AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50186

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50186.t1 MTR_5g071520 96.725 458 15 0 1 458 59 516 0.0 927
MS.gene50186.t1 MTR_2g098790 70.897 457 124 1 1 457 58 505 0.0 691
MS.gene50186.t1 MTR_2g098540 71.616 458 121 1 1 458 51 499 0.0 691
MS.gene50186.t1 MTR_2g098540 71.616 458 121 1 1 458 7 455 0.0 689
MS.gene50186.t1 MTR_2g098520 69.214 458 132 1 1 458 54 502 0.0 667
MS.gene50186.t1 MTR_6g078450 68.490 457 135 1 1 457 56 503 0.0 656
MS.gene50186.t1 MTR_4g066580 68.271 457 136 1 1 457 59 506 0.0 650
MS.gene50186.t1 MTR_3g028720 67.834 457 138 1 1 457 58 505 0.0 648
MS.gene50186.t1 MTR_4g066590 67.177 457 141 1 1 457 53 500 0.0 644
MS.gene50186.t1 MTR_4g066630 66.302 457 145 1 1 457 59 506 0.0 637
MS.gene50186.t1 MTR_4g066240 65.284 458 150 1 1 458 56 504 0.0 634
MS.gene50186.t1 MTR_6g078330 66.302 457 145 1 1 457 57 504 0.0 633
MS.gene50186.t1 MTR_4g066240 65.142 459 150 2 1 458 56 505 0.0 630
MS.gene50186.t1 MTR_6g078380 66.376 458 144 2 1 457 56 504 0.0 624
MS.gene50186.t1 MTR_4g066210 63.319 458 159 1 1 458 63 511 0.0 615
MS.gene50186.t1 MTR_4g066340 65.831 439 140 2 21 458 2 431 0.0 608
MS.gene50186.t1 MTR_4g066330 63.043 460 133 3 1 458 61 485 0.0 598
MS.gene50186.t1 MTR_4g066640 61.874 459 162 3 1 458 59 505 0.0 594
MS.gene50186.t1 MTR_6g078450 68.613 411 120 1 1 411 56 457 0.0 590
MS.gene50186.t1 MTR_4g066280 61.522 460 140 3 1 458 61 485 0.0 590
MS.gene50186.t1 MTR_3g026280 61.220 459 160 4 1 457 42 484 0.0 577
MS.gene50186.t1 MTR_3g028720 67.153 411 126 1 1 411 58 459 0.0 576
MS.gene50186.t1 MTR_6g078330 65.526 409 132 1 49 457 1 400 0.0 561
MS.gene50186.t1 MTR_4g066630 64.634 410 136 1 1 410 59 459 0.0 559
MS.gene50186.t1 MTR_4g023000 59.737 457 169 4 1 457 44 485 0.0 558
MS.gene50186.t1 MTR_3g028720 68.533 375 109 1 1 375 58 423 0.0 538
MS.gene50186.t1 MTR_4g066580 68.533 375 109 1 1 375 59 424 0.0 538
MS.gene50186.t1 MTR_6g078330 63.728 397 133 2 61 457 15 400 0.0 527
MS.gene50186.t1 MTR_4g066630 65.867 375 119 1 1 375 59 424 0.0 524
MS.gene50186.t1 MTR_4g066240 64.533 375 124 1 1 375 56 421 0.0 517
MS.gene50186.t1 MTR_4g067040 66.391 363 113 1 1 363 54 407 2.17e-179 508
MS.gene50186.t1 MTR_4g015420 53.992 476 158 8 1 458 85 517 1.18e-176 505
MS.gene50186.t1 MTR_3g028720 68.935 338 96 1 1 338 58 386 2.39e-172 489
MS.gene50186.t1 MTR_2g043200 55.603 464 163 7 1 458 85 511 9.16e-172 493
MS.gene50186.t1 MTR_4g067040 68.343 338 98 1 1 338 54 382 1.33e-171 487
MS.gene50186.t1 MTR_3g026400 52.851 456 202 4 2 457 27 469 1.44e-171 491
MS.gene50186.t1 MTR_3g026400 52.851 456 202 4 2 457 58 500 2.59e-171 491
MS.gene50186.t1 MTR_3g026620 53.070 456 201 4 2 457 59 501 1.78e-170 489
MS.gene50186.t1 MTR_4g083000 52.814 462 200 6 1 458 48 495 2.24e-169 486
MS.gene50186.t1 MTR_4g015460 53.305 469 171 10 1 458 62 493 6.61e-164 472
MS.gene50186.t1 MTR_4g066630 66.265 332 103 1 1 332 59 381 1.29e-163 466
MS.gene50186.t1 MTR_5g044000 50.433 462 212 7 1 458 66 514 1.68e-159 461
MS.gene50186.t1 MTR_6g078330 65.741 324 102 1 1 324 57 371 1.49e-158 454
MS.gene50186.t1 MTR_4g066640 61.224 343 120 3 1 342 59 389 4.74e-155 445
MS.gene50186.t1 MTR_0110s0040 49.123 456 216 6 2 457 64 503 4.63e-153 445
MS.gene50186.t1 MTR_4g081530 48.590 461 222 5 1 458 44 492 3.39e-152 442
MS.gene50186.t1 MTR_3g033810 48.366 459 209 8 2 457 42 475 2.89e-149 434
MS.gene50186.t1 MTR_0110s0030 47.807 456 222 6 2 457 64 503 3.30e-149 435
MS.gene50186.t1 MTR_4g083000 52.415 414 180 5 49 458 1 401 5.13e-147 426
MS.gene50186.t1 MTR_4g131810 46.522 460 232 5 1 457 48 496 7.08e-147 429
MS.gene50186.t1 MTR_3g033790 46.272 456 222 6 2 457 40 472 1.96e-143 419
MS.gene50186.t1 MTR_2g022760 47.516 463 221 6 1 457 56 502 4.59e-143 419
MS.gene50186.t1 MTR_2g079580 44.111 467 229 7 2 458 53 497 2.44e-134 397
MS.gene50186.t1 MTR_4g131800 46.739 460 230 7 1 458 536 982 3.77e-134 412
MS.gene50186.t1 MTR_2g079550 44.111 467 229 7 2 458 51 495 8.40e-134 396
MS.gene50186.t1 MTR_7g068910 45.435 460 226 7 1 458 51 487 5.19e-133 394
MS.gene50186.t1 MTR_2g022710 43.137 459 246 6 1 457 55 500 6.47e-132 391
MS.gene50186.t1 MTR_7g068910 44.468 470 226 8 1 458 51 497 9.77e-130 385
MS.gene50186.t1 MTR_7g033860 44.009 459 233 5 2 458 69 505 1.46e-129 385
MS.gene50186.t1 MTR_4g016920 43.534 464 225 8 2 457 48 482 3.79e-127 379
MS.gene50186.t1 MTR_5g068740 43.413 463 228 10 2 458 48 482 3.54e-124 371
MS.gene50186.t1 MTR_2g022760 46.506 415 200 6 49 457 1 399 4.69e-122 362
MS.gene50186.t1 MTR_1g088610 44.086 465 221 10 2 458 48 481 8.35e-122 369
MS.gene50186.t1 MTR_1g088610 37.273 110 62 3 350 458 503 606 2.81e-12 69.3
MS.gene50186.t1 MTR_3g026400 54.232 319 134 3 2 320 58 364 7.89e-121 357
MS.gene50186.t1 MTR_0108s0030 40.919 457 232 4 2 458 24 442 8.97e-120 358
MS.gene50186.t1 MTR_2g022710 41.849 411 225 5 49 457 1 399 1.55e-113 340
MS.gene50186.t1 MTR_7g068900 43.269 416 215 5 44 458 17 412 2.68e-113 342
MS.gene50186.t1 MTR_2g022710 41.889 413 226 5 1 411 55 455 9.26e-113 340
MS.gene50186.t1 MTR_2g022710 41.889 413 226 5 1 411 55 455 1.83e-112 340
MS.gene50186.t1 MTR_2g079580 45.312 384 179 6 2 375 53 415 1.99e-111 335
MS.gene50186.t1 MTR_4g016920 42.926 417 202 7 49 457 1 389 1.01e-110 333
MS.gene50186.t1 MTR_1g088630 40.435 460 221 9 2 458 16 425 2.00e-108 328
MS.gene50186.t1 MTR_2g022710 43.501 377 199 5 1 375 55 419 3.18e-108 327
MS.gene50186.t1 MTR_7g051610 42.129 451 232 6 2 451 96 518 7.08e-108 330
MS.gene50186.t1 MTR_7g051510 41.907 451 233 7 2 451 96 518 7.17e-107 327
MS.gene50186.t1 MTR_0110s0040 49.068 322 151 4 2 323 64 372 1.86e-106 322
MS.gene50186.t1 MTR_7g051650 41.595 464 231 10 2 458 96 526 1.94e-106 326
MS.gene50186.t1 MTR_7g051650 41.432 461 232 10 2 458 96 522 1.24e-105 324
MS.gene50186.t1 MTR_2g022710 43.014 365 194 5 1 363 55 407 3.26e-102 311
MS.gene50186.t1 MTR_7g056747 40.767 417 212 5 43 458 9 391 5.81e-96 295
MS.gene50186.t1 MTR_2g022710 46.129 310 155 4 1 310 55 352 1.22e-95 295
MS.gene50186.t1 MTR_4g016920 49.645 282 130 3 49 329 1 271 2.55e-91 280
MS.gene50186.t1 MTR_1g088630 44.377 329 143 6 2 328 48 338 4.07e-88 273
MS.gene50186.t1 MTR_1g088630 48.592 284 119 6 2 284 48 305 7.22e-83 258
MS.gene50186.t1 MTR_0110s0020 50.467 214 102 3 2 215 64 273 5.98e-71 227
MS.gene50186.t1 MTR_5g069350 61.818 165 22 5 304 458 48 181 2.20e-52 175
MS.gene50186.t1 MTR_4g122980 25.476 420 227 13 45 456 183 524 1.31e-27 116
MS.gene50186.t1 MTR_8g038650 45.055 91 50 0 221 311 62 152 5.38e-22 92.8
MS.gene50186.t1 MTR_4g061170 53.125 64 22 2 390 451 7 64 3.36e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50186.t1 AT5G42260 55.240 458 190 5 2 458 52 495 0.0 521
MS.gene50186.t1 AT5G44640 54.367 458 194 5 2 458 52 495 0.0 518
MS.gene50186.t1 AT2G44450 54.486 457 194 3 2 458 52 494 0.0 517
MS.gene50186.t1 AT2G44480 53.947 456 200 2 2 457 56 501 2.05e-180 514
