Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43375.t1 | XP_003626551.2 | 81.4 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 2.50E-278 | 967.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43375.t1 | A0A1J6KGJ9 | 67.3 | 569 | 180 | 3 | 2 | 570 | 14 | 576 | 2.1e-233 | 809.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43375.t1 | G7L419 | 81.4 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 1.8e-278 | 967.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene78774 | MS.gene43375 | PPI |
| MS.gene064168 | MS.gene43375 | PPI |
| MS.gene43375 | MS.gene95748 | PPI |
| MS.gene43375 | MS.gene053964 | PPI |
| MS.gene43375 | MS.gene073214 | PPI |
| MS.gene25516 | MS.gene43375 | PPI |
| MS.gene36841 | MS.gene43375 | PPI |
| MS.gene43375 | MS.gene046033 | PPI |
| MS.gene43375 | MS.gene99230 | PPI |
| MS.gene43375 | MS.gene34650 | PPI |
| MS.gene045936 | MS.gene43375 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43375.t1 | MTR_7g117110 | 81.436 | 571 | 105 | 1 | 1 | 571 | 10 | 579 | 0.0 | 977 |
| MS.gene43375.t1 | MTR_8g027920 | 70.753 | 571 | 162 | 3 | 1 | 571 | 10 | 575 | 0.0 | 858 |
| MS.gene43375.t1 | MTR_8g027965 | 69.877 | 571 | 167 | 3 | 1 | 571 | 10 | 575 | 0.0 | 847 |
| MS.gene43375.t1 | MTR_8g027955 | 69.352 | 571 | 170 | 3 | 1 | 571 | 17 | 582 | 0.0 | 840 |
| MS.gene43375.t1 | MTR_8g027970 | 66.550 | 571 | 186 | 3 | 1 | 571 | 10 | 575 | 0.0 | 820 |
| MS.gene43375.t1 | MTR_7g117110 | 77.919 | 394 | 86 | 1 | 1 | 394 | 10 | 402 | 0.0 | 647 |
| MS.gene43375.t1 | MTR_0102s0060 | 46.141 | 583 | 297 | 7 | 2 | 571 | 19 | 597 | 0.0 | 540 |
| MS.gene43375.t1 | MTR_8g037720 | 70.621 | 354 | 81 | 2 | 218 | 571 | 105 | 435 | 7.09e-179 | 512 |
| MS.gene43375.t1 | MTR_8g037720 | 81.600 | 125 | 23 | 0 | 1 | 125 | 1 | 125 | 1.37e-65 | 220 |
| MS.gene43375.t1 | MTR_1g047730 | 90.458 | 262 | 14 | 1 | 310 | 571 | 112 | 362 | 2.93e-169 | 484 |
| MS.gene43375.t1 | MTR_1g047730 | 64.557 | 158 | 12 | 2 | 1 | 158 | 1 | 114 | 2.42e-53 | 186 |
| MS.gene43375.t1 | MTR_5g016320 | 40.104 | 576 | 335 | 5 | 1 | 570 | 20 | 591 | 9.07e-149 | 441 |
| MS.gene43375.t1 | MTR_0035s0150 | 39.895 | 569 | 325 | 7 | 3 | 567 | 21 | 576 | 3.54e-142 | 424 |
| MS.gene43375.t1 | MTR_4g045903 | 37.979 | 574 | 341 | 6 | 3 | 568 | 31 | 597 | 8.41e-138 | 413 |
| MS.gene43375.t1 | MTR_8g467000 | 37.824 | 579 | 341 | 7 | 3 | 567 | 16 | 589 | 5.18e-136 | 409 |
| MS.gene43375.t1 | MTR_2g081860 | 37.177 | 581 | 345 | 7 | 3 | 567 | 15 | 591 | 7.57e-133 | 400 |
| MS.gene43375.t1 | MTR_1g088765 | 36.898 | 561 | 330 | 10 | 5 | 546 | 14 | 569 | 1.37e-120 | 369 |
| MS.gene43375.t1 | MTR_1g088765 | 38.605 | 430 | 240 | 10 | 134 | 546 | 3 | 425 | 2.62e-93 | 293 |
| MS.gene43375.t1 | MTR_7g094190 | 34.039 | 567 | 340 | 14 | 2 | 546 | 5 | 559 | 4.50e-91 | 291 |
| MS.gene43375.t1 | MTR_7g094190 | 32.906 | 468 | 287 | 11 | 96 | 546 | 2 | 459 | 4.13e-68 | 228 |
| MS.gene43375.t1 | MTR_7g094330 | 29.618 | 314 | 173 | 9 | 96 | 400 | 2 | 276 | 3.76e-34 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43375.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 21 | 586 | 0.0 | 749 |
| MS.gene43375.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 10 | 575 | 0.0 | 748 |
| MS.gene43375.t1 | AT2G46370 | 61.189 | 572 | 214 | 4 | 1 | 570 | 10 | 575 | 0.0 | 748 |
| MS.gene43375.t1 | AT2G46370 | 61.753 | 502 | 186 | 2 | 69 | 570 | 1 | 496 | 0.0 | 678 |
| MS.gene43375.t1 | AT4G03400 | 48.299 | 588 | 281 | 7 | 2 | 571 | 9 | 591 | 0.0 | 565 |
| MS.gene43375.t1 | AT4G03400 | 48.299 | 588 | 281 | 7 | 2 | 571 | 9 | 591 | 0.0 | 565 |
| MS.gene43375.t1 | AT4G37390 | 39.168 | 577 | 335 | 8 | 3 | 570 | 25 | 594 | 4.30e-142 | 424 |
| MS.gene43375.t1 | AT2G23170 | 38.435 | 575 | 338 | 6 | 3 | 570 | 21 | 586 | 9.17e-141 | 421 |
| MS.gene43375.t1 | AT2G14960 | 39.304 | 575 | 327 | 9 | 3 | 570 | 21 | 580 | 1.90e-139 | 417 |
| MS.gene43375.t1 | AT4G27260 | 38.542 | 576 | 337 | 5 | 5 | 567 | 25 | 596 | 1.27e-138 | 416 |
