AlfalfaGEDB | MS.gene055893

M. sativa cultivar XinJiangDaYe / MS.gene055893

KEGG: K14270
GO: GO:0003674 GO:0003824 GO:0005488 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0019842 GO:0030170 GO:0036094 GO:0043167 GO:0043168 GO:0048037 GO:0050662 GO:0070279 GO:0097159 GO:1901363
PFAM: PF00155.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055893.t1	XP_013452470.1	98.8	328	4	0	1	328	200	527	1.70E-186	661.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055893.t1	Q8GYY0	63.7	328	119	0	1	328	165	492	6.9e-128	458.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055893.t1	A0A072UBT9	98.8	328	4	0	1	328	200	527	1.2e-186	661.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050625	MS.gene055893	0.813918	2.01E-51	-1.69E-46
MS.gene051360	MS.gene055893	0.802877	4.55E-49	-1.69E-46
MS.gene052414	MS.gene055893	0.802644	5.09E-49	-1.69E-46
MS.gene052982	MS.gene055893	0.835694	1.45E-56	-1.69E-46
MS.gene053318	MS.gene055893	0.823833	1.12E-53	-1.69E-46
MS.gene055892	MS.gene055893	0.971117	1.16E-132	-1.69E-46
MS.gene055893	MS.gene055894	0.941242	5.84E-101	-1.69E-46
MS.gene055893	MS.gene055895	0.894609	2.10E-75	-1.69E-46
MS.gene055893	MS.gene057289	0.803367	3.61E-49	-1.69E-46
MS.gene055893	MS.gene059420	0.800227	1.59E-48	-1.69E-46
MS.gene055893	MS.gene059946	0.810861	9.34E-51	-1.69E-46
MS.gene055893	MS.gene060837	0.810148	1.33E-50	-1.69E-46
MS.gene055893	MS.gene064830	0.816036	6.80E-52	-1.69E-46
MS.gene055893	MS.gene066406	0.800102	1.69E-48	-1.69E-46
MS.gene055893	MS.gene07137	0.801023	1.09E-48	-1.69E-46
MS.gene055893	MS.gene07139	0.800779	1.23E-48	-1.69E-46
MS.gene055893	MS.gene07214	0.80122	9.98E-49	-1.69E-46
MS.gene055893	MS.gene09570	0.824444	8.04E-54	-1.69E-46
MS.gene055893	MS.gene33017	0.828082	1.10E-54	-1.69E-46
MS.gene055893	MS.gene33072	0.818166	2.26E-52	-1.69E-46
MS.gene055893	MS.gene33218	0.853488	2.31E-61	-1.69E-46
MS.gene055893	MS.gene37408	0.828679	7.86E-55	-1.69E-46
MS.gene055893	MS.gene39277	0.81955	1.10E-52	-1.69E-46
MS.gene055893	MS.gene42899	0.989419	4.84E-178	-1.69E-46
MS.gene055893	MS.gene42900	0.99103	1.55E-185	-1.69E-46
MS.gene055893	MS.gene49436	0.813952	1.97E-51	-1.69E-46
MS.gene055893	MS.gene49979	0.806394	8.40E-50	-1.69E-46
MS.gene055893	MS.gene50985	0.810963	8.87E-51	-1.69E-46
MS.gene055893	MS.gene52776	0.803159	3.98E-49	-1.69E-46
MS.gene055893	MS.gene53419	0.821715	3.48E-53	-1.69E-46
MS.gene055893	MS.gene54795	0.805156	1.53E-49	-1.69E-46
MS.gene055893	MS.gene55868	0.83351	5.12E-56	-1.69E-46
MS.gene055893	MS.gene61160	0.807376	5.21E-50	-1.69E-46