MS.gene50186.t1 AT2G44480 53.947 456 200 2 2 457 87 532 4.28e-180 515
MS.gene50186.t1 AT3G60130 54.803 458 192 4 2 458 51 494 2.10e-178 509
MS.gene50186.t1 AT5G24550 52.381 462 206 6 1 458 52 503 5.40e-175 501
MS.gene50186.t1 AT2G25630 51.965 458 188 5 2 458 51 477 7.00e-169 484
MS.gene50186.t1 AT5G24540 53.145 461 202 6 1 457 52 502 5.88e-167 481
MS.gene50186.t1 AT3G60140 49.892 461 218 5 1 458 46 496 9.29e-167 482
MS.gene50186.t1 AT1G51470 51.965 458 199 6 2 458 66 503 2.89e-163 471
MS.gene50186.t1 AT1G47600 51.627 461 196 7 2 458 66 503 6.48e-163 470
MS.gene50186.t1 AT1G26560 51.193 461 210 6 1 458 52 500 4.03e-162 468
MS.gene50186.t1 AT1G47600 51.193 461 197 7 2 458 66 502 8.18e-162 467
MS.gene50186.t1 AT5G54570 49.892 461 217 4 1 458 50 499 1.72e-161 467
MS.gene50186.t1 AT2G44480 53.056 409 182 2 49 457 1 399 1.40e-159 457
MS.gene50186.t1 AT2G44470 48.366 459 224 5 2 457 50 498 1.60e-159 464
MS.gene50186.t1 AT3G60130 54.197 417 176 4 43 458 40 442 6.49e-159 458
MS.gene50186.t1 AT2G44460 50.435 460 214 5 1 457 49 497 7.47e-156 454
MS.gene50186.t1 AT3G18080 48.908 458 217 7 2 458 60 501 5.19e-152 442
MS.gene50186.t1 AT3G60130 52.758 417 171 5 43 458 40 431 4.98e-151 437
MS.gene50186.t1 AT2G44490 45.887 462 235 5 1 457 34 485 1.99e-150 440
MS.gene50186.t1 AT3G60120 48.596 463 218 7 1 457 34 482 4.41e-149 436
MS.gene50186.t1 AT3G03640 47.516 463 228 4 1 458 54 506 3.27e-148 433
MS.gene50186.t1 AT5G25980 49.095 442 210 6 9 447 75 504 5.58e-148 433
MS.gene50186.t1 AT3G18070 47.817 458 212 9 2 457 51 483 7.94e-147 428
MS.gene50186.t1 AT3G18070 47.817 458 218 9 2 457 51 489 6.26e-146 426
MS.gene50186.t1 AT5G36890 47.702 457 217 5 2 457 37 472 1.35e-145 425
MS.gene50186.t1 AT5G36890 47.702 457 217 5 2 457 37 472 1.94e-145 424
MS.gene50186.t1 AT5G24540 51.816 413 186 5 1 410 52 454 8.31e-145 422
MS.gene50186.t1 AT2G32860 46.739 460 233 4 2 458 115 565 3.71e-143 423
MS.gene50186.t1 AT2G32860 46.623 459 234 4 2 458 115 564 3.84e-143 423
MS.gene50186.t1 AT5G54570 48.426 413 200 3 1 411 50 451 2.84e-140 410
MS.gene50186.t1 AT2G44470 47.202 411 205 4 2 410 50 450 9.30e-140 409
MS.gene50186.t1 AT3G09260 46.087 460 234 5 2 458 56 504 1.08e-139 411
MS.gene50186.t1 AT5G54570 49.153 413 196 4 49 458 1 402 1.75e-139 407
MS.gene50186.t1 AT5G26000 48.315 445 210 8 9 447 63 493 3.15e-139 410
MS.gene50186.t1 AT1G61820 46.087 460 233 6 1 457 50 497 1.00e-137 405
MS.gene50186.t1 AT3G60140 49.867 377 177 4 1 375 46 412 3.49e-136 400
MS.gene50186.t1 AT2G44450 53.221 357 153 3 102 458 1 343 2.80e-135 394
MS.gene50186.t1 AT3G21370 45.259 464 235 7 2 458 54 505 6.94e-134 396
MS.gene50186.t1 AT1G75940 45.842 469 227 9 2 458 58 511 7.99e-134 396
MS.gene50186.t1 AT4G27830 44.469 461 228 7 1 458 43 478 6.90e-133 393
MS.gene50186.t1 AT1G66280 46.204 461 231 6 2 458 57 504 3.23e-132 392
MS.gene50186.t1 AT5G28510 44.421 466 238 7 2 458 60 513 3.68e-132 392
MS.gene50186.t1 AT5G25980 47.901 405 197 5 9 411 75 467 6.07e-132 389
MS.gene50186.t1 AT5G25980 47.901 405 197 5 9 411 75 467 6.07e-132 389
MS.gene50186.t1 AT1G52400 45.043 464 234 9 2 458 60 509 6.30e-132 391
MS.gene50186.t1 AT1G52400 45.043 464 234 9 2 458 60 509 6.30e-132 391
MS.gene50186.t1 AT1G66270 45.987 461 232 6 2 458 57 504 1.03e-131 390
MS.gene50186.t1 AT1G02850 44.662 459 226 7 2 458 47 479 4.49e-131 388
MS.gene50186.t1 AT1G02850 44.304 474 229 8 2 458 47 502 5.62e-131 389
MS.gene50186.t1 AT1G61810 44.565 460 240 6 1 457 53 500 1.51e-130 387
MS.gene50186.t1 AT1G02850 44.632 475 227 9 2 458 47 503 4.80e-130 386
MS.gene50186.t1 AT1G61810 44.493 454 237 6 1 451 53 494 2.18e-129 385
MS.gene50186.t1 AT1G66270 45.553 461 232 7 2 458 57 502 4.02e-128 381
MS.gene50186.t1 AT4G21760 43.384 461 237 8 1 457 74 514 1.90e-126 378
MS.gene50186.t1 AT4G27820 43.384 461 231 7 1 458 43 476 6.04e-125 373
MS.gene50186.t1 AT4G21760 43.326 457 233 8 1 457 74 504 1.57e-123 370
MS.gene50186.t1 AT5G26000 47.059 408 197 7 9 411 63 456 8.92e-123 365
MS.gene50186.t1 AT4G22100 43.506 462 230 10 1 458 42 476 3.66e-122 365
MS.gene50186.t1 AT1G60090 42.950 461 230 9 1 457 44 475 6.54e-121 362
MS.gene50186.t1 AT1G02850 42.484 459 209 7 2 458 47 452 1.06e-119 358
MS.gene50186.t1 AT1G45191 42.208 462 236 9 1 458 49 483 8.30e-118 355
MS.gene50186.t1 AT1G60090 41.880 468 232 9 1 457 44 482 8.85e-118 355
MS.gene50186.t1 AT2G44480 57.292 288 113 2 2 289 87 364 2.76e-117 349
MS.gene50186.t1 AT3G62750 41.685 463 227 8 1 458 43 467 5.86e-117 352
MS.gene50186.t1 AT2G44470 49.226 323 153 3 2 323 50 362 9.42e-117 348
MS.gene50186.t1 AT3G62750 41.685 463 227 8 1 458 69 493 1.74e-116 352
MS.gene50186.t1 AT1G45191 42.457 464 237 10 1 458 49 488 1.02e-115 349
MS.gene50186.t1 AT1G45191 42.241 464 227 10 1 458 49 477 5.69e-115 347
MS.gene50186.t1 AT4G27830 43.826 413 206 6 49 458 1 390 1.10e-114 343
MS.gene50186.t1 AT1G45191 41.949 472 240 9 1 458 49 500 2.93e-114 346
MS.gene50186.t1 AT1G61810 44.175 412 215 6 49 457 1 400 1.65e-112 338
MS.gene50186.t1 AT1G02850 45.641 390 184 6 2 375 47 424 1.97e-112 338
MS.gene50186.t1 AT2G44460 49.584 361 169 4 100 457 1 351 8.71e-111 334
MS.gene50186.t1 AT3G62740 40.260 462 240 9 1 458 43 472 1.38e-110 336
MS.gene50186.t1 AT1G52400 43.855 415 213 8 2 410 60 460 7.06e-110 332
MS.gene50186.t1 AT5G48375 42.558 430 172 9 7 429 50 411 1.30e-108 328
MS.gene50186.t1 AT4G27820 42.373 413 213 6 49 458 1 391 1.50e-106 323
MS.gene50186.t1 AT4G27820 42.373 413 213 6 49 458 1 391 1.50e-106 323
MS.gene50186.t1 AT1G61810 43.122 378 201 5 1 375 53 419 1.27e-104 318
MS.gene50186.t1 AT3G62750 41.247 417 203 7 1 413 69 447 1.82e-103 316
MS.gene50186.t1 AT3G18070 48.171 328 154 6 132 457 99 412 6.70e-103 313
MS.gene50186.t1 AT1G51490 46.939 343 158 7 2 342 41 361 6.57e-100 305
MS.gene50186.t1 AT3G62740 40.678 413 210 8 1 410 43 423 7.09e-100 306
MS.gene50186.t1 AT1G61820 44.262 366 190 5 95 457 4 358 1.24e-99 303
MS.gene50186.t1 AT2G44480 48.333 300 145 2 158 457 6 295 3.23e-99 300
MS.gene50186.t1 AT3G62750 40.482 415 209 7 49 458 1 382 5.51e-99 303
MS.gene50186.t1 AT3G62750 40.482 415 209 7 49 458 1 382 5.51e-99 303
MS.gene50186.t1 AT3G18070 47.619 315 149 6 2 316 51 349 2.43e-98 300
MS.gene50186.t1 AT3G18070 47.771 314 148 6 146 457 1 300 4.51e-97 295
MS.gene50186.t1 AT1G45191 43.562 365 183 7 1 360 49 395 1.45e-96 296
MS.gene50186.t1 AT1G60270 47.742 310 146 4 1 310 44 337 6.52e-96 294
MS.gene50186.t1 AT1G45191 47.239 326 151 6 1 323 49 356 4.51e-95 293
MS.gene50186.t1 AT3G62750 45.659 311 144 4 1 311 43 328 6.60e-93 286
MS.gene50186.t1 AT3G62750 45.659 311 144 4 1 311 43 328 6.60e-93 286
MS.gene50186.t1 AT3G62750 45.659 311 144 4 1 311 69 354 7.71e-92 285
MS.gene50186.t1 AT1G61810 48.473 262 124 3 1 262 53 303 4.80e-83 258
MS.gene50186.t1 AT1G60270 48.092 262 124 3 49 310 1 250 3.19e-79 248
MS.gene50186.t1 AT3G18070 45.385 260 129 4 122 379 89 337 4.23e-73 234
MS.gene50186.t1 AT3G18070 45.763 236 115 4 146 379 1 225 2.33e-67 215
