Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42924.t1 | RHN52042.1 | 99.4 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 7.70E-168 | 599.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42924.t1 | Q9LVB0 | 52.9 | 223 | 89 | 7 | 56 | 265 | 81 | 300 | 7.1e-45 | 182.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42924.t1 | A0A396HFC3 | 99.4 | 319 | 2 | 0 | 1 | 319 | 1 | 319 | 5.5e-168 | 599.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050165 | MS.gene42924 | -0.808497 | 3.01E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene42924 | -0.810683 | 1.02E-50 | -1.69E-46 |
| MS.gene050518 | MS.gene42924 | -0.805378 | 1.37E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene42924 | -0.811265 | 7.63E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene42924 | -0.823862 | 1.10E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene42924 | -0.834045 | 3.76E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene42924 | -0.80256 | 5.30E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene42924 | -0.837791 | 4.22E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene42924 | -0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene42924 | -0.845287 | 4.46E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene42924 | -0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene42924 | -0.815299 | 9.92E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene42924 | -0.805581 | 1.25E-49 | -1.69E-46 |
| MS.gene056510 | MS.gene42924 | -0.802501 | 5.45E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene42924 | 0.819464 | 1.15E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene42924 | -0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene42924 | -0.828152 | 1.05E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene42924 | -0.814992 | 1.16E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42924.t1 | MTR_6g061670 | 99.060 | 319 | 3 | 0 | 1 | 319 | 1 | 319 | 0.0 | 634 |
| MS.gene42924.t1 | MTR_6g061670 | 97.492 | 319 | 3 | 1 | 1 | 319 | 1 | 314 | 0.0 | 617 |
| MS.gene42924.t1 | MTR_1g076710 | 53.644 | 343 | 115 | 13 | 1 | 317 | 1 | 325 | 9.26e-89 | 269 |
| MS.gene42924.t1 | MTR_7g074935 | 41.026 | 351 | 153 | 10 | 1 | 319 | 1 | 329 | 1.55e-51 | 173 |
| MS.gene42924.t1 | MTR_6g060670 | 45.946 | 222 | 88 | 7 | 43 | 260 | 112 | 305 | 8.68e-45 | 155 |
| MS.gene42924.t1 | MTR_4g101990 | 52.679 | 224 | 87 | 7 | 43 | 258 | 64 | 276 | 4.13e-44 | 154 |
| MS.gene42924.t1 | MTR_8g036160 | 48.444 | 225 | 90 | 7 | 50 | 263 | 70 | 279 | 3.66e-40 | 144 |
| MS.gene42924.t1 | MTR_1g061530 | 41.026 | 234 | 108 | 6 | 51 | 269 | 65 | 283 | 9.52e-36 | 132 |
| MS.gene42924.t1 | MTR_5g010330 | 36.029 | 272 | 139 | 7 | 1 | 253 | 1 | 256 | 3.21e-31 | 119 |
| MS.gene42924.t1 | MTR_4g098460 | 45.223 | 157 | 70 | 3 | 127 | 268 | 78 | 233 | 2.79e-30 | 116 |
| MS.gene42924.t1 | MTR_7g077120 | 38.362 | 232 | 125 | 5 | 29 | 260 | 74 | 287 | 1.22e-29 | 115 |
| MS.gene42924.t1 | MTR_8g031100 | 40.826 | 218 | 107 | 7 | 44 | 255 | 82 | 283 | 3.00e-28 | 112 |
| MS.gene42924.t1 | MTR_5g011620 | 40.086 | 232 | 103 | 9 | 34 | 256 | 32 | 236 | 5.58e-28 | 114 |
| MS.gene42924.t1 | MTR_4g098460 | 43.827 | 162 | 70 | 4 | 127 | 268 | 78 | 238 | 7.27e-28 | 110 |
| MS.gene42924.t1 | MTR_5g011680 | 36.475 | 244 | 121 | 6 | 51 | 265 | 46 | 284 | 1.50e-27 | 109 |
| MS.gene42924.t1 | MTR_4g055803 | 40.254 | 236 | 115 | 9 | 50 | 279 | 59 | 274 | 8.44e-26 | 107 |
| MS.gene42924.t1 | MTR_8g098390 | 37.879 | 198 | 108 | 3 | 50 | 245 | 96 | 280 | 1.04e-25 | 105 |
| MS.gene42924.t1 | MTR_4g055813 | 45.270 | 148 | 75 | 4 | 133 | 279 | 22 | 164 | 1.57e-24 | 100 |
| MS.gene42924.t1 | MTR_4g055833 | 37.768 | 233 | 125 | 7 | 50 | 279 | 56 | 271 | 7.07e-24 | 100 |
| MS.gene42924.t1 | MTR_1g079780 | 37.198 | 207 | 108 | 6 | 48 | 250 | 40 | 228 | 7.91e-24 | 99.8 |
| MS.gene42924.t1 | MTR_7g116320 | 49.167 | 120 | 58 | 1 | 127 | 246 | 140 | 256 | 4.26e-23 | 98.6 |
| MS.gene42924.t1 | MTR_3g100470 | 37.589 | 141 | 76 | 3 | 118 | 257 | 96 | 225 | 8.77e-23 | 96.3 |
| MS.gene42924.t1 | MTR_4g055705 | 35.586 | 222 | 133 | 6 | 50 | 265 | 55 | 272 | 3.26e-22 | 95.1 |
| MS.gene42924.t1 | MTR_5g011610 | 44.628 | 121 | 62 | 1 | 134 | 254 | 62 | 177 | 3.98e-22 | 95.1 |
| MS.gene42924.t1 | MTR_5g011610 | 46.392 | 97 | 49 | 1 | 126 | 222 | 208 | 301 | 2.04e-17 | 82.0 |
| MS.gene42924.t1 | MTR_7g116320 | 48.276 | 116 | 57 | 1 | 127 | 242 | 140 | 252 | 1.02e-20 | 90.1 |
| MS.gene42924.t1 | MTR_1g038960 | 36.744 | 215 | 116 | 6 | 39 | 251 | 73 | 269 | 1.68e-20 | 90.9 |
| MS.gene42924.t1 | MTR_3g068035 | 43.966 | 116 | 62 | 1 | 130 | 245 | 106 | 218 | 1.52e-17 | 82.0 |
| MS.gene42924.t1 | MTR_5g066020 | 37.500 | 144 | 75 | 5 | 116 | 257 | 73 | 203 | 3.66e-17 | 80.1 |
| MS.gene42924.t1 | MTR_5g013390 | 33.981 | 206 | 114 | 7 | 44 | 245 | 74 | 261 | 1.35e-16 | 79.7 |
| MS.gene42924.t1 | MTR_5g014360 | 40.833 | 120 | 67 | 2 | 127 | 245 | 187 | 303 | 2.58e-16 | 79.3 |
| MS.gene42924.t1 | MTR_1g038990 | 33.992 | 253 | 125 | 12 | 1 | 251 | 37 | 249 | 1.35e-15 | 76.6 |
| MS.gene42924.t1 | MTR_3g023560 | 33.333 | 153 | 96 | 2 | 116 | 265 | 48 | 197 | 2.40e-15 | 75.1 |
| MS.gene42924.t1 | MTR_1g044155 | 38.983 | 118 | 69 | 1 | 128 | 245 | 151 | 265 | 5.08e-14 | 72.4 |
| MS.gene42924.t1 | MTR_4g098450 | 42.373 | 118 | 61 | 2 | 130 | 245 | 103 | 215 | 5.74e-14 | 71.6 |
| MS.gene42924.t1 | MTR_7g080980 | 42.017 | 119 | 66 | 1 | 127 | 245 | 81 | 196 | 1.42e-13 | 70.1 |
| MS.gene42924.t1 | MTR_5g080580 | 41.071 | 112 | 63 | 1 | 134 | 245 | 120 | 228 | 1.92e-13 | 70.5 |
| MS.gene42924.t1 | MTR_3g116100 | 39.259 | 135 | 62 | 5 | 141 | 264 | 154 | 279 | 3.19e-13 | 69.7 |
| MS.gene42924.t1 | MTR_1g073860 | 38.793 | 116 | 68 | 1 | 130 | 245 | 121 | 233 | 4.38e-13 | 69.3 |
| MS.gene42924.t1 | MTR_5g011520 | 41.379 | 116 | 65 | 1 | 130 | 245 | 127 | 239 | 1.31e-12 | 67.8 |
| MS.gene42924.t1 | MTR_5g011700 | 41.509 | 106 | 58 | 2 | 141 | 245 | 10 | 112 | 3.02e-12 | 65.1 |
| MS.gene42924.t1 | MTR_5g041430 | 36.975 | 119 | 73 | 2 | 127 | 244 | 108 | 225 | 3.79e-12 | 66.2 |
| MS.gene42924.t1 | MTR_1g079810 | 38.793 | 116 | 68 | 1 | 130 | 245 | 101 | 213 | 4.14e-12 | 66.2 |
| MS.gene42924.t1 | MTR_8g036060 | 39.655 | 116 | 67 | 1 | 130 | 245 | 113 | 225 | 4.19e-12 | 66.2 |
