Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52682.t1 | XP_003625292.1 | 98.3 | 841 | 14 | 0 | 1 | 841 | 1 | 841 | 0.00E+00 | 1620.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52682.t1 | Q9FG37 | 70.0 | 848 | 232 | 7 | 3 | 841 | 2 | 836 | 0.0e+00 | 1154.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52682.t1 | G7KWA0 | 98.3 | 841 | 14 | 0 | 1 | 841 | 1 | 841 | 0.0e+00 | 1620.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene52682 | MS.gene042871 | PPI |
| MS.gene52682 | MS.gene066960 | PPI |
| MS.gene52682 | MS.gene007196 | PPI |
| MS.gene52682 | MS.gene058069 | PPI |
| MS.gene52682 | MS.gene40494 | PPI |
| MS.gene52682 | MS.gene49838 | PPI |
| MS.gene52682 | MS.gene21793 | PPI |
| MS.gene52682 | MS.gene55120 | PPI |
| MS.gene07741 | MS.gene52682 | PPI |
| MS.gene024821 | MS.gene52682 | PPI |
| MS.gene52682 | MS.gene24697 | PPI |
| MS.gene52682 | MS.gene55626 | PPI |
| MS.gene52682 | MS.gene82109 | PPI |
| MS.gene52682 | MS.gene050299 | PPI |
| MS.gene52682 | MS.gene79799 | PPI |
| MS.gene52682 | MS.gene037044 | PPI |
| MS.gene52682 | MS.gene47284 | PPI |
| MS.gene52682 | MS.gene87898 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52682.t1 | MTR_7g093560 | 98.335 | 841 | 14 | 0 | 1 | 841 | 1 | 841 | 0.0 | 1710 |
| MS.gene52682.t1 | MTR_8g011450 | 26.667 | 570 | 322 | 21 | 181 | 700 | 20 | 543 | 1.03e-41 | 163 |
| MS.gene52682.t1 | MTR_1g088410 | 22.500 | 480 | 267 | 10 | 331 | 708 | 160 | 636 | 2.38e-24 | 109 |
| MS.gene52682.t1 | MTR_5g004880 | 26.119 | 268 | 177 | 7 | 477 | 731 | 851 | 1110 | 1.74e-16 | 85.1 |
| MS.gene52682.t1 | MTR_5g004880 | 26.022 | 269 | 177 | 8 | 477 | 731 | 851 | 1111 | 2.13e-16 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52682.t1 | AT5G06680 | 70.165 | 848 | 231 | 7 | 3 | 841 | 2 | 836 | 0.0 | 1210 |
| MS.gene52682.t1 | AT5G17410 | 26.353 | 573 | 333 | 22 | 178 | 708 | 59 | 584 | 2.96e-34 | 140 |
| MS.gene52682.t1 | AT5G17410 | 26.353 | 573 | 333 | 22 | 178 | 708 | 60 | 585 | 3.09e-34 | 140 |
| MS.gene52682.t1 | AT3G53760 | 23.124 | 493 | 282 | 13 | 331 | 729 | 176 | 665 | 6.60e-24 | 108 |
| MS.gene52682.t1 | AT3G53760 | 23.124 | 493 | 282 | 13 | 331 | 729 | 176 | 665 | 6.81e-24 | 108 |
| MS.gene52682.t1 | AT3G53760 | 28.221 | 163 | 112 | 3 | 570 | 729 | 477 | 637 | 9.34e-15 | 79.0 |
| MS.gene52682.t1 | AT3G43610 | 24.911 | 281 | 178 | 8 | 477 | 731 | 850 | 1123 | 3.24e-14 | 77.8 |
| MS.gene52682.t1 | AT3G43610 | 24.911 | 281 | 178 | 8 | 477 | 731 | 813 | 1086 | 3.32e-14 | 77.8 |
| MS.gene52682.t1 | AT3G43610 | 24.823 | 282 | 178 | 9 | 477 | 731 | 850 | 1124 | 2.30e-13 | 74.7 |
Find 200 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTATGGGTTGGGAATTT+TGG | 0.031923 | 7.2:-15867718 | None:intergenic |
| TTGAGGGGAGTTAGGGTTTA+TGG | 0.083486 | 7.2:-15867732 | None:intergenic |
| ATTCTCCGAAATCGTTAAAT+TGG | 0.126045 | 7.2:-15868029 | None:intergenic |
| GTTTATAAGCTTTGTGAATT+AGG | 0.158306 | 7.2:+15868316 | MS.gene52682:CDS |
| TGGATTCAATTAGGGTTTCT+AGG | 0.220908 | 7.2:+15868278 | MS.gene52682:CDS |
| GCAAACACGGAGAAAATTTA+TGG | 0.243617 | 7.2:-15868920 | None:intergenic |
| TGAGGCGCTGCCAAGTTCTC+TGG | 0.243784 | 7.2:+15869571 | MS.gene52682:CDS |
| AGCATGTTGCAATCTATTAA+AGG | 0.251716 | 7.2:-15869523 | None:intergenic |
| TTTATAAGCTTTGTGAATTA+GGG | 0.258383 | 7.2:+15868317 | MS.gene52682:CDS |
| GAGCGTAACGGAGGGAGTTT+TGG | 0.267332 | 7.2:-15867757 | None:intergenic |
| TCTTCCCAATTTAACGATTT+CGG | 0.269334 | 7.2:+15868024 | MS.gene52682:CDS |
| AGTGGCTTTGGTGGAGAATT+TGG | 0.269782 | 7.2:-15867909 | None:intergenic |
| TCGGCGACGGCGGCGGAGTC+GGG | 0.277688 | 7.2:-15867818 | None:intergenic |
| TGAGGGGAGTTAGGGTTTAT+GGG | 0.283183 | 7.2:-15867731 | None:intergenic |
| CTGAGCCTATCCAATATATC+AGG | 0.283268 | 7.2:-15869288 | None:intergenic |
| ATAAGCTCTTTCAAACTTGC+AGG | 0.292246 | 7.2:+15869219 | MS.gene52682:CDS |
| TTATATAATGTTTGAAGTCT+TGG | 0.292447 | 7.2:+15869629 | MS.gene52682:CDS |
| ATGGCAAGACGCGGTGGTTT+TGG | 0.294822 | 7.2:+15868991 | MS.gene52682:CDS |
| GTATGATGACCCTGATATAT+TGG | 0.300274 | 7.2:+15869278 | MS.gene52682:CDS |
| CTGTCTGAGGGTGTGAGTTC+GGG | 0.300602 | 7.2:+15868511 | MS.gene52682:CDS |
| TTTCAAACTTGCAGGTTTGC+TGG | 0.301868 | 7.2:+15869227 | MS.gene52682:CDS |
| AGTTATGCAGTTTGGTTTCA+TGG | 0.303491 | 7.2:-15869493 | None:intergenic |
| GTTTGGTTTCATGGTCTTCC+AGG | 0.315966 | 7.2:-15869484 | None:intergenic |
| TTCTAGGGCTAGTAGTAGTA+TGG | 0.316780 | 7.2:+15868294 | MS.gene52682:CDS |
| AATGGTGAAGAGGTGGGTTT+TGG | 0.332311 | 7.2:+15868741 | MS.gene52682:CDS |
| CGGCGACGGCGGCGGAGTCG+GGG | 0.337631 | 7.2:-15867817 | None:intergenic |
| CAAAGACGCGGTGAAAATAA+TGG | 0.338003 | 7.2:+15868058 | MS.gene52682:CDS |
| TGGGTTTATTGAGATGAGTT+TGG | 0.343645 | 7.2:+15868360 | MS.gene52682:CDS |
| AACTGATACCCTTGAGTCAT+TGG | 0.348158 | 7.2:+15869023 | MS.gene52682:CDS |
| TTTAAGAGGTGGGGCGATGG+CGG | 0.348905 | 7.2:+15868627 | MS.gene52682:CDS |
| ATCGGCGACGGCGGCGGAGT+CGG | 0.351723 | 7.2:-15867819 | None:intergenic |
| GCTATTTCCCGTCGATTCTT+CGG | 0.354074 | 7.2:-15868115 | None:intergenic |
| AAAGAGCTTATTGTGTTTGC+GGG | 0.370957 | 7.2:-15869207 | None:intergenic |
| TATTGTTTAAGAGGGTTGTT+GGG | 0.372072 | 7.2:+15868341 | MS.gene52682:CDS |
| GATGAGGTTGATGGCAGATT+TGG | 0.372904 | 7.2:+15868588 | MS.gene52682:CDS |