MS.gene50186.t1 AT5G16580 38.127 299 155 7 127 421 27 299 9.58e-54 182
MS.gene50186.t1 AT3G06510 24.582 419 234 14 44 456 159 501 5.21e-26 111
MS.gene50186.t1 AT3G06510 24.537 432 252 14 44 456 159 535 1.09e-25 110

Find 99 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTTGCTTCAAGGAATT+TGG 0.175350 5.2:+60384081 MS.gene50186:CDS
GTGATTTATGTTACCGAAAA+TGG 0.182534 5.2:+60387686 MS.gene50186:CDS
GTTTGTTCTTCATAGAAATT+TGG 0.195177 5.2:-60387230 None:intergenic
TCGGATTTGCTATTTGAAAA+TGG 0.225126 5.2:-60386750 None:intergenic
GGTATAGTAGTGTTTAAATT+AGG 0.291027 5.2:-60387323 None:intergenic
GAATAGCGTTACAATCTTAC+TGG 0.295505 5.2:+60386721 MS.gene50186:CDS
CATATCTTCAATCAGCAATT+AGG 0.314453 5.2:+60387901 MS.gene50186:CDS
AACTGCACCGGTGGTGATTC+GGG 0.316225 5.2:+60384213 MS.gene50186:CDS
CAACTGCACCGGTGGTGATT+CGG 0.319150 5.2:+60384212 MS.gene50186:CDS
AGGATCGGCGTAAATGTAAA+AGG 0.343637 5.2:+60388019 MS.gene50186:intron
GTGGCAAAGGAACAAGTATA+TGG 0.352894 5.2:+60382428 MS.gene50186:CDS
AGGTGATGTGCAACTAAATA+TGG 0.357699 5.2:-60384243 None:intergenic
AGTTTACAAGACAAAATATC+AGG 0.358750 5.2:+60384293 MS.gene50186:CDS
TCTTTGTGACACTATTTCAT+TGG 0.365955 5.2:+60383753 MS.gene50186:CDS
GGCGTGTTTACTTGTAAGAT+TGG 0.385319 5.2:-60387369 None:intergenic
AACAGTTTCATAAATCCAAT+TGG 0.400089 5.2:-60387632 None:intergenic
CTTTGTGACACTATTTCATT+GGG 0.408201 5.2:+60383754 MS.gene50186:CDS
AAGCCAAACTACATCTCAAA+AGG 0.417236 5.2:+60386689 MS.gene50186:CDS
TGATGGAAGCTGAGCGTAAC+GGG 0.422414 5.2:+60387476 MS.gene50186:intron
GCCATTGGATGAAGCACTTA+AGG 0.423757 5.2:+60387842 MS.gene50186:CDS
CACCTGGTAGATGTTCTGAT+TGG 0.427255 5.2:+60384181 MS.gene50186:CDS
TTATGCGGAGCTTTGCTTCA+AGG 0.431389 5.2:+60384074 MS.gene50186:CDS
CAAGCCTTGGAAGATGAGTA+TGG 0.432317 5.2:+60383785 MS.gene50186:CDS
ATCTGCAGGCTGCTTCAGAT+TGG 0.449425 5.2:+60387597 MS.gene50186:intron
AGTGTTTAAATTAGGTGCAT+TGG 0.449618 5.2:-60387315 None:intergenic
GAAGGGTACACAGTGAGGTT+TGG 0.454487 5.2:+60388082 MS.gene50186:CDS
TTGGAGATAGAGTGAAGTAC+TGG 0.459700 5.2:+60384100 MS.gene50186:CDS
AAATGATCCAACACTGCCAT+TGG 0.467997 5.2:+60387827 MS.gene50186:CDS
TTGGGATCTACCACAAGCCT+TGG 0.469228 5.2:+60383772 MS.gene50186:CDS
TCGTTCTGCAGCTCTTTCAT+CGG 0.469821 5.2:-60386769 None:intergenic
ATCAACGAGCTAATAGCTAA+TGG 0.475339 5.2:+60383639 MS.gene50186:CDS
AAAAGAACCGTTGAGTAGCC+TGG 0.477296 5.2:-60387252 None:intergenic
TTTATGACACCATTGACAAC+GGG 0.481807 5.2:+60387164 MS.gene50186:CDS
CGAGCAATTGACTTCATGCT+TGG 0.483028 5.2:+60386789 MS.gene50186:CDS
AAACTACATCTCAAAAGGGT+TGG 0.501705 5.2:+60386694 MS.gene50186:CDS
CAATTGACTTCATGCTTGGA+TGG 0.502651 5.2:+60386793 MS.gene50186:CDS
AATTGGATTTATGAAACTGT+TGG 0.508886 5.2:+60387634 MS.gene50186:CDS
AATGGAGATGTCTCTATTGA+CGG 0.510615 5.2:+60383183 MS.gene50186:CDS
AAGCACTTAAGGACATTGAC+AGG 0.512346 5.2:+60387853 MS.gene50186:CDS
ACATCTCAAAAGGGTTGGAT+AGG 0.516519 5.2:+60386699 MS.gene50186:CDS
ACCTGGATATTTGTGAGTAA+AGG 0.518207 5.2:-60382455 None:intergenic
ATATCCACCTGTGCAGTAAG+TGG 0.518356 5.2:-60384142 None:intergenic
TCCACAGCATATGCGATCCT+TGG 0.521221 5.2:+60387193 MS.gene50186:CDS
CTCTGTCCCCGAATCACCAC+CGG 0.522685 5.2:-60384220 None:intergenic
GCTTCATCCAATGGCAGTGT+TGG 0.523292 5.2:-60387834 None:intergenic
GAAACTGTTGGTCTACATCA+AGG 0.528541 5.2:+60387646 MS.gene50186:CDS
AGCCAAACTACATCTCAAAA+GGG 0.528542 5.2:+60386690 MS.gene50186:CDS
CGGGATACCCATCGGTCCAC+AGG 0.528693 5.2:+60387495 MS.gene50186:CDS
TCCTTAAGTGCTTCATCCAA+TGG 0.530336 5.2:-60387843 None:intergenic
AAAATAATCGACAGAAGCAA+TGG 0.531000 5.2:+60383165 MS.gene50186:CDS
TGGCAAAGGAACAAGTATAT+GGG 0.535012 5.2:+60382429 MS.gene50186:CDS
ACCTTTACTCACAAATATCC+AGG 0.535242 5.2:+60382454 MS.gene50186:CDS
TGTACGTACCTGTGGACCGA+TGG 0.536172 5.2:-60387503 None:intergenic
AATCACCACCGGTGCAGTTG+AGG 0.538856 5.2:-60384209 None:intergenic
GGATAGTCTCCCGTTGTCAA+TGG 0.543914 5.2:-60387173 None:intergenic
TTTACTTGTAAGATTGGCAA+GGG 0.545503 5.2:-60387363 None:intergenic
CAGCTGCATGAGCAAGGAGT+AGG 0.545859 5.2:-60384263 None:intergenic
AGTGAAGGCATTAATCAAGA+AGG 0.546336 5.2:+60383594 MS.gene50186:CDS
TGCCAATCAGAACATCTACC+AGG 0.549985 5.2:-60384183 None:intergenic
ATGGAGATGTCTCTATTGAC+GGG 0.561237 5.2:+60383184 MS.gene50186:CDS
CATACAGATTATCCATCTCA+TGG 0.567022 5.2:+60383429 MS.gene50186:CDS
ACAGTACGAAGGTGCTGCAA+AGG 0.568443 5.2:+60382402 None:intergenic
CAAAACCTCAACTGCACCGG+TGG 0.571508 5.2:+60384204 MS.gene50186:CDS
GTGAAGGCATTAATCAAGAA+GGG 0.572932 5.2:+60383595 MS.gene50186:CDS
GTACGTACCTGTGGACCGAT+GGG 0.575340 5.2:-60387502 None:intergenic
GAGCCATCCACTTACTGCAC+AGG 0.576206 5.2:+60384135 MS.gene50186:CDS
GAACAGCAGCTGCATGAGCA+AGG 0.577925 5.2:-60384269 None:intergenic
CCATCCACTTACTGCACAGG+TGG 0.578054 5.2:+60384138 MS.gene50186:CDS
TGGCAAAACCTCAACTGCAC+CGG 0.578800 5.2:+60384201 MS.gene50186:CDS
AGGGAATCTGTGAGATAGCA+AGG 0.579096 5.2:-60387344 None:intergenic
CAGCATATGCGATCCTTGGT+TGG 0.580100 5.2:+60387197 MS.gene50186:CDS
CCACCTGTGCAGTAAGTGGA+TGG 0.584090 5.2:-60384138 None:intergenic
TCTCTATTGACGGGTATCAT+CGG 0.585792 5.2:+60383193 MS.gene50186:CDS
AAACTATATTCACAGATGGA+AGG 0.587869 5.2:+60383568 MS.gene50186:intron
ACTGCACCGGTGGTGATTCG+GGG 0.591295 5.2:+60384214 MS.gene50186:CDS
GTTTACTTGTAAGATTGGCA+AGG 0.591321 5.2:-60387364 None:intergenic
TACTCATCTTCCAAGGCTTG+TGG 0.591984 5.2:-60383782 None:intergenic
TACGAAGGTGCTGCAAAGGA+AGG 0.593383 5.2:+60382406 MS.gene50186:CDS
GCTGCAAAGGAAGGTGGCAA+AGG 0.596234 5.2:+60382415 MS.gene50186:CDS
ACCAAGGATCGCATATGCTG+TGG 0.604539 5.2:-60387194 None:intergenic
TGGCAATCGTTGTCCAACCA+AGG 0.606391 5.2:-60387210 None:intergenic
TGACGGGTATCATCGGTACA+AGG 0.609706 5.2:+60383200 MS.gene50186:CDS
GTTTATGACACCATTGACAA+CGG 0.621613 5.2:+60387163 MS.gene50186:CDS
GAGCGTAACGGGATACCCAT+CGG 0.623116 5.2:+60387487 MS.gene50186:CDS
ACCTCCATACTCATCTTCCA+AGG 0.624004 5.2:-60383789 None:intergenic
TAGTATTCTAGACCATGAGA+TGG 0.627823 5.2:-60383441 None:intergenic
GTGATGGAAGCTGAGCGTAA+CGG 0.637510 5.2:+60387475 MS.gene50186:intron
CTGATTGAAGATATGAGAGA+TGG 0.643010 5.2:-60387893 None:intergenic
ATCAAAAGCTCTCAGCACAA+TGG 0.644647 5.2:+60388143 MS.gene50186:CDS
GAAGGTGCTGCAAAGGAAGG+TGG 0.645017 5.2:+60382409 MS.gene50186:CDS
ACAGATGGAAGGATAAGTGA+AGG 0.645708 5.2:+60383579 MS.gene50186:intron
GAACAAACCAGGCTACTCAA+CGG 0.670966 5.2:+60387245 MS.gene50186:CDS
ATTTCTATGAAGAACAAACC+AGG 0.671675 5.2:+60387234 MS.gene50186:CDS
GGGGTGAAGGGTACACAGTG+AGG 0.672260 5.2:+60388077 MS.gene50186:CDS
GTTAATGCGATATTTCCACC+TGG 0.681081 5.2:+60384165 MS.gene50186:CDS
TTATAATAAATACAGTACGA+AGG 0.705773 5.2:+60382391 None:intergenic
ATCGTCGCTTACACTATGCG+AGG 0.707258 5.2:-60383821 None:intergenic
GCCTTGGAAGATGAGTATGG+AGG 0.722664 5.2:+60383788 MS.gene50186:CDS
CAATCAGAACATCTACCAGG+TGG 0.737629 5.2:-60384180 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAGAAAAAACAAA+TGG + chr5.2:60386877-60386896 MS.gene50186:intron 10.0%