| MS.gene42924.t1 | MTR_5g091630 | 39.496 | 119 | 65 | 2 | 130 | 246 | 74 | 187 | 5.23e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42924.t1 | AT5G62260 | 55.000 | 220 | 84 | 6 | 50 | 257 | 75 | 291 | 2.64e-61 | 201 |
| MS.gene42924.t1 | AT5G62260 | 55.000 | 220 | 84 | 6 | 50 | 257 | 75 | 291 | 2.64e-61 | 201 |
| MS.gene42924.t1 | AT5G62260 | 55.556 | 207 | 81 | 5 | 50 | 248 | 75 | 278 | 1.42e-59 | 192 |
| MS.gene42924.t1 | AT4G25320 | 48.400 | 250 | 118 | 5 | 38 | 281 | 73 | 317 | 1.93e-58 | 193 |
| MS.gene42924.t1 | AT4G12080 | 50.000 | 236 | 93 | 9 | 45 | 264 | 84 | 310 | 6.20e-52 | 175 |
| MS.gene42924.t1 | AT5G51590 | 52.511 | 219 | 83 | 3 | 49 | 246 | 76 | 294 | 2.33e-51 | 175 |
| MS.gene42924.t1 | AT4G00200 | 47.773 | 247 | 80 | 7 | 38 | 264 | 43 | 260 | 6.93e-48 | 163 |
| MS.gene42924.t1 | AT4G00200 | 47.773 | 247 | 80 | 7 | 38 | 264 | 43 | 260 | 6.93e-48 | 163 |
| MS.gene42924.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.57e-42 | 150 |
| MS.gene42924.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.57e-42 | 150 |
| MS.gene42924.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.57e-42 | 150 |
| MS.gene42924.t1 | AT2G33620 | 46.789 | 218 | 99 | 4 | 50 | 265 | 96 | 298 | 1.57e-42 | 150 |
| MS.gene42924.t1 | AT4G22770 | 44.635 | 233 | 116 | 5 | 50 | 274 | 71 | 298 | 2.07e-40 | 144 |
| MS.gene42924.t1 | AT4G22770 | 44.635 | 233 | 116 | 5 | 50 | 274 | 71 | 298 | 2.07e-40 | 144 |
| MS.gene42924.t1 | AT5G46640 | 42.593 | 216 | 113 | 4 | 48 | 258 | 99 | 308 | 2.20e-31 | 121 |
| MS.gene42924.t1 | AT4G17950 | 40.724 | 221 | 114 | 4 | 49 | 254 | 129 | 347 | 1.50e-30 | 120 |
| MS.gene42924.t1 | AT2G45850 | 46.212 | 132 | 68 | 1 | 127 | 255 | 159 | 290 | 1.23e-29 | 116 |
| MS.gene42924.t1 | AT2G45850 | 46.212 | 132 | 68 | 1 | 127 | 255 | 159 | 290 | 1.23e-29 | 116 |
| MS.gene42924.t1 | AT1G63470 | 40.404 | 198 | 106 | 6 | 50 | 245 | 104 | 291 | 1.26e-29 | 116 |
| MS.gene42924.t1 | AT3G04590 | 45.968 | 124 | 64 | 1 | 127 | 250 | 168 | 288 | 7.52e-28 | 110 |
| MS.gene42924.t1 | AT3G04590 | 47.899 | 119 | 59 | 1 | 127 | 245 | 168 | 283 | 1.63e-27 | 111 |
| MS.gene42924.t1 | AT2G45850 | 47.059 | 119 | 63 | 0 | 127 | 245 | 159 | 277 | 3.12e-27 | 108 |
| MS.gene42924.t1 | AT3G61310 | 33.865 | 251 | 131 | 5 | 45 | 277 | 95 | 328 | 4.07e-26 | 106 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 157 | 274 | 1.04e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 157 | 274 | 1.04e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.19e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.19e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.19e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.19e-24 | 102 |
| MS.gene42924.t1 | AT1G63480 | 44.538 | 119 | 65 | 1 | 127 | 245 | 151 | 268 | 1.19e-24 | 102 |
| MS.gene42924.t1 | AT5G49700 | 38.194 | 144 | 74 | 4 | 118 | 257 | 78 | 210 | 2.70e-20 | 89.4 |
| MS.gene42924.t1 | AT2G36560 | 38.636 | 132 | 79 | 2 | 127 | 256 | 102 | 233 | 7.39e-19 | 87.4 |
| MS.gene42924.t1 | AT4G14465 | 43.103 | 116 | 63 | 1 | 130 | 245 | 94 | 206 | 2.98e-16 | 77.8 |
| MS.gene42924.t1 | AT1G14490 | 37.086 | 151 | 80 | 4 | 133 | 279 | 33 | 172 | 5.21e-16 | 75.9 |
| MS.gene42924.t1 | AT1G14490 | 39.535 | 129 | 70 | 3 | 133 | 257 | 52 | 176 | 1.21e-15 | 75.1 |
| MS.gene42924.t1 | AT2G35270 | 43.333 | 120 | 61 | 2 | 128 | 245 | 103 | 217 | 3.47e-15 | 75.1 |
| MS.gene42924.t1 | AT3G60870 | 37.069 | 116 | 68 | 2 | 130 | 245 | 86 | 196 | 8.23e-14 | 70.9 |
| MS.gene42924.t1 | AT3G55560 | 40.517 | 116 | 67 | 2 | 130 | 245 | 115 | 228 | 1.43e-13 | 70.5 |
| MS.gene42924.t1 | AT4G17800 | 40.517 | 116 | 66 | 1 | 130 | 245 | 109 | 221 | 1.62e-13 | 70.1 |
| MS.gene42924.t1 | AT1G76500 | 36.800 | 125 | 67 | 2 | 130 | 245 | 99 | 220 | 2.21e-13 | 70.1 |
| MS.gene42924.t1 | AT5G28590 | 33.333 | 147 | 74 | 2 | 108 | 254 | 8 | 130 | 9.06e-13 | 67.0 |
| MS.gene42924.t1 | AT2G42940 | 36.134 | 119 | 69 | 2 | 130 | 246 | 80 | 193 | 5.60e-12 | 65.5 |
Find 81 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAGATTCACTCTTTCT+AGG | 0.207106 | 6.4:-43139660 | None:intergenic |
| GGGTGCACTGGCTGGTTTGC+TGG | 0.209879 | 6.4:+43143752 | MS.gene42924:CDS |
| GGCCCCACCTGGCTTCAATT+TGG | 0.255143 | 6.4:+43139542 | MS.gene42924:CDS |
| CTCTTTGGATTCTCCTTCTC+TGG | 0.284566 | 6.4:-43144479 | None:intergenic |
| TGATCGACCCTCTGCCTCTT+TGG | 0.296914 | 6.4:-43144494 | None:intergenic |
| AACGGAATGGAAGCCGAAAT+TGG | 0.321360 | 6.4:-43139705 | None:intergenic |
| CATGTGCTTACTGTAAATTC+TGG | 0.373117 | 6.4:+43141079 | MS.gene42924:CDS |
| AGTGGTGGTGGTGGAGGTGG+AGG | 0.384533 | 6.4:+43139753 | MS.gene42924:CDS |
| TTTGGCAATGGCCAAGGCTC+TGG | 0.387972 | 6.4:+43144641 | MS.gene42924:CDS |
| CCGGCTCCGGTGCCGGCTGC+CGG | 0.388810 | 6.4:+43139606 | MS.gene42924:CDS |
| GAAGAATTGAGAACTGATAT+TGG | 0.391643 | 6.4:+43144572 | MS.gene42924:CDS |
| GGCTTCTTAATTGATTCAAA+TGG | 0.394342 | 6.4:-43139786 | None:intergenic |
| AATATCAGTTCTCAATTCTT+CGG | 0.403456 | 6.4:-43144570 | None:intergenic |
| AAAAGTGGTGGTGGTGGAGG+TGG | 0.408449 | 6.4:+43139750 | MS.gene42924:CDS |
| GTTGTCACCGATGCCAATTT+CGG | 0.412586 | 6.4:+43139692 | MS.gene42924:CDS |
| TGGGTCCACTGGAGAGTTAC+CGG | 0.422219 | 6.4:+43139587 | MS.gene42924:CDS |
| TGGTGGTACTTCAACGTATG+AGG | 0.429304 | 6.4:+43142792 | MS.gene42924:CDS |
| TGGAAAAGTGGTGGTGGTGG+AGG | 0.429615 | 6.4:+43139747 | MS.gene42924:CDS |
| TCGGCTTCCATTCCGTTGAC+CGG | 0.436479 | 6.4:+43139711 | MS.gene42924:CDS |
| CACTGGAGAGTTACCGGCTC+CGG | 0.437007 | 6.4:+43139593 | MS.gene42924:CDS |
| AGGCCTAGAAAGAGTGAATC+TGG | 0.438792 | 6.4:+43139657 | MS.gene42924:CDS |
| GGTTGGAAAAGTGGTGGTGG+TGG | 0.438943 | 6.4:+43139744 | MS.gene42924:CDS |
| GCTGGTTTGCTGGTAGCTGC+TGG | 0.440446 | 6.4:+43143762 | MS.gene42924:CDS |
| TCAGGTTGGAAAAGTGGTGG+TGG | 0.447028 | 6.4:+43139741 | MS.gene42924:CDS |
| GAGGCAGAGGGTCGATCATT+CGG | 0.452684 | 6.4:+43144499 | MS.gene42924:CDS |
| AAACCGGCCGGTGACATGAT+AGG | 0.454468 | 6.4:-43144605 | None:intergenic |
| TCAAAATCATTCAACTTCAA+AGG | 0.458053 | 6.4:-43139807 | None:intergenic |
| TCATTTGTGCCAACTGAGAA+TGG | 0.458331 | 6.4:+43143663 | MS.gene42924:CDS |
| GGATTGACAAAGAGCAGATC+TGG | 0.464623 | 6.4:+43143684 | MS.gene42924:CDS |