| MS.gene43375.t1 | AT1G59500 | 39.410 | 576 | 329 | 9 | 3 | 570 | 25 | 588 | 9.26e-138 | 413 |
| MS.gene43375.t1 | AT1G23160 | 38.261 | 575 | 327 | 9 | 8 | 568 | 18 | 578 | 1.49e-134 | 404 |
| MS.gene43375.t1 | AT5G54510 | 37.565 | 575 | 338 | 8 | 8 | 567 | 28 | 596 | 5.93e-132 | 399 |
| MS.gene43375.t1 | AT5G13320 | 36.615 | 579 | 341 | 8 | 2 | 567 | 9 | 574 | 4.75e-131 | 395 |
| MS.gene43375.t1 | AT5G13320 | 36.615 | 579 | 341 | 8 | 2 | 567 | 9 | 574 | 4.75e-131 | 395 |
| MS.gene43375.t1 | AT5G13320 | 36.615 | 579 | 341 | 8 | 2 | 567 | 24 | 589 | 1.07e-130 | 394 |
| MS.gene43375.t1 | AT5G13370 | 37.018 | 570 | 343 | 9 | 8 | 567 | 17 | 580 | 3.40e-125 | 380 |
| MS.gene43375.t1 | AT1G48660 | 36.411 | 574 | 342 | 9 | 5 | 567 | 7 | 568 | 5.16e-124 | 377 |
| MS.gene43375.t1 | AT1G48660 | 36.364 | 572 | 342 | 9 | 5 | 567 | 7 | 565 | 3.81e-123 | 374 |
| MS.gene43375.t1 | AT5G13360 | 36.252 | 571 | 345 | 9 | 8 | 567 | 17 | 579 | 4.09e-123 | 375 |
| MS.gene43375.t1 | AT5G13360 | 36.252 | 571 | 345 | 9 | 8 | 567 | 17 | 579 | 4.09e-123 | 375 |
| MS.gene43375.t1 | AT5G13360 | 36.851 | 578 | 332 | 12 | 8 | 567 | 95 | 657 | 3.75e-122 | 375 |
| MS.gene43375.t1 | AT5G13350 | 35.777 | 573 | 346 | 10 | 8 | 567 | 17 | 580 | 3.99e-122 | 372 |
| MS.gene43375.t1 | AT5G13350 | 35.777 | 573 | 346 | 10 | 8 | 567 | 17 | 580 | 3.99e-122 | 372 |
| MS.gene43375.t1 | AT5G13380 | 36.380 | 569 | 347 | 8 | 8 | 567 | 47 | 609 | 9.96e-121 | 370 |
| MS.gene43375.t1 | AT1G28130 | 35.556 | 585 | 347 | 10 | 8 | 567 | 17 | 596 | 5.68e-120 | 367 |
| MS.gene43375.t1 | AT2G47750 | 37.326 | 576 | 344 | 10 | 2 | 567 | 9 | 577 | 6.70e-120 | 367 |
| MS.gene43375.t1 | AT5G51470 | 35.993 | 564 | 341 | 7 | 6 | 561 | 14 | 565 | 2.54e-118 | 362 |
| MS.gene43375.t1 | AT5G51470 | 35.759 | 481 | 290 | 6 | 89 | 561 | 6 | 475 | 1.49e-97 | 306 |
| MS.gene43375.t1 | AT1G48670 | 32.982 | 570 | 311 | 9 | 7 | 567 | 10 | 517 | 4.54e-97 | 305 |
| MS.gene43375.t1 | AT1G48670 | 37.562 | 402 | 233 | 5 | 174 | 567 | 15 | 406 | 9.77e-94 | 293 |
| MS.gene43375.t1 | AT1G28130 | 35.886 | 457 | 266 | 8 | 134 | 567 | 1 | 453 | 5.91e-92 | 290 |
| MS.gene43375.t1 | AT1G48690 | 32.979 | 188 | 122 | 2 | 5 | 192 | 7 | 190 | 1.57e-23 | 98.6 |
Find 122 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAGAATATTTGCAAAATT+TGG | 0.027959 | 1.4:-32684071 | MS.gene43375:CDS |
| CTGTCACTGCTATGTCTTTA+AGG | 0.139591 | 1.4:-32683922 | MS.gene43375:intron |
| TTGCAAAATTTGGGTCTTAA+TGG | 0.188482 | 1.4:-32684061 | MS.gene43375:CDS |
| TGGATTATGTTAGCTAATTC+TGG | 0.193129 | 1.4:+32683037 | None:intergenic |
| CATGATTCCGAAAATGTATT+TGG | 0.214843 | 1.4:+32682955 | None:intergenic |
| ATTATTAGCAGAAGAGAAAT+TGG | 0.222752 | 1.4:-32682225 | MS.gene43375:CDS |
| AGTAACACTGAAACGAATTT+TGG | 0.224757 | 1.4:-32684107 | MS.gene43375:CDS |
| TATGCTGTGTTTCCTCAAAA+TGG | 0.241224 | 1.4:-32682794 | MS.gene43375:CDS |
| TACATAGTGCCCTGGCTCTT+TGG | 0.258905 | 1.4:+32682169 | None:intergenic |
| CTGCGAATGAACTTGAGTTT+TGG | 0.262016 | 1.4:+32682326 | None:intergenic |
| TCATTCCATGGTACATATTT+CGG | 0.266849 | 1.4:+32683624 | None:intergenic |
| CTTGATCATTACTTGGGATT+AGG | 0.268305 | 1.4:-32681981 | MS.gene43375:CDS |
| CAGGGCACTATGTAATATTC+TGG | 0.270183 | 1.4:-32682160 | MS.gene43375:CDS |
| CGGAATCATGAGTGGGTCTA+TGG | 0.284652 | 1.4:-32682942 | MS.gene43375:CDS |
| TCAATAATTCTGTTGATATA+AGG | 0.285153 | 1.4:+32683977 | None:intergenic |
| GGTTCTTACTAGCAGAATTA+TGG | 0.287158 | 1.4:-32683104 | MS.gene43375:CDS |
| TTTCAGGTTTATACCGATAT+AGG | 0.295301 | 1.4:-32682391 | MS.gene43375:intron |
| ATGTTAGCTAATTCTGGATT+TGG | 0.302150 | 1.4:+32683043 | None:intergenic |
| GACATAGCCATTCGAATAGA+TGG | 0.313509 | 1.4:+32683079 | None:intergenic |
| ACTTGTTACACACAAAGATT+TGG | 0.315068 | 1.4:-32684002 | MS.gene43375:CDS |
| GCAGAATATTTGCAAAATTT+GGG | 0.329600 | 1.4:-32684070 | MS.gene43375:CDS |
