACTTGATTCCTAGTT+TGG	-	chr6.2:64296041-64296060	None:intergenic	40.0%
	AGTTCTCCTTTCTCGCTATA+AGG	-	chr6.2:64296115-64296134	None:intergenic	40.0%
	ATCAGACCTTATAGCGAGAA+AGG	+	chr6.2:64296106-64296125	MS.gene42900:CDS	40.0%
	CTCTAAATCCAGCAATCGAA+AGG	-	chr6.2:64295826-64295845	None:intergenic	40.0%
	GAAGTAACTAACCTCTGTGT+TGG	-	chr6.2:64295926-64295945	None:intergenic	40.0%
	GATAATAAGGTGTAGGGACA+AGG	-	chr6.2:64295178-64295197	None:intergenic	40.0%
	GTCGATTACCCTGGATAATA+AGG	-	chr6.2:64295191-64295210	None:intergenic	40.0%
	TACCCTGGATAATAAGGTGT+AGG	-	chr6.2:64295185-64295204	None:intergenic	40.0%
	TCAAAAGACCTTTCGATTGC+TGG	+	chr6.2:64295815-64295834	MS.gene42900:CDS	40.0%
	TCCCTACACCTTATTATCCA+GGG	+	chr6.2:64295180-64295199	MS.gene42900:CDS	40.0%
	TGAGATACTATCGTTCTGCT+TGG	+	chr6.2:64295133-64295152	MS.gene42900:CDS	40.0%
!	AGTGATTATGCAGCTTTGAC+AGG	+	chr6.2:64295444-64295463	MS.gene42900:intron	40.0%
!	ATTGCTGACGAAGTATTTGC+AGG	+	chr6.2:64295698-64295717	MS.gene42900:CDS	40.0%
!	CCGTCTTATTCTATTTCGGT+TGG	-	chr6.2:64295990-64296009	None:intergenic	40.0%
!	GCACCCGTCTTATTCTATTT+CGG	-	chr6.2:64295994-64296013	None:intergenic	40.0%
!	GTGATTATGCAGCTTTGACA+GGG	+	chr6.2:64295445-64295464	MS.gene42900:intron	40.0%
!	TCGATTGCTGGATTTAGAGT+CGG	+	chr6.2:64295827-64295846	MS.gene42900:CDS	40.0%
	AAACGAGGAGTCAAAGTTCG+CGG	+	chr6.2:64295575-64295594	MS.gene42900:CDS	45.0%
	AGCCGCGTTCATATAGTGTA+CGG	+	chr6.2:64295788-64295807	MS.gene42900:CDS	45.0%
	ATCAGCCCAACAGAACATAC+CGG	-	chr6.2:64296074-64296093	None:intergenic	45.0%
	CTATATCTGCACCAACACAG+AGG	+	chr6.2:64295912-64295931	MS.gene42900:CDS	45.0%
	GGACAAGGAATGCATTTCCA+TGG	-	chr6.2:64295163-64295182	None:intergenic	45.0%
	GGTGTCAGAATATTGCCAAC+AGG	-	chr6.2:64295626-64295645	None:intergenic	45.0%
	GTCCCTACACCTTATTATCC+AGG	+	chr6.2:64295179-64295198	MS.gene42900:CDS	45.0%
	TCAGTACTTCGACAGTGAAC+AGG	-	chr6.2:64295503-64295522	None:intergenic	45.0%
	TCGAACCCTTCAAATCCTGT+TGG	+	chr6.2:64295608-64295627	MS.gene42900:CDS	45.0%
	TTCTGTTGGGCTGATATGAG+TGG	+	chr6.2:64296079-64296098	MS.gene42900:CDS	45.0%
!!	ACCATCCTGGTTCTATGCAA+TGG	-	chr6.2:64296198-64296217	None:intergenic	45.0%
!!	TAAAAATATCTTAATTAAAA+AGG	+	chr6.2:64295307-64295326	MS.gene42900:intron	5.0%
	ACGGGTGCACAATGAGTTTG+TGG	+	chr6.2:64296006-64296025	MS.gene42900:CDS	50.0%
	GCCATTGCATAGAACCAGGA+TGG	+	chr6.2:64296194-64296213	MS.gene42900:CDS	50.0%
	GCTTGCCATTGCATAGAACC+AGG	+	chr6.2:64296190-64296209	MS.gene42900:CDS	50.0%
	GCTTTGACAGGGACGTAAGA+TGG	+	chr6.2:64295456-64295475	MS.gene42900:intron	50.0%
	GGCCGTACACTATATGAACG+CGG	-	chr6.2:64295793-64295812	None:intergenic	50.0%
	GTATTTGCAGGCTCCACGTA+CGG	+	chr6.2:64295710-64295729	MS.gene42900:CDS	50.0%
	AAACTCCTCGCTTCCGTACG+TGG	-	chr6.2:64295726-64295745	None:intergenic	55.0%
	AAGTGTGCTAAGAGCAGCGC+CGG	+	chr6.2:64296052-64296071	MS.gene42900:CDS	55.0%
	ATGCAATGGCAAGCCGATCC+AGG	-	chr6.2:64296184-64296203	None:intergenic	55.0%
	TCGTTCTGCTTGGCAGACCA+TGG	+	chr6.2:64295143-64295162	MS.gene42900:CDS	55.0%
!!	CAGCGCCGGTATGTTCTGTT+GGG	+	chr6.2:64296066-64296085	MS.gene42900:CDS	55.0%
!!	GAAAGTGCCGTCGATTACCC+TGG	-	chr6.2:64295200-64295219	None:intergenic	55.0%
	AGGGACGTAAGATGGCGTCC+AGG	+	chr6.2:64295464-64295483	MS.gene42900:CDS	60.0%
	GGGACGTAAGATGGCGTCCA+GGG	+	chr6.2:64295465-64295484	MS.gene42900:CDS	60.0%
!!	GCAGCGCCGGTATGTTCTGT+TGG	+	chr6.2:64296065-64296084	MS.gene42900:CDS	60.0%
	AGGCTCCACGTACGGAAGCG+AGG	+	chr6.2:64295718-64295737	MS.gene42900:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	64295056	64296312	64295056	ID=MS.gene42900
chr6.2	mRNA	64295056	64296312	64295056	ID=MS.gene42900.t1;Parent=MS.gene42900
chr6.2	exon	64295056	64295201	64295056	ID=MS.gene42900.t1.exon1;Parent=MS.gene42900.t1
chr6.2	CDS	64295056	64295201	64295056	ID=cds.MS.gene42900.t1;Parent=MS.gene42900.t1
chr6.2	exon	64295457	64296312	64295457	ID=MS.gene42900.t1.exon2;Parent=MS.gene42900.t1
chr6.2	CDS	64295457	64296312	64295457	ID=cds.MS.gene42900.t1;Parent=MS.gene42900.t1

