Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44366.t1 | XP_003613218.1 | 100 | 710 | 0 | 0 | 1 | 710 | 99 | 808 | 0.00E+00 | 1430.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44366.t1 | P42347 | 95.1 | 710 | 35 | 0 | 1 | 710 | 105 | 814 | 0.0e+00 | 1360.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44366.t1 | Q8GUA6 | 100.0 | 710 | 0 | 0 | 1 | 710 | 99 | 808 | 0.0e+00 | 1430.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene44366 | 0.817212 | 3.71E-52 | -1.69E-46 |
| MS.gene049404 | MS.gene44366 | 0.816303 | 5.93E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene44366 | 0.819969 | 8.78E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene44366 | 0.811037 | 8.55E-51 | -1.69E-46 |
| MS.gene050561 | MS.gene44366 | 0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene44366 | 0.802156 | 6.41E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene44366 | 0.809747 | 1.62E-50 | -1.69E-46 |
| MS.gene052502 | MS.gene44366 | 0.81024 | 1.27E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene44366 | 0.814575 | 1.44E-51 | -1.69E-46 |
| MS.gene052675 | MS.gene44366 | 0.818386 | 2.01E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene44366 | 0.819107 | 1.38E-52 | -1.69E-46 |
| MS.gene052826 | MS.gene44366 | 0.809741 | 1.63E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene44366 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene44366 | 0.805617 | 1.22E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene44366 | 0.81327 | 2.79E-51 | -1.69E-46 |
| MS.gene055230 | MS.gene44366 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene44366 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene44366 | 0.829195 | 5.90E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene44366 | 0.827501 | 1.51E-54 | -1.69E-46 |
| MS.gene057155 | MS.gene44366 | 0.806584 | 7.66E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene44366 | 0.816547 | 5.23E-52 | -1.69E-46 |
| MS.gene057855 | MS.gene44366 | 0.801664 | 8.09E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene44366 | 0.81074 | 9.92E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene44366 | 0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene44366 | 0.840202 | 1.00E-57 | -1.69E-46 |
| MS.gene058979 | MS.gene44366 | 0.832148 | 1.11E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene44366 | 0.811376 | 7.22E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene44366 | 0.813485 | 2.50E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene44366 | 0.817178 | 3.77E-52 | -1.69E-46 |
| MS.gene060935 | MS.gene44366 | 0.826791 | 2.24E-54 | -1.69E-46 |