| TTTGTCAATCCATTCTCAGT+TGG | 0.465539 | 6.4:-43143672 | None:intergenic |
| ATATCCATTCTGTCTGCTAC+TGG | 0.476692 | 6.4:+43142730 | MS.gene42924:CDS |
| CCGGCAGCCGGCACCGGAGC+CGG | 0.477977 | 6.4:-43139606 | None:intergenic |
| AATTGAAGCCAGGTGGGGCC+TGG | 0.481468 | 6.4:-43139539 | None:intergenic |
| AAAAGAAGCAAAGTTAAAAC+CGG | 0.482386 | 6.4:-43144621 | None:intergenic |
| GTCTCATTGGCAGGTCCAAA+TGG | 0.485852 | 6.4:+43143717 | MS.gene42924:CDS |
| AGAGTTACCGGCTCCGGTGC+CGG | 0.492329 | 6.4:+43139599 | MS.gene42924:CDS |
| ACACCACCGGCAGCCGGCAC+CGG | 0.499899 | 6.4:-43139612 | None:intergenic |
| AGGTGAAGAAGAAGAGGGGC+AGG | 0.505369 | 6.4:+43139637 | MS.gene42924:CDS |
| AGGAGAATCCAAAGAGGCAG+AGG | 0.506599 | 6.4:+43144486 | MS.gene42924:CDS |
| TGGTAGAATGAGTGTCTCAT+TGG | 0.507910 | 6.4:+43143704 | MS.gene42924:CDS |
| GGTAGCTGCTGGTTCTGTGC+AGG | 0.510940 | 6.4:+43143773 | MS.gene42924:CDS |
| TTCGAGATTCTTTCCTTGAG+CGG | 0.516198 | 6.4:+43143639 | MS.gene42924:CDS |
| AGAATGAGTGTCTCATTGGC+AGG | 0.525010 | 6.4:+43143708 | MS.gene42924:CDS |
| AATGTTAACCAGGCCCCACC+TGG | 0.534870 | 6.4:+43139531 | MS.gene42924:CDS |
| GTGTGGAGGTGAAGAAGAAG+AGG | 0.538667 | 6.4:+43139631 | MS.gene42924:CDS |
| GATAATGGAATATCACCCTT+CGG | 0.542326 | 6.4:+43141040 | MS.gene42924:intron |
| GCTCCGGTGCCGGCTGCCGG+TGG | 0.544625 | 6.4:+43139609 | MS.gene42924:CDS |
| GCCGGCTGCCGGTGGTGTGG+AGG | 0.547593 | 6.4:+43139617 | MS.gene42924:CDS |
| ACCTCCACACCACCGGCAGC+CGG | 0.551201 | 6.4:-43139618 | None:intergenic |
| TAATATGAGATGATGTAGGA+GGG | 0.557130 | 6.4:-43144532 | None:intergenic |
| TGTGGAGGTGAAGAAGAAGA+GGG | 0.558126 | 6.4:+43139632 | MS.gene42924:CDS |
| AAAATCTCCGGTCAACGGAA+TGG | 0.558235 | 6.4:-43139718 | None:intergenic |
| GGTGCCGGCTGCCGGTGGTG+TGG | 0.560838 | 6.4:+43139614 | MS.gene42924:CDS |
| TGTGCCAGTAGCAGACAGAA+TGG | 0.564337 | 6.4:-43142734 | None:intergenic |
| GAATGTAACACTTCGCCAGT+CGG | 0.569594 | 6.4:+43142762 | MS.gene42924:CDS |
| TTAATATGAGATGATGTAGG+AGG | 0.569764 | 6.4:-43144533 | None:intergenic |
| TGGCACAAATGAGCCGCTCA+AGG | 0.571234 | 6.4:-43143652 | None:intergenic |
| AGCCAAATTGAAGCCAGGTG+GGG | 0.575359 | 6.4:-43139544 | None:intergenic |
| GAGCCAAATTGAAGCCAGGT+GGG | 0.578975 | 6.4:-43139545 | None:intergenic |
| ATGATGAGTTGCCAGAGCCT+TGG | 0.580544 | 6.4:-43144652 | None:intergenic |
| CTTCGCCAGTCGGATGCTTG+TGG | 0.582336 | 6.4:+43142772 | MS.gene42924:CDS |
| TTATTAATATGAGATGATGT+AGG | 0.582862 | 6.4:-43144536 | None:intergenic |
| TACCACCACAAGCATCCGAC+TGG | 0.584478 | 6.4:-43142777 | None:intergenic |
| CGCCAGTCGGATGCTTGTGG+TGG | 0.584964 | 6.4:+43142775 | MS.gene42924:CDS |
| GTGGAGGTGAAGAAGAAGAG+GGG | 0.585769 | 6.4:+43139633 | MS.gene42924:CDS |
| CTTCTTCACCTCCACACCAC+CGG | 0.587259 | 6.4:-43139625 | None:intergenic |
| AAGCCTATCATGTCACCGGC+CGG | 0.591028 | 6.4:+43144602 | MS.gene42924:CDS |
| GAGTGAATCTGGAAGTAAGC+CGG | 0.592179 | 6.4:+43139668 | MS.gene42924:CDS |
| GCATGCTGTTAATGTTAACC+AGG | 0.592649 | 6.4:+43139521 | MS.gene42924:CDS |
| ATTGGCATCGGTGACAACGC+CGG | 0.600825 | 6.4:-43139687 | None:intergenic |
| AATATGAGATGATGTAGGAG+GGG | 0.606351 | 6.4:-43144531 | None:intergenic |
| AATGAAGCCTATCATGTCAC+CGG | 0.606781 | 6.4:+43144598 | MS.gene42924:CDS |
| GAAGCAAAGTTAAAACCGGC+CGG | 0.607612 | 6.4:-43144617 | None:intergenic |
| CGGAGCCGGTAACTCTCCAG+TGG | 0.638034 | 6.4:-43139592 | None:intergenic |
| TGAGCCAAATTGAAGCCAGG+TGG | 0.640774 | 6.4:-43139546 | None:intergenic |
| ATGGAAGCCGAAATTGGCAT+CGG | 0.640906 | 6.4:-43139699 | None:intergenic |
| GGAGAATCCAAAGAGGCAGA+GGG | 0.642206 | 6.4:+43144487 | MS.gene42924:CDS |
| GAATTGAGAACTGATATTGG+TGG | 0.652922 | 6.4:+43144575 | MS.gene42924:CDS |
| GATGATGTAGGAGGGGCAGT+TGG | 0.671450 | 6.4:-43144524 | None:intergenic |
| GCTTACTGTAAATTCTGGAG+AGG | 0.684124 | 6.4:+43141084 | MS.gene42924:CDS |
| CAGAGAAGGAGAATCCAAAG+AGG | 0.694397 | 6.4:+43144480 | MS.gene42924:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATTGTAAAAGAAAA+TGG | + | chr6.4:43144349-43144368 | MS.gene42924:intron | 10.0% |
| !!! | ATATCATATATTTTAAAAAG+GGG | - | chr6.4:43141300-43141319 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACGCA+TGG | - | chr6.4:43142994-43143013 | None:intergenic | 15.0% |
| !! | ATAAATGAAAGAAAAACTAA+GGG | + | chr6.4:43144133-43144152 | MS.gene42924:intron | 15.0% |
| !! | ATACAATTAACAAATATGTT+TGG | - | chr6.4:43142635-43142654 | None:intergenic | 15.0% |
| !! | CAAGGTTAAAAAAAAAAAAA+AGG | - | chr6.4:43141758-43141777 | None:intergenic | 15.0% |
| !! | CATAAAAATTATTGAAACTA+GGG | - | chr6.4:43143110-43143129 | None:intergenic | 15.0% |
| !! | GTAAATGATATTATTTGATT+CGG | + | chr6.4:43140220-43140239 | MS.gene42924:intron | 15.0% |
| !! | TACAATTAACAAATATGTTT+GGG | - | chr6.4:43142634-43142653 | None:intergenic | 15.0% |
| !! | TATTTGTGAATTAGATAATA+AGG | + | chr6.4:43140965-43140984 | MS.gene42924:intron | 15.0% |
| !! | TCATAAAAATTATTGAAACT+AGG | - | chr6.4:43143111-43143130 | None:intergenic | 15.0% |
| !!! | TCATTTTTTCAAATTTTTAC+CGG | + | chr6.4:43140477-43140496 | MS.gene42924:intron | 15.0% |
| !!! | TTCATTTTAAATTGCTAAAA+AGG | + | chr6.4:43144207-43144226 | MS.gene42924:intron | 15.0% |
| !!! | TTTAAAACTTCACATTAATT+CGG | + | chr6.4:43142864-43142883 | MS.gene42924:intron | 15.0% |
| !! | AAAAGAAAAAAAAAACGGAT+CGG | - | chr6.4:43142564-43142583 | None:intergenic | 20.0% |
| !! | AATCACATAATTATATGTGT+CGG | + | chr6.4:43140329-43140348 | MS.gene42924:intron | 20.0% |
| !! | ATCCATATCATGTTTATAAT+CGG | - | chr6.4:43141965-43141984 | None:intergenic | 20.0% |
| !! | ATGAAACCATCAAATAAAAA+GGG | + | chr6.4:43143583-43143602 | MS.gene42924:intron | 20.0% |
| !! | CAGAGAAAAGAAAAAAAAAA+CGG | - | chr6.4:43142569-43142588 | None:intergenic | 20.0% |
| !! | CATAAATGAAAGAAAAACTA+AGG | + | chr6.4:43144132-43144151 | MS.gene42924:intron | 20.0% |
| !! | CTATTTCCCTAAAATAATAA+AGG | + | chr6.4:43142343-43142362 | MS.gene42924:intron | 20.0% |
| !! | GAAAATGGTTAGAAAAATAT+TGG | + | chr6.4:43144364-43144383 | MS.gene42924:intron | 20.0% |
| !! | GTACTTTCTTTAAATTAGTA+TGG | + | chr6.4:43142591-43142610 | MS.gene42924:intron | 20.0% |
| !! | TATATTAGATTGTAAATCCA+GGG | - | chr6.4:43141275-43141294 | None:intergenic | 20.0% |
| !! | TATTAAATTATTACCTGTGT+CGG | - | chr6.4:43143183-43143202 | None:intergenic | 20.0% |