MS.gene055893	MS.gene66440	0.827336	1.66E-54	-1.69E-46
MS.gene055893	MS.gene67279	0.816168	6.35E-52	-1.69E-46
MS.gene055893	MS.gene73228	0.807371	5.22E-50	-1.69E-46
MS.gene055893	MS.gene75660	0.800274	1.56E-48	-1.69E-46
MS.gene055893	MS.gene78643	0.808898	2.47E-50	-1.69E-46
MS.gene055893	MS.gene79903	0.800701	1.27E-48	-1.69E-46
MS.gene055893	MS.gene81254	0.809872	1.53E-50	-1.69E-46
MS.gene055893	MS.gene90462	0.81754	3.13E-52	-1.69E-46
MS.gene055893	MS.gene90772	0.815408	9.39E-52	-1.69E-46
MS.gene055893	MS.gene92549	0.80042	1.45E-48	-1.69E-46
MS.gene055893	MS.gene94682	0.802243	6.15E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene055893	MS.gene048867	PPI
MS.gene055893	MS.gene89714	PPI
MS.gene055893	MS.gene55742	PPI
MS.gene06009	MS.gene055893	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055893.t1	MTR_6g463260	98.780	328	4	0	1	328	200	527	0.0	681
MS.gene055893.t1	MTR_5g011400	60.671	328	129	0	1	328	167	494	2.02e-155	445
MS.gene055893.t1	MTR_8g101750	48.457	324	166	1	1	323	100	423	7.85e-124	362
MS.gene055893.t1	MTR_6g091760	48.765	324	165	1	1	323	108	431	1.06e-122	360
MS.gene055893.t1	MTR_4g097540	47.198	339	168	4	1	328	99	437	1.69e-121	357
MS.gene055893.t1	MTR_3g103550	47.748	333	168	2	1	328	98	429	2.45e-117	347
MS.gene055893.t1	MTR_5g015020	45.373	335	174	4	1	326	99	433	8.07e-117	346
MS.gene055893.t1	MTR_8g098930	44.377	329	180	1	1	326	107	435	4.33e-111	332
MS.gene055893.t1	MTR_8g101820	43.731	327	170	3	1	326	100	413	2.47e-107	320
MS.gene055893.t1	MTR_8g028600	42.331	326	188	0	1	326	106	431	5.06e-104	313
MS.gene055893.t1	MTR_7g079080	42.202	327	188	1	1	326	1	327	2.89e-102	305
MS.gene055893.t1	MTR_7g079080	42.202	327	188	1	1	326	106	432	1.01e-100	305
MS.gene055893.t1	MTR_5g033230	25.215	349	211	12	12	324	129	463	3.74e-20	91.3
MS.gene055893.t1	MTR_5g033230	26.429	280	164	9	12	262	129	395	6.11e-18	84.7
MS.gene055893.t1	MTR_8g023140	21.257	334	238	11	12	322	180	511	1.10e-14	75.1
MS.gene055893.t1	MTR_2g090615	29.670	182	102	5	10	184	105	267	1.08e-12	68.9
MS.gene055893.t1	MTR_7g106830	21.148	331	229	12	9	326	153	464	1.81e-12	68.2
MS.gene055893.t1	MTR_8g091280	21.429	294	212	8	9	294	155	437	2.47e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene055893.t1	AT5G51690	63.720	328	119	0	1	328	42	369	3.97e-166	467
MS.gene055893.t1	AT5G51690	63.720	328	119	0	1	328	165	492	1.40e-163	466
MS.gene055893.t1	AT1G62960	57.879	330	137	2	1	328	223	552	3.36e-147	426
MS.gene055893.t1	AT4G37770	48.640	331	166	1	1	327	99	429	1.98e-122	360
MS.gene055893.t1	AT2G22810	47.590	332	169	2	1	327	99	430	2.86e-119	352