!!! ACATTATTTATTTTGAATTA+AGG - chr5.2:60382833-60382852 None:intergenic 10.0%
!!! ATGTGTTAATTATTTTTTTT+AGG + chr5.2:60382849-60382868 MS.gene50186:intron 10.0%
!!! TAATACTTTCTATTTTATTT+TGG + chr5.2:60387979-60387998 MS.gene50186:intron 10.0%
!!! TAATTTTTTTTGATTAAATG+TGG - chr5.2:60383543-60383562 None:intergenic 10.0%
!!! TGTGTTAATTATTTTTTTTA+GGG + chr5.2:60382850-60382869 MS.gene50186:intron 10.0%
!!! TGTTTTAATTATTGTAATTT+CGG - chr5.2:60382647-60382666 None:intergenic 10.0%
!!! TTGTTTTATTTTTTTTTTGA+AGG - chr5.2:60382768-60382787 None:intergenic 10.0%
!! AAATTATGAATCATTGTTAA+TGG + chr5.2:60386942-60386961 MS.gene50186:intron 15.0%
!! AAGTTCATAATTTCATATAT+AGG - chr5.2:60386842-60386861 None:intergenic 15.0%
!! AATATCAGTTTAAAAATTGT+AGG + chr5.2:60384422-60384441 MS.gene50186:intron 15.0%
!! AGTTCATAATTTCATATATA+GGG - chr5.2:60386841-60386860 None:intergenic 15.0%
!! TTAATTTAAAAGCTTTCTAA+AGG - chr5.2:60382500-60382519 None:intergenic 15.0%
!! TTCAAAATACATATACTATA+AGG + chr5.2:60383070-60383089 MS.gene50186:intron 15.0%
!!! AAAAAAGTTTATAGATGTTT+TGG + chr5.2:60382786-60382805 MS.gene50186:intron 15.0%
!!! ATAGAAAATTTGTTTTATAC+AGG + chr5.2:60383370-60383389 MS.gene50186:intron 15.0%
!!! GTTTACTTTTTATTTGAAAA+GGG - chr5.2:60385327-60385346 None:intergenic 15.0%
!!! GTTTTAATTATTGTAATTTC+GGG - chr5.2:60382646-60382665 None:intergenic 15.0%
!!! TTATAGTATATGTATTTTGA+AGG - chr5.2:60383071-60383090 None:intergenic 15.0%
!! AATAAAACTATATTCACAGA+TGG + chr5.2:60383564-60383583 MS.gene50186:intron 20.0%
!! AATTCTTATTGCCATATATA+TGG + chr5.2:60385960-60385979 MS.gene50186:intron 20.0%
!! ATGATATAAGTGATGAATAA+AGG - chr5.2:60387393-60387412 None:intergenic 20.0%
!! CATAACTTACATTTAATCAA+TGG + chr5.2:60383126-60383145 MS.gene50186:intron 20.0%
!! GTAGATCAAAATAAAATCAA+TGG - chr5.2:60387007-60387026 None:intergenic 20.0%
!!! AACTTTTAGAAATGATTTTC+GGG + chr5.2:60384050-60384069 MS.gene50186:intron 20.0%
!!! GAACTTTTAGAAATGATTTT+CGG + chr5.2:60384049-60384068 MS.gene50186:intron 20.0%
!!! GGTTTACTTTTTATTTGAAA+AGG - chr5.2:60385328-60385347 None:intergenic 20.0%
!!! TCTCAAACAAATTTTACTTT+AGG + chr5.2:60383285-60383304 MS.gene50186:intron 20.0%
!!! TGAAAAATTATTAGTTTTGC+AGG + chr5.2:60383722-60383741 MS.gene50186:intron 20.0%
!!! TTGTTGTAATTTACCATTTT+CGG - chr5.2:60387702-60387721 None:intergenic 20.0%
! AAAATCAATGGAAGAAATAG+AGG - chr5.2:60386995-60387014 None:intergenic 25.0%
! AAATCAATGGAAGAAATAGA+GGG - chr5.2:60386994-60387013 None:intergenic 25.0%
! AACAGTTTCATAAATCCAAT+TGG - chr5.2:60387635-60387654 None:intergenic 25.0%
! AAGAACAATCTTCTTAGTAT+CGG - chr5.2:60385795-60385814 None:intergenic 25.0%
! AATTGGATTTATGAAACTGT+TGG + chr5.2:60387634-60387653 MS.gene50186:CDS 25.0%
! ACAGTTTATAAACAAATGGT+TGG - chr5.2:60384495-60384514 None:intergenic 25.0%
! AGTTTACAAGACAAAATATC+AGG + chr5.2:60384293-60384312 MS.gene50186:CDS 25.0%
! CAGTTTAAAAATTGTAGGTA+AGG + chr5.2:60384427-60384446 MS.gene50186:intron 25.0%
! GGTATAGTAGTGTTTAAATT+AGG - chr5.2:60387326-60387345 None:intergenic 25.0%
! GTCTTACAAATTTCAAATGA+TGG - chr5.2:60385032-60385051 None:intergenic 25.0%
! GTTTGTTCTTCATAGAAATT+TGG - chr5.2:60387233-60387252 None:intergenic 25.0%
! TAGGAAATTATCAACTTACT+TGG - chr5.2:60383467-60383486 None:intergenic 25.0%
! TGTCACAGTTTATAAACAAA+TGG - chr5.2:60384499-60384518 None:intergenic 25.0%
! TGTGTCTATATACATAAGTT+TGG - chr5.2:60384365-60384384 None:intergenic 25.0%
! TTATGAATCATTGTTAATGG+TGG + chr5.2:60386945-60386964 MS.gene50186:intron 25.0%
! TTTGTGAATATACAAAGGAT+CGG + chr5.2:60388004-60388023 MS.gene50186:intron 25.0%
!! ATGTAAAAGGATATTTTGCA+TGG + chr5.2:60388032-60388051 MS.gene50186:CDS 25.0%
!! TGGTTTTTGTGAATATACAA+AGG + chr5.2:60387999-60388018 MS.gene50186:intron 25.0%
!!! AACGGTTCTTTTGATTTTAT+CGG + chr5.2:60387263-60387282 MS.gene50186:CDS 25.0%
!!! AAGGTTTAATTCTAGTTTGA+AGG - chr5.2:60382814-60382833 None:intergenic 25.0%
!!! ATGAATATGTGAACTTGTTT+TGG + chr5.2:60387760-60387779 MS.gene50186:intron 25.0%
!!! CAAATGAAGTTTTATCTTTC+TGG + chr5.2:60387539-60387558 MS.gene50186:intron 25.0%
!!! CTAATTAGAAGTATCAAGAA+TGG - chr5.2:60386464-60386483 None:intergenic 25.0%
!!! TGGTTTTATAGTTATCCAAT+TGG + chr5.2:60387617-60387636 MS.gene50186:CDS 25.0%
AAAAGAGGGTTAAGATGAAA+AGG + chr5.2:60386498-60386517 MS.gene50186:intron 30.0%
AAAATAATCGACAGAAGCAA+TGG + chr5.2:60383165-60383184 MS.gene50186:CDS 30.0%
AAACTATATTCACAGATGGA+AGG + chr5.2:60383568-60383587 MS.gene50186:intron 30.0%
AAGCTCAAACTCCATTTAAA+GGG + chr5.2:60386343-60386362 MS.gene50186:intron 30.0%
AAGTCAAATCTTGCAGTTAT+GGG + chr5.2:60386198-60386217 MS.gene50186:intron 30.0%
AATAGATAGATAGAGATACC+TGG - chr5.2:60382475-60382494 None:intergenic 30.0%
AGAAGATTGTTCTTTAGATC+AGG + chr5.2:60385801-60385820 MS.gene50186:intron 30.0%
AGAGTTTAGTAATTGTGAGT+TGG - chr5.2:60384801-60384820 None:intergenic 30.0%
AGATAAAACTTCATTTGACG+TGG - chr5.2:60387536-60387555 None:intergenic 30.0%
AGCAGAAGTAGAAAAATACA+AGG - chr5.2:60385142-60385161 None:intergenic 30.0%
AGTGTTTAAATTAGGTGCAT+TGG - chr5.2:60387318-60387337 None:intergenic 30.0%
ATTTCTATGAAGAACAAACC+AGG + chr5.2:60387234-60387253 MS.gene50186:CDS 30.0%
CAATCATGCTTGAATACAAT+GGG - chr5.2:60385401-60385420 None:intergenic 30.0%
CATATCTTCAATCAGCAATT+AGG + chr5.2:60387901-60387920 MS.gene50186:CDS 30.0%
CTTTGTGACACTATTTCATT+GGG + chr5.2:60383754-60383773 MS.gene50186:CDS 30.0%
GAGTTTAGTAATTGTGAGTT+GGG - chr5.2:60384800-60384819 None:intergenic 30.0%
GTGATTTATGTTACCGAAAA+TGG + chr5.2:60387686-60387705 MS.gene50186:CDS 30.0%
TAAAACTCAGAGATCATTCT+AGG - chr5.2:60385904-60385923 None:intergenic 30.0%
TAAAGTTTCCCATCCAAAAA+GGG - chr5.2:60385724-60385743 None:intergenic 30.0%
TAACTGCATTGTTTAAGGAT+AGG - chr5.2:60383486-60383505 None:intergenic 30.0%
TATTGAAATGAAGGACACTT+TGG - chr5.2:60386020-60386039 None:intergenic 30.0%
TCAATTGAAATCTCAATTGC+AGG + chr5.2:60387141-60387160 MS.gene50186:intron 30.0%
TCTTTGTGACACTATTTCAT+TGG + chr5.2:60383753-60383772 MS.gene50186:CDS 30.0%
TGACTGTAGTAGAAAAATGT+AGG - chr5.2:60385349-60385368 None:intergenic 30.0%
TGAGATCTTAAACATTAGAC+TGG + chr5.2:60385671-60385690 MS.gene50186:intron 30.0%
TGTGGTTCATATTGAAATGA+AGG - chr5.2:60386029-60386048 None:intergenic 30.0%
TTCAATCAGCAATTAGGTAA+TGG + chr5.2:60387907-60387926 MS.gene50186:intron 30.0%
TTTACTTGTAAGATTGGCAA+GGG - chr5.2:60387366-60387385 None:intergenic 30.0%
! AAAGGGTATATACCTTTGAA+AGG - chr5.2:60385310-60385329 None:intergenic 30.0%
! AAGGGTATATACCTTTGAAA+GGG - chr5.2:60385309-60385328 None:intergenic 30.0%
! CTAGTATATCATTTTGTGCA+TGG + chr5.2:60383930-60383949 MS.gene50186:intron 30.0%
! CTTGATAACTGCATTGTTTA+AGG - chr5.2:60383491-60383510 None:intergenic 30.0%
! GTTTTATACAGGAAGATGTT+GGG + chr5.2:60383381-60383400 MS.gene50186:intron 30.0%
! TATTCCCTCAAACTTTTGTT+GGG + chr5.2:60382989-60383008 MS.gene50186:intron 30.0%
! TGAATTATCAATCCCCTTTT+TGG + chr5.2:60385708-60385727 MS.gene50186:intron 30.0%