| !! | TTATATTAGATTGTAAATCC+AGG | - | chr6.4:43141276-43141295 | None:intergenic | 20.0% |
| !! | TTATTAATATGAGATGATGT+AGG | - | chr6.4:43144539-43144558 | None:intergenic | 20.0% |
| !! | TTTATTACCACAAAAATTGT+CGG | - | chr6.4:43141360-43141379 | None:intergenic | 20.0% |
| !!! | AAATACTAGGTTTTTCAATT+TGG | - | chr6.4:43142036-43142055 | None:intergenic | 20.0% |
| !!! | ATCTATTTTGCTGATATAAT+TGG | + | chr6.4:43140877-43140896 | MS.gene42924:intron | 20.0% |
| !!! | GGAAATTTTGGTAAAAAAAA+TGG | - | chr6.4:43142543-43142562 | None:intergenic | 20.0% |
| !!! | GTTTTCATTGTTTACAAAAA+AGG | - | chr6.4:43144284-43144303 | None:intergenic | 20.0% |
| !!! | TCTAACTATTTTCAGAATAT+AGG | - | chr6.4:43141132-43141151 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr6.4:43140314-43140333 | None:intergenic | 20.0% |
| !!! | TTATGTGTTATGATTTGTTT+TGG | + | chr6.4:43140011-43140030 | MS.gene42924:intron | 20.0% |
| !!! | TTTAAAATGAAAACTGATGT+TGG | - | chr6.4:43144198-43144217 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTATCTTCGC+AGG | - | chr6.4:43142109-43142128 | None:intergenic | 20.0% |
| ! | AAAAGAAGCAAAGTTAAAAC+CGG | - | chr6.4:43144624-43144643 | None:intergenic | 25.0% |
| ! | AACAAATATGTTTGGGTATT+GGG | - | chr6.4:43142627-43142646 | None:intergenic | 25.0% |
| ! | AACCGATTATAAACATGATA+TGG | + | chr6.4:43141960-43141979 | MS.gene42924:intron | 25.0% |
| ! | AATATCAGTTCTCAATTCTT+CGG | - | chr6.4:43144573-43144592 | None:intergenic | 25.0% |
| ! | AATTGATCATAAACAGGATA+TGG | - | chr6.4:43141897-43141916 | None:intergenic | 25.0% |
| ! | ACTAAAAAAATCAGACAACT+AGG | - | chr6.4:43140682-43140701 | None:intergenic | 25.0% |
| ! | ATATAAAGAGTGAATGAGTT+AGG | + | chr6.4:43142442-43142461 | MS.gene42924:intron | 25.0% |
| ! | ATGACTATGATTTATGCATT+TGG | + | chr6.4:43140939-43140958 | MS.gene42924:intron | 25.0% |
| ! | ATGGAATTATGTCAAAACAA+TGG | - | chr6.4:43143067-43143086 | None:intergenic | 25.0% |
| ! | CATATTCAAAAGAAGCTTAA+TGG | + | chr6.4:43141179-43141198 | MS.gene42924:intron | 25.0% |
| ! | CCTAAAATAATAAAGGAAAC+CGG | + | chr6.4:43142350-43142369 | MS.gene42924:intron | 25.0% |
| ! | CTCATAAATTGATCATAAAC+AGG | - | chr6.4:43141903-43141922 | None:intergenic | 25.0% |
| ! | GATGAAACCATCAAATAAAA+AGG | + | chr6.4:43143582-43143601 | MS.gene42924:intron | 25.0% |
| ! | GCAAAAACTGATAATAAACA+CGG | + | chr6.4:43142200-43142219 | MS.gene42924:intron | 25.0% |
| ! | TAAAAGATAGAATCAACTCA+AGG | - | chr6.4:43141776-43141795 | None:intergenic | 25.0% |
| ! | TAAATGTGAGTGATTAGATT+AGG | - | chr6.4:43141435-43141454 | None:intergenic | 25.0% |
| ! | TAACAAATATGTTTGGGTAT+TGG | - | chr6.4:43142628-43142647 | None:intergenic | 25.0% |
| ! | TATAAAGAGTGAATGAGTTA+GGG | + | chr6.4:43142443-43142462 | MS.gene42924:intron | 25.0% |
| ! | TCAAAATCATTCAACTTCAA+AGG | - | chr6.4:43139810-43139829 | None:intergenic | 25.0% |
| ! | TCTCATAATTCAGTATTTGT+CGG | - | chr6.4:43141931-43141950 | None:intergenic | 25.0% |
| ! | TGAAACCATCAAATAAAAAG+GGG | + | chr6.4:43143584-43143603 | MS.gene42924:intron | 25.0% |
| ! | TGGTAAAAAAAATGGTGAAA+TGG | - | chr6.4:43142535-43142554 | None:intergenic | 25.0% |
| ! | TTATGGCATATTGCTAAATA+AGG | + | chr6.4:43140575-43140594 | MS.gene42924:intron | 25.0% |
| ! | TTGATATCTAATGCATACAA+TGG | - | chr6.4:43142947-43142966 | None:intergenic | 25.0% |
| ! | TTTCAGAATATAGGCTTAAA+AGG | - | chr6.4:43141123-43141142 | None:intergenic | 25.0% |
| !! | AAAATACGTTGAATTTTGCT+GGG | + | chr6.4:43139568-43139587 | MS.gene42924:CDS | 25.0% |
| !! | ACGAAAATTGATGATAAACA+CGG | - | chr6.4:43141684-43141703 | None:intergenic | 25.0% |
| !! | AGATATTTATGTGCTTTTAC+AGG | + | chr6.4:43143611-43143630 | MS.gene42924:intron | 25.0% |
| !! | AGTTTTACTGTTACATTTGT+TGG | + | chr6.4:43139945-43139964 | MS.gene42924:intron | 25.0% |
| !! | ATTTTTCGCATTGAAATACT+AGG | - | chr6.4:43142049-43142068 | None:intergenic | 25.0% |
| !! | CATTAAGCTTCTTTTGAATA+TGG | - | chr6.4:43141181-43141200 | None:intergenic | 25.0% |
| !! | CTCTTCAAACATATATTTTG+AGG | - | chr6.4:43141994-43142013 | None:intergenic | 25.0% |
| !! | CTTCAATTTAAGATCTGAAA+GGG | - | chr6.4:43140091-43140110 | None:intergenic | 25.0% |
| !! | GATATTTATGTGCTTTTACA+GGG | + | chr6.4:43143612-43143631 | MS.gene42924:intron | 25.0% |
| !! | TAATTAACCTTTGTTGTAGA+AGG | + | chr6.4:43144027-43144046 | MS.gene42924:intron | 25.0% |
| !! | TCATGTTTATAATCGGTTTA+TGG | - | chr6.4:43141958-43141977 | None:intergenic | 25.0% |
| !! | TCTTCAATTTAAGATCTGAA+AGG | - | chr6.4:43140092-43140111 | None:intergenic | 25.0% |
| !! | TGGTAATAAAAAAAGTGCAA+TGG | + | chr6.4:43141370-43141389 | MS.gene42924:intron | 25.0% |
| !! | TTCAAGATTTCTGAAAATGT+TGG | + | chr6.4:43144318-43144337 | MS.gene42924:intron | 25.0% |
| !! | TTTATTATCAGTTTTTGCTG+TGG | - | chr6.4:43142198-43142217 | None:intergenic | 25.0% |
| !!! | AAGTTGAATGATTTTGATGA+AGG | + | chr6.4:43139813-43139832 | MS.gene42924:CDS | 25.0% |
| !!! | AATGACAGTTTTGATTTATC+TGG | + | chr6.4:43140750-43140769 | MS.gene42924:intron | 25.0% |
| !!! | ACTTAACTGGTTTTTCAATT+TGG | + | chr6.4:43141810-43141829 | MS.gene42924:intron | 25.0% |
| !!! | ATTATTTTTTTCCTCTACGA+GGG | + | chr6.4:43140198-43140217 | MS.gene42924:intron | 25.0% |
| !!! | CGGTTTCCTTTATTATTTTA+GGG | - | chr6.4:43142352-43142371 | None:intergenic | 25.0% |
| !!! | TATTATTTTTTTCCTCTACG+AGG | + | chr6.4:43140197-43140216 | MS.gene42924:intron | 25.0% |
| !!! | TTGATTTGGACTTTGTATTA+TGG | + | chr6.4:43140558-43140577 | MS.gene42924:intron | 25.0% |
| !!! | TTTGGATTTGATTTGATTCA+TGG | + | chr6.4:43140029-43140048 | MS.gene42924:intron | 25.0% |
| !!! | TTTGTTCATATTGACTTAAC+TGG | + | chr6.4:43141797-43141816 | MS.gene42924:intron | 25.0% |
| AAAATAGCAGTGAATCAACT+CGG | - | chr6.4:43143444-43143463 | None:intergenic | 30.0% | |
| AATTCTTTCAATGAAAGGGA+TGG | - | chr6.4:43143086-43143105 | None:intergenic | 30.0% | |
| ACAATTCTGATAGAGAACAT+AGG | + | chr6.4:43144252-43144271 | MS.gene42924:intron | 30.0% | |
| ACCGATAATATTACAACGAT+TGG | - | chr6.4:43141597-43141616 | None:intergenic | 30.0% | |
| ACTGATAATAAACACGGATA+TGG | + | chr6.4:43142206-43142225 | MS.gene42924:intron | 30.0% | |
| AGGGAAATTCTTTCAATGAA+AGG | - | chr6.4:43143091-43143110 | None:intergenic | 30.0% | |