| GGAGTTAGGGTTTATGGGTT+GGG | 0.375325 | 7.2:-15867726 | None:intergenic |
| GAGAGAGGAGGTGGTGGACT+AGG | 0.375344 | 7.2:-15867685 | None:intergenic |
| CGTTGAGGAGATTAGCGGTT+TGG | 0.375829 | 7.2:+15868545 | MS.gene52682:CDS |
| AATTAGGGGTATTGTTTAAG+AGG | 0.376828 | 7.2:+15868332 | MS.gene52682:CDS |
| ATTATCGATATGAGTGGCTT+TGG | 0.379589 | 7.2:-15867921 | None:intergenic |
| AGATCTGGATGCAATATCTA+AGG | 0.386160 | 7.2:+15870111 | MS.gene52682:CDS |
| GTTTGCTGGAAACTGCAATT+CGG | 0.391778 | 7.2:+15869241 | MS.gene52682:CDS |
| GGGTTTATTGAGATGAGTTT+GGG | 0.393560 | 7.2:+15868361 | MS.gene52682:CDS |
| GCTGTCTGAGGGTGTGAGTT+CGG | 0.398690 | 7.2:+15868510 | MS.gene52682:CDS |
| TACTATTAGTGACTTGTAAA+GGG | 0.399617 | 7.2:-15869778 | None:intergenic |
| AGAGTGGAACATGCACTTAT+TGG | 0.400373 | 7.2:+15869459 | MS.gene52682:CDS |
| CGCTTTGGAGAGAGGGATAT+AGG | 0.401266 | 7.2:+15868827 | MS.gene52682:CDS |
| TTTGCTGGAAACTGCAATTC+GGG | 0.401931 | 7.2:+15869242 | MS.gene52682:CDS |
| TTCTCCGAAATCGTTAAATT+GGG | 0.417131 | 7.2:-15868028 | None:intergenic |
| TTTGGAATTGAGGGGAGTTA+GGG | 0.426525 | 7.2:-15867739 | None:intergenic |
| GTATTGTTTAAGAGGGTTGT+TGG | 0.427342 | 7.2:+15868340 | MS.gene52682:CDS |
| GTATTAGAAGTTATGCAGTT+TGG | 0.427529 | 7.2:-15869501 | None:intergenic |
| GTCAGCGAAGGAGAGGGCTT+CGG | 0.432734 | 7.2:-15867879 | None:intergenic |
| TTAAGAGGTGGGGCGATGGC+GGG | 0.433851 | 7.2:+15868628 | MS.gene52682:CDS |
| TTACTATTAGTGACTTGTAA+AGG | 0.435584 | 7.2:-15869779 | None:intergenic |
| GGTGGCGAGACGGCGTTTGA+TGG | 0.437023 | 7.2:-15867843 | None:intergenic |
| ATTAAGCGGTATTTGTTGCT+TGG | 0.439442 | 7.2:+15869129 | MS.gene52682:CDS |
| ATGAAAGCGGTGATAGGGGC+TGG | 0.445222 | 7.2:+15869328 | MS.gene52682:CDS |
| GGATTCAATTAGGGTTTCTA+GGG | 0.447671 | 7.2:+15868279 | MS.gene52682:CDS |
| TGCCACATGAAAGCGGTGAT+AGG | 0.449321 | 7.2:+15869322 | MS.gene52682:CDS |
| CTGATATATTGGATAGGCTC+AGG | 0.451238 | 7.2:+15869289 | MS.gene52682:CDS |
| GGATGTTGGGACGGTTGGGC+AGG | 0.452257 | 7.2:+15868399 | MS.gene52682:CDS |
| TAGAGGATGTTGGGACGGTT+GGG | 0.453017 | 7.2:+15868395 | MS.gene52682:CDS |
| TTTGCGGGCACAGAAAGTTC+AGG | 0.456716 | 7.2:-15869192 | None:intergenic |
| TAATTTCAACCCAGAGAACT+TGG | 0.458624 | 7.2:-15869581 | None:intergenic |
| GGGAGTTAGGGTTTATGGGT+TGG | 0.459109 | 7.2:-15867727 | None:intergenic |
| GATGGAATCGGCGACGGCGG+CGG | 0.459167 | 7.2:-15867825 | None:intergenic |
| AATATCTAATGGATATTGTT+GGG | 0.459669 | 7.2:+15869169 | MS.gene52682:CDS |
| GTAGAGGATGTTGGGACGGT+TGG | 0.462584 | 7.2:+15868394 | MS.gene52682:CDS |
| GCCACATGAAAGCGGTGATA+GGG | 0.462826 | 7.2:+15869323 | MS.gene52682:CDS |
| CGGTATTTGTTGCTTGGCCA+AGG | 0.464399 | 7.2:+15869135 | MS.gene52682:CDS |
| CAGATTTGGTTGAGAAGTGT+AGG | 0.464625 | 7.2:+15868602 | MS.gene52682:CDS |
| TGGTGGAGAATTTGGTGTAA+AGG | 0.473754 | 7.2:-15867901 | None:intergenic |
| TCCGATTCCGTTGCTGTCTG+AGG | 0.477670 | 7.2:+15868498 | MS.gene52682:CDS |
| GAAAGAGCTTATTGTGTTTG+CGG | 0.479203 | 7.2:-15869208 | None:intergenic |
| TTGAAGTCTTGGAAATATCA+TGG | 0.481821 | 7.2:+15869640 | MS.gene52682:CDS |
| GAGGCGCTGCCAAGTTCTCT+GGG | 0.486256 | 7.2:+15869572 | MS.gene52682:CDS |
| CTGTGAAAGCTGAATCGCTT+TGG | 0.486329 | 7.2:+15868812 | MS.gene52682:CDS |
| AACCGTCCCAACATCCTCTA+CGG | 0.488437 | 7.2:-15868392 | None:intergenic |
| GGTCTCCCGTAGAGGATGTT+GGG | 0.490035 | 7.2:+15868386 | MS.gene52682:CDS |
| CCCTCAGACAGCAACGGAAT+CGG | 0.494521 | 7.2:-15868499 | None:intergenic |
| AGATCAACATGCTGCTGCAC+AGG | 0.498245 | 7.2:-15870172 | None:intergenic |
| TTGCTGTGAGGACCGTGGTT+GGG | 0.500638 | 7.2:+15868939 | MS.gene52682:CDS |
| GGCGACGGCGGCGGAGTCGG+GGG | 0.503666 | 7.2:-15867816 | None:intergenic |
| AAGAATTGATAGGCATCTGT+TGG | 0.504075 | 7.2:+15869062 | MS.gene52682:CDS |
| TTATTGAGATGAGTTTGGGT+AGG | 0.504499 | 7.2:+15868365 | MS.gene52682:CDS |
| GAGTGATTATTATAAGTTGT+TGG | 0.505355 | 7.2:+15868450 | MS.gene52682:CDS |
| TGATATTGAAGAGATGAAGT+AGG | 0.510039 | 7.2:-15867952 | None:intergenic |
| ATCGATATGAGTGGCTTTGG+TGG | 0.511381 | 7.2:-15867918 | None:intergenic |
| AGTCATCGGAAGAAGAATCC+TGG | 0.512777 | 7.2:+15870026 | MS.gene52682:CDS |
| GAAGAATCCTGGATTGCTGA+TGG | 0.517806 | 7.2:+15870037 | MS.gene52682:CDS |
| TTTGCTGTGAGGACCGTGGT+TGG | 0.518184 | 7.2:+15868938 | MS.gene52682:CDS |
| AGAGAGGAGGTGGTGGACTA+GGG | 0.521000 | 7.2:-15867684 | None:intergenic |
| TGCAGCTAGTTTCAGCATTG+AGG | 0.525852 | 7.2:+15869553 | MS.gene52682:CDS |
| GAAAATAATGGATTTAATGA+TGG | 0.529424 | 7.2:+15868070 | MS.gene52682:CDS |
| ATTAGGGGTATTGTTTAAGA+GGG | 0.529812 | 7.2:+15868333 | MS.gene52682:CDS |
| CGTGCCGCGACTGAAGATAC+AGG | 0.531866 | 7.2:+15868964 | MS.gene52682:CDS |
| CAATATCTAATGGATATTGT+TGG | 0.533980 | 7.2:+15869168 | MS.gene52682:CDS |
| TGAAAGCGGTGATAGGGGCT+GGG | 0.537532 | 7.2:+15869329 | MS.gene52682:CDS |
| TGTAAAGGTCAGCGAAGGAG+AGG | 0.539562 | 7.2:-15867886 | None:intergenic |
| AACATGCACTTATTGGTGCC+TGG | 0.540811 | 7.2:+15869466 | MS.gene52682:CDS |
| CAAAGCGATTCAGCTTTCAC+AGG | 0.540978 | 7.2:-15868811 | None:intergenic |
| GGGCTGGGATGTATTCTCAC+TGG | 0.541307 | 7.2:+15869344 | MS.gene52682:CDS |
| GAGACGGCGTTTGATGGAAT+CGG | 0.541621 | 7.2:-15867837 | None:intergenic |
| AGGTCTCCCGTAGAGGATGT+TGG | 0.541794 | 7.2:+15868385 | MS.gene52682:CDS |
| CGGGGAATTATTTATCGTTG+AGG | 0.543145 | 7.2:+15868530 | MS.gene52682:CDS |