| MS.gene060937 | MS.gene44366 | 0.817166 | 3.80E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene44366 | MS.gene66405 | PPI |
| MS.gene44366 | MS.gene66413 | PPI |
| MS.gene059541 | MS.gene44366 | PPI |
| MS.gene44366 | MS.gene063319 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44366.t1 | MTR_5g034120 | 100.000 | 710 | 0 | 0 | 1 | 710 | 99 | 808 | 0.0 | 1465 |
| MS.gene44366.t1 | MTR_3g116250 | 28.778 | 483 | 293 | 19 | 236 | 690 | 1555 | 2014 | 2.28e-34 | 142 |
| MS.gene44366.t1 | MTR_8g093570 | 33.906 | 233 | 141 | 6 | 457 | 679 | 829 | 1058 | 2.43e-27 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44366.t1 | AT1G60490 | 86.255 | 713 | 94 | 3 | 1 | 710 | 103 | 814 | 0.0 | 1272 |
| MS.gene44366.t1 | AT1G49340 | 27.477 | 535 | 336 | 19 | 176 | 683 | 1491 | 2000 | 2.07e-38 | 154 |
| MS.gene44366.t1 | AT1G49340 | 27.477 | 535 | 336 | 19 | 176 | 683 | 1491 | 2000 | 2.07e-38 | 154 |
| MS.gene44366.t1 | AT1G49340 | 27.477 | 535 | 336 | 19 | 176 | 683 | 1484 | 1993 | 2.12e-38 | 154 |
| MS.gene44366.t1 | AT1G49340 | 27.477 | 535 | 336 | 19 | 176 | 683 | 1484 | 1993 | 2.12e-38 | 154 |
| MS.gene44366.t1 | AT5G64070 | 33.617 | 235 | 139 | 7 | 457 | 679 | 861 | 1090 | 3.67e-28 | 122 |
| MS.gene44366.t1 | AT5G09350 | 33.906 | 233 | 141 | 6 | 457 | 679 | 856 | 1085 | 5.56e-28 | 121 |
| MS.gene44366.t1 | AT1G51040 | 28.956 | 297 | 178 | 11 | 413 | 690 | 222 | 504 | 1.53e-19 | 93.2 |
Find 152 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAAAATAGATTTAAAATT+AGG | 0.176506 | 5.1:+25032196 | None:intergenic |
| CCTGATGATCATGGGCCTTT+TGG | 0.206214 | 5.1:-25033749 | MS.gene44366:CDS |
| TAGATTTAAAATTAGGTTAC+TGG | 0.212396 | 5.1:+25032203 | None:intergenic |
| TGTTCAAATGGTATCGTTAA+TGG | 0.238019 | 5.1:-25034697 | MS.gene44366:CDS |
| AAGCTTAGACAGCTACTTTC+TGG | 0.244205 | 5.1:-25035289 | MS.gene44366:CDS |
| GCCAGTCCACTCGTTGAATT+TGG | 0.248295 | 5.1:+25039442 | None:intergenic |
| ATAGCTTCTGATCCTGAAAA+AGG | 0.252329 | 5.1:-25032147 | MS.gene44366:CDS |
| TTCATCGTTGGGCTCAATAT+TGG | 0.265072 | 5.1:-25031928 | MS.gene44366:CDS |
| ACTTGAACCTTGTATAATAT+TGG | 0.282964 | 5.1:+25032262 | None:intergenic |
| TTACTGCACATATGAAATTC+TGG | 0.297436 | 5.1:-25035921 | MS.gene44366:CDS |
| AGAAGCTATGTCCGGAATAT+TGG | 0.311004 | 5.1:+25032161 | None:intergenic |
| ATGACCCTACATATGCAAAA+AGG | 0.322562 | 5.1:-25035946 | MS.gene44366:CDS |
| TGCACATTATTAACCTTTCC+AGG | 0.328164 | 5.1:+25039630 | None:intergenic |
| AGCTTCATTGGTGGCGGAAA+TGG | 0.339940 | 5.1:+25032428 | None:intergenic |
| AATTTCTTCGTTGTGTTGAA+TGG | 0.348338 | 5.1:-25037453 | MS.gene44366:CDS |
| ATTTCCTTGCAGAGCTTCAT+TGG | 0.349240 | 5.1:+25032416 | None:intergenic |