| ATAAAGAGTGAATGAGTTAG+GGG | + | chr6.4:43142444-43142463 | MS.gene42924:intron | 30.0% | |
| ATATGATGATTTAGTGAAGC+AGG | + | chr6.4:43140850-43140869 | MS.gene42924:intron | 30.0% | |
| ATATGCATAAAGACAAAACC+AGG | - | chr6.4:43140834-43140853 | None:intergenic | 30.0% | |
| ATCTAATATTGGTATGACAC+CGG | - | chr6.4:43143237-43143256 | None:intergenic | 30.0% | |
| ATGATTGTCCCTTGTAAATA+TGG | + | chr6.4:43143127-43143146 | MS.gene42924:intron | 30.0% | |
| ATTAGATTAGGTCAACATCT+AGG | - | chr6.4:43141423-43141442 | None:intergenic | 30.0% | |
| ATTTGTAGTAAGCAATAGCA+TGG | + | chr6.4:43141730-43141749 | MS.gene42924:intron | 30.0% | |
| CATACAATGGCAGAAATAAA+AGG | - | chr6.4:43142934-43142953 | None:intergenic | 30.0% | |
| CCACTTAGCACATAAATAAT+AGG | - | chr6.4:43143033-43143052 | None:intergenic | 30.0% | |
| CCATTATCTACAAAATAGAC+AGG | - | chr6.4:43141028-43141047 | None:intergenic | 30.0% | |
| CCTATTATTTATGTGCTAAG+TGG | + | chr6.4:43143030-43143049 | MS.gene42924:intron | 30.0% | |
| GAAGAATTGAGAACTGATAT+TGG | + | chr6.4:43144572-43144591 | MS.gene42924:CDS | 30.0% | |
| GATCTTAAATTGAAGATGTG+TGG | + | chr6.4:43140096-43140115 | MS.gene42924:intron | 30.0% | |
| GCCAATCGTTGTAATATTAT+CGG | + | chr6.4:43141593-43141612 | MS.gene42924:intron | 30.0% | |
| GGGAAATTCTTTCAATGAAA+GGG | - | chr6.4:43143090-43143109 | None:intergenic | 30.0% | |
| GTATAATCTGTGATGTGAAA+AGG | + | chr6.4:43140608-43140627 | MS.gene42924:intron | 30.0% | |
| GTCATAAGCCATATTTACAA+GGG | - | chr6.4:43143138-43143157 | None:intergenic | 30.0% | |
| TAACTAACTAACCAGATCAA+AGG | - | chr6.4:43139892-43139911 | None:intergenic | 30.0% | |
| TAATATGAGATGATGTAGGA+GGG | - | chr6.4:43144535-43144554 | None:intergenic | 30.0% | |
| TATATCCCTGCTAAAGAAAT+AGG | - | chr6.4:43142828-43142847 | None:intergenic | 30.0% | |
| TATGATGATTTAGTGAAGCA+GGG | + | chr6.4:43140851-43140870 | MS.gene42924:intron | 30.0% | |
| TGAATGTGTTTGTACTTCAT+AGG | - | chr6.4:43143160-43143179 | None:intergenic | 30.0% | |
| TGGCATTCAAATAAGTTTGT+AGG | - | chr6.4:43141161-43141180 | None:intergenic | 30.0% | |
| TGTTGTTAGCATTTCTTACT+AGG | - | chr6.4:43143467-43143486 | None:intergenic | 30.0% | |
| TTAATATGAGATGATGTAGG+AGG | - | chr6.4:43144536-43144555 | None:intergenic | 30.0% | |
| TTAGTAGTAAGTACTAGCAA+TGG | - | chr6.4:43142153-43142172 | None:intergenic | 30.0% | |
| TTATCGGTAAACTTTCGTTA+AGG | + | chr6.4:43141609-43141628 | MS.gene42924:intron | 30.0% | |
| TTCATCTAGTGCTGTAATTA+GGG | - | chr6.4:43143568-43143587 | None:intergenic | 30.0% | |
| TTCTTCATTGCAGAATGTAA+TGG | + | chr6.4:43140719-43140738 | MS.gene42924:intron | 30.0% | |
| TTGAACGTAATTACATGTGT+CGG | + | chr6.4:43143922-43143941 | MS.gene42924:intron | 30.0% | |
| TTTCATCTAGTGCTGTAATT+AGG | - | chr6.4:43143569-43143588 | None:intergenic | 30.0% | |
| TTTGATTCATGGTTTAGAAG+TGG | + | chr6.4:43140040-43140059 | MS.gene42924:intron | 30.0% | |
| ! | AAAAAACGGATCGGAAATTT+TGG | - | chr6.4:43142555-43142574 | None:intergenic | 30.0% |
| ! | ATGGAAGAAAGAGAGATTTT+TGG | + | chr6.4:43139492-43139511 | MS.gene42924:CDS | 30.0% |
| ! | ATTATACAACCATTTTCCCT+TGG | - | chr6.4:43143343-43143362 | None:intergenic | 30.0% |
| ! | ATTGATGATAAACACGGATA+TGG | - | chr6.4:43141678-43141697 | None:intergenic | 30.0% |
| ! | ATTTTCCTATGACCTGTTTT+AGG | + | chr6.4:43142660-43142679 | MS.gene42924:intron | 30.0% |
| ! | CAAAATACGTTGAATTTTGC+TGG | + | chr6.4:43139567-43139586 | MS.gene42924:CDS | 30.0% |
| ! | CCGGTTTCCTTTATTATTTT+AGG | - | chr6.4:43142353-43142372 | None:intergenic | 30.0% |
| ! | CCTGTCTATTTTGTAGATAA+TGG | + | chr6.4:43141025-43141044 | MS.gene42924:intron | 30.0% |
| ! | GGCTTCTTAATTGATTCAAA+TGG | - | chr6.4:43139789-43139808 | None:intergenic | 30.0% |
| ! | GTTATTTCCTTCTACAACAA+AGG | - | chr6.4:43144037-43144056 | None:intergenic | 30.0% |
| ! | TACATTTTGTTAAATGCCAG+TGG | + | chr6.4:43141234-43141253 | MS.gene42924:intron | 30.0% |
| ! | TCATTCCTATTTCTTTAGCA+GGG | + | chr6.4:43142820-43142839 | MS.gene42924:intron | 30.0% |
| ! | TTCATTCCTATTTCTTTAGC+AGG | + | chr6.4:43142819-43142838 | MS.gene42924:intron | 30.0% |
| ! | TTTTCTGTCATAGTAATGTG+AGG | + | chr6.4:43140135-43140154 | MS.gene42924:intron | 30.0% |
| !! | GATGAAGGTAATTTTGATGA+AGG | + | chr6.4:43139828-43139847 | MS.gene42924:CDS | 30.0% |
| !! | TCTTCAAACGTCTTATTTCT+AGG | - | chr6.4:43142240-43142259 | None:intergenic | 30.0% |
| !!! | AAAGAGAGATTTTTGGTTCT+GGG | + | chr6.4:43139499-43139518 | MS.gene42924:CDS | 30.0% |
| !!! | AAGGGATTAGTTTTTATCAG+GGG | + | chr6.4:43140423-43140442 | MS.gene42924:intron | 30.0% |
| !!! | GAAGGGATTAGTTTTTATCA+GGG | + | chr6.4:43140422-43140441 | MS.gene42924:intron | 30.0% |
| !!! | GGTTTTAACTTTGCTTCTTT+TGG | + | chr6.4:43144623-43144642 | MS.gene42924:CDS | 30.0% |
| !!! | TGAAGGGATTAGTTTTTATC+AGG | + | chr6.4:43140421-43140440 | MS.gene42924:intron | 30.0% |
| AAATTGAAGATGTGTGGTGT+TGG | + | chr6.4:43140102-43140121 | MS.gene42924:intron | 35.0% | |
| AATATCATTTACCCTCGTAG+AGG | - | chr6.4:43140212-43140231 | None:intergenic | 35.0% | |
| AATATGAGATGATGTAGGAG+GGG | - | chr6.4:43144534-43144553 | None:intergenic | 35.0% | |
| ACATCTTCGATCTTAAGTGT+CGG | + | chr6.4:43143281-43143300 | MS.gene42924:intron | 35.0% | |
| AGTGAGGTGTAATTGAAAGT+TGG | + | chr6.4:43142403-43142422 | MS.gene42924:intron | 35.0% | |
| ATCTCATGCTTCATATGCAA+TGG | - | chr6.4:43142300-43142319 | None:intergenic | 35.0% | |
| ATGAAGCATGAGATTGGAAT+TGG | + | chr6.4:43142306-43142325 | MS.gene42924:intron | 35.0% | |
| ATTTAACACCAATGCATGTG+TGG | + | chr6.4:43142897-43142916 | MS.gene42924:intron | 35.0% | |
| CAAAAATAGTGTCACATAGC+GGG | + | chr6.4:43143514-43143533 | MS.gene42924:intron | 35.0% | |
| CACGTGTCTGTATCTAATAT+TGG | - | chr6.4:43143248-43143267 | None:intergenic | 35.0% | |
| CATGTGCTTACTGTAAATTC+TGG | + | chr6.4:43141079-43141098 | MS.gene42924:CDS | 35.0% | |
| CCAAAAATAGTGTCACATAG+CGG | + | chr6.4:43143513-43143532 | MS.gene42924:intron | 35.0% | |
| GAATTGAGAACTGATATTGG+TGG | + | chr6.4:43144575-43144594 | MS.gene42924:CDS | 35.0% | |
| GCAATTAACAATGAGCATGA+CGG | - | chr6.4:43142513-43142532 | None:intergenic | 35.0% | |
| GCTACATTGTATTGTACTTG+TGG | + | chr6.4:43143305-43143324 | MS.gene42924:intron | 35.0% | |
| GCTGTAATTAGGGGAAAAAA+TGG | - | chr6.4:43143558-43143577 | None:intergenic | 35.0% | |