| ATTGTAGAGAAATCTCTCCT+TGG | 0.543350 | 7.2:+15869741 | MS.gene52682:CDS |
| AGATTTGGTTGAGAAGTGTA+GGG | 0.543651 | 7.2:+15868603 | MS.gene52682:CDS |
| GCTGAATCGCTTTGGAGAGA+GGG | 0.544757 | 7.2:+15868820 | MS.gene52682:CDS |
| AGCTGAATCGCTTTGGAGAG+AGG | 0.546870 | 7.2:+15868819 | MS.gene52682:CDS |
| TATGCTTGTCAAGGTGTGGA+TGG | 0.547211 | 7.2:+15868211 | MS.gene52682:CDS |
| TCTATGGAAGCTTAAGAGAG+TGG | 0.549168 | 7.2:+15869443 | MS.gene52682:CDS |
| GATATTGAAGAGATGAAGTA+GGG | 0.550167 | 7.2:-15867951 | None:intergenic |
| TTCATAAACTCATGAACCAT+CGG | 0.551343 | 7.2:-15868682 | None:intergenic |
| AGAGAATGCGGTGAGCGTAA+CGG | 0.552079 | 7.2:-15867769 | None:intergenic |
| TTCATTTACATGCTAGACAT+GGG | 0.552742 | 7.2:+15868656 | MS.gene52682:CDS |
| CCGATTCCGTTGCTGTCTGA+GGG | 0.554083 | 7.2:+15868499 | MS.gene52682:CDS |
| CCACTCATATCGATAATAAG+TGG | 0.554560 | 7.2:+15867927 | MS.gene52682:CDS |
| ATCAACCTCATCTTCACCAT+CGG | 0.554617 | 7.2:-15868577 | None:intergenic |
| TAAGTTGTTGGCTGTGCTTG+AGG | 0.555869 | 7.2:+15868462 | MS.gene52682:CDS |
| AGAGAAGCTGAAATAAAAGA+AGG | 0.556188 | 7.2:-15868868 | None:intergenic |
| AAGTGAGATGGAAGTAGCCA+AGG | 0.558851 | 7.2:+15869674 | MS.gene52682:CDS |
| ACCGTCCCAACATCCTCTAC+GGG | 0.558936 | 7.2:-15868391 | None:intergenic |
| CACGGTCCTCACAGCAAACA+CGG | 0.559449 | 7.2:-15868933 | None:intergenic |
| GGAAGGGTCATTCGACTTAG+CGG | 0.560699 | 7.2:-15867996 | None:intergenic |
| AGCATTGTCTTGCGATTAAG+CGG | 0.560849 | 7.2:+15869115 | MS.gene52682:CDS |
| TGCTAGACATGGGGATCCGA+TGG | 0.562527 | 7.2:+15868666 | MS.gene52682:CDS |
| CGTTAAATTGGGAAGAAGAA+CGG | 0.564292 | 7.2:-15868017 | None:intergenic |
| AAGTAGATCATCAAGATCCT+TGG | 0.565007 | 7.2:-15869691 | None:intergenic |
| GGCTTCGGAGGAACGACCAT+CGG | 0.566124 | 7.2:-15867864 | None:intergenic |
| TTTATCGTTGAGGAGATTAG+CGG | 0.569383 | 7.2:+15868540 | MS.gene52682:CDS |
| CGAGGGATCCGAAGAATCGA+CGG | 0.570098 | 7.2:+15868107 | MS.gene52682:CDS |
| AAACGCCGTCTCGCCACCGA+TGG | 0.571083 | 7.2:+15867848 | MS.gene52682:CDS |
| GCGTTTGATGGAATCGGCGA+CGG | 0.574329 | 7.2:-15867831 | None:intergenic |
| GACTGAAGATACAGGTGCAA+TGG | 0.576249 | 7.2:+15868972 | MS.gene52682:CDS |
| TGAGTATGTGAAATTGATGA+AGG | 0.576385 | 7.2:+15868144 | MS.gene52682:CDS |
| GATGGTGAAGATGAGGTTGA+TGG | 0.578907 | 7.2:+15868579 | MS.gene52682:CDS |
| TCCCGTAGAGGATGTTGGGA+CGG | 0.579004 | 7.2:+15868390 | MS.gene52682:CDS |
| GATATTGCACAAAATCACCT+TGG | 0.583338 | 7.2:-15869152 | None:intergenic |
| AAGAATCCTGGATTGCTGAT+GGG | 0.583389 | 7.2:+15870038 | MS.gene52682:CDS |
| ATTCATTTACATGCTAGACA+TGG | 0.583889 | 7.2:+15868655 | MS.gene52682:CDS |
| TTCATCAACCAATGACTCAA+GGG | 0.587392 | 7.2:-15869031 | None:intergenic |
| CTTCATCAACCAATGACTCA+AGG | 0.590356 | 7.2:-15869032 | None:intergenic |
| TGATGTGACTGAGGAAGCTA+TGG | 0.592801 | 7.2:+15868174 | MS.gene52682:CDS |
| GGAGTATTCATCATTGCAAG+AGG | 0.593594 | 7.2:+15870132 | MS.gene52682:CDS |
| AGCGAAGGAGAGGGCTTCGG+AGG | 0.594136 | 7.2:-15867876 | None:intergenic |
| CCACATGAAAGCGGTGATAG+GGG | 0.595304 | 7.2:+15869324 | MS.gene52682:CDS |
| GCATTCACGAGTTGCAAGCA+AGG | 0.596300 | 7.2:+15869853 | MS.gene52682:CDS |
| AACGACCATCGGTGGCGAGA+CGG | 0.598780 | 7.2:-15867853 | None:intergenic |
| TTTCAGCTTCTCTTGCTCAG+AGG | 0.601560 | 7.2:+15868878 | MS.gene52682:CDS |
| GGTTTGGCTTGCTGAGCCGA+TGG | 0.602661 | 7.2:+15868561 | MS.gene52682:CDS |
| TTTGATGGAATCGGCGACGG+CGG | 0.604505 | 7.2:-15867828 | None:intergenic |
| CCCCTATCACCGCTTTCATG+TGG | 0.604989 | 7.2:-15869324 | None:intergenic |
| ATGACCCTGATATATTGGAT+AGG | 0.605262 | 7.2:+15869283 | MS.gene52682:CDS |
| ATGCTTGTCAAGGTGTGGAT+GGG | 0.607920 | 7.2:+15868212 | MS.gene52682:CDS |
| CCACTTATTATCGATATGAG+TGG | 0.611006 | 7.2:-15867927 | None:intergenic |
| GCGATTGACTGATAAGTCAT+CGG | 0.612217 | 7.2:+15870012 | MS.gene52682:CDS |
| GATTTATGCTTGTCAAGGTG+TGG | 0.612803 | 7.2:+15868207 | MS.gene52682:CDS |
| GGAAGAGAATGATGTGACTG+AGG | 0.613157 | 7.2:+15868165 | MS.gene52682:CDS |
| TGGTGTTGTGATTCTTGCGA+GGG | 0.613197 | 7.2:+15868090 | MS.gene52682:CDS |
| GATGTGATTTATGCTTGTCA+AGG | 0.615049 | 7.2:+15868202 | MS.gene52682:CDS |
| TGCACCTGTATCTTCAGTCG+CGG | 0.617973 | 7.2:-15868968 | None:intergenic |
| CTCGAGACCAGAAGAAAACA+CGG | 0.618015 | 7.2:+15869987 | MS.gene52682:CDS |
| TTATAAGCTTTGTGAATTAG+GGG | 0.619485 | 7.2:+15868318 | MS.gene52682:CDS |
| CACTCATATCGATAATAAGT+GGG | 0.620520 | 7.2:+15867928 | MS.gene52682:CDS |
| GAGGGATCCGAAGAATCGAC+GGG | 0.621176 | 7.2:+15868108 | MS.gene52682:CDS |
| TGATATATTGGATAGGCTCA+GGG | 0.621252 | 7.2:+15869290 | MS.gene52682:CDS |
| TTTGGGTAGGTCTCCCGTAG+AGG | 0.623399 | 7.2:+15868378 | MS.gene52682:CDS |
| AAATTGGGAAGAAGAACGGA+AGG | 0.626685 | 7.2:-15868013 | None:intergenic |
| AAAATTCATTGAAATCGAGA+CGG | 0.627773 | 7.2:-15870210 | None:intergenic |
| GTAAAGGTCAGCGAAGGAGA+GGG | 0.630006 | 7.2:-15867885 | None:intergenic |
| TGTTGGATGTAATTTATGAG+AGG | 0.636213 | 7.2:+15869079 | MS.gene52682:CDS |
| TTCGGAGGAACGACCATCGG+TGG | 0.637387 | 7.2:-15867861 | None:intergenic |
| GAATGCGGTGAGCGTAACGG+AGG | 0.637646 | 7.2:-15867766 | None:intergenic |
| GGGACTGAGAGAGTTCTCCA+AGG | 0.638568 | 7.2:-15869758 | None:intergenic |
| TGAGCCTATCCAATATATCA+GGG | 0.639430 | 7.2:-15869287 | None:intergenic |
| TCATTTACATGCTAGACATG+GGG | 0.643297 | 7.2:+15868657 | MS.gene52682:CDS |