| TTACTTGCTCCAATTGGTTC+AGG | 0.349986 | 5.1:-25036173 | MS.gene44366:CDS |
| AGCATTAAGCAATATTGAAT+TGG | 0.350124 | 5.1:-25036005 | MS.gene44366:CDS |
| GACCAATACCTCATCAAAAT+AGG | 0.353005 | 5.1:+25035249 | None:intergenic |
| AAAGACTTCCATCGTCTCTT+AGG | 0.355332 | 5.1:+25032492 | None:intergenic |
| CCATACAAGGTTCTAGCAAC+TGG | 0.356646 | 5.1:-25034633 | MS.gene44366:CDS |
| CCAATGATATTGTTATTGTC+TGG | 0.358804 | 5.1:-25038397 | MS.gene44366:CDS |
| ATTTAAACGGTGGCAGAGTT+TGG | 0.367837 | 5.1:-25035398 | MS.gene44366:CDS |
| GGAAGCAAAAGCTTAGGCTT+TGG | 0.380644 | 5.1:-25039692 | MS.gene44366:CDS |
| TCGCCTCACATTCAAAACTA+TGG | 0.381640 | 5.1:-25039415 | MS.gene44366:CDS |
| GGAAAAGTTTCGGTTGGACT+TGG | 0.385873 | 5.1:-25032032 | MS.gene44366:CDS |
| ATCACATATATACTTGGTAT+TGG | 0.386539 | 5.1:-25033671 | MS.gene44366:CDS |
| TCTCATGGTGAAGGATTGAT+TGG | 0.388746 | 5.1:-25039762 | MS.gene44366:CDS |
| GAAGCAAAAGCTTAGGCTTT+GGG | 0.388788 | 5.1:-25039691 | MS.gene44366:CDS |
| TTAGGTCCCTAGGCATGAAC+GGG | 0.395425 | 5.1:-25039511 | MS.gene44366:intron |
| TCCAATTGGTTCAGGCTCTT+CGG | 0.397784 | 5.1:-25036165 | MS.gene44366:CDS |
| ATCCCAGTGATGAGCACATC+TGG | 0.403063 | 5.1:+25035044 | None:intergenic |
| TACTTTCTCTCATTTGAGCT+TGG | 0.405483 | 5.1:+25038281 | None:intergenic |
| CCCTACCTGTGCTAATGAAC+GGG | 0.416972 | 5.1:+25034578 | None:intergenic |
| TTCTTTGATGTCTGAGAAGA+GGG | 0.418191 | 5.1:-25037485 | MS.gene44366:CDS |
| AATGGCGGGTTCCAATATTC+CGG | 0.423699 | 5.1:-25032172 | MS.gene44366:CDS |
| TACAGCTCCAGGAAAAGTTT+CGG | 0.427922 | 5.1:-25032042 | MS.gene44366:intron |
| CCAGTTGCTAGAACCTTGTA+TGG | 0.430909 | 5.1:+25034633 | None:intergenic |
| ACACCAGATGTGCTCATCAC+TGG | 0.432555 | 5.1:-25035047 | MS.gene44366:CDS |
| ATTGGTGGCGGAAATGGCTT+AGG | 0.435687 | 5.1:+25032434 | None:intergenic |
| GTTGTATGCTTCACAACAAT+AGG | 0.437263 | 5.1:+25032239 | None:intergenic |
| GAAACAAGCACTAGAATTGA+TGG | 0.437691 | 5.1:-25036912 | MS.gene44366:CDS |
| ATATCATTGGTCGAAGCTAT+AGG | 0.441914 | 5.1:+25038410 | None:intergenic |
| CAAGGAAATGGTTGAGGCTA+TGG | 0.443471 | 5.1:-25032402 | MS.gene44366:CDS |
| AGCCTGTATACATTTCTTCC+AGG | 0.443637 | 5.1:-25032002 | MS.gene44366:CDS |
| AATTGGCAAGCTTTCTTCGC+TGG | 0.446366 | 5.1:-25035988 | MS.gene44366:CDS |
| AATGAAGCTCTGCAAGGAAA+TGG | 0.448445 | 5.1:-25032414 | MS.gene44366:CDS |
| TCAATGTTACTTGCTCCAAT+TGG | 0.451060 | 5.1:-25036179 | MS.gene44366:CDS |
| CCAAAAGGCCCATGATCATC+AGG | 0.453310 | 5.1:+25033749 | None:intergenic |
| CGCTCTCGTTGATAAGATCC+TGG | 0.454719 | 5.1:+25031984 | None:intergenic |
| GTGAAGCATACAACATTCTT+CGG | 0.454783 | 5.1:-25032230 | MS.gene44366:CDS |