! TGTTTTATACAGGAAGATGT+TGG + chr5.2:60383380-60383399 MS.gene50186:intron 30.0%
! TTACTTTAGGTTTCACTCAA+TGG + chr5.2:60383298-60383317 MS.gene50186:intron 30.0%
! TTCTAAATTTTACGCCACAA+TGG + chr5.2:60383992-60384011 MS.gene50186:intron 30.0%
! TTTTCGGTAACATAAATCAC+TGG - chr5.2:60387686-60387705 None:intergenic 30.0%
!! AAATGATTTTCGGGATTATG+CGG + chr5.2:60384059-60384078 MS.gene50186:CDS 30.0%
!! GAAATTTTTCAGCTCTCTTA+TGG - chr5.2:60387123-60387142 None:intergenic 30.0%
!! TCGGATTTGCTATTTGAAAA+TGG - chr5.2:60386753-60386772 None:intergenic 30.0%
!!! ACCTTTGAAAGGGTTTTATT+TGG - chr5.2:60385299-60385318 None:intergenic 30.0%
!!! AGCTCTCTTATTTTTTGTGA+TGG + chr5.2:60387459-60387478 MS.gene50186:intron 30.0%
!!! TCATCTTAACCCTCTTTTTT+CGG - chr5.2:60386496-60386515 None:intergenic 30.0%
AAAGTTTCCCATCCAAAAAG+GGG - chr5.2:60385723-60385742 None:intergenic 35.0%
AACACATAGAATCCTTTCCA+AGG - chr5.2:60385482-60385501 None:intergenic 35.0%
AAGGATATGTGGATTCAATG+AGG - chr5.2:60386415-60386434 None:intergenic 35.0%
AATGGAGATGTCTCTATTGA+CGG + chr5.2:60383183-60383202 MS.gene50186:CDS 35.0%
ACCTGGATATTTGTGAGTAA+AGG - chr5.2:60382458-60382477 None:intergenic 35.0%
ACCTTTACTCACAAATATCC+AGG + chr5.2:60382454-60382473 MS.gene50186:CDS 35.0%
AGAAAGAGACTTTGACATGA+CGG - chr5.2:60384706-60384725 None:intergenic 35.0%
AGATGAAAATACATGCAGAG+AGG - chr5.2:60386260-60386279 None:intergenic 35.0%
AGGCTTAGAAGGTTATAGTA+TGG - chr5.2:60385558-60385577 None:intergenic 35.0%
AGGTGATGTGCAACTAAATA+TGG - chr5.2:60384246-60384265 None:intergenic 35.0%
ATAAACAAATGGTTGGCACT+TGG - chr5.2:60384488-60384507 None:intergenic 35.0%
ATATACTCCCAAACAGAATC+GGG - chr5.2:60385231-60385250 None:intergenic 35.0%
ATCAACGAGCTAATAGCTAA+TGG + chr5.2:60383639-60383658 MS.gene50186:CDS 35.0%
ATGATCATATCAGCCTTAAG+AGG - chr5.2:60385587-60385606 None:intergenic 35.0%
ATTACCCCAACAAAAGTTTG+AGG - chr5.2:60382997-60383016 None:intergenic 35.0%
CAAGCTCAAACTCCATTTAA+AGG + chr5.2:60386342-60386361 MS.gene50186:intron 35.0%
CAAGTCAAATCTTGCAGTTA+TGG + chr5.2:60386197-60386216 MS.gene50186:intron 35.0%
CACATGTATCATTAGCAAAG+TGG + chr5.2:60383230-60383249 MS.gene50186:intron 35.0%
CATACAGATTATCCATCTCA+TGG + chr5.2:60383429-60383448 MS.gene50186:CDS 35.0%
CATATACTCCCAAACAGAAT+CGG - chr5.2:60385232-60385251 None:intergenic 35.0%
CCAATCATGCTTGAATACAA+TGG - chr5.2:60385402-60385421 None:intergenic 35.0%
CCATGATTGTATATATCTGC+AGG + chr5.2:60387583-60387602 MS.gene50186:intron 35.0%
CCATTGTATTCAAGCATGAT+TGG + chr5.2:60385399-60385418 MS.gene50186:intron 35.0%
CCTGCAGATATATACAATCA+TGG - chr5.2:60387586-60387605 None:intergenic 35.0%
CCTTTGTCCTATACTGAAAA+TGG + chr5.2:60386165-60386184 MS.gene50186:intron 35.0%
CTGATTGAAGATATGAGAGA+TGG - chr5.2:60387896-60387915 None:intergenic 35.0%
CTTCTTTGACATATCTGCTA+AGG + chr5.2:60384613-60384632 MS.gene50186:intron 35.0%
GAATAGCGTTACAATCTTAC+TGG + chr5.2:60386721-60386740 MS.gene50186:CDS 35.0%
GAGAGGAATCAAAGGAAAAT+TGG - chr5.2:60385201-60385220 None:intergenic 35.0%
GAGATTGTATAGAATGCAGT+AGG - chr5.2:60384651-60384670 None:intergenic 35.0%
GATCATATATGCAATGCCAA+GGG + chr5.2:60385601-60385620 MS.gene50186:intron 35.0%
GATGAAAATACATGCAGAGA+GGG - chr5.2:60386259-60386278 None:intergenic 35.0%
GCAGATATATACAATCATGG+AGG - chr5.2:60387583-60387602 None:intergenic 35.0%
GCCAAATAAAACCCTTTCAA+AGG + chr5.2:60385295-60385314 MS.gene50186:intron 35.0%
GCTTAGAAGGTTATAGTATG+GGG - chr5.2:60385556-60385575 None:intergenic 35.0%
GGCTTAGAAGGTTATAGTAT+GGG - chr5.2:60385557-60385576 None:intergenic 35.0%
GGGAATATGAAGATATGTGT+AGG - chr5.2:60385864-60385883 None:intergenic 35.0%
GTAAAGTTTCCCATCCAAAA+AGG - chr5.2:60385725-60385744 None:intergenic 35.0%
GTATTGAAGCAAATAGACAC+AGG - chr5.2:60387953-60387972 None:intergenic 35.0%
GTTTACTTGTAAGATTGGCA+AGG - chr5.2:60387367-60387386 None:intergenic 35.0%
GTTTATGACACCATTGACAA+CGG + chr5.2:60387163-60387182 MS.gene50186:CDS 35.0%
TAAGCCTACTTATCCTCTTA+AGG + chr5.2:60385571-60385590 MS.gene50186:intron 35.0%
TAAGGTCTACAAGCTAAGAA+AGG - chr5.2:60384906-60384925 None:intergenic 35.0%
TACACACATTGCTACAAAAC+AGG + chr5.2:60385635-60385654 MS.gene50186:intron 35.0%
TAGTATTCTAGACCATGAGA+TGG - chr5.2:60383444-60383463 None:intergenic 35.0%
TAGTGAAATGTTCAGAGTGT+CGG - chr5.2:60385927-60385946 None:intergenic 35.0%
TCAGTATAGGACAAAGGATA+TGG - chr5.2:60386162-60386181 None:intergenic 35.0%
TCAGTATGAGTTTCCTACTT+GGG - chr5.2:60386101-60386120 None:intergenic 35.0%
TCTTGATAAAGACACGACAA+AGG - chr5.2:60386434-60386453 None:intergenic 35.0%
TGATCATATATGCAATGCCA+AGG + chr5.2:60385600-60385619 MS.gene50186:intron 35.0%
TGCCATATATATGGTAGATG+CGG + chr5.2:60385969-60385988 MS.gene50186:intron 35.0%
TGGAAGAAATAGAGGGAAAA+AGG - chr5.2:60386987-60387006 None:intergenic 35.0%
TGGAATCAAGTGAGTCTTTA+AGG - chr5.2:60385181-60385200 None:intergenic 35.0%
TGGCAAAGGAACAAGTATAT+GGG + chr5.2:60382429-60382448 MS.gene50186:CDS 35.0%
TGTCGTGTCTTTATCAAGAA+TGG + chr5.2:60386435-60386454 MS.gene50186:intron 35.0%
TTAAATGGAGTTTGAGCTTG+CGG - chr5.2:60386342-60386361 None:intergenic 35.0%
TTACCCCAACAAAAGTTTGA+GGG - chr5.2:60382996-60383015 None:intergenic 35.0%
TTCAGTATGAGTTTCCTACT+TGG - chr5.2:60386102-60386121 None:intergenic 35.0%
TTTATGACACCATTGACAAC+GGG + chr5.2:60387164-60387183 MS.gene50186:CDS 35.0%
! AATGAAGGACACTTTGGAAA+AGG - chr5.2:60386014-60386033 None:intergenic 35.0%
! ACAATTTTGAATGGGGTGAA+GGG + chr5.2:60388065-60388084 MS.gene50186:CDS 35.0%
! AGAGGAAGAAATGTTGTTTG+TGG - chr5.2:60386047-60386066 None:intergenic 35.0%
! ATTCCCTCAAACTTTTGTTG+GGG + chr5.2:60382990-60383009 MS.gene50186:intron 35.0%
! CCATTTTCAGTATAGGACAA+AGG - chr5.2:60386168-60386187 None:intergenic 35.0%
! CTGTTGGACAATTTTGAATG+GGG + chr5.2:60388058-60388077 MS.gene50186:CDS 35.0%
! GCTGTTGGACAATTTTGAAT+GGG + chr5.2:60388057-60388076 MS.gene50186:CDS 35.0%
! GTATTCCCTCAAACTTTTGT+TGG + chr5.2:60382988-60383007 MS.gene50186:intron 35.0%
! TATCAATCCCCTTTTTGGAT+GGG + chr5.2:60385713-60385732 MS.gene50186:intron 35.0%
! TTATCAATCCCCTTTTTGGA+TGG + chr5.2:60385712-60385731 MS.gene50186:intron 35.0%
! TTTTTAACATCGTGATGTGG+TGG - chr5.2:60384981-60385000 None:intergenic 35.0%
!! AGTGAAGGCATTAATCAAGA+AGG + chr5.2:60383594-60383613 MS.gene50186:CDS 35.0%
!! CATGAATGAACTTGATTTGC+AGG + chr5.2:60387792-60387811 MS.gene50186:intron 35.0%
!! CATTCTAGGATGATGGTTAA+GGG - chr5.2:60385890-60385909 None:intergenic 35.0%
!! GCTAAAAGTGTCACATGTTA+GGG - chr5.2:60386129-60386148 None:intergenic 35.0%
!! GTGAAGGCATTAATCAAGAA+GGG + chr5.2:60383595-60383614 MS.gene50186:CDS 35.0%
!! TCATTCTAGGATGATGGTTA+AGG - chr5.2:60385891-60385910 None:intergenic 35.0%
!! TGCTAAAAGTGTCACATGTT+AGG - chr5.2:60386130-60386149 None:intergenic 35.0%
!! TGCTTTTTAACATCGTGATG+TGG - chr5.2:60384984-60385003 None:intergenic 35.0%
!! TTCCTCTAGATTTTGAAAGC+AGG + chr5.2:60384847-60384866 MS.gene50186:intron 35.0%
