AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54189

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54189.t1 MTR_5g071520 96.360 467 17 0 1 467 59 525 0.0 941
MS.gene54189.t1 MTR_2g098790 70.968 465 126 1 1 465 58 513 0.0 705
MS.gene54189.t1 MTR_2g098540 71.828 465 122 1 1 465 51 506 0.0 702
MS.gene54189.t1 MTR_2g098540 71.828 465 122 1 1 465 7 462 0.0 702
MS.gene54189.t1 MTR_2g098520 69.462 465 133 1 1 465 54 509 0.0 681
MS.gene54189.t1 MTR_6g078450 68.387 465 138 1 1 465 56 511 0.0 668
MS.gene54189.t1 MTR_4g066580 68.387 465 138 1 1 465 59 514 0.0 663
MS.gene54189.t1 MTR_3g028720 67.957 465 140 1 1 465 58 513 0.0 660
MS.gene54189.t1 MTR_4g066590 66.738 466 146 1 1 466 53 509 0.0 653
MS.gene54189.t1 MTR_4g066240 65.591 465 151 1 1 465 56 511 0.0 648
MS.gene54189.t1 MTR_4g066630 66.379 464 147 1 1 464 59 513 0.0 648
MS.gene54189.t1 MTR_6g078330 66.022 465 149 1 1 465 57 512 0.0 644
MS.gene54189.t1 MTR_4g066240 65.451 466 151 2 1 465 56 512 0.0 643
MS.gene54189.t1 MTR_6g078380 66.309 466 147 2 1 465 56 512 0.0 635
MS.gene54189.t1 MTR_4g066210 63.656 465 160 1 1 465 63 518 0.0 629
MS.gene54189.t1 MTR_4g066340 66.143 446 141 2 21 465 2 438 0.0 620
MS.gene54189.t1 MTR_4g066330 63.383 467 134 3 1 465 61 492 0.0 613
MS.gene54189.t1 MTR_4g066640 62.446 466 162 3 1 465 59 512 0.0 610
MS.gene54189.t1 MTR_4g066280 61.884 467 141 3 1 465 61 492 0.0 605
MS.gene54189.t1 MTR_3g026280 61.373 466 162 4 1 464 42 491 0.0 588
MS.gene54189.t1 MTR_6g078450 68.370 411 121 1 1 411 56 457 0.0 587
MS.gene54189.t1 MTR_3g028720 66.910 411 127 1 1 411 58 459 0.0 573
MS.gene54189.t1 MTR_6g078330 65.228 417 136 1 49 465 1 408 0.0 571
MS.gene54189.t1 MTR_4g023000 59.785 465 172 4 1 465 44 493 0.0 569
MS.gene54189.t1 MTR_4g066630 64.390 410 137 1 1 410 59 459 0.0 556
MS.gene54189.t1 MTR_6g078330 63.457 405 137 2 61 465 15 408 0.0 538
MS.gene54189.t1 MTR_3g028720 68.267 375 110 1 1 375 58 423 0.0 536
MS.gene54189.t1 MTR_4g066580 68.267 375 110 1 1 375 59 424 0.0 536
MS.gene54189.t1 MTR_4g066630 65.600 375 120 1 1 375 59 424 0.0 521
MS.gene54189.t1 MTR_4g015420 54.037 483 161 8 1 465 85 524 0.0 516
MS.gene54189.t1 MTR_4g066240 64.267 375 125 1 1 375 56 421 0.0 515
MS.gene54189.t1 MTR_4g067040 66.116 363 114 1 1 363 54 407 1.46e-178 506
MS.gene54189.t1 MTR_2g043200 55.626 471 166 7 1 465 85 518 5.17e-176 504
MS.gene54189.t1 MTR_4g083000 53.518 469 200 6 1 465 48 502 1.68e-175 502
MS.gene54189.t1 MTR_3g026400 52.700 463 206 4 2 464 27 476 1.12e-174 499
MS.gene54189.t1 MTR_3g026400 52.700 463 206 4 2 464 58 507 2.06e-174 499
MS.gene54189.t1 MTR_3g026620 52.916 463 205 4 2 464 59 508 1.21e-173 498
MS.gene54189.t1 MTR_3g028720 68.639 338 97 1 1 338 58 386 2.64e-171 487
MS.gene54189.t1 MTR_4g067040 68.047 338 99 1 1 338 54 382 9.19e-171 485
MS.gene54189.t1 MTR_4g015460 53.361 476 174 10 1 465 62 500 4.16e-168 483
MS.gene54189.t1 MTR_5g044000 51.282 468 211 7 1 464 66 520 2.90e-165 476
MS.gene54189.t1 MTR_4g066630 65.964 332 104 1 1 332 59 381 6.91e-163 465
MS.gene54189.t1 MTR_6g078330 65.432 324 103 1 1 324 57 371 2.04e-157 451
MS.gene54189.t1 MTR_4g081530 48.932 468 224 5 1 465 44 499 4.22e-157 455
MS.gene54189.t1 MTR_0110s0040 49.244 463 219 6 2 464 64 510 1.46e-156 454
MS.gene54189.t1 MTR_4g066640 61.516 343 119 3 1 342 59 389 1.47e-155 447
MS.gene54189.t1 MTR_3g033810 48.608 467 212 8 2 465 42 483 2.36e-153 445
MS.gene54189.t1 MTR_4g083000 53.207 421 180 5 49 465 1 408 3.19e-153 442
MS.gene54189.t1 MTR_0110s0030 47.948 463 225 6 2 464 64 510 2.43e-152 443
MS.gene54189.t1 MTR_4g131810 46.467 467 236 5 1 464 48 503 8.89e-151 439
MS.gene54189.t1 MTR_3g033790 46.552 464 225 6 2 465 40 480 1.68e-147 430
MS.gene54189.t1 MTR_2g022760 47.447 470 225 6 1 464 56 509 5.60e-147 430
MS.gene54189.t1 MTR_2g079580 44.397 473 231 7 2 464 53 503 1.05e-138 409
MS.gene54189.t1 MTR_4g131800 46.681 467 234 7 1 465 536 989 2.87e-138 423
MS.gene54189.t1 MTR_2g079550 44.397 473 231 7 2 464 51 501 3.61e-138 407
MS.gene54189.t1 MTR_7g068910 45.610 467 229 7 1 465 51 494 2.25e-137 405
MS.gene54189.t1 MTR_2g022710 43.348 466 249 6 1 464 55 507 3.39e-136 402
MS.gene54189.t1 MTR_7g068910 44.654 477 229 8 1 465 51 504 3.84e-134 397
MS.gene54189.t1 MTR_7g033860 44.111 467 237 5 2 466 69 513 9.07e-134 396
MS.gene54189.t1 MTR_4g016920 43.737 471 228 8 2 464 48 489 3.99e-131 389
MS.gene54189.t1 MTR_5g068740 43.617 470 231 10 2 465 48 489 1.43e-128 382
MS.gene54189.t1 MTR_1g088610 44.304 474 225 10 2 467 48 490 1.85e-126 381
MS.gene54189.t1 MTR_1g088610 38.462 117 65 3 350 465 503 613 1.55e-15 79.7
MS.gene54189.t1 MTR_2g022760 46.445 422 204 6 49 464 1 406 6.00e-126 372
MS.gene54189.t1 MTR_0108s0030 40.860 465 237 4 2 466 24 450 2.84e-124 369
MS.gene54189.t1 MTR_3g026400 54.232 319 134 3 2 320 58 364 4.24e-121 358
MS.gene54189.t1 MTR_7g068900 43.735 423 217 5 44 465 17 419 3.31e-118 355
MS.gene54189.t1 MTR_2g022710 42.105 418 228 5 49 464 1 406 1.01e-117 352
MS.gene54189.t1 MTR_4g016920 43.160 424 205 7 49 464 1 396 1.53e-114 343
MS.gene54189.t1 MTR_2g022710 41.889 413 226 5 1 411 55 455 6.31e-113 341
MS.gene54189.t1 MTR_1g088630 40.685 467 224 9 2 465 16 432 1.01e-112 340
MS.gene54189.t1 MTR_2g022710 41.889 413 226 5 1 411 55 455 1.11e-112 340
MS.gene54189.t1 MTR_2g079580 45.312 384 179 6 2 375 53 415 7.21e-112 336
MS.gene54189.t1 MTR_7g051610 41.810 464 241 6 2 464 96 531 1.17e-111 340
MS.gene54189.t1 MTR_7g051510 41.595 464 242 7 2 464 96 531 1.10e-110 337
MS.gene54189.t1 MTR_7g051650 41.702 470 234 10 2 464 96 532 3.70e-110 336
MS.gene54189.t1 MTR_7g051650 41.542 467 235 10 2 464 96 528 1.47e-109 334
MS.gene54189.t1 MTR_2g022710 43.501 377 199 5 1 375 55 419 3.05e-108 327
MS.gene54189.t1 MTR_0110s0040 49.068 322 151 4 2 323 64 372 1.55e-106 322
MS.gene54189.t1 MTR_2g022710 43.014 365 194 5 1 363 55 407 1.93e-102 312
MS.gene54189.t1 MTR_7g056747 40.898 423 215 5 43 464 9 397 1.36e-99 305
MS.gene54189.t1 MTR_2g022710 46.129 310 155 4 1 310 55 352 6.41e-96 296
MS.gene54189.t1 MTR_4g016920 49.645 282 130 3 49 329 1 271 2.38e-91 280
MS.gene54189.t1 MTR_1g088630 44.377 329 143 6 2 328 48 338 3.36e-88 274