| GGTTGAGACCATTCATCGTT+GGG | 0.455522 | 5.1:-25031939 | MS.gene44366:CDS |
| CCAGACAATAACAATATCAT+TGG | 0.466559 | 5.1:+25038397 | None:intergenic |
| ACCGAAGAGCCTGAACCAAT+TGG | 0.466842 | 5.1:+25036164 | None:intergenic |
| CAATGATATTGTTATTGTCT+GGG | 0.467655 | 5.1:-25038396 | MS.gene44366:CDS |
| GCAGGAATACCAACTGGTCC+TGG | 0.471798 | 5.1:+25034907 | None:intergenic |
| TATAAACGTTTCAAGACAGT+TGG | 0.477924 | 5.1:+25033718 | None:intergenic |
| GGACTTTGAGTGGAGATGAT+AGG | 0.478943 | 5.1:-25037531 | MS.gene44366:CDS |
| TGGGATCTTTCTCATGGTGA+AGG | 0.482025 | 5.1:-25039771 | MS.gene44366:CDS |
| TCTCCACTCAAAGTCCTTGT+TGG | 0.482283 | 5.1:+25037538 | None:intergenic |
| GCCAAATTCAACGAGTGGAC+TGG | 0.484095 | 5.1:-25039443 | MS.gene44366:CDS |
| CTTGCAGCCAATATTATACA+AGG | 0.485228 | 5.1:-25032269 | MS.gene44366:intron |
| TCAGGATCAGAAGCTATGTC+CGG | 0.491939 | 5.1:+25032153 | None:intergenic |
| CAGGTTTGGGATCTTTCTCA+TGG | 0.498015 | 5.1:-25039777 | MS.gene44366:CDS |
| CACCAGATGTGCTCATCACT+GGG | 0.498800 | 5.1:-25035046 | MS.gene44366:CDS |
| ATCCTGGAAGAAATGTATAC+AGG | 0.501151 | 5.1:+25032000 | None:intergenic |
| ACCAAGTATATATGTGATAA+CGG | 0.501900 | 5.1:+25033676 | None:intergenic |
| GACACCACGGGTTAAACTCC+TGG | 0.502225 | 5.1:+25038322 | None:intergenic |
| TGTGTCCTCATTAGGTCCCT+AGG | 0.503314 | 5.1:-25039521 | MS.gene44366:intron |
| ACCTTTCCAGGTGTAGAAGT+AGG | 0.504443 | 5.1:+25039642 | None:intergenic |
| ATATTGAGCCCAACGATGAA+TGG | 0.507424 | 5.1:+25031931 | None:intergenic |
| TTTAACTGTTTATGCTCAGA+GGG | 0.508499 | 5.1:+25038350 | None:intergenic |
| CCTTTCCAGGTGTAGAAGTA+GGG | 0.509565 | 5.1:+25039643 | None:intergenic |
| ATACTTCAATATTCTCTGAA+TGG | 0.509593 | 5.1:+25037564 | None:intergenic |
| TCCATCCCGTTCATTAGCAC+AGG | 0.513341 | 5.1:-25034583 | MS.gene44366:intron |
| ATAAACAGTTAAAGCTGGCC+AGG | 0.513701 | 5.1:-25038340 | MS.gene44366:CDS |
| AAGCTTTCTTCGCTGGTATG+TGG | 0.517061 | 5.1:-25035981 | MS.gene44366:CDS |
| GGTGCAAACGGAGAGGAAGA+TGG | 0.517256 | 5.1:-25035421 | MS.gene44366:CDS |
| CTAGCAACTGGGCAAGATGA+AGG | 0.518120 | 5.1:-25034621 | MS.gene44366:CDS |
| CAAAACTATGGAGAAAATCA+AGG | 0.518753 | 5.1:-25039403 | MS.gene44366:CDS |
| CCACTCAAAGTCCTTGTTGG+TGG | 0.523782 | 5.1:+25037541 | None:intergenic |
| CAAAAGCTTAGGCTTTGGGC+AGG | 0.524104 | 5.1:-25039687 | MS.gene44366:CDS |
| TTAAATATTGATGACTCTGA+GGG | 0.524865 | 5.1:+25035017 | None:intergenic |
| CAGATGGGAGCTGGTGCAAA+CGG | 0.525919 | 5.1:-25035433 | MS.gene44366:CDS |
| TCCGTTATCACATATATACT+TGG | 0.530140 | 5.1:-25033677 | MS.gene44366:CDS |
| TCCTTGCAGAGCTTCATTGG+TGG | 0.531959 | 5.1:+25032419 | None:intergenic |