!!! ATTTTTTTGTAGCGCCATTG+TGG - chr5.2:60384009-60384028 None:intergenic 35.0%
!!! GTTTGGCTTTTAAGCAACAA+TGG - chr5.2:60386678-60386697 None:intergenic 35.0%
AAAGCTGGATGATGCATCAA+AGG - chr5.2:60385527-60385546 None:intergenic 40.0%
AAATGATCCAACACTGCCAT+TGG + chr5.2:60387827-60387846 MS.gene50186:CDS 40.0%
AAGACACGACAAAGGATATG+TGG - chr5.2:60386426-60386445 None:intergenic 40.0%
AAGCACTTAAGGACATTGAC+AGG + chr5.2:60387853-60387872 MS.gene50186:CDS 40.0%
AAGGCATGGAGAAGAAGATA+AGG - chr5.2:60384924-60384943 None:intergenic 40.0%
ACACATTGCTACAAAACAGG+TGG + chr5.2:60385638-60385657 MS.gene50186:intron 40.0%
ACAGATGGAAGGATAAGTGA+AGG + chr5.2:60383579-60383598 MS.gene50186:intron 40.0%
AGAGGATAAGTAGGCTTAGA+AGG - chr5.2:60385569-60385588 None:intergenic 40.0%
AGCAGCCACAAGGATATAAA+AGG - chr5.2:60384943-60384962 None:intergenic 40.0%
AGGATCGGCGTAAATGTAAA+AGG + chr5.2:60388019-60388038 MS.gene50186:intron 40.0%
AGTATATGCTGCATCAGATG+AGG + chr5.2:60385244-60385263 MS.gene50186:intron 40.0%
ATGGAGATGTCTCTATTGAC+GGG + chr5.2:60383184-60383203 MS.gene50186:CDS 40.0%
ATTATGAGTCCAATTGTCCG+AGG - chr5.2:60384559-60384578 None:intergenic 40.0%
CACCTTCATCCGAAAAAAGA+GGG + chr5.2:60386484-60386503 MS.gene50186:intron 40.0%
CATAGAATCCTTTCCAAGGA+AGG - chr5.2:60385478-60385497 None:intergenic 40.0%
CCACAAGGATATAAAAGGCA+TGG - chr5.2:60384938-60384957 None:intergenic 40.0%
GAGCTTTGCTTCAAGGAATT+TGG + chr5.2:60384081-60384100 MS.gene50186:CDS 40.0%
GGCGTGTTTACTTGTAAGAT+TGG - chr5.2:60387372-60387391 None:intergenic 40.0%
GTAATCAACACCAAGTTGCT+GGG + chr5.2:60385092-60385111 MS.gene50186:intron 40.0%
GTAGATGACTTGATATTCGC+AGG - chr5.2:60384769-60384788 None:intergenic 40.0%
GTCCTGCTTTCAAAATCTAG+AGG - chr5.2:60384852-60384871 None:intergenic 40.0%
GTGAGAGTCTAAATTACTGC+AGG + chr5.2:60386650-60386669 MS.gene50186:intron 40.0%
GTGGCAAAGGAACAAGTATA+TGG + chr5.2:60382428-60382447 MS.gene50186:CDS 40.0%
GTTAATGCGATATTTCCACC+TGG + chr5.2:60384165-60384184 MS.gene50186:CDS 40.0%
TAGATGCGGCATGAATCAAA+AGG + chr5.2:60385983-60386002 MS.gene50186:intron 40.0%
TCAGCCTTAAGAGGATAAGT+AGG - chr5.2:60385578-60385597 None:intergenic 40.0%
TCCTTAAAAGTCTGTACCCT+CGG + chr5.2:60384539-60384558 MS.gene50186:intron 40.0%
TCCTTAAGTGCTTCATCCAA+TGG - chr5.2:60387846-60387865 None:intergenic 40.0%
TCTATACAATCTCAACACCC+TGG + chr5.2:60384658-60384677 MS.gene50186:intron 40.0%
TGCCGCATCTACCATATATA+TGG - chr5.2:60385974-60385993 None:intergenic 40.0%
TGCTTGTCAAGACTGATGAA+AGG - chr5.2:60384825-60384844 None:intergenic 40.0%
TGTAATCAACACCAAGTTGC+TGG + chr5.2:60385091-60385110 MS.gene50186:intron 40.0%
TTATGAGTCCAATTGTCCGA+GGG - chr5.2:60384558-60384577 None:intergenic 40.0%
TTGATCCACGCTAACATATG+TGG - chr5.2:60385426-60385445 None:intergenic 40.0%
TTGGAGATAGAGTGAAGTAC+TGG + chr5.2:60384100-60384119 MS.gene50186:CDS 40.0%
TTGGATGGGAAACTTTACAC+TGG + chr5.2:60385727-60385746 MS.gene50186:intron 40.0%
TTTGCTTTCTCATCCCAAGT+AGG + chr5.2:60386085-60386104 MS.gene50186:intron 40.0%
! AGGACACTTTGGAAAAGGTA+TGG - chr5.2:60386009-60386028 None:intergenic 40.0%
! AGGATGATGGTTAAGGGAAA+GGG - chr5.2:60385884-60385903 None:intergenic 40.0%
! ATATTTTGCATGGTCGCTGT+TGG + chr5.2:60388042-60388061 MS.gene50186:CDS 40.0%
! ATCATTGTTAATGGTGGTGC+AGG + chr5.2:60386951-60386970 MS.gene50186:intron 40.0%
! CAATTGACTTCATGCTTGGA+TGG + chr5.2:60386793-60386812 MS.gene50186:CDS 40.0%
! CCATGCCTTTTATATCCTTG+TGG + chr5.2:60384935-60384954 MS.gene50186:intron 40.0%
! CGCTGTTGGACAATTTTGAA+TGG + chr5.2:60388056-60388075 MS.gene50186:CDS 40.0%
! GAAACTGTTGGTCTACATCA+AGG + chr5.2:60387646-60387665 MS.gene50186:CDS 40.0%
! GAAGTATCAAGGATCTACCA+AGG - chr5.2:60386390-60386409 None:intergenic 40.0%
! GACAATTTTGAATGGGGTGA+AGG + chr5.2:60388064-60388083 MS.gene50186:CDS 40.0%
! GTCTGCTCCATTTTCAGTAT+AGG - chr5.2:60386175-60386194 None:intergenic 40.0%
! TAGGATGATGGTTAAGGGAA+AGG - chr5.2:60385885-60385904 None:intergenic 40.0%
! TCTCTATTGACGGGTATCAT+CGG + chr5.2:60383193-60383212 MS.gene50186:CDS 40.0%
!! AGGGTACAGACTTTTAAGGA+CGG - chr5.2:60384539-60384558 None:intergenic 40.0%
!! CAGAGATCATTCTAGGATGA+TGG - chr5.2:60385897-60385916 None:intergenic 40.0%
!! TCAATGAGGCAGAAGTATCA+AGG - chr5.2:60386401-60386420 None:intergenic 40.0%
!!! AACCCTCTTTTTTCGGATGA+AGG - chr5.2:60386489-60386508 None:intergenic 40.0%
AAAAGAACCGTTGAGTAGCC+TGG - chr5.2:60387255-60387274 None:intergenic 45.0%
AAAGAAGTCTGCGAGAGATG+TGG - chr5.2:60384600-60384619 None:intergenic 45.0%
AAGGCTCGTCTATCAGCAAA+GGG - chr5.2:60385123-60385142 None:intergenic 45.0%
ACCTCCATACTCATCTTCCA+AGG - chr5.2:60383792-60383811 None:intergenic 45.0%
AGGGAATCTGTGAGATAGCA+AGG - chr5.2:60387347-60387366 None:intergenic 45.0%
AGTATGGGGTTTGTCAAAGC+TGG - chr5.2:60385542-60385561 None:intergenic 45.0%
ATATCCACCTGTGCAGTAAG+TGG - chr5.2:60384145-60384164 None:intergenic 45.0%
ATCTTGCAGTTATGGGTCTG+AGG + chr5.2:60386205-60386224 MS.gene50186:intron 45.0%
CAAGCCTTGGAAGATGAGTA+TGG + chr5.2:60383785-60383804 MS.gene50186:CDS 45.0%
CAATCAGAACATCTACCAGG+TGG - chr5.2:60384183-60384202 None:intergenic 45.0%
CACCTGGTAGATGTTCTGAT+TGG + chr5.2:60384181-60384200 MS.gene50186:CDS 45.0%
CCTGACTGTTGTCTTTCAAC+CGG - chr5.2:60385754-60385773 None:intergenic 45.0%
CTATGCAGAGTTTGACGAAG+AGG - chr5.2:60386065-60386084 None:intergenic 45.0%
GAACAAACCAGGCTACTCAA+CGG + chr5.2:60387245-60387264 MS.gene50186:CDS 45.0%
GAGTGTATAGCAGTGTAGCT+AGG + chr5.2:60383964-60383983 MS.gene50186:intron 45.0%
GCACCTTCATCCGAAAAAAG+AGG + chr5.2:60386483-60386502 MS.gene50186:intron 45.0%
GCAGCTACAAGCCCTTTAAA+TGG - chr5.2:60386357-60386376 None:intergenic 45.0%
GCTGCTAGATGAGATACACA+TGG - chr5.2:60385054-60385073 None:intergenic 45.0%
GTGTAGGCAGCGTTATTCAA+GGG - chr5.2:60385848-60385867 None:intergenic 45.0%
GTGTATCTCATCTAGCAGCA+GGG + chr5.2:60385055-60385074 MS.gene50186:intron 45.0%
TACAATCTCAACACCCTGGT+AGG + chr5.2:60384662-60384681 MS.gene50186:intron 45.0%
TACTCATCTTCCAAGGCTTG+TGG - chr5.2:60383785-60383804 None:intergenic 45.0%
TCAGGTTCTTCTCTTGCAAC+TGG + chr5.2:60385769-60385788 MS.gene50186:intron 45.0%
TCGTTCTGCAGCTCTTTCAT+CGG - chr5.2:60386772-60386791 None:intergenic 45.0%
TGCCAATCAGAACATCTACC+AGG - chr5.2:60384186-60384205 None:intergenic 45.0%
TGGGAAACTTTACACTGGTC+CGG + chr5.2:60385732-60385751 MS.gene50186:intron 45.0%
TGTAGGCAGCGTTATTCAAG+GGG - chr5.2:60385847-60385866 None:intergenic 45.0%
TGTGTAGGCAGCGTTATTCA+AGG - chr5.2:60385849-60385868 None:intergenic 45.0%
TGTGTATCTCATCTAGCAGC+AGG + chr5.2:60385054-60385073 MS.gene50186:intron 45.0%
TTATGCGGAGCTTTGCTTCA+AGG + chr5.2:60384074-60384093 MS.gene50186:CDS 45.0%
TTGGTCCACATATGTTAGCG+TGG + chr5.2:60385418-60385437 MS.gene50186:intron 45.0%
! CGAGCAATTGACTTCATGCT+TGG + chr5.2:60386789-60386808 MS.gene50186:CDS 45.0%
! GCCATTGGATGAAGCACTTA+AGG + chr5.2:60387842-60387861 MS.gene50186:CDS 45.0%
!! AGACTTTGACATGACGGACT+TGG - chr5.2:60384700-60384719 None:intergenic 45.0%