MS.gene055893.t1	AT3G49700	48.494	332	167	1	1	328	99	430	1.73e-117	347
MS.gene055893.t1	AT5G65800	46.687	332	173	1	1	328	99	430	2.39e-115	342
MS.gene055893.t1	AT4G26200	47.734	331	167	2	1	327	114	442	3.33e-115	341
MS.gene055893.t1	AT4G08040	44.985	329	180	1	1	328	97	425	4.47e-113	336
MS.gene055893.t1	AT4G11280	45.062	324	177	1	1	323	110	433	1.80e-110	330
MS.gene055893.t1	AT1G01480	42.121	330	187	2	1	326	1	330	1.14e-102	306
MS.gene055893.t1	AT3G61510	41.284	327	188	2	1	326	106	429	4.10e-101	306
MS.gene055893.t1	AT1G01480	42.121	330	187	2	1	326	107	436	6.48e-101	306
MS.gene055893.t1	AT1G70580	26.176	340	219	14	12	324	129	463	2.84e-20	91.7
MS.gene055893.t1	AT1G70580	26.176	340	219	14	12	324	129	463	2.84e-20	91.7
MS.gene055893.t1	AT1G70580	26.176	340	219	14	12	324	129	463	2.84e-20	91.7
MS.gene055893.t1	AT1G70580	26.176	340	219	14	12	324	129	463	2.84e-20	91.7
MS.gene055893.t1	AT1G23310	25.294	340	222	13	12	324	129	463	3.50e-20	91.3
MS.gene055893.t1	AT1G23310	32.168	143	94	3	12	152	129	270	8.10e-19	87.0
MS.gene055893.t1	AT1G72330	22.000	350	228	12	12	328	196	533	8.42e-19	87.4
MS.gene055893.t1	AT1G72330	28.402	169	108	5	12	178	196	353	5.31e-18	84.7
MS.gene055893.t1	AT1G72330	21.569	357	222	12	12	322	196	540	2.71e-17	83.2
MS.gene055893.t1	AT1G17290	21.512	344	225	11	12	322	199	530	1.01e-16	81.3
MS.gene055893.t1	AT5G36160	29.444	180	101	5	8	180	102	262	1.51e-13	71.2
MS.gene055893.t1	AT2G22250	20.896	335	227	12	9	327	108	420	7.45e-12	66.2
MS.gene055893.t1	AT2G22250	20.896	335	227	12	9	327	155	467	1.03e-11	65.9
MS.gene055893.t1	AT2G22250	20.896	335	227	12	9	327	155	467	1.03e-11	65.9
MS.gene055893.t1	AT2G24850	22.876	306	208	8	15	309	116	404	3.31e-11	64.3

Find 74 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAAGACTGAAAAGCATTTC+TGG	0.240255	6.2:-64285990	None:intergenic
AGAAAGGAGAACTTGAATTA+TGG	0.243969	6.2:+64286468	MS.gene055893:CDS
TTCACACAACAAAACTGTTT+TGG	0.255365	6.2:+64286205	MS.gene055893:CDS
TCAAAAGACCTTTCGATTGC+TGG	0.288659	6.2:+64286161	MS.gene055893:CDS
AGCACACTTGATTCCTAGTT+TGG	0.291076	6.2:-64286384	None:intergenic
TTCCGATAAACGATTCATTC+AGG	0.315188	6.2:+64286298	MS.gene055893:CDS
GTCGATTACCCTGGATAATA+AGG	0.320746	6.2:-64285534	None:intergenic
AGAATTTGACCCGTCAAATA+TGG	0.338798	6.2:+64285428	MS.gene055893:CDS
TTCCTGAATGAATCGTTTAT+CGG	0.368687	6.2:-64286300	None:intergenic
GAAAGGAGAACTTGAATTAT+GGG	0.372458	6.2:+64286469	MS.gene055893:CDS
AACGATAGTATCTCAATTGC+AGG	0.378929	6.2:-64285471	None:intergenic
AGTTCTCCTTTCTCGCTATA+AGG	0.388101	6.2:-64286458	None:intergenic
GCACCCGTCTTATTCTATTT+CGG	0.391124	6.2:-64286337	None:intergenic