| CTTTAGAACTCCGAGTTGTT+AGG | 0.333344 | 1.4:-32682025 | MS.gene43375:CDS |
| AAGGCTTTACACTTTATATA+TGG | 0.348340 | 1.4:-32683421 | MS.gene43375:CDS |
| CTAGTACTTACCTGCTGAAT+TGG | 0.348980 | 1.4:+32682652 | None:intergenic |
| CCGAAAATGTATTTGGCGTT+AGG | 0.350472 | 1.4:+32682962 | None:intergenic |
| ACAGCATAAGTTGCCAAATC+AGG | 0.369408 | 1.4:+32682809 | None:intergenic |
| TAATATTCTGGGAAATCAAT+GGG | 0.390279 | 1.4:-32682148 | MS.gene43375:CDS |
| CTCGTAGCTACGACTATTAC+AGG | 0.396155 | 1.4:-32683370 | MS.gene43375:CDS |
| CTCGTAAATTCAACACTATC+GGG | 0.398460 | 1.4:-32682049 | MS.gene43375:CDS |
| GGCTATTTGTAAATCCTTCT+CGG | 0.406047 | 1.4:+32682265 | None:intergenic |
| TTATATTGTCATCTATTAAG+TGG | 0.410782 | 1.4:-32683244 | MS.gene43375:CDS |
| AATTGAAAGCAGTACTGAAA+TGG | 0.411718 | 1.4:+32681868 | None:intergenic |
| TATATCAACAGAATTATTGA+TGG | 0.412423 | 1.4:-32683974 | MS.gene43375:CDS |
| TGCGCTGATCCTCGGCCAGT+GGG | 0.421011 | 1.4:-32682719 | MS.gene43375:CDS |
| CCACGTCCCCTAGCCTATAT+CGG | 0.428183 | 1.4:+32682378 | None:intergenic |
| AATGTATAGGGATGAACAAC+TGG | 0.430483 | 1.4:-32683009 | MS.gene43375:CDS |
| GAAGATTCTTGATCATTACT+TGG | 0.438841 | 1.4:-32681988 | MS.gene43375:CDS |
| GGGGACGTGGTAAAAGTTAT+GGG | 0.445224 | 1.4:-32682365 | MS.gene43375:CDS |
| GGACAAAATACCACTTCATC+TGG | 0.446840 | 1.4:+32683283 | None:intergenic |
| AATTGAGAACCTGCTCATAT+AGG | 0.447744 | 1.4:+32683557 | None:intergenic |
| TGCAGTTCTGGCACTACTCA+AGG | 0.448035 | 1.4:-32683651 | MS.gene43375:intron |
| GATAAGTCTTTCATCGATGC+AGG | 0.448638 | 1.4:-32682083 | MS.gene43375:CDS |
| GTTCAAAGGTTCTGAAAGCT+TGG | 0.451624 | 1.4:+32683164 | None:intergenic |
| AGGGGACGTGGTAAAAGTTA+TGG | 0.452477 | 1.4:-32682366 | MS.gene43375:CDS |
| GGGTCTATGGAGCCATATAT+AGG | 0.456213 | 1.4:-32682929 | MS.gene43375:CDS |
| GTAATATTCTGGGAAATCAA+TGG | 0.457211 | 1.4:-32682149 | MS.gene43375:CDS |
| CTCTTCCCACACTTGTTCAA+AGG | 0.458475 | 1.4:+32683150 | None:intergenic |
| TTCACCTCAGTGAGCCCCAC+TGG | 0.462755 | 1.4:+32682704 | None:intergenic |
| ACAGGCTTTGTAGTGAGAAT+AGG | 0.464344 | 1.4:+32683941 | None:intergenic |
| GATTGAGTGTTGCAACTGTT+TGG | 0.464387 | 1.4:-32682105 | MS.gene43375:CDS |
| CTTTCCTTTGCGCTGATCCT+CGG | 0.464566 | 1.4:-32682727 | MS.gene43375:CDS |
| CCGATATAGGCTAGGGGACG+TGG | 0.478475 | 1.4:-32682378 | MS.gene43375:CDS |
| GTCGATTTATCCAAAGAGCC+AGG | 0.485007 | 1.4:-32682179 | MS.gene43375:CDS |
| CCTGCTCATATAGGCAAAAG+AGG | 0.486162 | 1.4:+32683566 | None:intergenic |
| AGTGGGGCTCACTGAGGTGA+AGG | 0.492164 | 1.4:-32682702 | MS.gene43375:CDS |
| TGGACTATGTTATGAGCAAA+TGG | 0.495394 | 1.4:+32683184 | None:intergenic |
| TCTCGTAAATTCAACACTAT+CGG | 0.495584 | 1.4:-32682050 | MS.gene43375:CDS |
| AGCAAACAGTTCAAAACAAG+AGG | 0.496078 | 1.4:-32683397 | MS.gene43375:CDS |
| CAAGTTTATAGAAGAATTTG+AGG | 0.497165 | 1.4:-32684161 | MS.gene43375:CDS |
| ACACATGACTTGAAACTCTC+AGG | 0.499043 | 1.4:+32684028 | None:intergenic |
| TCAGTGAGCCCCACTGGCCG+AGG | 0.503729 | 1.4:+32682710 | None:intergenic |
| AAGATTCTTGATCATTACTT+GGG | 0.506557 | 1.4:-32681987 | MS.gene43375:CDS |
| GAACTCCGAGTTGTTAGGAA+AGG | 0.512733 | 1.4:-32682020 | MS.gene43375:CDS |
| CAGCATAAGTTGCCAAATCA+GGG | 0.513636 | 1.4:+32682810 | None:intergenic |
| TTGCGCTGATCCTCGGCCAG+TGG | 0.516907 | 1.4:-32682720 | MS.gene43375:CDS |
| TCTATCTACGGAGCTTCTGA+AGG | 0.519022 | 1.4:-32682866 | MS.gene43375:CDS |
| GGTTTATACCGATATAGGCT+AGG | 0.519182 | 1.4:-32682386 | MS.gene43375:CDS |
| AGGGCACTATGTAATATTCT+GGG | 0.521159 | 1.4:-32682159 | MS.gene43375:CDS |
| TCAAACAATTCATCATTCCA+TGG | 0.521283 | 1.4:+32683612 | None:intergenic |
| AAATCTTTGTGTGTAACAAG+TGG | 0.522472 | 1.4:+32684004 | None:intergenic |
| CAGAACCTTTGAACAAGTGT+GGG | 0.527080 | 1.4:-32683155 | MS.gene43375:CDS |
| CTCACACAGCTTAGCAATGA+GGG | 0.529703 | 1.4:-32682752 | MS.gene43375:CDS |
| GGAAAATTGAGGCATTATGC+AGG | 0.532140 | 1.4:-32682908 | MS.gene43375:CDS |