!! GACTTTGACATGACGGACTT+GGG - chr5.2:60384699-60384718 None:intergenic 45.0%
!! GACTTTTAAGGACGGAAGTG+CGG - chr5.2:60384531-60384550 None:intergenic 45.0%
!! TCCGAGGGTACAGACTTTTA+AGG - chr5.2:60384543-60384562 None:intergenic 45.0%
!! ATTATTTATATTATTCATAT+GGG - chr5.2:60382591-60382610 None:intergenic 5.0%
!! TATTATTTATATTATTCATA+TGG - chr5.2:60382592-60382611 None:intergenic 5.0%
AAGGGATACTCCCAGCAACT+TGG - chr5.2:60385105-60385124 None:intergenic 50.0%
AATGGTTGGCACTTGGCACT+TGG - chr5.2:60384481-60384500 None:intergenic 50.0%
ACCAAGGATCGCATATGCTG+TGG - chr5.2:60387197-60387216 None:intergenic 50.0%
AGCTGCACCCGATTCTGTTT+GGG + chr5.2:60385221-60385240 MS.gene50186:intron 50.0%
AGTCTGCGAGAGATGTGGAA+TGG - chr5.2:60384595-60384614 None:intergenic 50.0%
AGTCTGTACCCTCGGACAAT+TGG + chr5.2:60384547-60384566 MS.gene50186:intron 50.0%
ATCGTCGCTTACACTATGCG+AGG - chr5.2:60383824-60383843 None:intergenic 50.0%
ATCTGCAGGCTGCTTCAGAT+TGG + chr5.2:60387597-60387616 MS.gene50186:intron 50.0%
ATTTGGCGTTTGCGCAGTGA+CGG - chr5.2:60385282-60385301 None:intergenic 50.0%
CAAGGCTCGTCTATCAGCAA+AGG - chr5.2:60385124-60385143 None:intergenic 50.0%
CAGCATATGCGATCCTTGGT+TGG + chr5.2:60387197-60387216 MS.gene50186:CDS 50.0%
CCATGAAGCCTTCCTTGGAA+AGG + chr5.2:60385467-60385486 MS.gene50186:intron 50.0%
CCGGTTGAAAGACAACAGTC+AGG + chr5.2:60385751-60385770 MS.gene50186:intron 50.0%
CCTTTCCAAGGAAGGCTTCA+TGG - chr5.2:60385470-60385489 None:intergenic 50.0%
GACTTTGTTGAGCAGCCACA+AGG - chr5.2:60384953-60384972 None:intergenic 50.0%
GCCTTGGAAGATGAGTATGG+AGG + chr5.2:60383788-60383807 MS.gene50186:CDS 50.0%
GCTTCATCCAATGGCAGTGT+TGG - chr5.2:60387837-60387856 None:intergenic 50.0%
GGATAGTCTCCCGTTGTCAA+TGG - chr5.2:60387176-60387195 None:intergenic 50.0%
GTCACACTTGTACGTACCTG+TGG - chr5.2:60387514-60387533 None:intergenic 50.0%
GTGCAGCTGAGAGGAATCAA+AGG - chr5.2:60385209-60385228 None:intergenic 50.0%
GTTCTCCATGAAGCCTTCCT+TGG + chr5.2:60385462-60385481 MS.gene50186:intron 50.0%
TACGACGCGCTTGGTACAAA+AGG - chr5.2:60384880-60384899 None:intergenic 50.0%
TAGCTGCGCTTGTTTCACCT+TGG + chr5.2:60386370-60386389 MS.gene50186:intron 50.0%
TCCACAGCATATGCGATCCT+TGG + chr5.2:60387193-60387212 MS.gene50186:CDS 50.0%
TGATGGAAGCTGAGCGTAAC+GGG + chr5.2:60387476-60387495 MS.gene50186:intron 50.0%
TGGCAAAACCTCAACTGCAC+CGG + chr5.2:60384201-60384220 MS.gene50186:CDS 50.0%
TGGCAATCGTTGTCCAACCA+AGG - chr5.2:60387213-60387232 None:intergenic 50.0%
TTGGGATCTACCACAAGCCT+TGG + chr5.2:60383772-60383791 MS.gene50186:CDS 50.0%
! GAAGGGTACACAGTGAGGTT+TGG + chr5.2:60388082-60388101 MS.gene50186:CDS 50.0%
! GTGATGGAAGCTGAGCGTAA+CGG + chr5.2:60387475-60387494 MS.gene50186:intron 50.0%
! TATGCAATGCCAAGGGTGTG+TGG + chr5.2:60385608-60385627 MS.gene50186:intron 50.0%
! TGACGGGTATCATCGGTACA+AGG + chr5.2:60383200-60383219 MS.gene50186:CDS 50.0%
!! TACGAAGGTGCTGCAAAGGA+AGG + chr5.2:60382406-60382425 MS.gene50186:CDS 50.0%
!! TTTTAAGGACGGAAGTGCGG+AGG - chr5.2:60384528-60384547 None:intergenic 50.0%
AATCACCACCGGTGCAGTTG+AGG - chr5.2:60384212-60384231 None:intergenic 55.0%
AGTTTGAGCTTGCGGCACGA+AGG - chr5.2:60386334-60386353 None:intergenic 55.0%
CAAAACCTCAACTGCACCGG+TGG + chr5.2:60384204-60384223 MS.gene50186:CDS 55.0%
CAGCTGCACCCGATTCTGTT+TGG + chr5.2:60385220-60385239 MS.gene50186:intron 55.0%
CAGCTGCATGAGCAAGGAGT+AGG - chr5.2:60384266-60384285 None:intergenic 55.0%
CCACCTGTGCAGTAAGTGGA+TGG - chr5.2:60384141-60384160 None:intergenic 55.0%
CCATCCACTTACTGCACAGG+TGG + chr5.2:60384138-60384157 MS.gene50186:CDS 55.0%
GAAAGGTCTTACGACGCGCT+TGG - chr5.2:60384889-60384908 None:intergenic 55.0%
GAACAGCAGCTGCATGAGCA+AGG - chr5.2:60384272-60384291 None:intergenic 55.0%
GAGCCATCCACTTACTGCAC+AGG + chr5.2:60384135-60384154 MS.gene50186:CDS 55.0%
GCTGCAAAGGAAGGTGGCAA+AGG + chr5.2:60382415-60382434 MS.gene50186:CDS 55.0%
GGCAGAATCAGCTCCTACCA+GGG - chr5.2:60384678-60384697 None:intergenic 55.0%
GTACGTACCTGTGGACCGAT+GGG - chr5.2:60387505-60387524 None:intergenic 55.0%
GTGTAGAAGCCACACACCCT+TGG - chr5.2:60385620-60385639 None:intergenic 55.0%
TGTACGTACCTGTGGACCGA+TGG - chr5.2:60387506-60387525 None:intergenic 55.0%
TTTGGCGTTTGCGCAGTGAC+GGG - chr5.2:60385281-60385300 None:intergenic 55.0%
! AACTGCACCGGTGGTGATTC+GGG + chr5.2:60384213-60384232 MS.gene50186:CDS 55.0%
! CAACTGCACCGGTGGTGATT+CGG + chr5.2:60384212-60384231 MS.gene50186:CDS 55.0%
! GAGCGTAACGGGATACCCAT+CGG + chr5.2:60387487-60387506 MS.gene50186:CDS 55.0%
!! GAAGGTGCTGCAAAGGAAGG+TGG + chr5.2:60382409-60382428 MS.gene50186:CDS 55.0%
CAGAATCGGGTGCAGCTGAG+AGG - chr5.2:60385218-60385237 None:intergenic 60.0%
CGGCACGAAGGAGGGAGAAA+CGG - chr5.2:60386322-60386341 None:intergenic 60.0%
CTCTGTCCCCGAATCACCAC+CGG - chr5.2:60384223-60384242 None:intergenic 60.0%
GGGCAGAATCAGCTCCTACC+AGG - chr5.2:60384679-60384698 None:intergenic 60.0%
TGAGCTTGCGGCACGAAGGA+GGG - chr5.2:60386330-60386349 None:intergenic 60.0%
TTGAGCTTGCGGCACGAAGG+AGG - chr5.2:60386331-60386350 None:intergenic 60.0%
! ACTGCACCGGTGGTGATTCG+GGG + chr5.2:60384214-60384233 MS.gene50186:CDS 60.0%
! GGGGTGAAGGGTACACAGTG+AGG + chr5.2:60388077-60388096 MS.gene50186:CDS 60.0%
CGGGATACCCATCGGTCCAC+AGG + chr5.2:60387495-60387514 MS.gene50186:CDS 65.0%
! GGCGTTTGCGCAGTGACGGG+TGG - chr5.2:60385278-60385297 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 60382406 60388164 60382406 ID=MS.gene50186
chr5.2 mRNA 60382406 60388164 60382406 ID=MS.gene50186.t1;Parent=MS.gene50186
chr5.2 exon 60382406 60382475 60382406 ID=MS.gene50186.t1.exon1;Parent=MS.gene50186.t1
chr5.2 CDS 60382406 60382475 60382406 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60383163 60383221 60383163 ID=MS.gene50186.t1.exon2;Parent=MS.gene50186.t1
chr5.2 CDS 60383163 60383221 60383163 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60383392 60383467 60383392 ID=MS.gene50186.t1.exon3;Parent=MS.gene50186.t1
chr5.2 CDS 60383392 60383467 60383392 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60383583 60383660 60383583 ID=MS.gene50186.t1.exon4;Parent=MS.gene50186.t1
chr5.2 CDS 60383583 60383660 60383583 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60383744 60383831 60383744 ID=MS.gene50186.t1.exon5;Parent=MS.gene50186.t1
chr5.2 CDS 60383744 60383831 60383744 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60384059 60384314 60384059 ID=MS.gene50186.t1.exon6;Parent=MS.gene50186.t1
chr5.2 CDS 60384059 60384314 60384059 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60386672 60386814 60386672 ID=MS.gene50186.t1.exon7;Parent=MS.gene50186.t1
chr5.2 CDS 60386672 60386814 60386672 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60387163 60387380 60387163 ID=MS.gene50186.t1.exon8;Parent=MS.gene50186.t1
chr5.2 CDS 60387163 60387380 60387163 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60387485 60387516 60387485 ID=MS.gene50186.t1.exon9;Parent=MS.gene50186.t1