AAATCCCTCTAGTTATTGAT+AGG	0.392176	6.2:+64286597	MS.gene055893:CDS
CTCTAGTTATTGATAGGATT+CGG	0.409149	6.2:+64286603	MS.gene055893:CDS
CTTGACTAAATGCTTGTTCA+AGG	0.411999	6.2:-64285893	None:intergenic
GTCCCTACACCTTATTATCC+AGG	0.416731	6.2:+64285525	MS.gene055893:CDS
ATTGCTGACGAAGTATTTGC+AGG	0.422387	6.2:+64286044	MS.gene055893:CDS
AGTGATTATGCAGCTTTGAC+AGG	0.425900	6.2:+64285790	MS.gene055893:intron
ATCAGACCTTATAGCGAGAA+AGG	0.438192	6.2:+64286452	MS.gene055893:CDS
GCAGCGCCGGTATGTTCTGT+TGG	0.448478	6.2:+64286411	MS.gene055893:CDS
CAGCGCCGGTATGTTCTGTT+GGG	0.459303	6.2:+64286412	MS.gene055893:CDS
ATGCAATGGCAAGCCGATCC+AGG	0.473529	6.2:-64286527	None:intergenic
GCTAAGATAAATATAACTCC+TGG	0.479435	6.2:+64286509	MS.gene055893:CDS
CCGTCTTATTCTATTTCGGT+TGG	0.485045	6.2:-64286333	None:intergenic
GGTGTCAGAATATTGCCAAC+AGG	0.485404	6.2:-64285969	None:intergenic
TCAGTACTTCGACAGTGAAC+AGG	0.488659	6.2:-64285846	None:intergenic
ATATTGCCAACAGGATTTGA+AGG	0.489937	6.2:-64285960	None:intergenic
ACGGGTGCACAATGAGTTTG+TGG	0.494025	6.2:+64286352	MS.gene055893:CDS
AGGGACGTAAGATGGCGTCC+AGG	0.510730	6.2:+64285810	MS.gene055893:CDS
GATGTTAGTACCATATTTGA+CGG	0.511266	6.2:-64285438	None:intergenic
TCAAATATGGTACTAACATC+GGG	0.513697	6.2:+64285441	MS.gene055893:CDS
TGAGATACTATCGTTCTGCT+TGG	0.519831	6.2:+64285479	MS.gene055893:CDS
GTGGATTGTTTAACCAAACT+AGG	0.523731	6.2:+64286371	MS.gene055893:CDS
GTATTTGCAGGCTCCACGTA+CGG	0.524369	6.2:+64286056	MS.gene055893:CDS
GCTTTGACAGGGACGTAAGA+TGG	0.539978	6.2:+64285802	MS.gene055893:intron
GATAAATATAACTCCTGGAT+CGG	0.540003	6.2:+64286514	MS.gene055893:CDS
TCGATTGCTGGATTTAGAGT+CGG	0.540691	6.2:+64286173	MS.gene055893:CDS
ACCATCCTGGTTCTATGCAA+TGG	0.546338	6.2:-64286541	None:intergenic
GATAATAAGGTGTAGGGACA+AGG	0.549163	6.2:-64285521	None:intergenic
CTCTAAATCCAGCAATCGAA+AGG	0.554066	6.2:-64286169	None:intergenic
TATTGCCAACAGGATTTGAA+GGG	0.556392	6.2:-64285959	None:intergenic
GTCAAATATGGTACTAACAT+CGG	0.563753	6.2:+64285440	MS.gene055893:CDS
ACAGGTATTAAGTCTATCCC+TGG	0.566102	6.2:-64285828	None:intergenic
TCCCTACACCTTATTATCCA+GGG	0.567075	6.2:+64285526	MS.gene055893:CDS
AAGTGTGCTAAGAGCAGCGC+CGG	0.573828	6.2:+64286398	MS.gene055893:CDS
GAAGTAACTAACCTCTGTGT+TGG	0.575820	6.2:-64286269	None:intergenic
GCCATTGCATAGAACCAGGA+TGG	0.576139	6.2:+64286540	MS.gene055893:CDS
ATATTCTGAATCGAGAACTT+CGG	0.576552	6.2:-64286102	None:intergenic
TTCTGTTGGGCTGATATGAG+TGG	0.577234	6.2:+64286425	MS.gene055893:CDS
GTGATTATGCAGCTTTGACA+GGG	0.578099	6.2:+64285791	MS.gene055893:intron
ATGTTAGTACCATATTTGAC+GGG	0.579929	6.2:-64285437	None:intergenic