| CTCAAGTTCATTCGCAGGAG+TGG | 0.532828 | 1.4:-32682320 | MS.gene43375:CDS |
| TAATTTAGACGATGCTTCCA+CGG | 0.535634 | 1.4:+32682244 | None:intergenic |
| GTTTATACCGATATAGGCTA+GGG | 0.538715 | 1.4:-32682385 | MS.gene43375:CDS |
| TCAGAACCTTTGAACAAGTG+TGG | 0.541122 | 1.4:-32683156 | MS.gene43375:CDS |
| ATTGTTGTGACCAATTCAGC+AGG | 0.541922 | 1.4:-32682662 | MS.gene43375:intron |
| TTCACTGCATGCGTATAACA+TGG | 0.543670 | 1.4:+32683331 | None:intergenic |
| ATGTTATACGCATGCAGTGA+AGG | 0.545900 | 1.4:-32683329 | MS.gene43375:CDS |
| CAGAATATTACATAGTGCCC+TGG | 0.563126 | 1.4:+32682161 | None:intergenic |
| CTTAAAGACATAGCAGTGAC+AGG | 0.563677 | 1.4:+32683923 | None:intergenic |
| TATGGTTCCATCTATTCGAA+TGG | 0.568847 | 1.4:-32683086 | MS.gene43375:CDS |
| CAAAACTCAAGTTCATTCGC+AGG | 0.568939 | 1.4:-32682325 | MS.gene43375:CDS |
| TGCAAAACAATGTTGTGTGC+AGG | 0.574567 | 1.4:+32681918 | None:intergenic |
| AACTGAGTGCAGATGCAGCA+AGG | 0.575201 | 1.4:-32684138 | MS.gene43375:CDS |
| CTTTGTGGCGATATAAGAGA+AGG | 0.580598 | 1.4:-32683127 | MS.gene43375:CDS |
| GGGCTCACTGAGGTGAAGGT+TGG | 0.580822 | 1.4:-32682698 | MS.gene43375:CDS |
| ATATTGCAGTCCAGATGAAG+TGG | 0.582078 | 1.4:-32683293 | MS.gene43375:CDS |
| TGTGCAGGACCTACACATCT+TGG | 0.586731 | 1.4:+32681933 | None:intergenic |
| ACTGAGTGCAGATGCAGCAA+GGG | 0.592800 | 1.4:-32684137 | MS.gene43375:CDS |
| ATAGGGATGAACAACTGGTA+TGG | 0.597791 | 1.4:-32683004 | MS.gene43375:CDS |
| CCTCTAGTGACTTCTATCTA+CGG | 0.602111 | 1.4:-32682878 | MS.gene43375:CDS |
| GCGCTGATCCTCGGCCAGTG+GGG | 0.602151 | 1.4:-32682718 | MS.gene43375:CDS |
| CTATCTACGGAGCTTCTGAA+GGG | 0.605624 | 1.4:-32682865 | MS.gene43375:CDS |
| GCAAACAGTTCAAAACAAGA+GGG | 0.609169 | 1.4:-32683396 | MS.gene43375:CDS |
| GCAGTTCTGGCACTACTCAA+GGG | 0.610736 | 1.4:-32683650 | MS.gene43375:intron |
| TTTGTGGCGATATAAGAGAA+GGG | 0.610870 | 1.4:-32683126 | MS.gene43375:CDS |
| TATAAGACACCAAGATGTGT+AGG | 0.611240 | 1.4:-32681942 | MS.gene43375:CDS |
| CTGGCCGAGGATCAGCGCAA+AGG | 0.620440 | 1.4:+32682723 | None:intergenic |
| AGCATAAGTTGCCAAATCAG+GGG | 0.621676 | 1.4:+32682811 | None:intergenic |
| TCTCACACAGCTTAGCAATG+AGG | 0.621741 | 1.4:-32682753 | MS.gene43375:CDS |
| CATTGACAAGAATACCGAGA+AGG | 0.623915 | 1.4:-32682279 | MS.gene43375:CDS |
| TTGTGGCGATATAAGAGAAG+GGG | 0.625311 | 1.4:-32683125 | MS.gene43375:CDS |
| AGCCATATATAGGAAAATTG+AGG | 0.628804 | 1.4:-32682919 | MS.gene43375:CDS |
| TTGGCGTTAGGAAACAACTC+TGG | 0.629080 | 1.4:+32682974 | None:intergenic |
| TCGGCCAGTGGGGCTCACTG+AGG | 0.631494 | 1.4:-32682708 | MS.gene43375:CDS |
| ATGTTCCTTTCCTAACAACT+CGG | 0.632446 | 1.4:+32682015 | None:intergenic |
| GGAAGCCGAAATATGTACCA+TGG | 0.632924 | 1.4:-32683629 | MS.gene43375:CDS |
| GAAGGATTTACAAATAGCCG+TGG | 0.637955 | 1.4:-32682261 | MS.gene43375:CDS |
| TCATTGCTAAGCTGTGTGAG+AGG | 0.638842 | 1.4:+32682755 | None:intergenic |
| TCGATTTATCCAAAGAGCCA+GGG | 0.643787 | 1.4:-32682178 | MS.gene43375:CDS |
| TCGTAAATTCAACACTATCG+GGG | 0.644179 | 1.4:-32682048 | MS.gene43375:CDS |
| AAACAGTTCAAAACAAGAGG+GGG | 0.650220 | 1.4:-32683394 | MS.gene43375:CDS |
| GCATAAGTTGCCAAATCAGG+GGG | 0.662211 | 1.4:+32682812 | None:intergenic |
| CCGTAGATAGAAGTCACTAG+AGG | 0.665991 | 1.4:+32682878 | None:intergenic |
| AAGTGGACTGATTTACTGCG+AGG | 0.679750 | 1.4:-32683227 | MS.gene43375:CDS |
| GCTCTTTGGATAAATCGACA+TGG | 0.682927 | 1.4:+32682183 | None:intergenic |
| CAAACAGTTCAAAACAAGAG+GGG | 0.691597 | 1.4:-32683395 | MS.gene43375:CDS |
| CAAGTGTGGGAAGAGCTTTG+TGG | 0.700373 | 1.4:-32683142 | MS.gene43375:CDS |
| AATATTCTGGGAAATCAATG+GGG | 0.705325 | 1.4:-32682147 | MS.gene43375:CDS |
| TTTATACCGATATAGGCTAG+GGG | 0.725642 | 1.4:-32682384 | MS.gene43375:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGATATCTATATTTAA+TGG | + | chr1.4:32683507-32683526 | None:intergenic | 10.0% |
| !! | ATATAATGACTGAAAAAAAT+CGG | + | chr1.4:32682774-32682793 | None:intergenic | 15.0% |