| GGTCATAAGCCATATTTACA+AGG | - | chr6.4:43143139-43143158 | None:intergenic | 35.0% | |
| GTGAAGTTAGAGCAAGTTAA+TGG | - | chr6.4:43143420-43143439 | None:intergenic | 35.0% | |
| GTTGTAGAAGGAAATAACAC+TGG | + | chr6.4:43144039-43144058 | MS.gene42924:intron | 35.0% | |
| TAAAGAGTGAATGAGTTAGG+GGG | + | chr6.4:43142445-43142464 | MS.gene42924:intron | 35.0% | |
| TATGTGCTACCAGAAAAAAG+TGG | + | chr6.4:43141333-43141352 | MS.gene42924:intron | 35.0% | |
| TATTAGATACAGACACGTGT+TGG | + | chr6.4:43143249-43143268 | MS.gene42924:intron | 35.0% | |
| TCATCTAGTGCTGTAATTAG+GGG | - | chr6.4:43143567-43143586 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGA+CGG | - | chr6.4:43140308-43140327 | None:intergenic | 35.0% | |
| TGAAAGGGAATCTAAGCTAA+GGG | - | chr6.4:43140076-43140095 | None:intergenic | 35.0% | |
| TGATGCGTAAAACAATGAGA+GGG | - | chr6.4:43144437-43144456 | None:intergenic | 35.0% | |
| TGTCATGTCTAGTGTTTCAT+AGG | + | chr6.4:43140514-43140533 | MS.gene42924:intron | 35.0% | |
| TTGCATATGAAGCATGAGAT+TGG | + | chr6.4:43142300-43142319 | MS.gene42924:intron | 35.0% | |
| TTTCCAACCTGAAAAATCTC+CGG | - | chr6.4:43139733-43139752 | None:intergenic | 35.0% | |
| TTTGTCAATCCATTCTCAGT+TGG | - | chr6.4:43143675-43143694 | None:intergenic | 35.0% | |
| ! | AACTTTGCTTCTTTTGGCAA+TGG | + | chr6.4:43144629-43144648 | MS.gene42924:CDS | 35.0% |
| ! | ATGAAGACGTTTCAAGTCAT+CGG | + | chr6.4:43140785-43140804 | MS.gene42924:intron | 35.0% |
| ! | TGAAGGTACATGACAATTTC+AGG | + | chr6.4:43139845-43139864 | MS.gene42924:intron | 35.0% |
| ! | TTTTGTTAAATGCCAGTGGT+CGG | + | chr6.4:43141238-43141257 | MS.gene42924:intron | 35.0% |
| !! | GATAATGGAATATCACCCTT+CGG | + | chr6.4:43141040-43141059 | MS.gene42924:intron | 35.0% |
| !! | TGTCACCCCTTTTTATTTGA+TGG | - | chr6.4:43143592-43143611 | None:intergenic | 35.0% |
| !!! | AAGCACATGCGTTTTGAAAT+TGG | - | chr6.4:43141068-43141087 | None:intergenic | 35.0% |
| !!! | GAAAGAGAGATTTTTGGTTC+TGG | + | chr6.4:43139498-43139517 | MS.gene42924:CDS | 35.0% |
| !!! | GATTTTTCAGGTTGGAAAAG+TGG | + | chr6.4:43139735-43139754 | MS.gene42924:CDS | 35.0% |
| !!! | GCTATTTTTAGCCTTTGATC+TGG | + | chr6.4:43139878-43139897 | MS.gene42924:intron | 35.0% |
| !!! | GTTTTGAAATTGGAACCGAA+GGG | - | chr6.4:43141058-43141077 | None:intergenic | 35.0% |
| !!! | TGTGACACTATTTTTGGTGT+TGG | - | chr6.4:43143510-43143529 | None:intergenic | 35.0% |
| AATGAAGCCTATCATGTCAC+CGG | + | chr6.4:43144598-43144617 | MS.gene42924:CDS | 40.0% | |
| AGTCCAAATCAATATCCTGC+AGG | - | chr6.4:43140550-43140569 | None:intergenic | 40.0% | |
| ATAGGCAATAATTGTCCTGC+AGG | + | chr6.4:43140532-43140551 | MS.gene42924:intron | 40.0% | |
| ATATCCATTCTGTCTGCTAC+TGG | + | chr6.4:43142730-43142749 | MS.gene42924:CDS | 40.0% | |
| ATGGCAATTAACAGAGAGTG+TGG | + | chr6.4:43141389-43141408 | MS.gene42924:intron | 40.0% | |
| ATTAGGTCAACATCTAGGTC+TGG | - | chr6.4:43141418-43141437 | None:intergenic | 40.0% | |
| CATCTTCGATCTTAAGTGTC+GGG | + | chr6.4:43143282-43143301 | MS.gene42924:intron | 40.0% | |
| CGGAAATCGAGCTAATTGAA+GGG | + | chr6.4:43140240-43140259 | MS.gene42924:intron | 40.0% | |
| CTGAAAGGGAATCTAAGCTA+AGG | - | chr6.4:43140077-43140096 | None:intergenic | 40.0% | |
| CTGAAGCATGAGATTGGAAT+TGG | - | chr6.4:43141563-43141582 | None:intergenic | 40.0% | |
| CTGATGCGTAAAACAATGAG+AGG | - | chr6.4:43144438-43144457 | None:intergenic | 40.0% | |
| CTGGTAGCACATACAAAGAA+GGG | - | chr6.4:43141326-43141345 | None:intergenic | 40.0% | |
| CTGTCATAGTAATGTGAGGT+CGG | + | chr6.4:43140139-43140158 | MS.gene42924:intron | 40.0% | |
| CTGTGATGTGAAAAGGATGA+TGG | + | chr6.4:43140615-43140634 | MS.gene42924:intron | 40.0% | |
| CTTCCAGATTCACTCTTTCT+AGG | - | chr6.4:43139663-43139682 | None:intergenic | 40.0% | |
| GACATCCTAAAACAGGTCAT+AGG | - | chr6.4:43142668-43142687 | None:intergenic | 40.0% | |
| GCAACAATTCCAAGGGAAAA+TGG | + | chr6.4:43143331-43143350 | MS.gene42924:intron | 40.0% | |
| GCATGCTGTTAATGTTAACC+AGG | + | chr6.4:43139521-43139540 | MS.gene42924:CDS | 40.0% | |
| GTAGTAAGTACTAGCAATGG+CGG | - | chr6.4:43142150-43142169 | None:intergenic | 40.0% | |
| GTCTGTGCTTCATAGTTGAA+GGG | + | chr6.4:43140405-43140424 | MS.gene42924:intron | 40.0% | |
| TCATCGAGACATCCTAAAAC+AGG | - | chr6.4:43142675-43142694 | None:intergenic | 40.0% | |
| TCATTTGTGCCAACTGAGAA+TGG | + | chr6.4:43143663-43143682 | MS.gene42924:CDS | 40.0% | |
| TCGGAAATCGAGCTAATTGA+AGG | + | chr6.4:43140239-43140258 | MS.gene42924:intron | 40.0% | |
| TCTGGTAGCACATACAAAGA+AGG | - | chr6.4:43141327-43141346 | None:intergenic | 40.0% | |
| TGGTAGAATGAGTGTCTCAT+TGG | + | chr6.4:43143704-43143723 | MS.gene42924:CDS | 40.0% | |
| TGGTAGCACATACAAAGAAG+GGG | - | chr6.4:43141325-43141344 | None:intergenic | 40.0% | |
| TGGTTTAGAAGTGGTATGTG+TGG | + | chr6.4:43140049-43140068 | MS.gene42924:intron | 40.0% | |
| TGTCTAAACCACACATGCAT+TGG | - | chr6.4:43142908-43142927 | None:intergenic | 40.0% | |
| TGTCTGTGCTTCATAGTTGA+AGG | + | chr6.4:43140404-43140423 | MS.gene42924:intron | 40.0% | |
| TTCGAGATTCTTTCCTTGAG+CGG | + | chr6.4:43143639-43143658 | MS.gene42924:CDS | 40.0% | |
| TTGAATGTAACCACATGTGC+CGG | + | chr6.4:43143215-43143234 | MS.gene42924:intron | 40.0% | |
| ! | AAGTGGTCCGACAATTTTTG+TGG | + | chr6.4:43141350-43141369 | MS.gene42924:intron | 40.0% |
| ! | ATCTTCGATCTTAAGTGTCG+GGG | + | chr6.4:43143283-43143302 | MS.gene42924:intron | 40.0% |
| ! | CCGCTATGTGACACTATTTT+TGG | - | chr6.4:43143516-43143535 | None:intergenic | 40.0% |
| ! | GCTTACTGTAAATTCTGGAG+AGG | + | chr6.4:43141084-43141103 | MS.gene42924:CDS | 40.0% |
| ! | GTCCAAATGGTCGTGTTTTT+GGG | + | chr6.4:43143730-43143749 | MS.gene42924:CDS | 40.0% |
| ! | TCGTATCTGAAGCATGAGAT+TGG | - | chr6.4:43141569-43141588 | None:intergenic | 40.0% |
| ! | TGTCCTGCAGGATATTGATT+TGG | + | chr6.4:43140544-43140563 | MS.gene42924:intron | 40.0% |
| ! | TTTTGAGCCAAATTGAAGCC+AGG | - | chr6.4:43139552-43139571 | None:intergenic | 40.0% |
| !! | CAAGAGAATAGCATTGACAC+AGG | - | chr6.4:43141837-43141856 | None:intergenic | 40.0% |
| !! | CTCTCATTGTTTTACGCATC+AGG | + | chr6.4:43144436-43144455 | MS.gene42924:intron | 40.0% |
| !! | TCCAAATGGTCGTGTTTTTG+GGG | + | chr6.4:43143731-43143750 | MS.gene42924:CDS | 40.0% |