MS.gene54189.t1 MTR_1g088630 48.592 284 119 6 2 284 48 305 6.05e-83 258
MS.gene54189.t1 MTR_0110s0020 50.467 214 102 3 2 215 64 273 5.09e-71 228
MS.gene54189.t1 MTR_5g069350 63.218 174 23 5 304 467 48 190 5.98e-59 192
MS.gene54189.t1 MTR_4g122980 25.349 430 235 13 45 466 183 534 1.86e-28 119
MS.gene54189.t1 MTR_8g038650 45.055 91 50 0 221 311 62 152 6.59e-22 92.4
MS.gene54189.t1 MTR_4g061170 53.125 64 22 2 390 451 7 64 3.36e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54189.t1 AT5G42260 55.435 460 190 5 2 460 52 497 0.0 528
MS.gene54189.t1 AT5G44640 54.310 464 197 5 2 464 52 501 0.0 528
MS.gene54189.t1 AT2G44450 54.428 463 197 3 2 464 52 500 0.0 527
MS.gene54189.t1 AT2G44480 53.780 463 204 2 2 464 56 508 0.0 523
MS.gene54189.t1 AT2G44480 53.780 463 204 2 2 464 87 539 0.0 523
MS.gene54189.t1 AT3G60130 54.624 465 196 4 2 465 51 501 0.0 518
MS.gene54189.t1 AT5G24550 52.665 469 208 6 1 465 52 510 1.48e-179 513
MS.gene54189.t1 AT2G25630 51.940 464 191 5 2 464 51 483 7.98e-173 494
MS.gene54189.t1 AT3G60140 50.427 468 219 5 1 465 46 503 2.47e-172 496
MS.gene54189.t1 AT5G24540 53.305 469 205 6 1 465 52 510 1.59e-171 493
MS.gene54189.t1 AT1G26560 51.173 469 214 6 1 466 52 508 2.09e-166 479
MS.gene54189.t1 AT1G51470 51.940 464 202 6 2 464 66 509 3.61e-166 478
MS.gene54189.t1 AT1G47600 51.606 467 199 7 2 464 66 509 8.08e-166 478
MS.gene54189.t1 AT1G47600 51.178 467 200 7 2 464 66 508 6.19e-165 475
MS.gene54189.t1 AT5G54570 49.893 467 220 4 1 464 50 505 1.33e-164 475
MS.gene54189.t1 AT2G44470 48.712 466 226 5 2 464 50 505 3.60e-164 476
MS.gene54189.t1 AT2G44480 52.885 416 186 2 49 464 1 406 6.98e-163 466
MS.gene54189.t1 AT3G60130 54.009 424 180 4 43 465 40 449 4.77e-162 466
MS.gene54189.t1 AT2G44460 50.535 467 217 5 1 464 49 504 2.30e-159 464
MS.gene54189.t1 AT3G18080 49.247 465 219 7 2 465 60 508 1.46e-156 454
MS.gene54189.t1 AT3G60130 52.594 424 175 5 43 465 40 438 2.01e-154 446
MS.gene54189.t1 AT2G44490 45.957 470 239 5 1 465 34 493 2.44e-154 450
MS.gene54189.t1 AT3G60120 49.045 471 220 7 1 465 34 490 3.09e-154 449
MS.gene54189.t1 AT3G18070 48.069 466 215 9 2 465 51 491 2.96e-151 440
MS.gene54189.t1 AT3G03640 47.034 472 235 4 1 467 54 515 6.57e-151 440
MS.gene54189.t1 AT3G18070 48.069 466 221 9 2 465 51 497 2.70e-150 437
MS.gene54189.t1 AT5G25980 48.156 461 223 7 9 465 75 523 8.12e-150 438
MS.gene54189.t1 AT5G36890 47.957 465 220 5 2 465 37 480 1.40e-149 435
MS.gene54189.t1 AT5G36890 47.957 465 220 5 2 465 37 480 2.85e-149 434
MS.gene54189.t1 AT2G32860 46.581 468 238 4 2 466 115 573 1.74e-146 432
MS.gene54189.t1 AT2G32860 46.467 467 239 4 2 466 115 572 1.94e-146 432
MS.gene54189.t1 AT5G24540 51.816 413 186 5 1 410 52 454 9.28e-145 422
MS.gene54189.t1 AT3G09260 46.137 466 237 5 2 464 56 510 1.15e-142 419
MS.gene54189.t1 AT5G54570 49.165 419 199 4 49 464 1 408 1.40e-142 416
MS.gene54189.t1 AT1G61820 46.154 468 237 6 1 465 50 505 2.93e-142 417
MS.gene54189.t1 AT5G26000 47.516 463 222 9 9 464 63 511 3.04e-141 416
MS.gene54189.t1 AT5G54570 48.426 413 200 3 1 411 50 451 2.75e-140 410
MS.gene54189.t1 AT2G44470 47.202 411 205 4 2 410 50 450 1.53e-139 408
MS.gene54189.t1 AT2G44450 53.168 363 156 3 102 464 1 349 4.35e-139 404
MS.gene54189.t1 AT3G21370 45.435 471 238 7 2 465 54 512 9.63e-138 406
MS.gene54189.t1 AT1G75940 45.895 475 230 9 2 464 58 517 4.04e-137 405
MS.gene54189.t1 AT4G27830 44.754 467 230 7 1 464 43 484 1.29e-136 403
MS.gene54189.t1 AT3G60140 49.867 377 177 4 1 375 46 412 2.60e-136 400
MS.gene54189.t1 AT1G52400 45.223 471 237 9 2 465 60 516 3.56e-136 402
MS.gene54189.t1 AT1G52400 45.223 471 237 9 2 465 60 516 3.56e-136 402
MS.gene54189.t1 AT1G02850 44.850 466 229 7 2 465 47 486 1.08e-135 400
MS.gene54189.t1 AT1G02850 44.491 481 232 8 2 465 47 509 1.85e-135 400
MS.gene54189.t1 AT1G66280 46.253 467 234 6 2 464 57 510 2.87e-135 400
MS.gene54189.t1 AT1G66270 46.039 467 235 6 2 464 57 510 7.69e-135 399
MS.gene54189.t1 AT1G61810 44.444 468 245 6 1 465 53 508 8.80e-135 399
MS.gene54189.t1 AT1G02850 44.813 482 230 9 2 465 47 510 1.67e-134 398
MS.gene54189.t1 AT5G28510 44.068 472 243 7 2 464 60 519 1.53e-133 396
MS.gene54189.t1 AT1G66270 45.610 467 235 7 2 464 57 508 2.45e-131 390
MS.gene54189.t1 AT4G21760 43.590 468 240 8 1 464 74 521 4.07e-131 390
MS.gene54189.t1 AT5G25980 47.654 405 198 5 9 411 75 467 6.51e-131 387
MS.gene54189.t1 AT5G25980 47.654 405 198 5 9 411 75 467 6.51e-131 387
MS.gene54189.t1 AT1G61810 44.493 454 237 6 1 451 53 494 1.97e-129 386
MS.gene54189.t1 AT4G27820 43.469 467 234 7 1 464 43 482 1.53e-128 382
MS.gene54189.t1 AT4G21760 43.534 464 236 8 1 464 74 511 3.56e-128 382
MS.gene54189.t1 AT4G22100 43.923 469 232 10 1 465 42 483 1.31e-126 377
MS.gene54189.t1 AT1G60090 43.284 469 233 9 1 465 44 483 2.24e-125 374
MS.gene54189.t1 AT1G02850 42.704 466 212 7 2 465 47 459 4.07e-124 370
MS.gene54189.t1 AT1G60090 42.227 476 235 9 1 465 44 490 1.82e-122 367
MS.gene54189.t1 AT1G45191 42.431 469 239 9 1 465 49 490 6.05e-122 365
MS.gene54189.t1 AT5G26000 46.814 408 198 7 9 411 63 456 8.69e-122 363
MS.gene54189.t1 AT3G62750 41.791 469 230 8 1 464 43 473 1.40e-120 362
MS.gene54189.t1 AT3G62750 41.791 469 230 8 1 464 69 499 2.61e-120 362
MS.gene54189.t1 AT1G45191 42.644 469 243 8 1 465 49 495 5.50e-120 361
MS.gene54189.t1 AT1G45191 42.463 471 230 10 1 465 49 484 2.61e-119 358
MS.gene54189.t1 AT4G27830 44.153 419 208 6 49 464 1 396 2.08e-118 353
MS.gene54189.t1 AT1G45191 42.171 479 243 9 1 465 49 507 2.11e-118 357
MS.gene54189.t1 AT2G44480 57.292 288 113 2 2 289 87 364 1.52e-117 350
MS.gene54189.t1 AT2G44470 49.226 323 153 3 2 323 50 362 7.55e-117 348
MS.gene54189.t1 AT1G61810 44.048 420 220 6 49 465 1 408 1.17e-116 349
MS.gene54189.t1 AT3G62740 40.385 468 243 9 1 464 43 478 2.71e-114 345
MS.gene54189.t1 AT2G44460 49.728 368 172 4 100 464 1 358 2.81e-114 343
MS.gene54189.t1 AT1G02850 45.641 390 184 6 2 375 47 424 1.50e-112 339
MS.gene54189.t1 AT4G27820 42.482 419 216 6 49 464 1 397 3.29e-110 332
MS.gene54189.t1 AT4G27820 42.482 419 216 6 49 464 1 397 3.29e-110 332
MS.gene54189.t1 AT1G52400 43.855 415 213 8 2 410 60 460 5.53e-110 333