| !! | ATAATCCACAAAAAATGTAT+AGG | - | chr1.4:32683010-32683029 | MS.gene43375:CDS | 20.0% |
| !! | TAATCCACAAAAAATGTATA+GGG | - | chr1.4:32683011-32683030 | MS.gene43375:CDS | 20.0% |
| !! | TATAATGACTGAAAAAAATC+GGG | + | chr1.4:32682773-32682792 | None:intergenic | 20.0% |
| !! | TATATCAACAGAATTATTGA+TGG | - | chr1.4:32682058-32682077 | MS.gene43375:CDS | 20.0% |
| !! | TCAATAATTCTGTTGATATA+AGG | + | chr1.4:32682058-32682077 | None:intergenic | 20.0% |
| !! | TCTGACATATATAATTCAAA+TGG | - | chr1.4:32682558-32682577 | MS.gene43375:intron | 20.0% |
| !! | TGTTTGAAAGTAAAACTAAT+AGG | - | chr1.4:32683533-32683552 | MS.gene43375:intron | 20.0% |
| !! | TTATATTGTCATCTATTAAG+TGG | - | chr1.4:32682788-32682807 | MS.gene43375:CDS | 20.0% |
| !! | TTCGCATAATAGAAATATAT+AGG | + | chr1.4:32682263-32682282 | None:intergenic | 20.0% |
| !!! | AAAGACTTATAAAAGTTTTC+CGG | + | chr1.4:32682349-32682368 | None:intergenic | 20.0% |
| !!! | CAACGTTCTATATTTTTTAT+CGG | + | chr1.4:32682213-32682232 | None:intergenic | 20.0% |
| ! | AAGATTCTTGATCATTACTT+GGG | - | chr1.4:32684045-32684064 | MS.gene43375:CDS | 25.0% |
| ! | AAGGCTTTACACTTTATATA+TGG | - | chr1.4:32682611-32682630 | MS.gene43375:intron | 25.0% |
| ! | AGCAGAATATTTGCAAAATT+TGG | - | chr1.4:32681961-32681980 | MS.gene43375:CDS | 25.0% |
| ! | AGTTTCCTTTGATGAAAAAT+GGG | - | chr1.4:32682588-32682607 | MS.gene43375:intron | 25.0% |
| ! | ATTATTAGCAGAAGAGAAAT+TGG | - | chr1.4:32683807-32683826 | MS.gene43375:intron | 25.0% |
| ! | CAAGTTTATAGAAGAATTTG+AGG | - | chr1.4:32681871-32681890 | MS.gene43375:CDS | 25.0% |
| ! | GCAGAATATTTGCAAAATTT+GGG | - | chr1.4:32681962-32681981 | MS.gene43375:CDS | 25.0% |
| ! | TAAAACTAATAGGTGAACTT+GGG | - | chr1.4:32683543-32683562 | MS.gene43375:intron | 25.0% |
| ! | TAACATGGCTATATAATTTC+AGG | - | chr1.4:32683625-32683644 | MS.gene43375:CDS | 25.0% |
| ! | TTCTATTATGCGAAAATCAT+TGG | - | chr1.4:32682269-32682288 | MS.gene43375:CDS | 25.0% |
| !! | TAATATTCTGGGAAATCAAT+GGG | - | chr1.4:32683884-32683903 | MS.gene43375:intron | 25.0% |
| !!! | AATCATGATGTTTTTTTGAG+AGG | - | chr1.4:32682237-32682256 | MS.gene43375:CDS | 25.0% |
| AAATCTTTGTGTGTAACAAG+TGG | + | chr1.4:32682031-32682050 | None:intergenic | 30.0% | |
| AAGAAACATAAACAAACGAG+GGG | + | chr1.4:32682148-32682167 | None:intergenic | 30.0% | |
| AATCATTGGATCAAATCGAA+TGG | - | chr1.4:32682283-32682302 | MS.gene43375:CDS | 30.0% | |
| AGCCATATATAGGAAAATTG+AGG | - | chr1.4:32683113-32683132 | MS.gene43375:CDS | 30.0% | |
| ATATAGCCATGTTAGTTACT+TGG | + | chr1.4:32683619-32683638 | None:intergenic | 30.0% | |
| ATGTTAGCTAATTCTGGATT+TGG | + | chr1.4:32682992-32683011 | None:intergenic | 30.0% | |
| CATGATTCCGAAAATGTATT+TGG | + | chr1.4:32683080-32683099 | None:intergenic | 30.0% | |
| GAAGAAACATAAACAAACGA+GGG | + | chr1.4:32682149-32682168 | None:intergenic | 30.0% | |
| GAAGATTCTTGATCATTACT+TGG | - | chr1.4:32684044-32684063 | MS.gene43375:CDS | 30.0% | |
| GAGTTTCCTTTGATGAAAAA+TGG | - | chr1.4:32682587-32682606 | MS.gene43375:intron | 30.0% | |
| GTAAAACTAATAGGTGAACT+TGG | - | chr1.4:32683542-32683561 | MS.gene43375:intron | 30.0% | |
| TATGATCCAAGTAACTAACA+TGG | - | chr1.4:32683610-32683629 | MS.gene43375:CDS | 30.0% | |
| TCAAACAATTCATCATTCCA+TGG | + | chr1.4:32682423-32682442 | None:intergenic | 30.0% | |
| TCATTCCATGGTACATATTT+CGG | + | chr1.4:32682411-32682430 | None:intergenic | 30.0% | |
| TCTCGTAAATTCAACACTAT+CGG | - | chr1.4:32683982-32684001 | MS.gene43375:CDS | 30.0% | |
| TGAAGAAACATAAACAAACG+AGG | + | chr1.4:32682150-32682169 | None:intergenic | 30.0% | |
| TGGATTATGTTAGCTAATTC+TGG | + | chr1.4:32682998-32683017 | None:intergenic | 30.0% | |
| TTGCAAAATTTGGGTCTTAA+TGG | - | chr1.4:32681971-32681990 | MS.gene43375:CDS | 30.0% | |
| ! | AATATTCTGGGAAATCAATG+GGG | - | chr1.4:32683885-32683904 | MS.gene43375:intron | 30.0% |
| ! | AATTGAAAGCAGTACTGAAA+TGG | + | chr1.4:32684167-32684186 | None:intergenic | 30.0% |