AAACTCCTCGCTTCCGTACG+TGG	0.582162	6.2:-64286069	None:intergenic
ACCCTGGATAATAAGGTGTA+GGG	0.583042	6.2:-64285527	None:intergenic
CGAATCCTATCAATAACTAG+AGG	0.584201	6.2:-64286602	None:intergenic
TCGTTCTGCTTGGCAGACCA+TGG	0.585867	6.2:+64285489	MS.gene055893:CDS
AGCCGCGTTCATATAGTGTA+CGG	0.586505	6.2:+64286134	MS.gene055893:CDS
AAACGAGGAGTCAAAGTTCG+CGG	0.587306	6.2:+64285921	MS.gene055893:CDS
TACCCTGGATAATAAGGTGT+AGG	0.592046	6.2:-64285528	None:intergenic
CAACCGAAATAGAATAAGAC+GGG	0.592241	6.2:+64286334	MS.gene055893:CDS
AAACAAATACGAAACCATCC+TGG	0.595378	6.2:-64286554	None:intergenic
GGGACGTAAGATGGCGTCCA+GGG	0.596829	6.2:+64285811	MS.gene055893:CDS
TTGACTAAATGCTTGTTCAA+GGG	0.597175	6.2:-64285892	None:intergenic
TCGAACCCTTCAAATCCTGT+TGG	0.599882	6.2:+64285954	MS.gene055893:CDS
GGACAAGGAATGCATTTCCA+TGG	0.601989	6.2:-64285506	None:intergenic
GCTTGCCATTGCATAGAACC+AGG	0.608825	6.2:+64286536	MS.gene055893:CDS
TTTATGCATCAGGTTATGGG+AGG	0.621158	6.2:+64285399	None:intergenic
AGGCTCCACGTACGGAAGCG+AGG	0.623216	6.2:+64286064	MS.gene055893:CDS
CCAACCGAAATAGAATAAGA+CGG	0.633080	6.2:+64286333	MS.gene055893:CDS
ATCAGCCCAACAGAACATAC+CGG	0.634233	6.2:-64286417	None:intergenic
GAATCCTATCAATAACTAGA+GGG	0.646614	6.2:-64286601	None:intergenic
TTTAGTCAAGCAAGAAAACG+AGG	0.661177	6.2:+64285906	MS.gene055893:CDS
GGCCGTACACTATATGAACG+CGG	0.742883	6.2:-64286136	None:intergenic
CTATATCTGCACCAACACAG+AGG	0.756871	6.2:+64286258	MS.gene055893:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATGTATAAAAACTATTTATA+AGG	+	chr6.2:64285688-64285707	MS.gene055893:intron	10.0%
!!!	TAAACTATTGATTCCTATTT+GGG	+	chr6.2:64285567-64285586	MS.gene055893:intron	20.0%
!!!	TTAAACTATTGATTCCTATT+TGG	+	chr6.2:64285566-64285585	MS.gene055893:intron	20.0%
!	AGATCAAATAAAACCCAAAT+AGG	-	chr6.2:64285583-64285602	None:intergenic	25.0%
!	CATTTCTCTTAAAAGAAGTT+AGG	+	chr6.2:64285616-64285635	MS.gene055893:intron	25.0%
!!!	TGAAAATCTGCTCATTTTTT+TGG	-	chr6.2:64286237-64286256	None:intergenic	25.0%
	AAATCCCTCTAGTTATTGAT+AGG	+	chr6.2:64286597-64286616	MS.gene055893:CDS	30.0%
	AGAAAGGAGAACTTGAATTA+TGG	+	chr6.2:64286468-64286487	MS.gene055893:CDS	30.0%
	ATATTCTGAATCGAGAACTT+CGG	-	chr6.2:64286105-64286124	None:intergenic	30.0%
	ATGTTAGTACCATATTTGAC+GGG	-	chr6.2:64285440-64285459	None:intergenic	30.0%
	CTCTAGTTATTGATAGGATT+CGG	+	chr6.2:64286603-64286622	MS.gene055893:CDS	30.0%
	GAAAGGAGAACTTGAATTAT+GGG	+	chr6.2:64286469-64286488	MS.gene055893:CDS	30.0%
	GAATCCTATCAATAACTAGA+GGG	-	chr6.2:64286604-64286623	None:intergenic	30.0%