| TGTTGAATGGAGTGATGTAC+AGG | 0.532745 | 5.1:-25037440 | MS.gene44366:intron |
| CCCTACTTCTACACCTGGAA+AGG | 0.534797 | 5.1:-25039643 | MS.gene44366:intron |
| CAGTTGGCTGTAATTCCAAA+AGG | 0.534886 | 5.1:+25033734 | None:intergenic |
| TTCCATCGTCTCTTAGGAGG+AGG | 0.535524 | 5.1:+25032498 | None:intergenic |
| TTTCTTTGATGTCTGAGAAG+AGG | 0.535885 | 5.1:-25037486 | MS.gene44366:CDS |
| TTGCAGAGCTTCATTGGTGG+CGG | 0.538044 | 5.1:+25032422 | None:intergenic |
| GAGTGCATTGTTCCCTCAGA+TGG | 0.538202 | 5.1:-25031960 | MS.gene44366:CDS |
| GATTGACGTTTGTGATGCAC+TGG | 0.539342 | 5.1:-25036876 | MS.gene44366:CDS |
| CCAAAATCTCAGATGGGAGC+TGG | 0.541918 | 5.1:-25035442 | MS.gene44366:intron |
| CACTAGAATTGATGGGCAAG+TGG | 0.544415 | 5.1:-25036904 | MS.gene44366:CDS |
| GCTCCAGGAAAAGTTTCGGT+TGG | 0.551085 | 5.1:-25032038 | MS.gene44366:CDS |
| GTTCAATCACTAGAGATGTC+AGG | 0.551302 | 5.1:-25035345 | MS.gene44366:CDS |
| ATTAGGTCCCTAGGCATGAA+CGG | 0.552317 | 5.1:-25039512 | MS.gene44366:intron |
| TCTGCATTTAACTCCATACA+AGG | 0.553089 | 5.1:-25034646 | MS.gene44366:CDS |
| GGTGTCAGAGGTGATCGTAT+TGG | 0.554165 | 5.1:+25035065 | None:intergenic |
| TGAATGGTCTCAACCATCTG+AGG | 0.555119 | 5.1:+25031947 | None:intergenic |
| AAGGAAATGGTTGAGGCTAT+GGG | 0.556476 | 5.1:-25032401 | MS.gene44366:CDS |
| CATGGTGAAGGATTGATTGG+AGG | 0.557450 | 5.1:-25039759 | MS.gene44366:CDS |
| TTTAAATATTGATGACTCTG+AGG | 0.558343 | 5.1:+25035016 | None:intergenic |
| GAGAGGAAGATGGATTTAAA+CGG | 0.558804 | 5.1:-25035411 | MS.gene44366:CDS |
| AGGCTATGGGTGGAGCTGAA+AGG | 0.561462 | 5.1:-25032388 | MS.gene44366:intron |
| ATATACTTGGTATTGGAGAC+AGG | 0.562402 | 5.1:-25033664 | MS.gene44366:intron |
| AGACTGGGAAGCAAAAGCTT+AGG | 0.563123 | 5.1:-25039698 | MS.gene44366:CDS |
| ACCCTACCTGTGCTAATGAA+CGG | 0.563767 | 5.1:+25034577 | None:intergenic |
| TGAGCATAAACAGTTAAAGC+TGG | 0.564717 | 5.1:-25038345 | MS.gene44366:CDS |
| TGGTTGAGACCATTCATCGT+TGG | 0.569134 | 5.1:-25031940 | MS.gene44366:CDS |
| TCTGGAGGAGTATATGATGA+AGG | 0.572902 | 5.1:-25035903 | MS.gene44366:intron |
| TGGGCAAGATGAAGGCATGT+TGG | 0.574569 | 5.1:-25034613 | MS.gene44366:CDS |
| GCTCTGCAAGGAAATGGTTG+AGG | 0.577513 | 5.1:-25032408 | MS.gene44366:CDS |
| GACTTCCATCGTCTCTTAGG+AGG | 0.577553 | 5.1:+25032495 | None:intergenic |
| GTTGTTAAAGAGAAGAATTG+TGG | 0.583980 | 5.1:+25039734 | None:intergenic |
| GGTCCCTAGGCATGAACGGG+GGG | 0.585456 | 5.1:-25039508 | MS.gene44366:CDS |
| TATTGTCTGGGACCCAGAAG+TGG | 0.588125 | 5.1:-25038384 | MS.gene44366:CDS |
| TCTTCTTCTGTGTATTACCT+CGG | 0.588947 | 5.1:+25035317 | None:intergenic |
| CTTTAACTGTTTATGCTCAG+AGG | 0.591757 | 5.1:+25038349 | None:intergenic |