| TCGCGGCACGAGCCCAACCA+CGG | 0.644910 | 7.2:-15868951 | None:intergenic |
| TGGTTCATGAGTTTATGAAG+AGG | 0.645000 | 7.2:+15868686 | MS.gene52682:CDS |
| AAAGCCTTAACAAAACGCGC+TGG | 0.650198 | 7.2:+15870064 | MS.gene52682:CDS |
| ATGGTGTTGTGATTCTTGCG+AGG | 0.657107 | 7.2:+15868089 | MS.gene52682:CDS |
| TCACAGAGTCTGTGATGGCG+AGG | 0.658020 | 7.2:+15869400 | MS.gene52682:CDS |
| AAATTTGATGAAGAAAGTGA+TGG | 0.658917 | 7.2:+15868244 | MS.gene52682:CDS |
| CTGAGCCGATGGTGAAGATG+AGG | 0.659393 | 7.2:+15868572 | MS.gene52682:CDS |
| AATGCGGTGAGCGTAACGGA+GGG | 0.662551 | 7.2:-15867765 | None:intergenic |
| TTAAATGGGAAGAGAGAATG+CGG | 0.665172 | 7.2:-15867781 | None:intergenic |
| TGTCTGAGGGTGTGAGTTCG+GGG | 0.665593 | 7.2:+15868512 | MS.gene52682:CDS |
| TTTGGTGTAAAGGTCAGCGA+AGG | 0.667117 | 7.2:-15867891 | None:intergenic |
| AGGGTCATTCGACTTAGCGG+CGG | 0.668047 | 7.2:-15867993 | None:intergenic |
| AAAATGATGCCACATGAAAG+CGG | 0.670653 | 7.2:+15869315 | MS.gene52682:CDS |
| CTCACACCCTCAGACAGCAA+CGG | 0.671898 | 7.2:-15868505 | None:intergenic |
| CGTGTTTGCTGTGAGGACCG+TGG | 0.673375 | 7.2:+15868934 | MS.gene52682:CDS |
| CTTCGTATAAAATATCCGCA+TGG | 0.678523 | 7.2:-15869830 | None:intergenic |
| GGTGCAATGGCAAGACGCGG+TGG | 0.689401 | 7.2:+15868985 | MS.gene52682:CDS |
| CTGGTCTCGAGAGGACAGTG+AGG | 0.696188 | 7.2:-15869975 | None:intergenic |
| GAGAATAACGTTCAAAGACG+CGG | 0.702247 | 7.2:+15868046 | MS.gene52682:CDS |
| TCTGTGAACACAGTATCTAG+CGG | 0.707638 | 7.2:-15869384 | None:intergenic |
| ACAGGTGCAATGGCAAGACG+CGG | 0.708229 | 7.2:+15868982 | MS.gene52682:CDS |
| TGTGTTCACAGAGTCTGTGA+TGG | 0.731653 | 7.2:+15869395 | MS.gene52682:CDS |
| AATTGGGAAGAAGAACGGAA+GGG | 0.734226 | 7.2:-15868012 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAATTTTTAATTTTCTA+TGG | + | chr7.2:15869427-15869446 | MS.gene52682:CDS | 10.0% |
| !!! | AATATCTAATGGATATTGTT+GGG | + | chr7.2:15869169-15869188 | MS.gene52682:CDS | 20.0% |
| !!! | ATGTTTTATTGGATTCAATT+AGG | + | chr7.2:15868269-15868288 | MS.gene52682:CDS | 20.0% |
| !!! | ATTTCAATGAATTTTATAGG+CGG | + | chr7.2:15870218-15870237 | MS.gene52682:CDS | 20.0% |
| !!! | GAAAATAATGGATTTAATGA+TGG | + | chr7.2:15868070-15868089 | MS.gene52682:CDS | 20.0% |
| !!! | TCGATTTCAATGAATTTTAT+AGG | + | chr7.2:15870215-15870234 | MS.gene52682:CDS | 20.0% |
| !!! | TGTTTTATTGGATTCAATTA+GGG | + | chr7.2:15868270-15868289 | MS.gene52682:CDS | 20.0% |
| !!! | TTATATAATGTTTGAAGTCT+TGG | + | chr7.2:15869629-15869648 | MS.gene52682:CDS | 20.0% |
| !!! | TTGATCTTATATTACGTTTT+CGG | + | chr7.2:15869805-15869824 | MS.gene52682:CDS | 20.0% |
| !!! | TTTATAAGCTTTGTGAATTA+GGG | + | chr7.2:15868317-15868336 | MS.gene52682:CDS | 20.0% |
| ! | AAAATTCATTGAAATCGAGA+CGG | - | chr7.2:15870213-15870232 | None:intergenic | 25.0% |
| ! | AAATTTGATGAAGAAAGTGA+TGG | + | chr7.2:15868244-15868263 | MS.gene52682:CDS | 25.0% |
| ! | AAGCTTCAAAAAGAATTGAT+AGG | + | chr7.2:15869052-15869071 | MS.gene52682:CDS | 25.0% |
| ! | GAGTGATTATTATAAGTTGT+TGG | + | chr7.2:15868450-15868469 | MS.gene52682:CDS | 25.0% |
| !! | AAGTGATGGTTATGTTTTAT+TGG | + | chr7.2:15868258-15868277 | MS.gene52682:CDS | 25.0% |
| !! | CAATATCTAATGGATATTGT+TGG | + | chr7.2:15869168-15869187 | MS.gene52682:CDS | 25.0% |
| !! | GTTTATAAGCTTTGTGAATT+AGG | + | chr7.2:15868316-15868335 | MS.gene52682:CDS | 25.0% |
| !! | TACTATTAGTGACTTGTAAA+GGG | - | chr7.2:15869781-15869800 | None:intergenic | 25.0% |
| !! | TGATTTTGTGCAATATCTAA+TGG | + | chr7.2:15869158-15869177 | MS.gene52682:CDS | 25.0% |
| !! | TTACTATTAGTGACTTGTAA+AGG | - | chr7.2:15869782-15869801 | None:intergenic | 25.0% |
| !! | TTATAAGCTTTGTGAATTAG+GGG | + | chr7.2:15868318-15868337 | MS.gene52682:CDS | 25.0% |
| !! | TTGTTGAGTTTTTCATTGTT+GGG | + | chr7.2:15868785-15868804 | MS.gene52682:CDS | 25.0% |
| !! | TTTCAATGAATTTTATAGGC+GGG | + | chr7.2:15870219-15870238 | MS.gene52682:CDS | 25.0% |
| !! | TTTGTTGAGTTTTTCATTGT+TGG | + | chr7.2:15868784-15868803 | MS.gene52682:CDS | 25.0% |
| AAATGTCAAACATGGCAATA+TGG | - | chr7.2:15869925-15869944 | None:intergenic | 30.0% | |
| AATGTCAAACATGGCAATAT+GGG | - | chr7.2:15869924-15869943 | None:intergenic | 30.0% | |
| AGAGAAGCTGAAATAAAAGA+AGG | - | chr7.2:15868871-15868890 | None:intergenic | 30.0% | |
| AGATGATCAAATGTCAAACA+TGG | - | chr7.2:15869933-15869952 | None:intergenic | 30.0% | |
| AGCATGTTGCAATCTATTAA+AGG | - | chr7.2:15869526-15869545 | None:intergenic | 30.0% | |
| ATTCATTTACATGCTAGACA+TGG | + | chr7.2:15868655-15868674 | MS.gene52682:CDS | 30.0% | |
| ATTCTCCGAAATCGTTAAAT+TGG | - | chr7.2:15868032-15868051 | None:intergenic | 30.0% | |
| CACTCATATCGATAATAAGT+GGG | + | chr7.2:15867928-15867947 | MS.gene52682:CDS | 30.0% | |
| GATATTGAAGAGATGAAGTA+GGG | - | chr7.2:15867954-15867973 | None:intergenic | 30.0% | |
| GTATTAGAAGTTATGCAGTT+TGG | - | chr7.2:15869504-15869523 | None:intergenic | 30.0% | |
| TATTGTTTAAGAGGGTTGTT+GGG | + | chr7.2:15868341-15868360 | MS.gene52682:CDS | 30.0% | |
| TCTTCCCAATTTAACGATTT+CGG | + | chr7.2:15868024-15868043 | MS.gene52682:CDS | 30.0% | |
| TGAGTATGTGAAATTGATGA+AGG | + | chr7.2:15868144-15868163 | MS.gene52682:CDS | 30.0% | |
| TGATATTGAAGAGATGAAGT+AGG | - | chr7.2:15867955-15867974 | None:intergenic | 30.0% | |
| TGGTGAATTTCTCCAAAAAA+TGG | + | chr7.2:15870084-15870103 | MS.gene52682:CDS | 30.0% | |