	GATAAATATAACTCCTGGAT+CGG	+	chr6.2:64286514-64286533	MS.gene055893:CDS	30.0%
	GATGTTAGTACCATATTTGA+CGG	-	chr6.2:64285441-64285460	None:intergenic	30.0%
	GCTAAGATAAATATAACTCC+TGG	+	chr6.2:64286509-64286528	MS.gene055893:CDS	30.0%
	GTCAAATATGGTACTAACAT+CGG	+	chr6.2:64285440-64285459	MS.gene055893:CDS	30.0%
	TCAAATATGGTACTAACATC+GGG	+	chr6.2:64285441-64285460	MS.gene055893:CDS	30.0%
	TTCCTGAATGAATCGTTTAT+CGG	-	chr6.2:64286303-64286322	None:intergenic	30.0%
	TTGACTAAATGCTTGTTCAA+GGG	-	chr6.2:64285895-64285914	None:intergenic	30.0%
!	TTCACACAACAAAACTGTTT+TGG	+	chr6.2:64286205-64286224	MS.gene055893:CDS	30.0%
!	TTTTACAACTATATCGTTCG+AGG	+	chr6.2:64286574-64286593	MS.gene055893:CDS	30.0%
	AAACAAATACGAAACCATCC+TGG	-	chr6.2:64286557-64286576	None:intergenic	35.0%
	AACGATAGTATCTCAATTGC+AGG	-	chr6.2:64285474-64285493	None:intergenic	35.0%
	AGAATTTGACCCGTCAAATA+TGG	+	chr6.2:64285428-64285447	MS.gene055893:CDS	35.0%
	ATATTGCCAACAGGATTTGA+AGG	-	chr6.2:64285963-64285982	None:intergenic	35.0%
	CAACCGAAATAGAATAAGAC+GGG	+	chr6.2:64286334-64286353	MS.gene055893:CDS	35.0%
	CCAACCGAAATAGAATAAGA+CGG	+	chr6.2:64286333-64286352	MS.gene055893:CDS	35.0%
	CGAATCCTATCAATAACTAG+AGG	-	chr6.2:64286605-64286624	None:intergenic	35.0%
	CTTGACTAAATGCTTGTTCA+AGG	-	chr6.2:64285896-64285915	None:intergenic	35.0%
	TATTGCCAACAGGATTTGAA+GGG	-	chr6.2:64285962-64285981	None:intergenic	35.0%
	TTATTATCCAGGGTAATCGA+CGG	+	chr6.2:64285536-64285555	MS.gene055893:intron	35.0%
	TTCCGATAAACGATTCATTC+AGG	+	chr6.2:64286298-64286317	MS.gene055893:CDS	35.0%
	TTTAGTCAAGCAAGAAAACG+AGG	+	chr6.2:64285906-64285925	MS.gene055893:CDS	35.0%
!	CAATCGAAAGGTCTTTTGAT+AGG	-	chr6.2:64286160-64286179	None:intergenic	35.0%
!	GTGGATTGTTTAACCAAACT+AGG	+	chr6.2:64286371-64286390	MS.gene055893:CDS	35.0%
!!	AGAAGACTGAAAAGCATTTC+TGG	-	chr6.2:64285993-64286012	None:intergenic	35.0%
	ACAGGTATTAAGTCTATCCC+TGG	-	chr6.2:64285831-64285850	None:intergenic	40.0%
	ACCCTGGATAATAAGGTGTA+GGG	-	chr6.2:64285530-64285549	None:intergenic	40.0%
	AGCACACTTGATTCCTAGTT+TGG	-	chr6.2:64286387-64286406	None:intergenic	40.0%
	AGTTCTCCTTTCTCGCTATA+AGG	-	chr6.2:64286461-64286480	None:intergenic	40.0%
	ATCAGACCTTATAGCGAGAA+AGG	+	chr6.2:64286452-64286471	MS.gene055893:CDS	40.0%
	CTCTAAATCCAGCAATCGAA+AGG	-	chr6.2:64286172-64286191	None:intergenic	40.0%
	GAAGTAACTAACCTCTGTGT+TGG	-	chr6.2:64286272-64286291	None:intergenic	40.0%
	GATAATAAGGTGTAGGGACA+AGG	-	chr6.2:64285524-64285543	None:intergenic	40.0%
	GTCGATTACCCTGGATAATA+AGG	-	chr6.2:64285537-64285556	None:intergenic	40.0%
	TACCCTGGATAATAAGGTGT+AGG	-	chr6.2:64285531-64285550	None:intergenic	40.0%