| ! | ACTTGTTACACACAAAGATT+TGG | - | chr1.4:32682030-32682049 | MS.gene43375:CDS | 30.0% |
| ! | AGTAACACTGAAACGAATTT+TGG | - | chr1.4:32681925-32681944 | MS.gene43375:CDS | 30.0% |
| ! | CGGTTTACTACTTTATTTAG+AGG | + | chr1.4:32682193-32682212 | None:intergenic | 30.0% |
| ! | GTAATATTCTGGGAAATCAA+TGG | - | chr1.4:32683883-32683902 | MS.gene43375:intron | 30.0% |
| ! | TGCCTCAATTTTCCTATATA+TGG | + | chr1.4:32683118-32683137 | None:intergenic | 30.0% |
| ! | TGTTTTGTGAAATGTGACTT+TGG | - | chr1.4:32683458-32683477 | MS.gene43375:intron | 30.0% |
| !! | TTTCAGGTTTATACCGATAT+AGG | - | chr1.4:32683641-32683660 | MS.gene43375:CDS | 30.0% |
| !!! | TCATCCCTATACATTTTTTG+TGG | + | chr1.4:32683018-32683037 | None:intergenic | 30.0% |
| AAACAGTTCAAAACAAGAGG+GGG | - | chr1.4:32682638-32682657 | MS.gene43375:intron | 35.0% | |
| AATGTATAGGGATGAACAAC+TGG | - | chr1.4:32683023-32683042 | MS.gene43375:CDS | 35.0% | |
| AATTGAGAACCTGCTCATAT+AGG | + | chr1.4:32682478-32682497 | None:intergenic | 35.0% | |
| AGCAAACAGTTCAAAACAAG+AGG | - | chr1.4:32682635-32682654 | MS.gene43375:intron | 35.0% | |
| ATGTTCCTTTCCTAACAACT+CGG | + | chr1.4:32684020-32684039 | None:intergenic | 35.0% | |
| CAAACAGTTCAAAACAAGAG+GGG | - | chr1.4:32682637-32682656 | MS.gene43375:intron | 35.0% | |
| CAAATCGAATGGCATATATC+TGG | - | chr1.4:32682294-32682313 | MS.gene43375:CDS | 35.0% | |
| CTCGTAAATTCAACACTATC+GGG | - | chr1.4:32683983-32684002 | MS.gene43375:CDS | 35.0% | |
| CTTGATCATTACTTGGGATT+AGG | - | chr1.4:32684051-32684070 | MS.gene43375:CDS | 35.0% | |
| GCAAACAGTTCAAAACAAGA+GGG | - | chr1.4:32682636-32682655 | MS.gene43375:intron | 35.0% | |
| GGCTATTTGTAAATCCTTCT+CGG | + | chr1.4:32683770-32683789 | None:intergenic | 35.0% | |
| GGTTCTTACTAGCAGAATTA+TGG | - | chr1.4:32682928-32682947 | MS.gene43375:CDS | 35.0% | |
| GTTTATACCGATATAGGCTA+GGG | - | chr1.4:32683647-32683666 | MS.gene43375:CDS | 35.0% | |
| TAATTTAGACGATGCTTCCA+CGG | + | chr1.4:32683791-32683810 | None:intergenic | 35.0% | |
| TATAAGACACCAAGATGTGT+AGG | - | chr1.4:32684090-32684109 | MS.gene43375:CDS | 35.0% | |
| TATGCTGTGTTTCCTCAAAA+TGG | - | chr1.4:32683238-32683257 | MS.gene43375:CDS | 35.0% | |
| TATGGTTCCATCTATTCGAA+TGG | - | chr1.4:32682946-32682965 | MS.gene43375:CDS | 35.0% | |
| TCCTTTGATGAAAAATGGGA+AGG | - | chr1.4:32682592-32682611 | MS.gene43375:intron | 35.0% | |
| TCGTAAATTCAACACTATCG+GGG | - | chr1.4:32683984-32684003 | MS.gene43375:CDS | 35.0% | |
| TGGACTATGTTATGAGCAAA+TGG | + | chr1.4:32682851-32682870 | None:intergenic | 35.0% | |
| TTTATACCGATATAGGCTAG+GGG | - | chr1.4:32683648-32683667 | MS.gene43375:CDS | 35.0% | |
| TTTGTGGCGATATAAGAGAA+GGG | - | chr1.4:32682906-32682925 | MS.gene43375:CDS | 35.0% | |
| ! | AACACTGAAACGAATTTTGG+AGG | - | chr1.4:32681928-32681947 | MS.gene43375:CDS | 35.0% |
| ! | ACATTTTCGGAATCATGAGT+GGG | - | chr1.4:32683083-32683102 | MS.gene43375:CDS | 35.0% |
| ! | AGGGCACTATGTAATATTCT+GGG | - | chr1.4:32683873-32683892 | MS.gene43375:intron | 35.0% |
| ! | CCTAACGCCAAATACATTTT+CGG | - | chr1.4:32683070-32683089 | MS.gene43375:CDS | 35.0% |
| ! | TACATTTTCGGAATCATGAG+TGG | - | chr1.4:32683082-32683101 | MS.gene43375:CDS | 35.0% |
| !! | AACTCGAAGTATCCATTTTG+AGG | + | chr1.4:32683253-32683272 | None:intergenic | 35.0% |
| !!! | TGAGTTTTGGAGTTGAGTTA+TGG | + | chr1.4:32683696-32683715 | None:intergenic | 35.0% |
| ACACATGACTTGAAACTCTC+AGG | + | chr1.4:32682007-32682026 | None:intergenic | 40.0% | |
| ACAGCATAAGTTGCCAAATC+AGG | + | chr1.4:32683226-32683245 | None:intergenic | 40.0% | |
| AGCATAAGTTGCCAAATCAG+GGG | + | chr1.4:32683224-32683243 | None:intergenic | 40.0% | |
| ATAGGGATGAACAACTGGTA+TGG | - | chr1.4:32683028-32683047 | MS.gene43375:CDS | 40.0% | |
| ATATTGCAGTCCAGATGAAG+TGG | - | chr1.4:32682739-32682758 | MS.gene43375:CDS | 40.0% | |
| ATGTTATACGCATGCAGTGA+AGG | - | chr1.4:32682703-32682722 | MS.gene43375:CDS | 40.0% | |