MS.gene54189.t1 AT5G48375 42.558 430 172 9 7 429 50 411 1.50e-108 329
MS.gene54189.t1 AT3G18070 48.512 336 157 6 132 465 99 420 3.70e-107 325
MS.gene54189.t1 AT1G61810 43.122 378 201 5 1 375 53 419 1.51e-104 318
MS.gene54189.t1 AT1G61820 44.385 374 194 5 95 465 4 366 4.75e-104 315
MS.gene54189.t1 AT3G62750 41.247 417 203 7 1 413 69 447 7.50e-104 317
MS.gene54189.t1 AT3G62750 40.618 421 212 7 49 464 1 388 1.30e-102 313
MS.gene54189.t1 AT3G62750 40.618 421 212 7 49 464 1 388 1.30e-102 313
MS.gene54189.t1 AT2G44480 48.208 307 149 2 158 464 6 302 2.09e-102 308
MS.gene54189.t1 AT3G18070 48.137 322 151 6 146 465 1 308 2.73e-101 306
MS.gene54189.t1 AT3G62740 40.678 413 210 8 1 410 43 423 1.72e-100 308
MS.gene54189.t1 AT1G51490 46.647 343 159 7 2 342 41 361 5.13e-99 303
MS.gene54189.t1 AT3G18070 47.619 315 149 6 2 316 51 349 2.26e-98 301
MS.gene54189.t1 AT1G45191 43.562 365 183 7 1 360 49 395 1.00e-96 297
MS.gene54189.t1 AT1G60270 47.742 310 146 4 1 310 44 337 4.23e-96 295
MS.gene54189.t1 AT1G45191 47.239 326 151 6 1 323 49 356 2.87e-95 294
MS.gene54189.t1 AT3G62750 45.659 311 144 4 1 311 43 328 2.84e-93 287
MS.gene54189.t1 AT3G62750 45.659 311 144 4 1 311 43 328 2.84e-93 287
MS.gene54189.t1 AT3G62750 45.659 311 144 4 1 311 69 354 2.95e-92 287
MS.gene54189.t1 AT1G61810 48.473 262 124 3 1 262 53 303 3.97e-83 259
MS.gene54189.t1 AT1G60270 48.092 262 124 3 49 310 1 250 2.26e-79 249
MS.gene54189.t1 AT3G18070 45.385 260 129 4 122 379 89 337 4.20e-73 234
MS.gene54189.t1 AT3G18070 45.763 236 115 4 146 379 1 225 1.86e-67 216
MS.gene54189.t1 AT5G16580 38.127 299 155 7 127 421 27 299 9.15e-54 182
MS.gene54189.t1 AT3G06510 24.476 429 242 14 44 466 159 511 1.28e-27 116
MS.gene54189.t1 AT3G06510 24.434 442 260 14 44 466 159 545 2.86e-27 115

Find 98 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTTTGCTTCAAGGAATT+TGG 0.175350 5.4:-62434029 MS.gene54189:CDS
GTGATTTATGTTACCGAAAA+TGG 0.182534 5.4:-62430424 MS.gene54189:intron
GTTTGTTCTTCATAGAAATT+TGG 0.195177 5.4:+62430880 None:intergenic
TCGGATTTGCTATTTGAAAA+TGG 0.225126 5.4:+62431360 None:intergenic
GGTATAGTAGTGTTTAAATT+AGG 0.291027 5.4:+62430787 None:intergenic
GAATAGCGTTACAATCTTAC+TGG 0.295505 5.4:-62431389 MS.gene54189:CDS
CATATCTTCAATCAGCAATT+AGG 0.314453 5.4:-62430209 MS.gene54189:intron
AGGATCGGCGTAAATGTAAA+AGG 0.343637 5.4:-62430091 MS.gene54189:CDS
GTGGCAAAGGAACAAGTATA+TGG 0.352894 5.4:-62435696 MS.gene54189:CDS
AGGTGATGTGCAACTAAATA+TGG 0.357699 5.4:+62433867 None:intergenic
AGTTTACAAGACAAAATATC+AGG 0.358750 5.4:-62433817 MS.gene54189:intron
CAACTGCACCAGTGGTGATT+CGG 0.360875 5.4:-62433898 MS.gene54189:CDS
TCTTTGTGACACTATTTCAT+TGG 0.365955 5.4:-62434357 MS.gene54189:CDS
GGCGTGTTTACTTGTAAGAT+TGG 0.385319 5.4:+62430741 None:intergenic
AACTGCACCAGTGGTGATTC+GGG 0.399396 5.4:-62433897 MS.gene54189:CDS
AACAGTTTCATAAATCCAAT+TGG 0.400089 5.4:+62430478 None:intergenic
CTTTGTGACACTATTTCATT+GGG 0.408201 5.4:-62434356 MS.gene54189:CDS
AAGCCAAACTACATCTCAAA+AGG 0.417236 5.4:-62431421 MS.gene54189:CDS
TGATGGAAGCTGAGCGTAAC+GGG 0.422414 5.4:-62430634 MS.gene54189:intron
GCCATTGGATGAAGCACTTA+AGG 0.423757 5.4:-62430268 MS.gene54189:CDS
CACCTGGTAGATGTTCTGAT+TGG 0.427255 5.4:-62433929 MS.gene54189:CDS
TTATGCGGAGCTTTGCTTCA+AGG 0.431389 5.4:-62434036 MS.gene54189:CDS
CAAGCCTTGGAAGATGAGTA+TGG 0.432317 5.4:-62434325 MS.gene54189:CDS
ATCTGCAGGCTGCTTCAGAT+TGG 0.449425 5.4:-62430513 MS.gene54189:intron
AGTGTTTAAATTAGGTGCAT+TGG 0.449618 5.4:+62430795 None:intergenic
GAAGGGTACACAGTGAGGTT+TGG 0.454487 5.4:-62430028 MS.gene54189:CDS
TTGGAGATAGAGTGAAGTAC+TGG 0.459700 5.4:-62434010 MS.gene54189:CDS
AAATGATCCAACACTGCCAT+TGG 0.467997 5.4:-62430283 MS.gene54189:CDS
TTGGGATCTACCACAAGCCT+TGG 0.469228 5.4:-62434338 MS.gene54189:CDS
TCGTTCTGCAGCTCTTTCAT+CGG 0.469821 5.4:+62431341 None:intergenic
ATCAACGAGCTAATAGCTAA+TGG 0.475339 5.4:-62434471 MS.gene54189:intron
AAAAGAACCGTTGAGTAGCC+TGG 0.477296 5.4:+62430858 None:intergenic
TTTATGACACCATTGACAAC+GGG 0.481807 5.4:-62430946 MS.gene54189:CDS
CTCTGTCCCCGAATCACCAC+TGG 0.481918 5.4:+62433890 None:intergenic
CGAGCAATTGACTTCATGCT+TGG 0.483028 5.4:-62431321 MS.gene54189:CDS
AAACTACATCTCAAAAGGGT+TGG 0.501705 5.4:-62431416 MS.gene54189:CDS
CAATTGACTTCATGCTTGGA+TGG 0.502651 5.4:-62431317 MS.gene54189:intron
AATTGGATTTATGAAACTGT+TGG 0.508886 5.4:-62430476 MS.gene54189:CDS
AATGGAGATGTCTCTATTGA+CGG 0.510615 5.4:-62434927 MS.gene54189:CDS
AAGCACTTAAGGACATTGAC+AGG 0.512346 5.4:-62430257 MS.gene54189:CDS
ACATCTCAAAAGGGTTGGAT+AGG 0.516519 5.4:-62431411 MS.gene54189:CDS
ACCTGGATATTTGTGAGTAA+AGG 0.518207 5.4:+62435669 None:intergenic
ATATCCACCTGTGCAGTAAG+TGG 0.518356 5.4:+62433968 None:intergenic
TCCACAGCATATGCGATCCT+TGG 0.521221 5.4:-62430917 MS.gene54189:CDS
GCTTCATCCAATGGCAGTGT+TGG 0.523292 5.4:+62430276 None:intergenic
GAAACTGTTGGTCTACATCA+AGG 0.528541 5.4:-62430464 MS.gene54189:CDS
AGCCAAACTACATCTCAAAA+GGG 0.528542 5.4:-62431420 MS.gene54189:CDS
CGGGATACCCATCGGTCCAC+AGG 0.528693 5.4:-62430615 MS.gene54189:intron
TCCTTAAGTGCTTCATCCAA+TGG 0.530336 5.4:+62430267 None:intergenic
AAAATAATCGACAGAAGCAA+TGG 0.531000 5.4:-62434945 MS.gene54189:CDS
TGGCAAAGGAACAAGTATAT+GGG 0.535012 5.4:-62435695 MS.gene54189:CDS
ACCTTTACTCACAAATATCC+AGG 0.535242 5.4:-62435670 MS.gene54189:intron
TGTACGTACCTGTGGACCGA+TGG 0.536172 5.4:+62430607 None:intergenic
AATCACCACTGGTGCAGTTG+AGG 0.540994 5.4:+62433901 None:intergenic
GGATAGTCTCCCGTTGTCAA+TGG 0.543914 5.4:+62430937 None:intergenic
TTTACTTGTAAGATTGGCAA+GGG 0.545503 5.4:+62430747 None:intergenic
CAGCTGCATGAGCAAGGAGT+AGG 0.545859 5.4:+62433847 None:intergenic
AGTGAAGGCATTAATCAAGA+AGG 0.546336 5.4:-62434516 MS.gene54189:CDS
TGCCAATCAGAACATCTACC+AGG 0.549985 5.4:+62433927 None:intergenic
ATGGAGATGTCTCTATTGAC+GGG 0.561237 5.4:-62434926 MS.gene54189:CDS
CATACAGATTATCCATCTCA+TGG 0.567022 5.4:-62434681 MS.gene54189:CDS
ACAGTACGAAGGTGCTGCAA+AGG 0.568443 5.4:-62435722 None:intergenic
GTGAAGGCATTAATCAAGAA+GGG 0.572932 5.4:-62434515 MS.gene54189:CDS
GTACGTACCTGTGGACCGAT+GGG 0.575340 5.4:+62430608 None:intergenic
GAGCCATCCACTTACTGCAC+AGG 0.576206 5.4:-62433975 MS.gene54189:CDS