| ATCTCTGTCTATGACACCAC+GGG | 0.595270 | 5.1:+25038310 | None:intergenic |
| TGGAAGTGCTCATTTGTATG+TGG | 0.595283 | 5.1:-25039361 | MS.gene44366:CDS |
| ACTAGAATTGATGGGCAAGT+GGG | 0.598933 | 5.1:-25036903 | MS.gene44366:CDS |
| TTGGTCGAAGCTATAGGAGA+TGG | 0.600468 | 5.1:+25038416 | None:intergenic |
| CCACCAACAAGGACTTTGAG+TGG | 0.604075 | 5.1:-25037541 | MS.gene44366:CDS |
| GAGATGATAGGCAACTCTTG+TGG | 0.604236 | 5.1:-25037519 | MS.gene44366:CDS |
| CGATCTTCGCCAGGACCAGT+TGG | 0.607072 | 5.1:-25034916 | MS.gene44366:intron |
| ACATTCCCTACTTCTACACC+TGG | 0.610568 | 5.1:-25039648 | MS.gene44366:CDS |
| CATACAAGGTTCTAGCAACT+GGG | 0.611041 | 5.1:-25034632 | MS.gene44366:CDS |
| AAACAAGCACTAGAATTGAT+GGG | 0.614052 | 5.1:-25036911 | MS.gene44366:CDS |
| TGGGCAGGAAAAGAAGCAGA+TGG | 0.617410 | 5.1:-25039672 | MS.gene44366:CDS |
| ACCTGTGCTAATGAACGGGA+TGG | 0.618260 | 5.1:+25034582 | None:intergenic |
| AACCTCCTCCTAAGAGACGA+TGG | 0.624022 | 5.1:-25032500 | MS.gene44366:CDS |
| ATTGTCTGGGACCCAGAAGT+GGG | 0.631740 | 5.1:-25038383 | MS.gene44366:CDS |
| GCCACCAATGAAGCTCTGCA+AGG | 0.636272 | 5.1:-25032420 | MS.gene44366:CDS |
| AGGTCCCTAGGCATGAACGG+GGG | 0.637589 | 5.1:-25039509 | MS.gene44366:CDS |
| GAATAAAACCAAAATCAACA+TGG | 0.639157 | 5.1:+25032468 | None:intergenic |
| GCGAGGCCAAATTCAACGAG+TGG | 0.647883 | 5.1:-25039448 | MS.gene44366:CDS |
| GAACACTCACTGCATAAGCA+CGG | 0.655020 | 5.1:+25036227 | None:intergenic |
| GAAATGGTTGAGGCTATGGG+TGG | 0.659442 | 5.1:-25032398 | MS.gene44366:CDS |
| TAGGTCCCTAGGCATGAACG+GGG | 0.661850 | 5.1:-25039510 | MS.gene44366:CDS |
| ATGAGCACATCTGGTGTCAG+AGG | 0.665902 | 5.1:+25035053 | None:intergenic |
| GAATGGTCTCAACCATCTGA+GGG | 0.666217 | 5.1:+25031948 | None:intergenic |
| CTGCACATATGAAATTCTGG+AGG | 0.666533 | 5.1:-25035918 | MS.gene44366:CDS |
| ACCCCATGCACATACCACGC+TGG | 0.667482 | 5.1:+25036101 | None:intergenic |
| GGGAGCTGGTGCAAACGGAG+AGG | 0.679178 | 5.1:-25035428 | MS.gene44366:CDS |
| AGGAAGATGGATTTAAACGG+TGG | 0.680685 | 5.1:-25035408 | MS.gene44366:CDS |
| GATCTCTGTCTATGACACCA+CGG | 0.681065 | 5.1:+25038309 | None:intergenic |
| TATTGAAGTATCCACCAACA+AGG | 0.699350 | 5.1:-25037552 | MS.gene44366:CDS |
| AGAGATGTCAGGAATGTCCG+AGG | 0.705449 | 5.1:-25035334 | MS.gene44366:CDS |
| CTGGCCAGGAGTTTAACCCG+TGG | 0.725449 | 5.1:-25038326 | MS.gene44366:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 25031922 | 25039796 | 25031922 | ID=MS.gene44366 |
| chr5.1 | mRNA | 25031922 | 25039796 | 25031922 | ID=MS.gene44366.t1;Parent=MS.gene44366 |