| TGTTGGATGTAATTTATGAG+AGG | + | chr7.2:15869079-15869098 | MS.gene52682:CDS | 30.0% | |
| TTCATAAACTCATGAACCAT+CGG | - | chr7.2:15868685-15868704 | None:intergenic | 30.0% | |
| TTCATTTACATGCTAGACAT+GGG | + | chr7.2:15868656-15868675 | MS.gene52682:CDS | 30.0% | |
| TTCTCCGAAATCGTTAAATT+GGG | - | chr7.2:15868031-15868050 | None:intergenic | 30.0% | |
| TTGAAGTCTTGGAAATATCA+TGG | + | chr7.2:15869640-15869659 | MS.gene52682:CDS | 30.0% | |
| !! | AATTAGGGGTATTGTTTAAG+AGG | + | chr7.2:15868332-15868351 | MS.gene52682:CDS | 30.0% |
| !! | ATTAGGGGTATTGTTTAAGA+GGG | + | chr7.2:15868333-15868352 | MS.gene52682:CDS | 30.0% |
| !!! | GTCAAACTTTTTAAGTGAGA+TGG | + | chr7.2:15869662-15869681 | MS.gene52682:CDS | 30.0% |
| AAAATGATGCCACATGAAAG+CGG | + | chr7.2:15869315-15869334 | MS.gene52682:CDS | 35.0% | |
| AAAGAGCTTATTGTGTTTGC+GGG | - | chr7.2:15869210-15869229 | None:intergenic | 35.0% | |
| AAGAATTGATAGGCATCTGT+TGG | + | chr7.2:15869062-15869081 | MS.gene52682:CDS | 35.0% | |
| AAGTAGATCATCAAGATCCT+TGG | - | chr7.2:15869694-15869713 | None:intergenic | 35.0% | |
| AATATGGGGAGAAGAAATTG+AGG | - | chr7.2:15869909-15869928 | None:intergenic | 35.0% | |
| AGATCTGGATGCAATATCTA+AGG | + | chr7.2:15870111-15870130 | MS.gene52682:CDS | 35.0% | |
| ATAAGCTCTTTCAAACTTGC+AGG | + | chr7.2:15869219-15869238 | MS.gene52682:CDS | 35.0% | |
| ATGACCCTGATATATTGGAT+AGG | + | chr7.2:15869283-15869302 | MS.gene52682:CDS | 35.0% | |
| ATGTCAAACATGGCAATATG+GGG | - | chr7.2:15869923-15869942 | None:intergenic | 35.0% | |
| ATTATCGATATGAGTGGCTT+TGG | - | chr7.2:15867924-15867943 | None:intergenic | 35.0% | |
| ATTGTAGAGAAATCTCTCCT+TGG | + | chr7.2:15869741-15869760 | MS.gene52682:CDS | 35.0% | |
| CCAAAAAATGGAACAAGATC+TGG | + | chr7.2:15870096-15870115 | MS.gene52682:CDS | 35.0% | |
| CCACTCATATCGATAATAAG+TGG | + | chr7.2:15867927-15867946 | MS.gene52682:CDS | 35.0% | |
| CCACTTATTATCGATATGAG+TGG | - | chr7.2:15867930-15867949 | None:intergenic | 35.0% | |
| CGTTAAATTGGGAAGAAGAA+CGG | - | chr7.2:15868020-15868039 | None:intergenic | 35.0% | |
| CTCTTCACCATTTCAAAAAG+CGG | - | chr7.2:15868733-15868752 | None:intergenic | 35.0% | |
| CTTCGTATAAAATATCCGCA+TGG | - | chr7.2:15869833-15869852 | None:intergenic | 35.0% | |
| GAAAGAGCTTATTGTGTTTG+CGG | - | chr7.2:15869211-15869230 | None:intergenic | 35.0% | |
| GATATTGCACAAAATCACCT+TGG | - | chr7.2:15869155-15869174 | None:intergenic | 35.0% | |
| GATGTGATTTATGCTTGTCA+AGG | + | chr7.2:15868202-15868221 | MS.gene52682:CDS | 35.0% | |
| GCAAACACGGAGAAAATTTA+TGG | - | chr7.2:15868923-15868942 | None:intergenic | 35.0% | |
| GGATTCAATTAGGGTTTCTA+GGG | + | chr7.2:15868279-15868298 | MS.gene52682:CDS | 35.0% | |
| GGGTTTATTGAGATGAGTTT+GGG | + | chr7.2:15868361-15868380 | MS.gene52682:CDS | 35.0% | |
| GTATGATGACCCTGATATAT+TGG | + | chr7.2:15869278-15869297 | MS.gene52682:CDS | 35.0% | |
| GTATTGTTTAAGAGGGTTGT+TGG | + | chr7.2:15868340-15868359 | MS.gene52682:CDS | 35.0% | |
| TAATTTCAACCCAGAGAACT+TGG | - | chr7.2:15869584-15869603 | None:intergenic | 35.0% | |
| TCATTTACATGCTAGACATG+GGG | + | chr7.2:15868657-15868676 | MS.gene52682:CDS | 35.0% | |
| TGAGCCTATCCAATATATCA+GGG | - | chr7.2:15869290-15869309 | None:intergenic | 35.0% | |
| TGATATATTGGATAGGCTCA+GGG | + | chr7.2:15869290-15869309 | MS.gene52682:CDS | 35.0% | |
| TGGATTCAATTAGGGTTTCT+AGG | + | chr7.2:15868278-15868297 | MS.gene52682:CDS | 35.0% | |
| TGGGTTTATTGAGATGAGTT+TGG | + | chr7.2:15868360-15868379 | MS.gene52682:CDS | 35.0% | |
| TGGTTCATGAGTTTATGAAG+AGG | + | chr7.2:15868686-15868705 | MS.gene52682:CDS | 35.0% | |
| TTAAATGGGAAGAGAGAATG+CGG | - | chr7.2:15867784-15867803 | None:intergenic | 35.0% | |
| TTATTGAGATGAGTTTGGGT+AGG | + | chr7.2:15868365-15868384 | MS.gene52682:CDS | 35.0% | |
| TTCATCAACCAATGACTCAA+GGG | - | chr7.2:15869034-15869053 | None:intergenic | 35.0% | |
| TTTATCGTTGAGGAGATTAG+CGG | + | chr7.2:15868540-15868559 | MS.gene52682:CDS | 35.0% | |
| ! | AGATTTGGTTGAGAAGTGTA+GGG | + | chr7.2:15868603-15868622 | MS.gene52682:CDS | 35.0% |
| ! | AGTTATGCAGTTTGGTTTCA+TGG | - | chr7.2:15869496-15869515 | None:intergenic | 35.0% |
| ! | ATTAAGCGGTATTTGTTGCT+TGG | + | chr7.2:15869129-15869148 | MS.gene52682:CDS | 35.0% |
| ! | CATGCGGATATTTTATACGA+AGG | + | chr7.2:15869831-15869850 | MS.gene52682:CDS | 35.0% |
| !!! | CCAGATCTTGTTCCATTTTT+TGG | - | chr7.2:15870099-15870118 | None:intergenic | 35.0% |
| !!! | GTTTATGGGTTGGGAATTTT+GGG | - | chr7.2:15867720-15867739 | None:intergenic | 35.0% |
| !!! | TTTATGGGTTGGGAATTTTG+GGG | - | chr7.2:15867719-15867738 | None:intergenic | 35.0% |
| !!! | TTTTGAAATGGTGAAGAGGT+GGG | + | chr7.2:15868735-15868754 | MS.gene52682:CDS | 35.0% |
| !!! | TTTTTGAAATGGTGAAGAGG+TGG | + | chr7.2:15868734-15868753 | MS.gene52682:CDS | 35.0% |
| AAATTGGGAAGAAGAACGGA+AGG | - | chr7.2:15868016-15868035 | None:intergenic | 40.0% | |
| AACTGATACCCTTGAGTCAT+TGG | + | chr7.2:15869023-15869042 | MS.gene52682:CDS | 40.0% | |
| AAGAATCCTGGATTGCTGAT+GGG | + | chr7.2:15870038-15870057 | MS.gene52682:CDS | 40.0% | |
| AATTGGGAAGAAGAACGGAA+GGG | - | chr7.2:15868015-15868034 | None:intergenic | 40.0% | |
| AGAGTGGAACATGCACTTAT+TGG | + | chr7.2:15869459-15869478 | MS.gene52682:CDS | 40.0% | |
| AGCATTGTCTTGCGATTAAG+CGG | + | chr7.2:15869115-15869134 | MS.gene52682:CDS | 40.0% | |