GAACAGCAGCTGCATGAGCA+AGG 0.577925 5.4:+62433841 None:intergenic
CCATCCACTTACTGCACAGG+TGG 0.578054 5.4:-62433972 MS.gene54189:CDS
AGGGAATCTGTGAGATAGCA+AGG 0.579096 5.4:+62430766 None:intergenic
CAGCATATGCGATCCTTGGT+TGG 0.580100 5.4:-62430913 MS.gene54189:CDS
CCACCTGTGCAGTAAGTGGA+TGG 0.584090 5.4:+62433972 None:intergenic
TCTCTATTGACGGGTATCAT+CGG 0.585792 5.4:-62434917 MS.gene54189:CDS
AAACTATATTCACAGATGGA+AGG 0.587869 5.4:-62434542 MS.gene54189:intron
GTTTACTTGTAAGATTGGCA+AGG 0.591321 5.4:+62430746 None:intergenic
TACTCATCTTCCAAGGCTTG+TGG 0.591984 5.4:+62434328 None:intergenic
TACGAAGGTGCTGCAAAGGA+AGG 0.593383 5.4:-62435718 MS.gene54189:CDS
CAAAACCTCAACTGCACCAG+TGG 0.594481 5.4:-62433906 MS.gene54189:CDS
GCTGCAAAGGAAGGTGGCAA+AGG 0.596234 5.4:-62435709 MS.gene54189:CDS
ACCAAGGATCGCATATGCTG+TGG 0.604539 5.4:+62430916 None:intergenic
TGGCAATCGTTGTCCAACCA+AGG 0.606391 5.4:+62430900 None:intergenic
TGACGGGTATCATCGGTACA+AGG 0.609706 5.4:-62434910 MS.gene54189:intron
GTTTATGACACCATTGACAA+CGG 0.621613 5.4:-62430947 MS.gene54189:CDS
GAGCGTAACGGGATACCCAT+CGG 0.623116 5.4:-62430623 MS.gene54189:CDS
ACCTCCATACTCATCTTCCA+AGG 0.624004 5.4:+62434321 None:intergenic
TAGTATTCTAGACCATGAGA+TGG 0.627823 5.4:+62434669 None:intergenic
ACTGCACCAGTGGTGATTCG+GGG 0.635308 5.4:-62433896 MS.gene54189:CDS
GTGATGGAAGCTGAGCGTAA+CGG 0.637510 5.4:-62430635 MS.gene54189:intron
CTGATTGAAGATATGAGAGA+TGG 0.643010 5.4:+62430217 None:intergenic
ATCAAAAGCTCTCAGCACAA+TGG 0.644647 5.4:-62429967 MS.gene54189:CDS
GAAGGTGCTGCAAAGGAAGG+TGG 0.645017 5.4:-62435715 MS.gene54189:CDS
ACAGATGGAAGGATAAGTGA+AGG 0.645708 5.4:-62434531 MS.gene54189:intron
GAACAAACCAGGCTACTCAA+CGG 0.670966 5.4:-62430865 MS.gene54189:CDS
ATTTCTATGAAGAACAAACC+AGG 0.671675 5.4:-62430876 MS.gene54189:CDS
GGGGTGAAGGGTACACAGTG+AGG 0.672260 5.4:-62430033 MS.gene54189:CDS
GTTAATGCGATATTTCCACC+TGG 0.681081 5.4:-62433945 MS.gene54189:CDS
TTATAATAAATACAGTACGA+AGG 0.705773 5.4:-62435733 None:intergenic
ATCGTCGCTTACACTATGCG+AGG 0.707258 5.4:+62434289 None:intergenic
GCCTTGGAAGATGAGTATGG+AGG 0.722664 5.4:-62434322 MS.gene54189:CDS
CAATCAGAACATCTACCAGG+TGG 0.737629 5.4:+62433930 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAGAAAAAACAAA+TGG - chr5.4:62434425-62434444 MS.gene54189:intron 10.0%
!!! AATGTGTTAATTATTTTTTT+AGG - chr5.4:62430397-62430416 MS.gene54189:intron 10.0%
!!! ACATTATTTATTTTGAATTA+AGG + chr5.4:62430382-62430401 None:intergenic 10.0%
!!! ATGTGTTAATTATTTTTTTA+GGG - chr5.4:62430398-62430417 MS.gene54189:intron 10.0%
!!! TAATACTTTCTATTTTATTT+TGG - chr5.4:62435527-62435546 MS.gene54189:intron 10.0%
!!! TAATTTTTTTTGATTAAATG+TGG + chr5.4:62431091-62431110 None:intergenic 10.0%
!!! TGTTTTAATTATTGTAATTT+CGG + chr5.4:62430181-62430200 None:intergenic 10.0%
!! AAATTATGAATCATTGTTAA+TGG - chr5.4:62434490-62434509 MS.gene54189:CDS 15.0%
!! AAGTTCATAATTTCATATAT+AGG + chr5.4:62434390-62434409 None:intergenic 15.0%
!! AATATCAGTTTAAAAATTGT+AGG - chr5.4:62431970-62431989 MS.gene54189:intron 15.0%
!! AGTTCATAATTTCATATATA+GGG + chr5.4:62434389-62434408 None:intergenic 15.0%
!! TTAATTTAAAAGCTTTCTAA+AGG + chr5.4:62430034-62430053 None:intergenic 15.0%
!! TTCAAAATACATATACTATA+AGG - chr5.4:62430618-62430637 MS.gene54189:CDS 15.0%
!!! AAAAAGTTTATAGATGTTTT+TGG - chr5.4:62430335-62430354 MS.gene54189:intron 15.0%
!!! ATAGAAAATTTGTTTTATAC+AGG - chr5.4:62430918-62430937 MS.gene54189:CDS 15.0%
!!! GTTTACTTTTTATTTGAAAA+GGG + chr5.4:62432875-62432894 None:intergenic 15.0%
!!! GTTTTAATTATTGTAATTTC+GGG + chr5.4:62430180-62430199 None:intergenic 15.0%
!!! TTATAGTATATGTATTTTGA+AGG + chr5.4:62430619-62430638 None:intergenic 15.0%
!! AATAAAACTATATTCACAGA+TGG - chr5.4:62431112-62431131 MS.gene54189:intron 20.0%
!! AATTCTTATTGCCATATATA+TGG - chr5.4:62433508-62433527 MS.gene54189:intron 20.0%
!! ATGATATAAGTGATGAATAA+AGG + chr5.4:62434941-62434960 None:intergenic 20.0%
!! CATAACTTACATTTAATCAA+TGG - chr5.4:62430674-62430693 MS.gene54189:intron 20.0%
!! GTAGATCAAAATAAAATCAA+TGG + chr5.4:62434555-62434574 None:intergenic 20.0%
!!! AACTTTTAGAAATGATTTTC+GGG - chr5.4:62431598-62431617 MS.gene54189:intron 20.0%
!!! GAACTTTTAGAAATGATTTT+CGG - chr5.4:62431597-62431616 MS.gene54189:intron 20.0%
!!! GGTTTACTTTTTATTTGAAA+AGG + chr5.4:62432876-62432895 None:intergenic 20.0%
!!! TCTCAAACAAATTTTACTTT+AGG - chr5.4:62430833-62430852 MS.gene54189:CDS 20.0%
!!! TGAAAAATTATTAGTTTTGC+AGG - chr5.4:62431270-62431289 MS.gene54189:intron 20.0%
!!! TTGTTGTAATTTACCATTTT+CGG + chr5.4:62435250-62435269 None:intergenic 20.0%
! AAAATCAATGGAAGAAATAG+AGG + chr5.4:62434543-62434562 None:intergenic 25.0%
! AAATCAATGGAAGAAATAGA+GGG + chr5.4:62434542-62434561 None:intergenic 25.0%
! AACAGTTTCATAAATCCAAT+TGG + chr5.4:62435183-62435202 None:intergenic 25.0%
! AAGAACAATCTTCTTAGTAT+CGG + chr5.4:62433343-62433362 None:intergenic 25.0%
! AATTGGATTTATGAAACTGT+TGG - chr5.4:62435182-62435201 MS.gene54189:intron 25.0%
! ACAGTTTATAAACAAATGGT+TGG + chr5.4:62432043-62432062 None:intergenic 25.0%
! AGTTTACAAGACAAAATATC+AGG - chr5.4:62431841-62431860 MS.gene54189:intron 25.0%
! CAGTTTAAAAATTGTAGGTA+AGG - chr5.4:62431975-62431994 MS.gene54189:intron 25.0%
! GGTATAGTAGTGTTTAAATT+AGG + chr5.4:62434874-62434893 None:intergenic 25.0%
! GTCTTACAAATTTCAAATGA+TGG + chr5.4:62432580-62432599 None:intergenic 25.0%
! GTTTGTTCTTCATAGAAATT+TGG + chr5.4:62434781-62434800 None:intergenic 25.0%
! TAGGAAATTATCAACTTACT+TGG + chr5.4:62431015-62431034 None:intergenic 25.0%
! TGTCACAGTTTATAAACAAA+TGG + chr5.4:62432047-62432066 None:intergenic 25.0%
! TGTGTCTATATACATAAGTT+TGG + chr5.4:62431913-62431932 None:intergenic 25.0%
! TTATGAATCATTGTTAATGG+TGG - chr5.4:62434493-62434512 MS.gene54189:CDS 25.0%
! TTTGTGAATATACAAAGGAT+CGG - chr5.4:62435552-62435571 MS.gene54189:intron 25.0%
!! ATGTAAAAGGATATTTTGCA+TGG - chr5.4:62435580-62435599 MS.gene54189:intron 25.0%
!! TGGTTTTTGTGAATATACAA+AGG - chr5.4:62435547-62435566 MS.gene54189:intron 25.0%
!!! AACGGTTCTTTTGATTTTAT+CGG - chr5.4:62434811-62434830 MS.gene54189:intron 25.0%
!!! AAGGTTTAATTCTAGTTTGA+AGG + chr5.4:62430363-62430382 None:intergenic 25.0%
!!! ATGAATATGTGAACTTGTTT+TGG - chr5.4:62435308-62435327 MS.gene54189:intron 25.0%