chr5.2 CDS 60387485 60387516 60387485 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60387605 60387707 60387605 ID=MS.gene50186.t1.exon10;Parent=MS.gene50186.t1
chr5.2 CDS 60387605 60387707 60387605 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60387814 60387922 60387814 ID=MS.gene50186.t1.exon11;Parent=MS.gene50186.t1
chr5.2 CDS 60387814 60387922 60387814 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
chr5.2 exon 60388021 60388164 60388021 ID=MS.gene50186.t1.exon12;Parent=MS.gene50186.t1
chr5.2 CDS 60388021 60388164 60388021 ID=cds.MS.gene50186.t1;Parent=MS.gene50186.t1
Gene Sequence

>MS.gene50186

TACGAAGGTGCTGCAAAGGAAGGTGGCAAAGGAACAAGTATATGGGATACCTTTACTCACAAATATCCAGGTATCTCTATCTATCTATTTACCTTTAGAAAGCTTTTAAATTAATTATTTATTAAAATCTAGTTAATTTTTTATGAAATTAATTAAGCTTCATACAAAAGAAAAAACTATCTCCCATATGAATAATATAAATAATAATAATAGATATTTATACGTAGACTAAAGAAACCCGAAATTACAATAATTAAAACATAATTTATTCTGAAATATATATATATATATATATATATATATATATATATATATTATATAATGTTTAATTTATTTCTTTCATAAAACAAAAAAGTTTTCCTTCAAAAAAAAAATAAAACAAAAAAGTTTATAGATGTTTTGGTTCCTTCAAACTAGAATTAAACCTTAATTCAAAATAAATAATGTGTTAATTATTTTTTTTAGGGTAAATAATGTGTTAATTATTGTAATTTAGAGTTTCTTAAGAGTAAATATATTACAAGTACGTAAACGTAAAAAAATACATTATAAACTTTTTTGATCTTGTACTAGAATAAACTTGTATTCCCTCAAACTTTTGTTGGGGTAATTTATTTCTTAAGATCAAATAAACTAGTATATATTTAAGAGTGTAATTATATCCTTCAAAATACATATACTATAAGGATTAAAACAAAACAACTAGAATGTATGTAAATGCATAACTTACATTTAATCAATGGTGATCGATATACAGAAAAAATAATCGACAGAAGCAATGGAGATGTCTCTATTGACGGGTATCATCGGTACAAGGTATGATTCACATGTATCATTAGCAAAGTGGTTAAACTTAAACTTTCACTTAATGCAAAAATGTCTCAAACAAATTTTACTTTAGGTTTCACTCAATGGATTTTCTACTAAAATTCTTTAATATATCGATGTATTTTATTTTTATGTTATAGAAAATTTGTTTTATACAGGAAGATGTTGGGATCATGAAGTATATGAATTTAGATGCATACAGATTATCCATCTCATGGTCTAGAATACTACCAAGTAAGTTGATAATTTCCTATCCTTAAACAATGCAGTTATCAAGTAAATTATTGCAGTCTTAGTAAACTACATCCACATTTAATCAAAAAAAATTAAAATAAAACTATATTCACAGATGGAAGGATAAGTGAAGGCATTAATCAAGAAGGGCTCACATTCTACAACAACTTCATCAACGAGCTAATAGCTAATGGTCAGAAATATTAAAATATGCATTTTATAATTTCTTAAGCATAGTACATTGCAATCATAATTGAAAAATTATTAGTTTTGCAGGTATAGAAGTCTTTGTGACACTATTTCATTGGGATCTACCACAAGCCTTGGAAGATGAGTATGGAGGTTTCTTAAGTCCTCGCATAGTGTAAGCGACGATGTACTAACATTAAAACTATAATTTATTTAGAATTATATGAGTAAATTAAATTTTCTTCTAAGTTGAAGAATGCTTTAGATGTGAAACTAGTATATCATTTTGTGCATGGAGCAGTAAGAAGAGTGTATAGCAGTGTAGCTAGGTTTCATTCTAAATTTTACGCCACAATGGCGCTACAAAAAAATTGATAATACTTTTCTGTTTTGAACTTTTAGAAATGATTTTCGGGATTATGCGGAGCTTTGCTTCAAGGAATTTGGAGATAGAGTGAAGTACTGGATTACTATAAATGAGCCATCCACTTACTGCACAGGTGGATATGTTAATGCGATATTTCCACCTGGTAGATGTTCTGATTGGCAAAACCTCAACTGCACCGGTGGTGATTCGGGGACAGAGCCATATTTAGTTGCACATCACCTACTCCTTGCTCATGCAGCTGCTGTTCAAGTTTACAAGACAAAATATCAGGTTCATTTTAACTCTTAGTGATGATAACATTGAAGCTCTAAAATGTACCAAACTTATGTATATAGACACAAGTAATTAAAATTTGCATATGATATTAAAATAATTTCAATATCAGTTTAAAAATTGTAGGTAAGGTCGAATCGTTCAAGTAATACTTGTGCTGCCAAGTGCCAAGTGCCAACCATTTGTTTATAAACTGTGACATAATTTCCTCCGCACTTCCGTCCTTAAAAGTCTGTACCCTCGGACAATTGGACTCATAATTGAGTTTCTATTTCCATTCCACATCTCTCGCAGACTTCTTTGACATATCTGCTAAGGCTGATATATATTCCTACTGCATTCTATACAATCTCAACACCCTGGTAGGAGCTGATTCTGCCCAAGTCCGTCATGTCAAAGTCTCTTTCTGTAGTTTTTTTGAATTTTTTGAACATGTCTTTTATTGTTTCCTGCGAATATCAAGTCATCTACATGTTCTGCCCAACTCACAATTACTAAACTCTTCCTTTCATCAGTCTTGACAAGCAGTTTCCTCTAGATTTTGAAAGCAGGACATAATCCTTTTGTACCAAGCGCGTCGTAAGACCTTTCTTAGCTTGTAGACCTTATCTTCTTCTCCATGCCTTTTATATCCTTGTGGCTGCTCAACAAAGTCAGTTTCCACCACATCACGATGTTAAAAAGCACTTTCGCATCTAGTTGATAAACGCACCATCATTTGAAATTTGTAAGACCATGTGTATCTCATCTAGCAGCAGGGAAAAACATTTGACTGTAATCAACACCAAGTTGCTGGGAGTATCCCTTTGCTGATAGACGAGCCTTGTATTTTTCTACTTCTGCTCTCTAGTTGAACTTAGCCTTAAAGACTCACTTGATTCCAATTTTCCTTTGATTCCTCTCAGCTGCACCCGATTCTGTTTGGGAGTATATGCTGCATCAGATGAGGTGAATTTTCCACCCGTCACTGCGCAAACGCCAAATAAAACCCTTTCAAAGGTATATACCCTTTTCAAATAAAAAGTAAACCTACATTTTTCTACTACAGTCATCAATAAAAGTTATGAAATACATCTTGTTCCCATTGTATTCAAGCATGATTGGTCCACATATGTTAGCGTGGATCAACTTCAGAACTTGAGATGTTCTCCATGAAGCCTTCCTTGGAAAGGATTCTATGTGTTTCTATCTTGCAATCACTGCACACCTTTGATGCATCATCCAGCTTTGACAAACCCCATACTATAACCTTCTAAGCCTACTTATCCTCTTAAGGCTGATATGATCATATATGCAATGCCAAGGGTGTGTGGCTTCTACACACATTGCTACAAAACAGGTGGAAGATATGACTGAGATCTTAAACATTAGACTGGATGACATCTGAGATTGAATTATCAATCCCCTTTTTGGATGGGAAACTTTACACTGGTCCGGTTGAAAGACAACAGTCAGGTTCTTCTCTTGCAACTGGCCGATACTAAGAAGATTGTTCTTTAGATCAGGAATATAGTATACATCAGATACCCCTTGAATAACGCTGCCTACACATATCTTCATATTCCCTTTCCCTTAACCATCATCCTAGAATGATCTCTGAGTTTTACCGACACTCTGAACATTTCACTAAGACTGTGAAACTAATTCTTATTGCCATATATATGGTAGATGCGGCATGAATCAAAAGGCCATACCTTTTCCAAAGTGTCCTTCATTTCAATATGAACCACAAACAACATTTCTTCCTCTTCGTCAAACTCTGCATAGTTTGCTTTCTCATCCCAAGTAGGAAACTCATACTGAAAATGCCCTAACATGTGACACTTTTAGCATTCAACGAACCATATCCTTTGTCCTATACTGAAAATGGAGCAGACAACAAGTCAAATCTTGCAGTTATGGGTCTGAGGATCTTGTCAACAACTGTCATTTGTTCTACCCTCTCTGCATGTATTTTCATCTTATTGACAATGTCGAGAGTTCTTGCAATGTATACATCAACCGTTTCTCCCTCCTTCGTGCCGCAAGCTCAAACTCCATTTAAAGGGCTTGTAGCTGCGCTTGTTTCACCTTGGTAGATCCTTGATACTTCTGCCTCATTGAATCCACATATCCTTTGTCGTGTCTTTATCAAGAATGGTCTCCATTCTTGATACTTCTAATTAGCACCTTCATCCGAAAAAAGAGGGTTAAGATGAAAAGGTTTTTTGTAAAATAAAAAAAACAAAGATGCAAAAAGTCTTGTATCATGATCATCTTATATCTAAGCATTGTATTAGTTGTGTCTATAGACAAGTGCACATAAAAGTTTTATGTACTTGAATACTAATTTGTGAGAGTCTAAATTACTGCAGGTGCCATTGTTGCTTAAAAGCCAAACTACATCTCAAAAGGGTTGGATAGGAATAGCGTTACAATCTTACTGGTTTGTGCCATTTTCAAATAGCAAATCCGATGAAAGAGCTGCAGAACGAGCAATTGACTTCATGCTTGGATGGTTAGTAGCTCATTGCACACTCGCCCTATATATGAAATTATGAACTTAACATGACTTGATTATATAAAAAAGAAAAAACAAATGGAGCATGATTTACTAATGAATGTTCATTTTTTGTTCATCTCTCAAATTATGAATCATTGTTAATGGTGGTGCAGGTTAAATAAAGCCTTTTTCCCTCTATTTCTTCCATTGATTTTATTTTGATCTACATTGTTGAAGTATATCATTTATTTTTTACACACTATATGCATGATCATGAATCAATGATAAAAATACGTGTGTGTGCGCGCACGCGCATAGCACCATAAGAGAGCTGAAAAATTTCAATTGAAATCTCAATTGCAGGTTTATGACACCATTGACAACGGGAGACTATCCACAGCATATGCGATCCTTGGTTGGACAACGATTGCCAAATTTCTATGAAGAACAAACCAGGCTACTCAACGGTTCTTTTGATTTTATCGGATTAAACTACTACACATCTAGATATGCAGCCAATGCACCTAATTTAAACACTACTATACCTTGCTATCTCACAGATTCCCTTGCCAATCTTACAAGTAAACACGCCTTTATTCATCACTTATATCATAATTAATTTTAACTAATAATTTAAATCTATGTTGAATTTGACGATAAGCTCTCTTATTTTTTGTGATGGAAGCTGAGCGTAACGGGATACCCATCGGTCCACAGGTACGTACAAGTGTGACCACGTCAAATGAAGTTTTATCTTTCTGGTAAAATAAAAATATGAAACCTCCATGATTGTATATATCTGCAGGCTGCTTCAGATTGGTTTTATAGTTATCCAATTGGATTTATGAAACTGTTGGTCTACATCAAGGAAAAGTACAACAATCCAGTGATTTATGTTACCGAAAATGGTAAATTACAACAATCGTCGATAAATATTGCAACGTAAATATATGAATGAACATGAATATGTGAACTTGTTTTGGTACATCACACATGAATGAACTTGATTTGCAGGTATAGATGAGAAAAATGATCCAACACTGCCATTGGATGAAGCACTTAAGGACATTGACAGGATTAATTATTATCATGACCATCTCTCATATCTTCAATCAGCAATTAGGTAATGGTTGCTTTTATGTCTAAAAATCCTGTGTCTATTTGCTTCAATACACATCTTAATACTTTCTATTTTATTTTGGTTTTTGTGAATATACAAAGGATCGGCGTAAATGTAAAAGGATATTTTGCATGGTCGCTGTTGGACAATTTTGAATGGGGTGAAGGGTACACAGTGAGGTTTGGAATGAACTTTGTAGATTACAAAAATAACTTGAAAAGATATCAAAAGCTCTCAGCACAATG
Protein sequence

>MS.gene50186.t1

YEGAAKEGGKGTSIWDTFTHKYPEKIIDRSNGDVSIDGYHRYKEDVGIMKYMNLDAYRLSISWSRILPNGRISEGINQEGLTFYNNFINELIANGIEVFVTLFHWDLPQALEDEYGGFLSPRIVNDFRDYAELCFKEFGDRVKYWITINEPSTYCTGGYVNAIFPPGRCSDWQNLNCTGGDSGTEPYLVAHHLLLAHAAAVQVYKTKYQVPLLLKSQTTSQKGWIGIALQSYWFVPFSNSKSDERAAERAIDFMLGWFMTPLTTGDYPQHMRSLVGQRLPNFYEEQTRLLNGSFDFIGLNYYTSRYAANAPNLNTTIPCYLTDSLANLTTERNGIPIGPQAASDWFYSYPIGFMKLLVYIKEKYNNPVIYVTENGIDEKNDPTLPLDEALKDIDRINYYHDHLSYLQSAIRIGVNVKGYFAWSLLDNFEWGEGYTVRFGMNFVDYKNNLKRYQKLSAQ