| ATTGTTGTGACCAATTCAGC+AGG | - | chr1.4:32683370-32683389 | MS.gene43375:CDS | 40.0% | |
| CAAAACTCAAGTTCATTCGC+AGG | - | chr1.4:32683707-32683726 | MS.gene43375:intron | 40.0% | |
| CAGAACCTTTGAACAAGTGT+GGG | - | chr1.4:32682877-32682896 | MS.gene43375:CDS | 40.0% | |
| CAGAATATTACATAGTGCCC+TGG | + | chr1.4:32683874-32683893 | None:intergenic | 40.0% | |
| CAGCATAAGTTGCCAAATCA+GGG | + | chr1.4:32683225-32683244 | None:intergenic | 40.0% | |
| CATTGACAAGAATACCGAGA+AGG | - | chr1.4:32683753-32683772 | MS.gene43375:intron | 40.0% | |
| CCGAAAATGTATTTGGCGTT+AGG | + | chr1.4:32683073-32683092 | None:intergenic | 40.0% | |
| CCTCTAGTGACTTCTATCTA+CGG | - | chr1.4:32683154-32683173 | MS.gene43375:CDS | 40.0% | |
| CTAGTACTTACCTGCTGAAT+TGG | + | chr1.4:32683383-32683402 | None:intergenic | 40.0% | |
| CTGTCACTGCTATGTCTTTA+AGG | - | chr1.4:32682110-32682129 | MS.gene43375:CDS | 40.0% | |
| CTTAAAGACATAGCAGTGAC+AGG | + | chr1.4:32682112-32682131 | None:intergenic | 40.0% | |
| CTTTGTGGCGATATAAGAGA+AGG | - | chr1.4:32682905-32682924 | MS.gene43375:CDS | 40.0% | |
| GAAGGATTTACAAATAGCCG+TGG | - | chr1.4:32683771-32683790 | MS.gene43375:intron | 40.0% | |
| GACATAGCCATTCGAATAGA+TGG | + | chr1.4:32682956-32682975 | None:intergenic | 40.0% | |
| GATAAGTCTTTCATCGATGC+AGG | - | chr1.4:32683949-32683968 | MS.gene43375:CDS | 40.0% | |
| GCTCTTTGGATAAATCGACA+TGG | + | chr1.4:32683852-32683871 | None:intergenic | 40.0% | |
| GGACAAAATACCACTTCATC+TGG | + | chr1.4:32682752-32682771 | None:intergenic | 40.0% | |
| GGTTTATACCGATATAGGCT+AGG | - | chr1.4:32683646-32683665 | MS.gene43375:CDS | 40.0% | |
| TCAGAACCTTTGAACAAGTG+TGG | - | chr1.4:32682876-32682895 | MS.gene43375:CDS | 40.0% | |
| TCGATTTATCCAAAGAGCCA+GGG | - | chr1.4:32683854-32683873 | MS.gene43375:intron | 40.0% | |
| TGCAAAACAATGTTGTGTGC+AGG | + | chr1.4:32684117-32684136 | None:intergenic | 40.0% | |
| TTCACTGCATGCGTATAACA+TGG | + | chr1.4:32682704-32682723 | None:intergenic | 40.0% | |
| TTGAAGTTGAACAATCGCAC+CGG | - | chr1.4:32682327-32682346 | MS.gene43375:CDS | 40.0% | |
| TTGTGGCGATATAAGAGAAG+GGG | - | chr1.4:32682907-32682926 | MS.gene43375:CDS | 40.0% | |
| ! | ACAGGCTTTGTAGTGAGAAT+AGG | + | chr1.4:32682094-32682113 | None:intergenic | 40.0% |
| ! | CAGGGCACTATGTAATATTC+TGG | - | chr1.4:32683872-32683891 | MS.gene43375:intron | 40.0% |
| ! | CTGCGAATGAACTTGAGTTT+TGG | + | chr1.4:32683709-32683728 | None:intergenic | 40.0% |
| ! | GATTGAGTGTTGCAACTGTT+TGG | - | chr1.4:32683927-32683946 | MS.gene43375:CDS | 40.0% |
| ! | GGAAAATTGAGGCATTATGC+AGG | - | chr1.4:32683124-32683143 | MS.gene43375:CDS | 40.0% |
| !! | CTTTAGAACTCCGAGTTGTT+AGG | - | chr1.4:32684007-32684026 | MS.gene43375:CDS | 40.0% |
| !! | GCCTTCCCATTTTTCATCAA+AGG | + | chr1.4:32682596-32682615 | None:intergenic | 40.0% |
| !! | GTTCAAAGGTTCTGAAAGCT+TGG | + | chr1.4:32682871-32682890 | None:intergenic | 40.0% |
| AGGGGACGTGGTAAAAGTTA+TGG | - | chr1.4:32683666-32683685 | MS.gene43375:intron | 45.0% | |
| CCAAATCAGGGGGAAGTTTA+GGG | + | chr1.4:32683213-32683232 | None:intergenic | 45.0% | |
| CCGTAGATAGAAGTCACTAG+AGG | + | chr1.4:32683157-32683176 | None:intergenic | 45.0% | |
| CCTGCTCATATAGGCAAAAG+AGG | + | chr1.4:32682469-32682488 | None:intergenic | 45.0% | |
| CTATCTACGGAGCTTCTGAA+GGG | - | chr1.4:32683167-32683186 | MS.gene43375:CDS | 45.0% | |
| CTCACACAGCTTAGCAATGA+GGG | - | chr1.4:32683280-32683299 | MS.gene43375:CDS | 45.0% | |
| CTCGTAGCTACGACTATTAC+AGG | - | chr1.4:32682662-32682681 | MS.gene43375:intron | 45.0% | |
| CTCTTCCCACACTTGTTCAA+AGG | + | chr1.4:32682885-32682904 | None:intergenic | 45.0% | |
| GAACGATGTTCTTGCAGTTC+TGG | - | chr1.4:32682369-32682388 | MS.gene43375:CDS | 45.0% | |
| GAACTCCGAGTTGTTAGGAA+AGG | - | chr1.4:32684012-32684031 | MS.gene43375:CDS | 45.0% | |
| GCATAAGTTGCCAAATCAGG+GGG | + | chr1.4:32683223-32683242 | None:intergenic | 45.0% | |
| GGAAGCCGAAATATGTACCA+TGG | - | chr1.4:32682403-32682422 | MS.gene43375:intron | 45.0% | |