Gene Sequence

>MS.gene42900

ATGCATCAGGTTATGGGAGGATCAGTAGAATTTGACCCGTCAAATATGGTACTAACATCGGGAGCAACTCCTGCAATTGAGATACTATCGTTCTGCTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCTTATTATCCAGGGTAATCGACGGCACTTTCTTAAACTATTGATTCCTATTTGGGTTTTATTTGATCTGACTTGTTTTTGTCATTTCTCTTAAAAGAAGTTAGGCTAAACAATATTTTTAAAAATATCTTAATTAAAAAGGAGATTATCTTTTATGTATAAAAACTATTTATAAGGAGTTTTTTTAAATCTATTTTTTTATTATTTAACTCAAATTCTATCGTTCTATAAAAAAAATTTAAAAGCTAATTAAAAAAGTGATTATGCAGCTTTGACAGGGACGTAAGATGGCGTCCAGGGATAGACTTAATACCTGTTCACTGTCGAAGTACTGACAATTTCAATCTAAACATCACTGCCCTTGAACAAGCATTTAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGCGGAATTCTCATCTCGAACCCTTCAAATCCTGTTGGCAATATTCTGACACCAGAAATGCTTTTCAGTCTTCTAGACTTTGCTGAAGATAAAAACATTCATATCATTGCTGACGAAGTATTTGCAGGCTCCACGTACGGAAGCGAGGAGTTTGTGAGTATAGCCGAAGTTCTCGATTCAGAATATATAGATAAAAGCCGCGTTCATATAGTGTACGGCCTATCAAAAGACCTTTCGATTGCTGGATTTAGAGTCGGAGTTATACATTCACACAACAAAACTGTTTTGGATGCTGCCAAAAAAATGAGCAGATTTTCATCTATATCTGCACCAACACAGAGGTTAGTTACTTCAATGCTTTCCGATAAACGATTCATTCAGGAATACATTGAAACCAACCGAAATAGAATAAGACGGGTGCACAATGAGTTTGTGGATTGTTTAACCAAACTAGGAATCAAGTGTGCTAAGAGCAGCGCCGGTATGTTCTGTTGGGCTGATATGAGTGGTTTAATCAGACCTTATAGCGAGAAAGGAGAACTTGAATTATGGGAGAAGTTTATGAGTGTTGCTAAGATAAATATAACTCCTGGATCGGCTTGCCATTGCATAGAACCAGGATGGTTTCGTATTTGTTTTACAACTATATCGTTCGAGGAAATCCCTCTAGTTATTGATAGGATTCGGAAAGTTGTTGAAAGTTGTAAATCTTCCAATTGA

Protein sequence

>MS.gene42900.t1

MHQVMGGSVEFDPSNMVLTSGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGIDLIPVHCRSTDNFNLNITALEQAFSQARKRGVKVRGILISNPSNPVGNILTPEMLFSLLDFAEDKNIHIIADEVFAGSTYGSEEFVSIAEVLDSEYIDKSRVHIVYGLSKDLSIAGFRVGVIHSHNKTVLDAAKKMSRFSSISAPTQRLVTSMLSDKRFIQEYIETNRNRIRRVHNEFVDCLTKLGIKCAKSSAGMFCWADMSGLIRPYSEKGELELWEKFMSVAKINITPGSACHCIEPGWFRICFTTISFEEIPLVIDRIRKVVESCKSSN