| ATCAACCTCATCTTCACCAT+CGG | - | chr7.2:15868580-15868599 | None:intergenic | 40.0% | |
| CAAAGACGCGGTGAAAATAA+TGG | + | chr7.2:15868058-15868077 | MS.gene52682:CDS | 40.0% | |
| CGGGGAATTATTTATCGTTG+AGG | + | chr7.2:15868530-15868549 | MS.gene52682:CDS | 40.0% | |
| CTGAGCCTATCCAATATATC+AGG | - | chr7.2:15869291-15869310 | None:intergenic | 40.0% | |
| CTGATATATTGGATAGGCTC+AGG | + | chr7.2:15869289-15869308 | MS.gene52682:CDS | 40.0% | |
| CTTCATCAACCAATGACTCA+AGG | - | chr7.2:15869035-15869054 | None:intergenic | 40.0% | |
| GAGAATAACGTTCAAAGACG+CGG | + | chr7.2:15868046-15868065 | MS.gene52682:CDS | 40.0% | |
| GATTTATGCTTGTCAAGGTG+TGG | + | chr7.2:15868207-15868226 | MS.gene52682:CDS | 40.0% | |
| GCGATTGACTGATAAGTCAT+CGG | + | chr7.2:15870012-15870031 | MS.gene52682:CDS | 40.0% | |
| TCTATGGAAGCTTAAGAGAG+TGG | + | chr7.2:15869443-15869462 | MS.gene52682:CDS | 40.0% | |
| TCTGTGAACACAGTATCTAG+CGG | - | chr7.2:15869387-15869406 | None:intergenic | 40.0% | |
| TTTCAAACTTGCAGGTTTGC+TGG | + | chr7.2:15869227-15869246 | MS.gene52682:CDS | 40.0% | |
| TTTGCTGGAAACTGCAATTC+GGG | + | chr7.2:15869242-15869261 | MS.gene52682:CDS | 40.0% | |
| ! | ACTAGGGCTTTTACTAGATC+TGG | - | chr7.2:15867671-15867690 | None:intergenic | 40.0% |
| ! | CAGATTTGGTTGAGAAGTGT+AGG | + | chr7.2:15868602-15868621 | MS.gene52682:CDS | 40.0% |
| ! | CTAGGGCTTTTACTAGATCT+GGG | - | chr7.2:15867670-15867689 | None:intergenic | 40.0% |
| ! | GGAGTATTCATCATTGCAAG+AGG | + | chr7.2:15870132-15870151 | MS.gene52682:CDS | 40.0% |
| ! | GTTTGCTGGAAACTGCAATT+CGG | + | chr7.2:15869241-15869260 | MS.gene52682:CDS | 40.0% |
| ! | TTTGGAATTGAGGGGAGTTA+GGG | - | chr7.2:15867742-15867761 | None:intergenic | 40.0% |
| !! | TGGTGGAGAATTTGGTGTAA+AGG | - | chr7.2:15867904-15867923 | None:intergenic | 40.0% |
| !! | TTCTAGGGCTAGTAGTAGTA+TGG | + | chr7.2:15868294-15868313 | MS.gene52682:CDS | 40.0% |
| !!! | AAGTGTAGGGTTTTAAGAGG+TGG | + | chr7.2:15868616-15868635 | MS.gene52682:CDS | 40.0% |
| !!! | AGTGTAGGGTTTTAAGAGGT+GGG | + | chr7.2:15868617-15868636 | MS.gene52682:CDS | 40.0% |
| !!! | CGCTTTTTGAAATGGTGAAG+AGG | + | chr7.2:15868731-15868750 | MS.gene52682:CDS | 40.0% |
| !!! | GAGAAGTGTAGGGTTTTAAG+AGG | + | chr7.2:15868613-15868632 | MS.gene52682:CDS | 40.0% |
| !!! | GGTTTATGGGTTGGGAATTT+TGG | - | chr7.2:15867721-15867740 | None:intergenic | 40.0% |
| !!! | GTGTTCTCCGCTTTTTGAAA+TGG | + | chr7.2:15868723-15868742 | MS.gene52682:CDS | 40.0% |
| !!! | TTATGGGTTGGGAATTTTGG+GGG | - | chr7.2:15867718-15867737 | None:intergenic | 40.0% |
| !!! | TTTTGGAATTGAGGGGAGTT+AGG | - | chr7.2:15867743-15867762 | None:intergenic | 40.0% |
| AAAGCCTTAACAAAACGCGC+TGG | + | chr7.2:15870064-15870083 | MS.gene52682:CDS | 45.0% | |
| AAGTGAGATGGAAGTAGCCA+AGG | + | chr7.2:15869674-15869693 | MS.gene52682:CDS | 45.0% | |
| AGTCATCGGAAGAAGAATCC+TGG | + | chr7.2:15870026-15870045 | MS.gene52682:CDS | 45.0% | |
| ATGCTTGTCAAGGTGTGGAT+GGG | + | chr7.2:15868212-15868231 | MS.gene52682:CDS | 45.0% | |
| CAAAGCGATTCAGCTTTCAC+AGG | - | chr7.2:15868814-15868833 | None:intergenic | 45.0% | |
| CTCGAGACCAGAAGAAAACA+CGG | + | chr7.2:15869987-15870006 | MS.gene52682:CDS | 45.0% | |
| CTGTGAAAGCTGAATCGCTT+TGG | + | chr7.2:15868812-15868831 | MS.gene52682:CDS | 45.0% | |
| GAAGAATCCTGGATTGCTGA+TGG | + | chr7.2:15870037-15870056 | MS.gene52682:CDS | 45.0% | |
| GACTGAAGATACAGGTGCAA+TGG | + | chr7.2:15868972-15868991 | MS.gene52682:CDS | 45.0% | |
| GATGGTGAAGATGAGGTTGA+TGG | + | chr7.2:15868579-15868598 | MS.gene52682:CDS | 45.0% | |
| GGAAGAGAATGATGTGACTG+AGG | + | chr7.2:15868165-15868184 | MS.gene52682:CDS | 45.0% | |
| GGAGTTAGGGTTTATGGGTT+GGG | - | chr7.2:15867729-15867748 | None:intergenic | 45.0% | |
| TATGCTTGTCAAGGTGTGGA+TGG | + | chr7.2:15868211-15868230 | MS.gene52682:CDS | 45.0% | |
| TGAGGGGAGTTAGGGTTTAT+GGG | - | chr7.2:15867734-15867753 | None:intergenic | 45.0% | |
| TGATGTGACTGAGGAAGCTA+TGG | + | chr7.2:15868174-15868193 | MS.gene52682:CDS | 45.0% | |
| TGTGTTCACAGAGTCTGTGA+TGG | + | chr7.2:15869395-15869414 | MS.gene52682:CDS | 45.0% | |
| TTGAGGGGAGTTAGGGTTTA+TGG | - | chr7.2:15867735-15867754 | None:intergenic | 45.0% | |
| TTTCAGCTTCTCTTGCTCAG+AGG | + | chr7.2:15868878-15868897 | MS.gene52682:CDS | 45.0% | |
| ! | AACATGCACTTATTGGTGCC+TGG | + | chr7.2:15869466-15869485 | MS.gene52682:CDS | 45.0% |
| ! | ATCGCTTCCGTGTTTTCTTC+TGG | - | chr7.2:15869997-15870016 | None:intergenic | 45.0% |
| ! | ATTACGTTTTCGGAGCCATG+CGG | + | chr7.2:15869815-15869834 | MS.gene52682:CDS | 45.0% |
| ! | CTCTTGCTCAGAGGATTTTG+AGG | + | chr7.2:15868887-15868906 | MS.gene52682:CDS | 45.0% |
| ! | GTTTGGTTTCATGGTCTTCC+AGG | - | chr7.2:15869487-15869506 | None:intergenic | 45.0% |
| ! | TAAGTTGTTGGCTGTGCTTG+AGG | + | chr7.2:15868462-15868481 | MS.gene52682:CDS | 45.0% |
| ! | TGCAGCTAGTTTCAGCATTG+AGG | + | chr7.2:15869553-15869572 | MS.gene52682:CDS | 45.0% |
| ! | TGTTTTCTTCTGGTCTCGAG+AGG | - | chr7.2:15869987-15870006 | None:intergenic | 45.0% |
| ! | TTTGGTGTAAAGGTCAGCGA+AGG | - | chr7.2:15867894-15867913 | None:intergenic | 45.0% |
| ! | TTTTCTCCCATCAGCAATCC+AGG | - | chr7.2:15870047-15870066 | None:intergenic | 45.0% |
| !! | AATGGTGAAGAGGTGGGTTT+TGG | + | chr7.2:15868741-15868760 | MS.gene52682:CDS | 45.0% |
| !! | AGTGGCTTTGGTGGAGAATT+TGG | - | chr7.2:15867912-15867931 | None:intergenic | 45.0% |