!!! CAAATGAAGTTTTATCTTTC+TGG - chr5.4:62435087-62435106 MS.gene54189:intron 25.0%
!!! CTAATTAGAAGTATCAAGAA+TGG + chr5.4:62434012-62434031 None:intergenic 25.0%
!!! TGGTTTTATAGTTATCCAAT+TGG - chr5.4:62435165-62435184 MS.gene54189:intron 25.0%
AAAAGAGGGTTAAGATGAAA+AGG - chr5.4:62434046-62434065 MS.gene54189:CDS 30.0%
AAAATAATCGACAGAAGCAA+TGG - chr5.4:62430713-62430732 MS.gene54189:intron 30.0%
AAACTATATTCACAGATGGA+AGG - chr5.4:62431116-62431135 MS.gene54189:intron 30.0%
AAGCTCAAACTCCATTTAAA+GGG - chr5.4:62433891-62433910 MS.gene54189:CDS 30.0%
AAGTCAAATCTTGCAGTTAT+GGG - chr5.4:62433746-62433765 MS.gene54189:intron 30.0%
AATAGATAGATAGAGATACC+TGG + chr5.4:62430009-62430028 None:intergenic 30.0%
AGAAGATTGTTCTTTAGATC+AGG - chr5.4:62433349-62433368 MS.gene54189:intron 30.0%
AGAGTTTAGTAATTGTGAGT+TGG + chr5.4:62432349-62432368 None:intergenic 30.0%
AGATAAAACTTCATTTGACG+TGG + chr5.4:62435084-62435103 None:intergenic 30.0%
AGCAGAAGTAGAAAAATACA+AGG + chr5.4:62432690-62432709 None:intergenic 30.0%
AGTGTTTAAATTAGGTGCAT+TGG + chr5.4:62434866-62434885 None:intergenic 30.0%
ATTTCTATGAAGAACAAACC+AGG - chr5.4:62434782-62434801 MS.gene54189:intron 30.0%
CAATCATGCTTGAATACAAT+GGG + chr5.4:62432949-62432968 None:intergenic 30.0%
CATATCTTCAATCAGCAATT+AGG - chr5.4:62435449-62435468 MS.gene54189:intron 30.0%
CTTTGTGACACTATTTCATT+GGG - chr5.4:62431302-62431321 MS.gene54189:intron 30.0%
GAGTTTAGTAATTGTGAGTT+GGG + chr5.4:62432348-62432367 None:intergenic 30.0%
GTGATTTATGTTACCGAAAA+TGG - chr5.4:62435234-62435253 MS.gene54189:intron 30.0%
TAAAACTCAGAGATCATTCT+AGG + chr5.4:62433452-62433471 None:intergenic 30.0%
TAAAGTTTCCCATCCAAAAA+GGG + chr5.4:62433272-62433291 None:intergenic 30.0%
TAACTGCATTGTTTAAGGAT+AGG + chr5.4:62431034-62431053 None:intergenic 30.0%
TATTGAAATGAAGGACACTT+TGG + chr5.4:62433568-62433587 None:intergenic 30.0%
TCAATTGAAATCTCAATTGC+AGG - chr5.4:62434689-62434708 MS.gene54189:CDS 30.0%
TCTTTGTGACACTATTTCAT+TGG - chr5.4:62431301-62431320 MS.gene54189:intron 30.0%
TGACTGTAGTAGAAAAATGT+AGG + chr5.4:62432897-62432916 None:intergenic 30.0%
TGAGATCTTAAACATTAGAC+TGG - chr5.4:62433219-62433238 MS.gene54189:intron 30.0%
TGTGGTTCATATTGAAATGA+AGG + chr5.4:62433577-62433596 None:intergenic 30.0%
TTCAATCAGCAATTAGGTAA+TGG - chr5.4:62435455-62435474 MS.gene54189:intron 30.0%
TTTACTTGTAAGATTGGCAA+GGG + chr5.4:62434914-62434933 None:intergenic 30.0%
! AAAGGGTATATACCTTTGAA+AGG + chr5.4:62432858-62432877 None:intergenic 30.0%
! AAGGGTATATACCTTTGAAA+GGG + chr5.4:62432857-62432876 None:intergenic 30.0%
! CTAGTATATCATTTTGTGCA+TGG - chr5.4:62431478-62431497 MS.gene54189:intron 30.0%
! CTTGATAACTGCATTGTTTA+AGG + chr5.4:62431039-62431058 None:intergenic 30.0%
! GTTTTATACAGGAAGATGTT+GGG - chr5.4:62430929-62430948 MS.gene54189:CDS 30.0%
! TATTCCCTCAAACTTTTGTT+GGG - chr5.4:62430537-62430556 MS.gene54189:intron 30.0%
! TGAATTATCAATCCCCTTTT+TGG - chr5.4:62433256-62433275 MS.gene54189:intron 30.0%
! TGTTTTATACAGGAAGATGT+TGG - chr5.4:62430928-62430947 MS.gene54189:CDS 30.0%
! TTACTTTAGGTTTCACTCAA+TGG - chr5.4:62430846-62430865 MS.gene54189:CDS 30.0%
! TTCTAAATTTTACGCCACAA+TGG - chr5.4:62431540-62431559 MS.gene54189:intron 30.0%
! TTTTCGGTAACATAAATCAC+TGG + chr5.4:62435234-62435253 None:intergenic 30.0%
!! AAATGATTTTCGGGATTATG+CGG - chr5.4:62431607-62431626 MS.gene54189:intron 30.0%
!! GAAATTTTTCAGCTCTCTTA+TGG + chr5.4:62434671-62434690 None:intergenic 30.0%
!! TCGGATTTGCTATTTGAAAA+TGG + chr5.4:62434301-62434320 None:intergenic 30.0%
!!! ACCTTTGAAAGGGTTTTATT+TGG + chr5.4:62432847-62432866 None:intergenic 30.0%
!!! AGCTCTCTTATTTTTTGTGA+TGG - chr5.4:62435007-62435026 MS.gene54189:intron 30.0%
!!! TCATCTTAACCCTCTTTTTT+CGG + chr5.4:62434044-62434063 None:intergenic 30.0%
AAACTACATCTCAAAAGGGT+TGG - chr5.4:62434242-62434261 MS.gene54189:intron 35.0%
AAAGTTTCCCATCCAAAAAG+GGG + chr5.4:62433271-62433290 None:intergenic 35.0%
AACACATAGAATCCTTTCCA+AGG + chr5.4:62433030-62433049 None:intergenic 35.0%
AAGGATATGTGGATTCAATG+AGG + chr5.4:62433963-62433982 None:intergenic 35.0%
AATGGAGATGTCTCTATTGA+CGG - chr5.4:62430731-62430750 MS.gene54189:intron 35.0%
ACCTGGATATTTGTGAGTAA+AGG + chr5.4:62429992-62430011 None:intergenic 35.0%
ACCTTTACTCACAAATATCC+AGG - chr5.4:62429988-62430007 MS.gene54189:CDS 35.0%
AGAAAGAGACTTTGACATGA+CGG + chr5.4:62432254-62432273 None:intergenic 35.0%
AGATGAAAATACATGCAGAG+AGG + chr5.4:62433808-62433827 None:intergenic 35.0%
AGCCAAACTACATCTCAAAA+GGG - chr5.4:62434238-62434257 MS.gene54189:intron 35.0%
AGGCTTAGAAGGTTATAGTA+TGG + chr5.4:62433106-62433125 None:intergenic 35.0%
AGGTGATGTGCAACTAAATA+TGG + chr5.4:62431794-62431813 None:intergenic 35.0%
ATAAACAAATGGTTGGCACT+TGG + chr5.4:62432036-62432055 None:intergenic 35.0%
ATATACTCCCAAACAGAATC+GGG + chr5.4:62432779-62432798 None:intergenic 35.0%
ATCAACGAGCTAATAGCTAA+TGG - chr5.4:62431187-62431206 MS.gene54189:intron 35.0%
ATGATCATATCAGCCTTAAG+AGG + chr5.4:62433135-62433154 None:intergenic 35.0%
ATTACCCCAACAAAAGTTTG+AGG + chr5.4:62430545-62430564 None:intergenic 35.0%
CAAGCTCAAACTCCATTTAA+AGG - chr5.4:62433890-62433909 MS.gene54189:CDS 35.0%
CAAGTCAAATCTTGCAGTTA+TGG - chr5.4:62433745-62433764 MS.gene54189:intron 35.0%
CACATGTATCATTAGCAAAG+TGG - chr5.4:62430778-62430797 MS.gene54189:CDS 35.0%
CATACAGATTATCCATCTCA+TGG - chr5.4:62430977-62430996 MS.gene54189:intron 35.0%
CATATACTCCCAAACAGAAT+CGG + chr5.4:62432780-62432799 None:intergenic 35.0%
CCAATCATGCTTGAATACAA+TGG + chr5.4:62432950-62432969 None:intergenic 35.0%
CCATGATTGTATATATCTGC+AGG - chr5.4:62435131-62435150 MS.gene54189:intron 35.0%
CCATTGTATTCAAGCATGAT+TGG - chr5.4:62432947-62432966 MS.gene54189:intron 35.0%
CCTGCAGATATATACAATCA+TGG + chr5.4:62435134-62435153 None:intergenic 35.0%
CCTTTGTCCTATACTGAAAA+TGG - chr5.4:62433713-62433732 MS.gene54189:intron 35.0%
CTGATTGAAGATATGAGAGA+TGG + chr5.4:62435444-62435463 None:intergenic 35.0%
CTTCTTTGACATATCTGCTA+AGG - chr5.4:62432161-62432180 MS.gene54189:intron 35.0%
GAATAGCGTTACAATCTTAC+TGG - chr5.4:62434269-62434288 MS.gene54189:intron 35.0%
GAGAGGAATCAAAGGAAAAT+TGG + chr5.4:62432749-62432768 None:intergenic 35.0%