	TCAAAAGACCTTTCGATTGC+TGG	+	chr6.2:64286161-64286180	MS.gene055893:CDS	40.0%
	TCCCTACACCTTATTATCCA+GGG	+	chr6.2:64285526-64285545	MS.gene055893:CDS	40.0%
	TGAGATACTATCGTTCTGCT+TGG	+	chr6.2:64285479-64285498	MS.gene055893:CDS	40.0%
!	AGTGATTATGCAGCTTTGAC+AGG	+	chr6.2:64285790-64285809	MS.gene055893:intron	40.0%
!	ATTGCTGACGAAGTATTTGC+AGG	+	chr6.2:64286044-64286063	MS.gene055893:CDS	40.0%
!	CCGTCTTATTCTATTTCGGT+TGG	-	chr6.2:64286336-64286355	None:intergenic	40.0%
!	GCACCCGTCTTATTCTATTT+CGG	-	chr6.2:64286340-64286359	None:intergenic	40.0%
!	GTGATTATGCAGCTTTGACA+GGG	+	chr6.2:64285791-64285810	MS.gene055893:intron	40.0%
!	TCGATTGCTGGATTTAGAGT+CGG	+	chr6.2:64286173-64286192	MS.gene055893:CDS	40.0%
	AAACGAGGAGTCAAAGTTCG+CGG	+	chr6.2:64285921-64285940	MS.gene055893:CDS	45.0%
	AGCCGCGTTCATATAGTGTA+CGG	+	chr6.2:64286134-64286153	MS.gene055893:CDS	45.0%
	ATCAGCCCAACAGAACATAC+CGG	-	chr6.2:64286420-64286439	None:intergenic	45.0%
	CTATATCTGCACCAACACAG+AGG	+	chr6.2:64286258-64286277	MS.gene055893:CDS	45.0%
	GGACAAGGAATGCATTTCCA+TGG	-	chr6.2:64285509-64285528	None:intergenic	45.0%
	GGTGTCAGAATATTGCCAAC+AGG	-	chr6.2:64285972-64285991	None:intergenic	45.0%
	GTCCCTACACCTTATTATCC+AGG	+	chr6.2:64285525-64285544	MS.gene055893:CDS	45.0%
	TCAGTACTTCGACAGTGAAC+AGG	-	chr6.2:64285849-64285868	None:intergenic	45.0%
	TCGAACCCTTCAAATCCTGT+TGG	+	chr6.2:64285954-64285973	MS.gene055893:CDS	45.0%
	TTCTGTTGGGCTGATATGAG+TGG	+	chr6.2:64286425-64286444	MS.gene055893:CDS	45.0%
!!	ACCATCCTGGTTCTATGCAA+TGG	-	chr6.2:64286544-64286563	None:intergenic	45.0%
!!	TAAAAATATCTTAATTAAAA+AGG	+	chr6.2:64285653-64285672	MS.gene055893:intron	5.0%
	ACGGGTGCACAATGAGTTTG+TGG	+	chr6.2:64286352-64286371	MS.gene055893:CDS	50.0%
	GCCATTGCATAGAACCAGGA+TGG	+	chr6.2:64286540-64286559	MS.gene055893:CDS	50.0%
	GCTTGCCATTGCATAGAACC+AGG	+	chr6.2:64286536-64286555	MS.gene055893:CDS	50.0%
	GCTTTGACAGGGACGTAAGA+TGG	+	chr6.2:64285802-64285821	MS.gene055893:intron	50.0%
	GGCCGTACACTATATGAACG+CGG	-	chr6.2:64286139-64286158	None:intergenic	50.0%
	GTATTTGCAGGCTCCACGTA+CGG	+	chr6.2:64286056-64286075	MS.gene055893:CDS	50.0%
	AAACTCCTCGCTTCCGTACG+TGG	-	chr6.2:64286072-64286091	None:intergenic	55.0%
	AAGTGTGCTAAGAGCAGCGC+CGG	+	chr6.2:64286398-64286417	MS.gene055893:CDS	55.0%
	ATGCAATGGCAAGCCGATCC+AGG	-	chr6.2:64286530-64286549	None:intergenic	55.0%
	TCGTTCTGCTTGGCAGACCA+TGG	+	chr6.2:64285489-64285508	MS.gene055893:CDS	55.0%
!!	CAGCGCCGGTATGTTCTGTT+GGG	+	chr6.2:64286412-64286431	MS.gene055893:CDS	55.0%
!!	GAAAGTGCCGTCGATTACCC+TGG	-	chr6.2:64285546-64285565	None:intergenic	55.0%