| !! | TTGTTTTACGCATCAGGTTG+TGG | + | chr6.4:43144442-43144461 | MS.gene42924:intron | 40.0% |
| !!! | ATTGTCGGACCACTTTTTTC+TGG | - | chr6.4:43141345-43141364 | None:intergenic | 40.0% |
| !!! | CGTTTTGAAATTGGAACCGA+AGG | - | chr6.4:43141059-43141078 | None:intergenic | 40.0% |
| !!! | TGCGAGTTTTTTTCCAGAGA+AGG | + | chr6.4:43144466-43144485 | MS.gene42924:CDS | 40.0% |
| !!! | TTTTCAGGTTGGAAAAGTGG+TGG | + | chr6.4:43139738-43139757 | MS.gene42924:CDS | 40.0% |
| AAAATCTCCGGTCAACGGAA+TGG | - | chr6.4:43139721-43139740 | None:intergenic | 45.0% | |
| AACGGAATGGAAGCCGAAAT+TGG | - | chr6.4:43139708-43139727 | None:intergenic | 45.0% | |
| ACAAACACATTCACCGACAC+AGG | + | chr6.4:43143167-43143186 | MS.gene42924:intron | 45.0% | |
| AGAATGAGTGTCTCATTGGC+AGG | + | chr6.4:43143708-43143727 | MS.gene42924:CDS | 45.0% | |
| AGGCCTAGAAAGAGTGAATC+TGG | + | chr6.4:43139657-43139676 | MS.gene42924:CDS | 45.0% | |
| ATGGAAGCCGAAATTGGCAT+CGG | - | chr6.4:43139702-43139721 | None:intergenic | 45.0% | |
| CAGAGAAGGAGAATCCAAAG+AGG | + | chr6.4:43144480-43144499 | MS.gene42924:CDS | 45.0% | |
| CCTGAAAAATCTCCGGTCAA+CGG | - | chr6.4:43139726-43139745 | None:intergenic | 45.0% | |
| CTCTTTGGATTCTCCTTCTC+TGG | - | chr6.4:43144482-43144501 | None:intergenic | 45.0% | |
| GAAGCAAAGTTAAAACCGGC+CGG | - | chr6.4:43144620-43144639 | None:intergenic | 45.0% | |
| GAATGTAACACTTCGCCAGT+CGG | + | chr6.4:43142762-43142781 | MS.gene42924:CDS | 45.0% | |
| GAGTGAATCTGGAAGTAAGC+CGG | + | chr6.4:43139668-43139687 | MS.gene42924:CDS | 45.0% | |
| GCAACGACAGTTCAGATTGA+AGG | - | chr6.4:43143971-43143990 | None:intergenic | 45.0% | |
| GGATTGACAAAGAGCAGATC+TGG | + | chr6.4:43143684-43143703 | MS.gene42924:CDS | 45.0% | |
| GGTTGGAGTATGATTGAGTG+AGG | + | chr6.4:43142387-43142406 | MS.gene42924:intron | 45.0% | |
| GGTTGGAGTATGATTGAGTG+AGG | - | chr6.4:43142406-43142387 | None:intergenic | 45.0% | |
| GTGGCATGCAACAATTCCAA+GGG | + | chr6.4:43143324-43143343 | MS.gene42924:intron | 45.0% | |
| GTTGTCACCGATGCCAATTT+CGG | + | chr6.4:43139692-43139711 | MS.gene42924:CDS | 45.0% | |
| TCTGTGTCTAATGCATCACC+TGG | + | chr6.4:43140813-43140832 | MS.gene42924:intron | 45.0% | |
| TGACACTCACACATCAACAC+CGG | - | chr6.4:43140499-43140518 | None:intergenic | 45.0% | |
| TGGTGGTACTTCAACGTATG+AGG | + | chr6.4:43142792-43142811 | MS.gene42924:CDS | 45.0% | |
| TGTGGAGGTGAAGAAGAAGA+GGG | + | chr6.4:43139632-43139651 | MS.gene42924:CDS | 45.0% | |
| TGTGGCATGCAACAATTCCA+AGG | + | chr6.4:43143323-43143342 | MS.gene42924:intron | 45.0% | |
| ! | AAGATGTGTGGTGTTGGAAG+GGG | + | chr6.4:43140108-43140127 | MS.gene42924:intron | 45.0% |
| ! | GAAGATGTGTGGTGTTGGAA+GGG | + | chr6.4:43140107-43140126 | MS.gene42924:intron | 45.0% |
| ! | GCAATTAACAGAGAGTGTGG+TGG | + | chr6.4:43141392-43141411 | MS.gene42924:intron | 45.0% |
| ! | GGTCCAAATGGTCGTGTTTT+TGG | + | chr6.4:43143729-43143748 | MS.gene42924:CDS | 45.0% |
| ! | GTTCAGATTGAAGGCGTGTT+CGG | - | chr6.4:43143962-43143981 | None:intergenic | 45.0% |
| ! | TGAAGATGTGTGGTGTTGGA+AGG | + | chr6.4:43140106-43140125 | MS.gene42924:intron | 45.0% |
| ! | TTGAATTTTGCTGGGTCCAC+TGG | + | chr6.4:43139576-43139595 | MS.gene42924:CDS | 45.0% |
| !! | AATTTGCTGAGCAGTGGCAA+GGG | - | chr6.4:43141525-43141544 | None:intergenic | 45.0% |
| !! | ACACTGGTGCTGATTGATGA+TGG | + | chr6.4:43144055-43144074 | MS.gene42924:intron | 45.0% |
| !! | GAGAACAATTTGCTGAGCAG+TGG | - | chr6.4:43141531-43141550 | None:intergenic | 45.0% |
| !! | TGAACTATGAAGCACTGACG+TGG | + | chr6.4:43143843-43143862 | MS.gene42924:intron | 45.0% |
| !!! | CCAAATGGTCGTGTTTTTGG+GGG | + | chr6.4:43143732-43143751 | MS.gene42924:CDS | 45.0% |
| !!! | TGACCGGAGATTTTTCAGGT+TGG | + | chr6.4:43139727-43139746 | MS.gene42924:CDS | 45.0% |
| !!! | AAATATCATATATTTTAAAA+AGG | - | chr6.4:43141302-43141321 | None:intergenic | 5.0% |
| !!! | AATATCATATATTTTAAAAA+GGG | - | chr6.4:43141301-43141320 | None:intergenic | 5.0% |
| AAACCGGCAGCAAGAGAAAG+GGG | + | chr6.4:43142366-43142385 | MS.gene42924:intron | 50.0% | |
| ACACGACACATGTCCGATAC+CGG | + | chr6.4:43140361-43140380 | MS.gene42924:intron | 50.0% | |
| AGCCAAATTGAAGCCAGGTG+GGG | - | chr6.4:43139547-43139566 | None:intergenic | 50.0% | |
| AGGAGAATCCAAAGAGGCAG+AGG | + | chr6.4:43144486-43144505 | MS.gene42924:CDS | 50.0% | |
| AGTGGCAAGGGAAAGGGAAA+GGG | - | chr6.4:43141513-43141532 | None:intergenic | 50.0% | |
| ATGATGAGTTGCCAGAGCCT+TGG | - | chr6.4:43144655-43144674 | None:intergenic | 50.0% | |
| CCCCCAAAAACACGACCATT+TGG | - | chr6.4:43143735-43143754 | None:intergenic | 50.0% | |
| GAAACCGGCAGCAAGAGAAA+GGG | + | chr6.4:43142365-43142384 | MS.gene42924:intron | 50.0% | |
| GAGCCAAATTGAAGCCAGGT+GGG | - | chr6.4:43139548-43139567 | None:intergenic | 50.0% | |
| GCACAGACACTCCTCAGATA+AGG | - | chr6.4:43140393-43140412 | None:intergenic | 50.0% | |
| GGAGAATCCAAAGAGGCAGA+GGG | + | chr6.4:43144487-43144506 | MS.gene42924:CDS | 50.0% | |
| GTCTCATTGGCAGGTCCAAA+TGG | + | chr6.4:43143717-43143736 | MS.gene42924:CDS | 50.0% | |
| GTGGAGGTGAAGAAGAAGAG+GGG | + | chr6.4:43139633-43139652 | MS.gene42924:CDS | 50.0% | |
| GTGTGGAGGTGAAGAAGAAG+AGG | + | chr6.4:43139631-43139650 | MS.gene42924:CDS | 50.0% | |
| GTTAAATGCCAGTGGTCGGT+GGG | + | chr6.4:43141242-43141261 | MS.gene42924:intron | 50.0% | |
| TGAGCCAAATTGAAGCCAGG+TGG | - | chr6.4:43139549-43139568 | None:intergenic | 50.0% | |
| TGTGCCAGTAGCAGACAGAA+TGG | - | chr6.4:43142737-43142756 | None:intergenic | 50.0% | |
| TGTTAAATGCCAGTGGTCGG+TGG | + | chr6.4:43141241-43141260 | MS.gene42924:intron | 50.0% | |
| TTAAATGCCAGTGGTCGGTG+GGG | + | chr6.4:43141243-43141262 | MS.gene42924:intron | 50.0% | |
| ! | CCGTTGACCGGAGATTTTTC+AGG | + | chr6.4:43139723-43139742 | MS.gene42924:CDS | 50.0% |
| ! | GCTTCTTTTGGCAATGGCCA+AGG | + | chr6.4:43144635-43144654 | MS.gene42924:CDS | 50.0% |
| !! | ATGAAGCACTGACGTGGACA+TGG | + | chr6.4:43143849-43143868 | MS.gene42924:intron | 50.0% |
| !! | CAATTTGCTGAGCAGTGGCA+AGG | - | chr6.4:43141526-43141545 | None:intergenic | 50.0% |
| !! | GGTGCTGATTGATGATGGCA+AGG | + | chr6.4:43144060-43144079 | MS.gene42924:intron | 50.0% |
| !! | TCAGGTTGGAAAAGTGGTGG+TGG | + | chr6.4:43139741-43139760 | MS.gene42924:CDS | 50.0% |
| AAACCGGCCGGTGACATGAT+AGG | - | chr6.4:43144608-43144627 | None:intergenic | 55.0% | |