| !! | ATCGATATGAGTGGCTTTGG+TGG | - | chr7.2:15867921-15867940 | None:intergenic | 45.0% |
| !! | ATGGTGTTGTGATTCTTGCG+AGG | + | chr7.2:15868089-15868108 | MS.gene52682:CDS | 45.0% |
| !! | GATGAGGTTGATGGCAGATT+TGG | + | chr7.2:15868588-15868607 | MS.gene52682:CDS | 45.0% |
| !! | GCTATTTCCCGTCGATTCTT+CGG | - | chr7.2:15868118-15868137 | None:intergenic | 45.0% |
| !! | TGGTGTTGTGATTCTTGCGA+GGG | + | chr7.2:15868090-15868109 | MS.gene52682:CDS | 45.0% |
| !! | TTCACCAGCGCGTTTTGTTA+AGG | - | chr7.2:15870071-15870090 | None:intergenic | 45.0% |
| !! | TTTGGGGGAGATTTTGAGAG+AGG | - | chr7.2:15867703-15867722 | None:intergenic | 45.0% |
| !!! | GAGGGAGTTTTGGAATTGAG+GGG | - | chr7.2:15867750-15867769 | None:intergenic | 45.0% |
| !!! | GGAGGGAGTTTTGGAATTGA+GGG | - | chr7.2:15867751-15867770 | None:intergenic | 45.0% |
| !!! | GTGTAGGGTTTTAAGAGGTG+GGG | + | chr7.2:15868618-15868637 | MS.gene52682:CDS | 45.0% |
| !!! | TGAAGAGGTGGGTTTTGGAA+GGG | + | chr7.2:15868746-15868765 | MS.gene52682:CDS | 45.0% |
| !!! | TTTTCTCCGTGTTTGCTGTG+AGG | + | chr7.2:15868927-15868946 | MS.gene52682:CDS | 45.0% |
| AACCGTCCCAACATCCTCTA+CGG | - | chr7.2:15868395-15868414 | None:intergenic | 50.0% | |
| AGAGAATGCGGTGAGCGTAA+CGG | - | chr7.2:15867772-15867791 | None:intergenic | 50.0% | |
| AGATCAACATGCTGCTGCAC+AGG | - | chr7.2:15870175-15870194 | None:intergenic | 50.0% | |
| CCACATGAAAGCGGTGATAG+GGG | + | chr7.2:15869324-15869343 | MS.gene52682:CDS | 50.0% | |
| CGTTGAGGAGATTAGCGGTT+TGG | + | chr7.2:15868545-15868564 | MS.gene52682:CDS | 50.0% | |
| GAGACGGCGTTTGATGGAAT+CGG | - | chr7.2:15867840-15867859 | None:intergenic | 50.0% | |
| GCATTCACGAGTTGCAAGCA+AGG | + | chr7.2:15869853-15869872 | MS.gene52682:CDS | 50.0% | |
| GCCACATGAAAGCGGTGATA+GGG | + | chr7.2:15869323-15869342 | MS.gene52682:CDS | 50.0% | |
| GGAAGGGTCATTCGACTTAG+CGG | - | chr7.2:15867999-15868018 | None:intergenic | 50.0% | |
| GGGAGTTAGGGTTTATGGGT+TGG | - | chr7.2:15867730-15867749 | None:intergenic | 50.0% | |
| GTAAAGGTCAGCGAAGGAGA+GGG | - | chr7.2:15867888-15867907 | None:intergenic | 50.0% | |
| TAGAGGATGTTGGGACGGTT+GGG | + | chr7.2:15868395-15868414 | MS.gene52682:CDS | 50.0% | |
| TGCACCTGTATCTTCAGTCG+CGG | - | chr7.2:15868971-15868990 | None:intergenic | 50.0% | |
| TGCCACATGAAAGCGGTGAT+AGG | + | chr7.2:15869322-15869341 | MS.gene52682:CDS | 50.0% | |
| TGTAAAGGTCAGCGAAGGAG+AGG | - | chr7.2:15867889-15867908 | None:intergenic | 50.0% | |
| TTTGCGGGCACAGAAAGTTC+AGG | - | chr7.2:15869195-15869214 | None:intergenic | 50.0% | |
| ! | CGGTATTTGTTGCTTGGCCA+AGG | + | chr7.2:15869135-15869154 | MS.gene52682:CDS | 50.0% |
| ! | GGCTTTTTGTGCTGCATTGC+AGG | + | chr7.2:15868420-15868439 | MS.gene52682:CDS | 50.0% |
| !! | AGCTGAATCGCTTTGGAGAG+AGG | + | chr7.2:15868819-15868838 | MS.gene52682:CDS | 50.0% |
| !! | CGCTTTGGAGAGAGGGATAT+AGG | + | chr7.2:15868827-15868846 | MS.gene52682:CDS | 50.0% |
| !! | GATTTTGAGAGAGGAGGTGG+TGG | - | chr7.2:15867694-15867713 | None:intergenic | 50.0% |
| !! | GCTCAGAGGATTTTGAGGAC+TGG | + | chr7.2:15868892-15868911 | MS.gene52682:CDS | 50.0% |
| !! | GCTGAATCGCTTTGGAGAGA+GGG | + | chr7.2:15868820-15868839 | MS.gene52682:CDS | 50.0% |
| !! | GGAGATTTTGAGAGAGGAGG+TGG | - | chr7.2:15867697-15867716 | None:intergenic | 50.0% |
| !! | GGTGATGGAGGGGGTTAAAT+GGG | - | chr7.2:15867798-15867817 | None:intergenic | 50.0% |
| !!! | AGACGCGGTGGTTTTGGTTA+CGG | + | chr7.2:15868997-15869016 | MS.gene52682:CDS | 50.0% |
| !!! | CGGAGGGAGTTTTGGAATTG+AGG | - | chr7.2:15867752-15867771 | None:intergenic | 50.0% |
| !!! | GAAGAGGTGGGTTTTGGAAG+GGG | + | chr7.2:15868747-15868766 | MS.gene52682:CDS | 50.0% |
| !!! | GTGAAGAGGTGGGTTTTGGA+AGG | + | chr7.2:15868745-15868764 | MS.gene52682:CDS | 50.0% |
| ACAGGTGCAATGGCAAGACG+CGG | + | chr7.2:15868982-15869001 | MS.gene52682:CDS | 55.0% | |
| ACCGTCCCAACATCCTCTAC+GGG | - | chr7.2:15868394-15868413 | None:intergenic | 55.0% | |
| AGGGTCATTCGACTTAGCGG+CGG | - | chr7.2:15867996-15868015 | None:intergenic | 55.0% | |
| AGGTCTCCCGTAGAGGATGT+TGG | + | chr7.2:15868385-15868404 | MS.gene52682:CDS | 55.0% | |
| ATGAAAGCGGTGATAGGGGC+TGG | + | chr7.2:15869328-15869347 | MS.gene52682:CDS | 55.0% | |
| CACGGTCCTCACAGCAAACA+CGG | - | chr7.2:15868936-15868955 | None:intergenic | 55.0% | |
| CCCCTATCACCGCTTTCATG+TGG | - | chr7.2:15869327-15869346 | None:intergenic | 55.0% | |
| CCCTCAGACAGCAACGGAAT+CGG | - | chr7.2:15868502-15868521 | None:intergenic | 55.0% | |
| CCGATTCCGTTGCTGTCTGA+GGG | + | chr7.2:15868499-15868518 | MS.gene52682:CDS | 55.0% | |
| CGAGGGATCCGAAGAATCGA+CGG | + | chr7.2:15868107-15868126 | MS.gene52682:CDS | 55.0% | |
| CTCACACCCTCAGACAGCAA+CGG | - | chr7.2:15868508-15868527 | None:intergenic | 55.0% | |
| CTGAGCCGATGGTGAAGATG+AGG | + | chr7.2:15868572-15868591 | MS.gene52682:CDS | 55.0% | |
| GAGGGATCCGAAGAATCGAC+GGG | + | chr7.2:15868108-15868127 | MS.gene52682:CDS | 55.0% | |
| GCGTTTGATGGAATCGGCGA+CGG | - | chr7.2:15867834-15867853 | None:intergenic | 55.0% | |
| GGGACTGAGAGAGTTCTCCA+AGG | - | chr7.2:15869761-15869780 | None:intergenic | 55.0% | |
| GGGCTGGGATGTATTCTCAC+TGG | + | chr7.2:15869344-15869363 | MS.gene52682:CDS | 55.0% | |
| GGTCTCCCGTAGAGGATGTT+GGG | + | chr7.2:15868386-15868405 | MS.gene52682:CDS | 55.0% | |
| GTAGAGGATGTTGGGACGGT+TGG | + | chr7.2:15868394-15868413 | MS.gene52682:CDS | 55.0% | |