GAGATTGTATAGAATGCAGT+AGG + chr5.4:62432199-62432218 None:intergenic 35.0%
GATCATATATGCAATGCCAA+GGG - chr5.4:62433149-62433168 MS.gene54189:intron 35.0%
GATGAAAATACATGCAGAGA+GGG + chr5.4:62433807-62433826 None:intergenic 35.0%
GCAGATATATACAATCATGG+AGG + chr5.4:62435131-62435150 None:intergenic 35.0%
GCCAAATAAAACCCTTTCAA+AGG - chr5.4:62432843-62432862 MS.gene54189:intron 35.0%
GCTTAGAAGGTTATAGTATG+GGG + chr5.4:62433104-62433123 None:intergenic 35.0%
GGCTTAGAAGGTTATAGTAT+GGG + chr5.4:62433105-62433124 None:intergenic 35.0%
GGGAATATGAAGATATGTGT+AGG + chr5.4:62433412-62433431 None:intergenic 35.0%
GTAAAGTTTCCCATCCAAAA+AGG + chr5.4:62433273-62433292 None:intergenic 35.0%
GTATTGAAGCAAATAGACAC+AGG + chr5.4:62435501-62435520 None:intergenic 35.0%
GTTTACTTGTAAGATTGGCA+AGG + chr5.4:62434915-62434934 None:intergenic 35.0%
GTTTATGACACCATTGACAA+CGG - chr5.4:62434711-62434730 MS.gene54189:CDS 35.0%
TAAGCCTACTTATCCTCTTA+AGG - chr5.4:62433119-62433138 MS.gene54189:intron 35.0%
TAAGGTCTACAAGCTAAGAA+AGG + chr5.4:62432454-62432473 None:intergenic 35.0%
TACACACATTGCTACAAAAC+AGG - chr5.4:62433183-62433202 MS.gene54189:intron 35.0%
TAGTATTCTAGACCATGAGA+TGG + chr5.4:62430992-62431011 None:intergenic 35.0%
TAGTGAAATGTTCAGAGTGT+CGG + chr5.4:62433475-62433494 None:intergenic 35.0%
TCAGTATAGGACAAAGGATA+TGG + chr5.4:62433710-62433729 None:intergenic 35.0%
TCAGTATGAGTTTCCTACTT+GGG + chr5.4:62433649-62433668 None:intergenic 35.0%
TCTTGATAAAGACACGACAA+AGG + chr5.4:62433982-62434001 None:intergenic 35.0%
TGATCATATATGCAATGCCA+AGG - chr5.4:62433148-62433167 MS.gene54189:intron 35.0%
TGCCATATATATGGTAGATG+CGG - chr5.4:62433517-62433536 MS.gene54189:intron 35.0%
TGGAAGAAATAGAGGGAAAA+AGG + chr5.4:62434535-62434554 None:intergenic 35.0%
TGGAATCAAGTGAGTCTTTA+AGG + chr5.4:62432729-62432748 None:intergenic 35.0%
TGGCAAAGGAACAAGTATAT+GGG - chr5.4:62429963-62429982 MS.gene54189:CDS 35.0%
TGTCGTGTCTTTATCAAGAA+TGG - chr5.4:62433983-62434002 MS.gene54189:CDS 35.0%
TTAAATGGAGTTTGAGCTTG+CGG + chr5.4:62433890-62433909 None:intergenic 35.0%
TTACCCCAACAAAAGTTTGA+GGG + chr5.4:62430544-62430563 None:intergenic 35.0%
TTCAGTATGAGTTTCCTACT+TGG + chr5.4:62433650-62433669 None:intergenic 35.0%
TTTATGACACCATTGACAAC+GGG - chr5.4:62434712-62434731 MS.gene54189:CDS 35.0%
! AATGAAGGACACTTTGGAAA+AGG + chr5.4:62433562-62433581 None:intergenic 35.0%
! ACAATTTTGAATGGGGTGAA+GGG - chr5.4:62435613-62435632 MS.gene54189:intron 35.0%
! AGAGGAAGAAATGTTGTTTG+TGG + chr5.4:62433595-62433614 None:intergenic 35.0%
! ATTCCCTCAAACTTTTGTTG+GGG - chr5.4:62430538-62430557 MS.gene54189:intron 35.0%
! CCATTTTCAGTATAGGACAA+AGG + chr5.4:62433716-62433735 None:intergenic 35.0%
! CTGTTGGACAATTTTGAATG+GGG - chr5.4:62435606-62435625 MS.gene54189:intron 35.0%
! GCTGTTGGACAATTTTGAAT+GGG - chr5.4:62435605-62435624 MS.gene54189:intron 35.0%
! GTATTCCCTCAAACTTTTGT+TGG - chr5.4:62430536-62430555 MS.gene54189:intron 35.0%
! TATCAATCCCCTTTTTGGAT+GGG - chr5.4:62433261-62433280 MS.gene54189:intron 35.0%
! TTATCAATCCCCTTTTTGGA+TGG - chr5.4:62433260-62433279 MS.gene54189:intron 35.0%
! TTTTTAACATCGTGATGTGG+TGG + chr5.4:62432529-62432548 None:intergenic 35.0%
!! AGTGAAGGCATTAATCAAGA+AGG - chr5.4:62431142-62431161 MS.gene54189:intron 35.0%
!! CATGAATGAACTTGATTTGC+AGG - chr5.4:62435340-62435359 MS.gene54189:intron 35.0%
!! CATTCTAGGATGATGGTTAA+GGG + chr5.4:62433438-62433457 None:intergenic 35.0%
!! GCTAAAAGTGTCACATGTTA+GGG + chr5.4:62433677-62433696 None:intergenic 35.0%
!! GTGAAGGCATTAATCAAGAA+GGG - chr5.4:62431143-62431162 MS.gene54189:intron 35.0%
!! TCATTCTAGGATGATGGTTA+AGG + chr5.4:62433439-62433458 None:intergenic 35.0%
!! TGCTAAAAGTGTCACATGTT+AGG + chr5.4:62433678-62433697 None:intergenic 35.0%
!! TGCTTTTTAACATCGTGATG+TGG + chr5.4:62432532-62432551 None:intergenic 35.0%
!! TTCCTCTAGATTTTGAAAGC+AGG - chr5.4:62432395-62432414 MS.gene54189:intron 35.0%
!!! AACCCTTTTGAGATGTAGTT+TGG + chr5.4:62434243-62434262 None:intergenic 35.0%
!!! ATTTTTTTGTAGCGCCATTG+TGG + chr5.4:62431557-62431576 None:intergenic 35.0%
AAAGCTGGATGATGCATCAA+AGG + chr5.4:62433075-62433094 None:intergenic 40.0%
AAATGATCCAACACTGCCAT+TGG - chr5.4:62435375-62435394 MS.gene54189:intron 40.0%
AAGACACGACAAAGGATATG+TGG + chr5.4:62433974-62433993 None:intergenic 40.0%
AAGCACTTAAGGACATTGAC+AGG - chr5.4:62435401-62435420 MS.gene54189:intron 40.0%
AAGGCATGGAGAAGAAGATA+AGG + chr5.4:62432472-62432491 None:intergenic 40.0%
ACACATTGCTACAAAACAGG+TGG - chr5.4:62433186-62433205 MS.gene54189:intron 40.0%
ACAGATGGAAGGATAAGTGA+AGG - chr5.4:62431127-62431146 MS.gene54189:intron 40.0%
ACATCTCAAAAGGGTTGGAT+AGG - chr5.4:62434247-62434266 MS.gene54189:intron 40.0%
AGAGGATAAGTAGGCTTAGA+AGG + chr5.4:62433117-62433136 None:intergenic 40.0%
AGCAGCCACAAGGATATAAA+AGG + chr5.4:62432491-62432510 None:intergenic 40.0%
AGGATCGGCGTAAATGTAAA+AGG - chr5.4:62435567-62435586 MS.gene54189:intron 40.0%
AGTATATGCTGCATCAGATG+AGG - chr5.4:62432792-62432811 MS.gene54189:intron 40.0%
ATCAAAAGCTCTCAGCACAA+TGG - chr5.4:62435691-62435710 MS.gene54189:CDS 40.0%
ATGGAGATGTCTCTATTGAC+GGG - chr5.4:62430732-62430751 MS.gene54189:intron 40.0%
ATTATGAGTCCAATTGTCCG+AGG + chr5.4:62432107-62432126 None:intergenic 40.0%
CACCTTCATCCGAAAAAAGA+GGG - chr5.4:62434032-62434051 MS.gene54189:CDS 40.0%
CATAGAATCCTTTCCAAGGA+AGG + chr5.4:62433026-62433045 None:intergenic 40.0%
CCACAAGGATATAAAAGGCA+TGG + chr5.4:62432486-62432505 None:intergenic 40.0%
GAGCTTTGCTTCAAGGAATT+TGG - chr5.4:62431629-62431648 MS.gene54189:intron 40.0%
GGCGTGTTTACTTGTAAGAT+TGG + chr5.4:62434920-62434939 None:intergenic 40.0%
GTAATCAACACCAAGTTGCT+GGG - chr5.4:62432640-62432659 MS.gene54189:intron 40.0%
GTAGATGACTTGATATTCGC+AGG + chr5.4:62432317-62432336 None:intergenic 40.0%
GTCCTGCTTTCAAAATCTAG+AGG + chr5.4:62432400-62432419 None:intergenic 40.0%
GTGAGAGTCTAAATTACTGC+AGG - chr5.4:62434198-62434217 MS.gene54189:intron 40.0%
GTGGCAAAGGAACAAGTATA+TGG - chr5.4:62429962-62429981 MS.gene54189:CDS 40.0%
GTTAATGCGATATTTCCACC+TGG - chr5.4:62431713-62431732 MS.gene54189:intron 40.0%
TAGATGCGGCATGAATCAAA+AGG - chr5.4:62433531-62433550 MS.gene54189:intron 40.0%