| AAGCCTATCATGTCACCGGC+CGG | + | chr6.4:43144602-43144621 | MS.gene42924:CDS | 55.0% | |
| AATGTTAACCAGGCCCCACC+TGG | + | chr6.4:43139531-43139550 | MS.gene42924:CDS | 55.0% | |
| ACTGACGTGGACATGGACAC+GGG | + | chr6.4:43143856-43143875 | MS.gene42924:intron | 55.0% | |
| AGGTGAAGAAGAAGAGGGGC+AGG | + | chr6.4:43139637-43139656 | MS.gene42924:CDS | 55.0% | |
| CAACCCCTTTCTCTTGCTGC+CGG | - | chr6.4:43142372-43142391 | None:intergenic | 55.0% | |
| CAAGGGAAAGGGAAAGGGGT+TGG | - | chr6.4:43141508-43141527 | None:intergenic | 55.0% | |
| CACGAACACCAGACACGACA+CGG | + | chr6.4:43140271-43140290 | MS.gene42924:intron | 55.0% | |
| CACGACACATGTCCGATACC+GGG | + | chr6.4:43140362-43140381 | MS.gene42924:intron | 55.0% | |
| CACTGACGTGGACATGGACA+CGG | + | chr6.4:43143855-43143874 | MS.gene42924:intron | 55.0% | |
| CAGTGGCAAGGGAAAGGGAA+AGG | - | chr6.4:43141514-43141533 | None:intergenic | 55.0% | |
| CTGAGCAGTGGCAAGGGAAA+GGG | - | chr6.4:43141519-43141538 | None:intergenic | 55.0% | |
| CTTCTTCACCTCCACACCAC+CGG | - | chr6.4:43139628-43139647 | None:intergenic | 55.0% | |
| GAGGCAGAGGGTCGATCATT+CGG | + | chr6.4:43144499-43144518 | MS.gene42924:CDS | 55.0% | |
| GATAAGGCGTGTCCCGGTAT+CGG | - | chr6.4:43140377-43140396 | None:intergenic | 55.0% | |
| GATGATGTAGGAGGGGCAGT+TGG | - | chr6.4:43144527-43144546 | None:intergenic | 55.0% | |
| GGAAACCGGCAGCAAGAGAA+AGG | + | chr6.4:43142364-43142383 | MS.gene42924:intron | 55.0% | |
| GTCAATGTCCGTGTCGTGTC+TGG | - | chr6.4:43140282-43140301 | None:intergenic | 55.0% | |
| GTGGCAAGGGAAAGGGAAAG+GGG | - | chr6.4:43141512-43141531 | None:intergenic | 55.0% | |
| TACCACCACAAGCATCCGAC+TGG | - | chr6.4:43142780-43142799 | None:intergenic | 55.0% | |
| TCCTCAGATAAGGCGTGTCC+CGG | - | chr6.4:43140383-43140402 | None:intergenic | 55.0% | |
| TCGGCTTCCATTCCGTTGAC+CGG | + | chr6.4:43139711-43139730 | MS.gene42924:CDS | 55.0% | |
| TGATCGACCCTCTGCCTCTT+TGG | - | chr6.4:43144497-43144516 | None:intergenic | 55.0% | |
| TGGCACAAATGAGCCGCTCA+AGG | - | chr6.4:43143655-43143674 | None:intergenic | 55.0% | |
| TGGGTCCACTGGAGAGTTAC+CGG | + | chr6.4:43139587-43139606 | MS.gene42924:CDS | 55.0% | |
| TGGTATGACACCGGCACATG+TGG | - | chr6.4:43143228-43143247 | None:intergenic | 55.0% | |
| TTTGGCAATGGCCAAGGCTC+TGG | + | chr6.4:43144641-43144660 | MS.gene42924:CDS | 55.0% | |
| !! | AAAAGTGGTGGTGGTGGAGG+TGG | + | chr6.4:43139750-43139769 | MS.gene42924:CDS | 55.0% |
| !! | ATTGGCATCGGTGACAACGC+CGG | - | chr6.4:43139690-43139709 | None:intergenic | 55.0% |
| !! | GGTTGGAAAAGTGGTGGTGG+TGG | + | chr6.4:43139744-43139763 | MS.gene42924:CDS | 55.0% |
| !! | TGGAAAAGTGGTGGTGGTGG+AGG | + | chr6.4:43139747-43139766 | MS.gene42924:CDS | 55.0% |
| !!! | TCGTGTTTTTGGGGGTGCAC+TGG | + | chr6.4:43143740-43143759 | MS.gene42924:CDS | 55.0% |
| AATTGAAGCCAGGTGGGGCC+TGG | - | chr6.4:43139542-43139561 | None:intergenic | 60.0% | |
| ACCGGGACACGCCTTATCTG+AGG | + | chr6.4:43140379-43140398 | MS.gene42924:intron | 60.0% | |
| CGGCAGCAAGAGAAAGGGGT+TGG | + | chr6.4:43142370-43142389 | MS.gene42924:intron | 60.0% | |
| CTTCGCCAGTCGGATGCTTG+TGG | + | chr6.4:43142772-43142791 | MS.gene42924:CDS | 60.0% | |
| GCTGAGCAGTGGCAAGGGAA+AGG | - | chr6.4:43141520-43141539 | None:intergenic | 60.0% | |
| GGCCCCACCTGGCTTCAATT+TGG | + | chr6.4:43139542-43139561 | MS.gene42924:CDS | 60.0% | |
| !! | CACTGGAGAGTTACCGGCTC+CGG | + | chr6.4:43139593-43139612 | MS.gene42924:CDS | 60.0% |
| !! | GCTGGTTTGCTGGTAGCTGC+TGG | + | chr6.4:43143762-43143781 | MS.gene42924:CDS | 60.0% |
| !! | GTTTTTGGGGGTGCACTGGC+TGG | + | chr6.4:43143744-43143763 | MS.gene42924:CDS | 60.0% |
| ATGCCAGTGGTCGGTGGGGT+TGG | + | chr6.4:43141247-43141266 | MS.gene42924:intron | 65.0% | |
| CGCCAGTCGGATGCTTGTGG+TGG | + | chr6.4:43142775-43142794 | MS.gene42924:CDS | 65.0% | |
| CGGAGCCGGTAACTCTCCAG+TGG | - | chr6.4:43139595-43139614 | None:intergenic | 65.0% | |
| GAACCAACCCCACCGACCAC+TGG | - | chr6.4:43141253-43141272 | None:intergenic | 65.0% | |
| !! | AGAGTTACCGGCTCCGGTGC+CGG | + | chr6.4:43139599-43139618 | MS.gene42924:CDS | 65.0% |
| !! | AGTGGTGGTGGTGGAGGTGG+AGG | + | chr6.4:43139753-43139772 | MS.gene42924:CDS | 65.0% |
| !! | GGGTGCACTGGCTGGTTTGC+TGG | + | chr6.4:43143752-43143771 | MS.gene42924:CDS | 65.0% |
| ACCTCCACACCACCGGCAGC+CGG | - | chr6.4:43139621-43139640 | None:intergenic | 70.0% | |
| !! | GGTCGGTGGGGTTGGTTCCC+TGG | + | chr6.4:43141255-43141274 | MS.gene42924:intron | 70.0% |
| ACACCACCGGCAGCCGGCAC+CGG | - | chr6.4:43139615-43139634 | None:intergenic | 75.0% | |
| ! | GCCGGCTGCCGGTGGTGTGG+AGG | + | chr6.4:43139617-43139636 | MS.gene42924:CDS | 80.0% |
| !!! | GGTGCCGGCTGCCGGTGGTG+TGG | + | chr6.4:43139614-43139633 | MS.gene42924:CDS | 80.0% |
| !! | CCGGCAGCCGGCACCGGAGC+CGG | - | chr6.4:43139609-43139628 | None:intergenic | 85.0% |
| !!! | CCGGCTCCGGTGCCGGCTGC+CGG | + | chr6.4:43139606-43139625 | MS.gene42924:CDS | 85.0% |
| !!! | GCTCCGGTGCCGGCTGCCGG+TGG | + | chr6.4:43139609-43139628 | MS.gene42924:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 43139492 | 43144700 | 43139492 | ID=MS.gene42924 |
| chr6.4 | mRNA | 43139492 | 43144700 | 43139492 | ID=MS.gene42924.t1;Parent=MS.gene42924 |
| chr6.4 | exon | 43139492 | 43139849 | 43139492 | ID=MS.gene42924.t1.exon1;Parent=MS.gene42924.t1 |
| chr6.4 | CDS | 43139492 | 43139849 | 43139492 | ID=cds.MS.gene42924.t1;Parent=MS.gene42924.t1 |
| chr6.4 | exon | 43141041 | 43141105 | 43141041 | ID=MS.gene42924.t1.exon2;Parent=MS.gene42924.t1 |
| chr6.4 | CDS | 43141041 | 43141105 | 43141041 | ID=cds.MS.gene42924.t1;Parent=MS.gene42924.t1 |
| chr6.4 | exon | 43142682 | 43142813 | 43142682 | ID=MS.gene42924.t1.exon3;Parent=MS.gene42924.t1 |
| chr6.4 | CDS | 43142682 | 43142813 | 43142682 | ID=cds.MS.gene42924.t1;Parent=MS.gene42924.t1 |
| chr6.4 | exon | 43143633 | 43143794 | 43143633 | ID=MS.gene42924.t1.exon4;Parent=MS.gene42924.t1 |
| chr6.4 | CDS | 43143633 | 43143794 | 43143633 | ID=cds.MS.gene42924.t1;Parent=MS.gene42924.t1 |
| chr6.4 | exon | 43144458 | 43144700 | 43144458 | ID=MS.gene42924.t1.exon5;Parent=MS.gene42924.t1 |
| chr6.4 | CDS | 43144458 | 43144700 | 43144458 | ID=cds.MS.gene42924.t1;Parent=MS.gene42924.t1 |
| Gene Sequence |
| Protein sequence |