| GGGGACGTGGTAAAAGTTAT+GGG | - | chr1.4:32683667-32683686 | MS.gene43375:intron | 45.0% | |
| GGGTCTATGGAGCCATATAT+AGG | - | chr1.4:32683103-32683122 | MS.gene43375:CDS | 45.0% | |
| TCATTGCTAAGCTGTGTGAG+AGG | + | chr1.4:32683280-32683299 | None:intergenic | 45.0% | |
| TCTATCTACGGAGCTTCTGA+AGG | - | chr1.4:32683166-32683185 | MS.gene43375:CDS | 45.0% | |
| TCTCACACAGCTTAGCAATG+AGG | - | chr1.4:32683279-32683298 | MS.gene43375:CDS | 45.0% | |
| TTGGCGTTAGGAAACAACTC+TGG | + | chr1.4:32683061-32683080 | None:intergenic | 45.0% | |
| ! | CCTCTTTTGCCTATATGAGC+AGG | - | chr1.4:32682466-32682485 | MS.gene43375:intron | 45.0% |
| ! | GTCGATTTATCCAAAGAGCC+AGG | - | chr1.4:32683853-32683872 | MS.gene43375:intron | 45.0% |
| !! | AAGTGGACTGATTTACTGCG+AGG | - | chr1.4:32682805-32682824 | MS.gene43375:CDS | 45.0% |
| AACTGAGTGCAGATGCAGCA+AGG | - | chr1.4:32681894-32681913 | MS.gene43375:CDS | 50.0% | |
| ACTGAGTGCAGATGCAGCAA+GGG | - | chr1.4:32681895-32681914 | MS.gene43375:CDS | 50.0% | |
| CAAGTGTGGGAAGAGCTTTG+TGG | - | chr1.4:32682890-32682909 | MS.gene43375:CDS | 50.0% | |
| CCCTAAACTTCCCCCTGATT+TGG | - | chr1.4:32683210-32683229 | MS.gene43375:CDS | 50.0% | |
| CGGAATCATGAGTGGGTCTA+TGG | - | chr1.4:32683090-32683109 | MS.gene43375:CDS | 50.0% | |
| CTCAAGTTCATTCGCAGGAG+TGG | - | chr1.4:32683712-32683731 | MS.gene43375:intron | 50.0% | |
| GCCAAATCAGGGGGAAGTTT+AGG | + | chr1.4:32683214-32683233 | None:intergenic | 50.0% | |
| TGTGCAGGACCTACACATCT+TGG | + | chr1.4:32684102-32684121 | None:intergenic | 50.0% | |
| ! | CTTTCCTTTGCGCTGATCCT+CGG | - | chr1.4:32683305-32683324 | MS.gene43375:CDS | 50.0% |
| ! | GCAGTTCTGGCACTACTCAA+GGG | - | chr1.4:32682382-32682401 | MS.gene43375:CDS | 50.0% |
| ! | TACATAGTGCCCTGGCTCTT+TGG | + | chr1.4:32683866-32683885 | None:intergenic | 50.0% |
| ! | TGCAGTTCTGGCACTACTCA+AGG | - | chr1.4:32682381-32682400 | MS.gene43375:CDS | 50.0% |
| CCACGTCCCCTAGCCTATAT+CGG | + | chr1.4:32683657-32683676 | None:intergenic | 55.0% | |
| AGTGGGGCTCACTGAGGTGA+AGG | - | chr1.4:32683330-32683349 | MS.gene43375:CDS | 60.0% | |
| CCGATATAGGCTAGGGGACG+TGG | - | chr1.4:32683654-32683673 | MS.gene43375:intron | 60.0% | |
| GGGCTCACTGAGGTGAAGGT+TGG | - | chr1.4:32683334-32683353 | MS.gene43375:CDS | 60.0% | |
| TTCACCTCAGTGAGCCCCAC+TGG | + | chr1.4:32683331-32683350 | None:intergenic | 60.0% | |
| CTGGCCGAGGATCAGCGCAA+AGG | + | chr1.4:32683312-32683331 | None:intergenic | 65.0% | |
| ! | TGCGCTGATCCTCGGCCAGT+GGG | - | chr1.4:32683313-32683332 | MS.gene43375:CDS | 65.0% |
| ! | TTGCGCTGATCCTCGGCCAG+TGG | - | chr1.4:32683312-32683331 | MS.gene43375:CDS | 65.0% |
| TCAGTGAGCCCCACTGGCCG+AGG | + | chr1.4:32683325-32683344 | None:intergenic | 70.0% | |
| TCGGCCAGTGGGGCTCACTG+AGG | - | chr1.4:32683324-32683343 | MS.gene43375:CDS | 70.0% | |
| ! | GCGCTGATCCTCGGCCAGTG+GGG | - | chr1.4:32683314-32683333 | MS.gene43375:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 32681866 | 32684188 | 32681866 | ID=MS.gene43375 |
| chr1.4 | mRNA | 32681866 | 32684188 | 32681866 | ID=MS.gene43375.t1;Parent=MS.gene43375 |
| chr1.4 | exon | 32683923 | 32684188 | 32683923 | ID=MS.gene43375.t1.exon1;Parent=MS.gene43375.t1 |
| chr1.4 | CDS | 32683923 | 32684188 | 32683923 | ID=cds.MS.gene43375.t1;Parent=MS.gene43375.t1 |
| chr1.4 | exon | 32683567 | 32683668 | 32683567 | ID=MS.gene43375.t1.exon2;Parent=MS.gene43375.t1 |
| chr1.4 | CDS | 32683567 | 32683668 | 32683567 | ID=cds.MS.gene43375.t1;Parent=MS.gene43375.t1 |
| chr1.4 | exon | 32682663 | 32683468 | 32682663 | ID=MS.gene43375.t1.exon3;Parent=MS.gene43375.t1 |
| chr1.4 | CDS | 32682663 | 32683468 | 32682663 | ID=cds.MS.gene43375.t1;Parent=MS.gene43375.t1 |
| chr1.4 | exon | 32681866 | 32682407 | 32681866 | ID=MS.gene43375.t1.exon4;Parent=MS.gene43375.t1 |
| chr1.4 | CDS | 32681866 | 32682407 | 32681866 | ID=cds.MS.gene43375.t1;Parent=MS.gene43375.t1 |
| Gene Sequence |
| Protein sequence |