| TCCCGTAGAGGATGTTGGGA+CGG | + | chr7.2:15868390-15868409 | MS.gene52682:CDS | 55.0% | |
| TCCGATTCCGTTGCTGTCTG+AGG | + | chr7.2:15868498-15868517 | MS.gene52682:CDS | 55.0% | |
| TGAAAGCGGTGATAGGGGCT+GGG | + | chr7.2:15869329-15869348 | MS.gene52682:CDS | 55.0% | |
| TGCTAGACATGGGGATCCGA+TGG | + | chr7.2:15868666-15868685 | MS.gene52682:CDS | 55.0% | |
| TTGCTGTGAGGACCGTGGTT+GGG | + | chr7.2:15868939-15868958 | MS.gene52682:CDS | 55.0% | |
| TTTAAGAGGTGGGGCGATGG+CGG | + | chr7.2:15868627-15868646 | MS.gene52682:CDS | 55.0% | |
| TTTGATGGAATCGGCGACGG+CGG | - | chr7.2:15867831-15867850 | None:intergenic | 55.0% | |
| TTTGGGTAGGTCTCCCGTAG+AGG | + | chr7.2:15868378-15868397 | MS.gene52682:CDS | 55.0% | |
| ! | AATGCGGTGAGCGTAACGGA+GGG | - | chr7.2:15867768-15867787 | None:intergenic | 55.0% |
| ! | ATGGCAAGACGCGGTGGTTT+TGG | + | chr7.2:15868991-15869010 | MS.gene52682:CDS | 55.0% |
| ! | CTGTCTGAGGGTGTGAGTTC+GGG | + | chr7.2:15868511-15868530 | MS.gene52682:CDS | 55.0% |
| ! | GCTGTCTGAGGGTGTGAGTT+CGG | + | chr7.2:15868510-15868529 | MS.gene52682:CDS | 55.0% |
| ! | TCACAGAGTCTGTGATGGCG+AGG | + | chr7.2:15869400-15869419 | MS.gene52682:CDS | 55.0% |
| ! | TGTCTGAGGGTGTGAGTTCG+GGG | + | chr7.2:15868512-15868531 | MS.gene52682:CDS | 55.0% |
| ! | TTTGCTGTGAGGACCGTGGT+TGG | + | chr7.2:15868938-15868957 | MS.gene52682:CDS | 55.0% |
| !! | AGAGAGGAGGTGGTGGACTA+GGG | - | chr7.2:15867687-15867706 | None:intergenic | 55.0% |
| !! | GAGCGTAACGGAGGGAGTTT+TGG | - | chr7.2:15867760-15867779 | None:intergenic | 55.0% |
| !! | GGGGGAGATTTTGAGAGAGG+AGG | - | chr7.2:15867700-15867719 | None:intergenic | 55.0% |
| !! | GGGTGATGGAGGGGGTTAAA+TGG | - | chr7.2:15867799-15867818 | None:intergenic | 55.0% |
| !!! | ACGCGGTGGTTTTGGTTACG+GGG | + | chr7.2:15868999-15869018 | MS.gene52682:CDS | 55.0% |
| !!! | GACGCGGTGGTTTTGGTTAC+GGG | + | chr7.2:15868998-15869017 | MS.gene52682:CDS | 55.0% |
| !!! | GGTTTTAAGAGGTGGGGCGA+TGG | + | chr7.2:15868624-15868643 | MS.gene52682:CDS | 55.0% |
| !!! | GTGGGTTTTGGAAGGGGAGT+TGG | + | chr7.2:15868753-15868772 | MS.gene52682:CDS | 55.0% |
| AACGACCATCGGTGGCGAGA+CGG | - | chr7.2:15867856-15867875 | None:intergenic | 60.0% | |
| CGTGCCGCGACTGAAGATAC+AGG | + | chr7.2:15868964-15868983 | MS.gene52682:CDS | 60.0% | |
| CTGGTCTCGAGAGGACAGTG+AGG | - | chr7.2:15869978-15869997 | None:intergenic | 60.0% | |
| GAATGCGGTGAGCGTAACGG+AGG | - | chr7.2:15867769-15867788 | None:intergenic | 60.0% | |
| GGCTTCGGAGGAACGACCAT+CGG | - | chr7.2:15867867-15867886 | None:intergenic | 60.0% | |
| GTCAGCGAAGGAGAGGGCTT+CGG | - | chr7.2:15867882-15867901 | None:intergenic | 60.0% | |
| TTAAGAGGTGGGGCGATGGC+GGG | + | chr7.2:15868628-15868647 | MS.gene52682:CDS | 60.0% | |
| TTCGGAGGAACGACCATCGG+TGG | - | chr7.2:15867864-15867883 | None:intergenic | 60.0% | |
| !! | CGTGTTTGCTGTGAGGACCG+TGG | + | chr7.2:15868934-15868953 | MS.gene52682:CDS | 60.0% |
| !! | GAGAGAGGAGGTGGTGGACT+AGG | - | chr7.2:15867688-15867707 | None:intergenic | 60.0% |
| !! | GAGGCGCTGCCAAGTTCTCT+GGG | + | chr7.2:15869572-15869591 | MS.gene52682:CDS | 60.0% |
| !! | GGTTTGGCTTGCTGAGCCGA+TGG | + | chr7.2:15868561-15868580 | MS.gene52682:CDS | 60.0% |
| !! | TGAGGCGCTGCCAAGTTCTC+TGG | + | chr7.2:15869571-15869590 | MS.gene52682:CDS | 60.0% |
| AAACGCCGTCTCGCCACCGA+TGG | + | chr7.2:15867848-15867867 | MS.gene52682:CDS | 65.0% | |
| AGCGAAGGAGAGGGCTTCGG+AGG | - | chr7.2:15867879-15867898 | None:intergenic | 65.0% | |
| GGATGTTGGGACGGTTGGGC+AGG | + | chr7.2:15868399-15868418 | MS.gene52682:CDS | 65.0% | |
| GGTGCAATGGCAAGACGCGG+TGG | + | chr7.2:15868985-15869004 | MS.gene52682:CDS | 65.0% | |
| GGTGGCGAGACGGCGTTTGA+TGG | - | chr7.2:15867846-15867865 | None:intergenic | 65.0% | |
| GATGGAATCGGCGACGGCGG+CGG | - | chr7.2:15867828-15867847 | None:intergenic | 70.0% | |
| TCGCGGCACGAGCCCAACCA+CGG | - | chr7.2:15868954-15868973 | None:intergenic | 70.0% | |
| !! | CGGAGTCGGGGGTGATGGAG+GGG | - | chr7.2:15867808-15867827 | None:intergenic | 70.0% |
| !! | GCGGAGTCGGGGGTGATGGA+GGG | - | chr7.2:15867809-15867828 | None:intergenic | 70.0% |
| !! | GGAGTCGGGGGTGATGGAGG+GGG | - | chr7.2:15867807-15867826 | None:intergenic | 70.0% |
| ATCGGCGACGGCGGCGGAGT+CGG | - | chr7.2:15867822-15867841 | None:intergenic | 75.0% | |
| ! | GGCGGAGTCGGGGGTGATGG+AGG | - | chr7.2:15867810-15867829 | None:intergenic | 75.0% |
| ! | GGCGGCGGAGTCGGGGGTGA+TGG | - | chr7.2:15867813-15867832 | None:intergenic | 80.0% |
| ! | TCGGCGACGGCGGCGGAGTC+GGG | - | chr7.2:15867821-15867840 | None:intergenic | 80.0% |
| ! | CGGCGACGGCGGCGGAGTCG+GGG | - | chr7.2:15867820-15867839 | None:intergenic | 85.0% |
| ! | GGCGACGGCGGCGGAGTCGG+GGG | - | chr7.2:15867819-15867838 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 15867638 | 15870252 | 15867638 | ID=MS.gene52682 |
| chr7.2 | mRNA | 15867638 | 15870252 | 15867638 | ID=MS.gene52682.t1;Parent=MS.gene52682 |
| chr7.2 | exon | 15867638 | 15869874 | 15867638 | ID=MS.gene52682.t1.exon1;Parent=MS.gene52682.t1 |
| chr7.2 | CDS | 15867638 | 15869874 | 15867638 | ID=cds.MS.gene52682.t1;Parent=MS.gene52682.t1 |
| chr7.2 | exon | 15869964 | 15870252 | 15869964 | ID=MS.gene52682.t1.exon2;Parent=MS.gene52682.t1 |
| chr7.2 | CDS | 15869964 | 15870252 | 15869964 | ID=cds.MS.gene52682.t1;Parent=MS.gene52682.t1 |
| Gene Sequence |
| Protein sequence |