TCAGCCTTAAGAGGATAAGT+AGG + chr5.4:62433126-62433145 None:intergenic 40.0%
TCCTTAAAAGTCTGTACCCT+CGG - chr5.4:62432087-62432106 MS.gene54189:intron 40.0%
TCCTTAAGTGCTTCATCCAA+TGG + chr5.4:62435394-62435413 None:intergenic 40.0%
TCTATACAATCTCAACACCC+TGG - chr5.4:62432206-62432225 MS.gene54189:intron 40.0%
TGCCGCATCTACCATATATA+TGG + chr5.4:62433522-62433541 None:intergenic 40.0%
TGCTTGTCAAGACTGATGAA+AGG + chr5.4:62432373-62432392 None:intergenic 40.0%
TGTAATCAACACCAAGTTGC+TGG - chr5.4:62432639-62432658 MS.gene54189:intron 40.0%
TTATGAGTCCAATTGTCCGA+GGG + chr5.4:62432106-62432125 None:intergenic 40.0%
TTGATCCACGCTAACATATG+TGG + chr5.4:62432974-62432993 None:intergenic 40.0%
TTGGAGATAGAGTGAAGTAC+TGG - chr5.4:62431648-62431667 MS.gene54189:intron 40.0%
TTGGATGGGAAACTTTACAC+TGG - chr5.4:62433275-62433294 MS.gene54189:intron 40.0%
TTTGCTTTCTCATCCCAAGT+AGG - chr5.4:62433633-62433652 MS.gene54189:intron 40.0%
! AGGACACTTTGGAAAAGGTA+TGG + chr5.4:62433557-62433576 None:intergenic 40.0%
! AGGATGATGGTTAAGGGAAA+GGG + chr5.4:62433432-62433451 None:intergenic 40.0%
! ATATTTTGCATGGTCGCTGT+TGG - chr5.4:62435590-62435609 MS.gene54189:intron 40.0%
! ATCATTGTTAATGGTGGTGC+AGG - chr5.4:62434499-62434518 MS.gene54189:CDS 40.0%
! CAATTGACTTCATGCTTGGA+TGG - chr5.4:62434341-62434360 MS.gene54189:CDS 40.0%
! CCATGCCTTTTATATCCTTG+TGG - chr5.4:62432483-62432502 MS.gene54189:intron 40.0%
! CGCTGTTGGACAATTTTGAA+TGG - chr5.4:62435604-62435623 MS.gene54189:intron 40.0%
! GAAACTGTTGGTCTACATCA+AGG - chr5.4:62435194-62435213 MS.gene54189:intron 40.0%
! GAAGTATCAAGGATCTACCA+AGG + chr5.4:62433938-62433957 None:intergenic 40.0%
! GACAATTTTGAATGGGGTGA+AGG - chr5.4:62435612-62435631 MS.gene54189:intron 40.0%
! GTCTGCTCCATTTTCAGTAT+AGG + chr5.4:62433723-62433742 None:intergenic 40.0%
! TAGGATGATGGTTAAGGGAA+AGG + chr5.4:62433433-62433452 None:intergenic 40.0%
! TCTCTATTGACGGGTATCAT+CGG - chr5.4:62430741-62430760 MS.gene54189:intron 40.0%
!! AGGGTACAGACTTTTAAGGA+CGG + chr5.4:62432087-62432106 None:intergenic 40.0%
!! CAGAGATCATTCTAGGATGA+TGG + chr5.4:62433445-62433464 None:intergenic 40.0%
!! TCAATGAGGCAGAAGTATCA+AGG + chr5.4:62433949-62433968 None:intergenic 40.0%
!!! AACCCTCTTTTTTCGGATGA+AGG + chr5.4:62434037-62434056 None:intergenic 40.0%
AAAAGAACCGTTGAGTAGCC+TGG + chr5.4:62434803-62434822 None:intergenic 45.0%
AAAGAAGTCTGCGAGAGATG+TGG + chr5.4:62432148-62432167 None:intergenic 45.0%
AAGGCTCGTCTATCAGCAAA+GGG + chr5.4:62432671-62432690 None:intergenic 45.0%
ACCTCCATACTCATCTTCCA+AGG + chr5.4:62431340-62431359 None:intergenic 45.0%
AGGGAATCTGTGAGATAGCA+AGG + chr5.4:62434895-62434914 None:intergenic 45.0%
AGTATGGGGTTTGTCAAAGC+TGG + chr5.4:62433090-62433109 None:intergenic 45.0%
ATATCCACCTGTGCAGTAAG+TGG + chr5.4:62431693-62431712 None:intergenic 45.0%
ATCTTGCAGTTATGGGTCTG+AGG - chr5.4:62433753-62433772 MS.gene54189:intron 45.0%
CAAGCCTTGGAAGATGAGTA+TGG - chr5.4:62431333-62431352 MS.gene54189:CDS 45.0%
CAATCAGAACATCTACCAGG+TGG + chr5.4:62431731-62431750 None:intergenic 45.0%
CACCTGGTAGATGTTCTGAT+TGG - chr5.4:62431729-62431748 MS.gene54189:intron 45.0%
CCTGACTGTTGTCTTTCAAC+CGG + chr5.4:62433302-62433321 None:intergenic 45.0%
CTATGCAGAGTTTGACGAAG+AGG + chr5.4:62433613-62433632 None:intergenic 45.0%
GAACAAACCAGGCTACTCAA+CGG - chr5.4:62434793-62434812 MS.gene54189:intron 45.0%
GAGTGTATAGCAGTGTAGCT+AGG - chr5.4:62431512-62431531 MS.gene54189:intron 45.0%
GCACCTTCATCCGAAAAAAG+AGG - chr5.4:62434031-62434050 MS.gene54189:CDS 45.0%
GCAGCTACAAGCCCTTTAAA+TGG + chr5.4:62433905-62433924 None:intergenic 45.0%
GCTGCTAGATGAGATACACA+TGG + chr5.4:62432602-62432621 None:intergenic 45.0%
GTGTAGGCAGCGTTATTCAA+GGG + chr5.4:62433396-62433415 None:intergenic 45.0%
GTGTATCTCATCTAGCAGCA+GGG - chr5.4:62432603-62432622 MS.gene54189:intron 45.0%
TACAATCTCAACACCCTGGT+AGG - chr5.4:62432210-62432229 MS.gene54189:intron 45.0%
TACTCATCTTCCAAGGCTTG+TGG + chr5.4:62431333-62431352 None:intergenic 45.0%
TCAGGTTCTTCTCTTGCAAC+TGG - chr5.4:62433317-62433336 MS.gene54189:intron 45.0%
TCGTTCTGCAGCTCTTTCAT+CGG + chr5.4:62434320-62434339 None:intergenic 45.0%
TGCCAATCAGAACATCTACC+AGG + chr5.4:62431734-62431753 None:intergenic 45.0%
TGGGAAACTTTACACTGGTC+CGG - chr5.4:62433280-62433299 MS.gene54189:intron 45.0%
TGTAGGCAGCGTTATTCAAG+GGG + chr5.4:62433395-62433414 None:intergenic 45.0%
TGTGTAGGCAGCGTTATTCA+AGG + chr5.4:62433397-62433416 None:intergenic 45.0%
TGTGTATCTCATCTAGCAGC+AGG - chr5.4:62432602-62432621 MS.gene54189:intron 45.0%
TTATGCGGAGCTTTGCTTCA+AGG - chr5.4:62431622-62431641 MS.gene54189:intron 45.0%
TTGGTCCACATATGTTAGCG+TGG - chr5.4:62432966-62432985 MS.gene54189:intron 45.0%
! CGAGCAATTGACTTCATGCT+TGG - chr5.4:62434337-62434356 MS.gene54189:CDS 45.0%
! GCCATTGGATGAAGCACTTA+AGG - chr5.4:62435390-62435409 MS.gene54189:intron 45.0%
!! AGACTTTGACATGACGGACT+TGG + chr5.4:62432248-62432267 None:intergenic 45.0%
!! GACTTTGACATGACGGACTT+GGG + chr5.4:62432247-62432266 None:intergenic 45.0%
!! GACTTTTAAGGACGGAAGTG+CGG + chr5.4:62432079-62432098 None:intergenic 45.0%
!! TCCGAGGGTACAGACTTTTA+AGG + chr5.4:62432091-62432110 None:intergenic 45.0%
!! ATTATTTATATTATTCATAT+GGG + chr5.4:62430125-62430144 None:intergenic 5.0%
!! TATTATTTATATTATTCATA+TGG + chr5.4:62430126-62430145 None:intergenic 5.0%
AACTGCACCAGTGGTGATTC+GGG - chr5.4:62431761-62431780 MS.gene54189:intron 50.0%
AAGGGATACTCCCAGCAACT+TGG + chr5.4:62432653-62432672 None:intergenic 50.0%
AATCACCACTGGTGCAGTTG+AGG + chr5.4:62431760-62431779 None:intergenic 50.0%
AATGGTTGGCACTTGGCACT+TGG + chr5.4:62432029-62432048 None:intergenic 50.0%
ACCAAGGATCGCATATGCTG+TGG + chr5.4:62434745-62434764 None:intergenic 50.0%
AGCTGCACCCGATTCTGTTT+GGG - chr5.4:62432769-62432788 MS.gene54189:intron 50.0%
AGTCTGCGAGAGATGTGGAA+TGG + chr5.4:62432143-62432162 None:intergenic 50.0%
AGTCTGTACCCTCGGACAAT+TGG - chr5.4:62432095-62432114 MS.gene54189:intron 50.0%
ATCGTCGCTTACACTATGCG+AGG + chr5.4:62431372-62431391 None:intergenic 50.0%
ATCTGCAGGCTGCTTCAGAT+TGG - chr5.4:62435145-62435164 MS.gene54189:intron 50.0%
ATTTGGCGTTTGCGCAGTGA+CGG + chr5.4:62432830-62432849 None:intergenic 50.0%
CAAAACCTCAACTGCACCAG+TGG - chr5.4:62431752-62431771 MS.gene54189:intron 50.0%