| chr5.1 | exon | 25039644 | 25039796 | 25039644 | ID=MS.gene44366.t1.exon1;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25039644 | 25039796 | 25039644 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25039320 | 25039529 | 25039320 | ID=MS.gene44366.t1.exon2;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25039320 | 25039529 | 25039320 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25038284 | 25038462 | 25038284 | ID=MS.gene44366.t1.exon3;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25038284 | 25038462 | 25038284 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25037441 | 25037588 | 25037441 | ID=MS.gene44366.t1.exon4;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25037441 | 25037588 | 25037441 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25036844 | 25036939 | 25036844 | ID=MS.gene44366.t1.exon5;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25036844 | 25036939 | 25036844 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25036116 | 25036251 | 25036116 | ID=MS.gene44366.t1.exon6;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25036116 | 25036251 | 25036116 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25035904 | 25036025 | 25035904 | ID=MS.gene44366.t1.exon7;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25035904 | 25036025 | 25035904 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25035258 | 25035452 | 25035258 | ID=MS.gene44366.t1.exon8;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25035258 | 25035452 | 25035258 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25034917 | 25035087 | 25034917 | ID=MS.gene44366.t1.exon9;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25034917 | 25035087 | 25034917 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25034584 | 25034721 | 25034584 | ID=MS.gene44366.t1.exon10;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25034584 | 25034721 | 25034584 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25033665 | 25033819 | 25033665 | ID=MS.gene44366.t1.exon11;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25033665 | 25033819 | 25033665 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25032389 | 25032532 | 25032389 | ID=MS.gene44366.t1.exon12;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25032389 | 25032532 | 25032389 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25032137 | 25032284 | 25032137 | ID=MS.gene44366.t1.exon13;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25032137 | 25032284 | 25032137 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| chr5.1 | exon | 25031922 | 25032059 | 25031922 | ID=MS.gene44366.t1.exon14;Parent=MS.gene44366.t1 |
| chr5.1 | CDS | 25031922 | 25032059 | 25031922 | ID=cds.MS.gene44366.t1;Parent=MS.gene44366.t1 |
| Gene Sequence |
| Protein sequence |