	AGGGACGTAAGATGGCGTCC+AGG	+	chr6.2:64285810-64285829	MS.gene055893:CDS	60.0%
	GGGACGTAAGATGGCGTCCA+GGG	+	chr6.2:64285811-64285830	MS.gene055893:CDS	60.0%
!!	GCAGCGCCGGTATGTTCTGT+TGG	+	chr6.2:64286411-64286430	MS.gene055893:CDS	60.0%
	AGGCTCCACGTACGGAAGCG+AGG	+	chr6.2:64286064-64286083	MS.gene055893:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.2	gene	64285402	64286641	64285402	ID=MS.gene055893
chr6.2	mRNA	64285402	64286641	64285402	ID=MS.gene055893.t1;Parent=MS.gene055893
chr6.2	exon	64285402	64285547	64285402	ID=MS.gene055893.t1.exon1;Parent=MS.gene055893.t1
chr6.2	CDS	64285402	64285547	64285402	ID=cds.MS.gene055893.t1;Parent=MS.gene055893.t1
chr6.2	exon	64285803	64286641	64285803	ID=MS.gene055893.t1.exon2;Parent=MS.gene055893.t1
chr6.2	CDS	64285803	64286641	64285803	ID=cds.MS.gene055893.t1;Parent=MS.gene055893.t1

Gene Sequence

>MS.gene055893

ATGCATCAGGTTATGGGAGGATCAGTAGAATTTGACCCGTCAAATATGGTACTAACATCGGGAGCAACTCCTGCAATTGAGATACTATCGTTCTGCTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACACCTTATTATCCAGGGTAATCGACGGCACTTTCTTAAACTATTGATTCCTATTTGGGTTTTATTTGATCTGACTTGTTTTTGTCATTTCTCTTAAAAGAAGTTAGGCTAAACAATATTTTTAAAAATATCTTAATTAAAAAGGAGATTATCTTTTATGTATAAAAACTATTTATAAGGAGTTTTTTTAAATCTATTTTTTTATTATTTAACTCAAATTCTATCGTTCTATAAAAAAAATTTAAAAGCTAATTAAAAAAGTGATTATGCAGCTTTGACAGGGACGTAAGATGGCGTCCAGGGATAGACTTAATACCTGTTCACTGTCGAAGTACTGACAATTTCAATCTAAACATCACTGCCCTTGAACAAGCATTTAGTCAAGCAAGAAAACGAGGAGTCAAAGTTCGCGGAATTCTCATCTCGAACCCTTCAAATCCTGTTGGCAATATTCTGACACCAGAAATGCTTTTCAGTCTTCTAGACTTTGCTGAAGATAAAAACATTCATATCATTGCTGACGAAGTATTTGCAGGCTCCACGTACGGAAGCGAGGAGTTTGTGAGTATAGCCGAAGTTCTCGATTCAGAATATATAGATAAAAGCCGCGTTCATATAGTGTACGGCCTATCAAAAGACCTTTCGATTGCTGGATTTAGAGTCGGAGTTATACATTCACACAACAAAACTGTTTTGGATGCTGCCAAAAAAATGAGCAGATTTTCATCTATATCTGCACCAACACAGAGGTTAGTTACTTCAATGCTTTCCGATAAACGATTCATTCAGGAATACATTGAAACCAACCGAAATAGAATAAGACGGGTGCACAATGAGTTTGTGGATTGTTTAACCAAACTAGGAATCAAGTGTGCTAAGAGCAGCGCCGGTATGTTCTGTTGGGCTGATATGAGTGGTTTAATCAGACCTTATAGCGAGAAAGGAGAACTTGAATTATGGGAGAAGTTTATGAGTGTTGCTAAGATAAATATAACTCCTGGATCGGCTTGCCATTGCATAGAACCAGGATGGTTTCGTATTTGTTTTACAACTATATCGTTCGAGGAAATCCCTCTAGTTATTGATAGGATTCGGAAAGTTGTTGAAAGTT

Protein sequence

>MS.gene055893.t1

MHQVMGGSVEFDPSNMVLTSGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGIDLIPVHCRSTDNFNLNITALEQAFSQARKRGVKVRGILISNPSNPVGNILTPEMLFSLLDFAEDKNIHIIADEVFAGSTYGSEEFVSIAEVLDSEYIDKSRVHIVYGLSKDLSIAGFRVGVIHSHNKTVLDAAKKMSRFSSISAPTQRLVTSMLSDKRFIQEYIETNRNRIRRVHNEFVDCLTKLGIKCAKSSAGMFCWADMSGLIRPYSEKGELELWEKFMSVAKINITPGSACHCIEPGWFRICFTTISFEEIPLVIDRIRKVVES