CAACTGCACCAGTGGTGATT+CGG - chr5.4:62431760-62431779 MS.gene54189:intron 50.0%
CAAGGCTCGTCTATCAGCAA+AGG + chr5.4:62432672-62432691 None:intergenic 50.0%
CAGCATATGCGATCCTTGGT+TGG - chr5.4:62434745-62434764 MS.gene54189:intron 50.0%
CCATGAAGCCTTCCTTGGAA+AGG - chr5.4:62433015-62433034 MS.gene54189:intron 50.0%
CCGGTTGAAAGACAACAGTC+AGG - chr5.4:62433299-62433318 MS.gene54189:intron 50.0%
CCTTTCCAAGGAAGGCTTCA+TGG + chr5.4:62433018-62433037 None:intergenic 50.0%
GACTTTGTTGAGCAGCCACA+AGG + chr5.4:62432501-62432520 None:intergenic 50.0%
GCCTTGGAAGATGAGTATGG+AGG - chr5.4:62431336-62431355 MS.gene54189:CDS 50.0%
GCTTCATCCAATGGCAGTGT+TGG + chr5.4:62435385-62435404 None:intergenic 50.0%
GGATAGTCTCCCGTTGTCAA+TGG + chr5.4:62434724-62434743 None:intergenic 50.0%
GTCACACTTGTACGTACCTG+TGG + chr5.4:62435062-62435081 None:intergenic 50.0%
GTGCAGCTGAGAGGAATCAA+AGG + chr5.4:62432757-62432776 None:intergenic 50.0%
GTTCTCCATGAAGCCTTCCT+TGG - chr5.4:62433010-62433029 MS.gene54189:intron 50.0%
TACGACGCGCTTGGTACAAA+AGG + chr5.4:62432428-62432447 None:intergenic 50.0%
TAGCTGCGCTTGTTTCACCT+TGG - chr5.4:62433918-62433937 MS.gene54189:CDS 50.0%
TCCACAGCATATGCGATCCT+TGG - chr5.4:62434741-62434760 MS.gene54189:intron 50.0%
TGATGGAAGCTGAGCGTAAC+GGG - chr5.4:62435024-62435043 MS.gene54189:intron 50.0%
TGGCAATCGTTGTCCAACCA+AGG + chr5.4:62434761-62434780 None:intergenic 50.0%
TTGGGATCTACCACAAGCCT+TGG - chr5.4:62431320-62431339 MS.gene54189:CDS 50.0%
! GAAGGGTACACAGTGAGGTT+TGG - chr5.4:62435630-62435649 MS.gene54189:intron 50.0%
! GTGATGGAAGCTGAGCGTAA+CGG - chr5.4:62435023-62435042 MS.gene54189:intron 50.0%
! TATGCAATGCCAAGGGTGTG+TGG - chr5.4:62433156-62433175 MS.gene54189:intron 50.0%
! TGACGGGTATCATCGGTACA+AGG - chr5.4:62430748-62430767 MS.gene54189:intron 50.0%
!! TACGAAGGTGCTGCAAAGGA+AGG - chr5.4:62429940-62429959 MS.gene54189:CDS 50.0%
!! TTTTAAGGACGGAAGTGCGG+AGG + chr5.4:62432076-62432095 None:intergenic 50.0%
ACTGCACCAGTGGTGATTCG+GGG - chr5.4:62431762-62431781 MS.gene54189:intron 55.0%
AGTTTGAGCTTGCGGCACGA+AGG + chr5.4:62433882-62433901 None:intergenic 55.0%
CAGCTGCACCCGATTCTGTT+TGG - chr5.4:62432768-62432787 MS.gene54189:intron 55.0%
CAGCTGCATGAGCAAGGAGT+AGG + chr5.4:62431814-62431833 None:intergenic 55.0%
CCACCTGTGCAGTAAGTGGA+TGG + chr5.4:62431689-62431708 None:intergenic 55.0%
CCATCCACTTACTGCACAGG+TGG - chr5.4:62431686-62431705 MS.gene54189:intron 55.0%
GAAAGGTCTTACGACGCGCT+TGG + chr5.4:62432437-62432456 None:intergenic 55.0%
GAACAGCAGCTGCATGAGCA+AGG + chr5.4:62431820-62431839 None:intergenic 55.0%
GAGCCATCCACTTACTGCAC+AGG - chr5.4:62431683-62431702 MS.gene54189:intron 55.0%
GCTGCAAAGGAAGGTGGCAA+AGG - chr5.4:62429949-62429968 MS.gene54189:CDS 55.0%
GGCAGAATCAGCTCCTACCA+GGG + chr5.4:62432226-62432245 None:intergenic 55.0%
GTACGTACCTGTGGACCGAT+GGG + chr5.4:62435053-62435072 None:intergenic 55.0%
GTGTAGAAGCCACACACCCT+TGG + chr5.4:62433168-62433187 None:intergenic 55.0%
TGTACGTACCTGTGGACCGA+TGG + chr5.4:62435054-62435073 None:intergenic 55.0%
TTTGGCGTTTGCGCAGTGAC+GGG + chr5.4:62432829-62432848 None:intergenic 55.0%
! GAGCGTAACGGGATACCCAT+CGG - chr5.4:62435035-62435054 MS.gene54189:intron 55.0%
!! GAAGGTGCTGCAAAGGAAGG+TGG - chr5.4:62429943-62429962 MS.gene54189:CDS 55.0%
CAGAATCGGGTGCAGCTGAG+AGG + chr5.4:62432766-62432785 None:intergenic 60.0%
CGGCACGAAGGAGGGAGAAA+CGG + chr5.4:62433870-62433889 None:intergenic 60.0%
CTCTGTCCCCGAATCACCAC+TGG + chr5.4:62431771-62431790 None:intergenic 60.0%
GGGCAGAATCAGCTCCTACC+AGG + chr5.4:62432227-62432246 None:intergenic 60.0%
TGAGCTTGCGGCACGAAGGA+GGG + chr5.4:62433878-62433897 None:intergenic 60.0%
TTGAGCTTGCGGCACGAAGG+AGG + chr5.4:62433879-62433898 None:intergenic 60.0%
! GGGGTGAAGGGTACACAGTG+AGG - chr5.4:62435625-62435644 MS.gene54189:intron 60.0%
CGGGATACCCATCGGTCCAC+AGG - chr5.4:62435043-62435062 MS.gene54189:intron 65.0%
! GGCGTTTGCGCAGTGACGGG+TGG + chr5.4:62432826-62432845 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 62429940 62435740 62429940 ID=MS.gene54189
chr5.4 mRNA 62429940 62435740 62429940 ID=MS.gene54189.t1;Parent=MS.gene54189
chr5.4 exon 62435671 62435740 62435671 ID=MS.gene54189.t1.exon1;Parent=MS.gene54189.t1
chr5.4 CDS 62435671 62435740 62435671 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62434911 62434969 62434911 ID=MS.gene54189.t1.exon2;Parent=MS.gene54189.t1
chr5.4 CDS 62434911 62434969 62434911 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62434665 62434740 62434665 ID=MS.gene54189.t1.exon3;Parent=MS.gene54189.t1
chr5.4 CDS 62434665 62434740 62434665 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62434472 62434549 62434472 ID=MS.gene54189.t1.exon4;Parent=MS.gene54189.t1
chr5.4 CDS 62434472 62434549 62434472 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62434301 62434388 62434301 ID=MS.gene54189.t1.exon5;Parent=MS.gene54189.t1
chr5.4 CDS 62434301 62434388 62434301 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62433818 62434073 62433818 ID=MS.gene54189.t1.exon6;Parent=MS.gene54189.t1
chr5.4 CDS 62433818 62434073 62433818 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62431318 62431460 62431318 ID=MS.gene54189.t1.exon7;Parent=MS.gene54189.t1
chr5.4 CDS 62431318 62431460 62431318 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62430752 62430969 62430752 ID=MS.gene54189.t1.exon8;Parent=MS.gene54189.t1
chr5.4 CDS 62430752 62430969 62430752 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62430616 62430647 62430616 ID=MS.gene54189.t1.exon9;Parent=MS.gene54189.t1
chr5.4 CDS 62430616 62430647 62430616 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62430425 62430527 62430425 ID=MS.gene54189.t1.exon10;Parent=MS.gene54189.t1
chr5.4 CDS 62430425 62430527 62430425 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62430210 62430318 62430210 ID=MS.gene54189.t1.exon11;Parent=MS.gene54189.t1
chr5.4 CDS 62430210 62430318 62430210 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
chr5.4 exon 62429940 62430111 62429940 ID=MS.gene54189.t1.exon12;Parent=MS.gene54189.t1
chr5.4 CDS 62429940 62430111 62429940 ID=cds.MS.gene54189.t1;Parent=MS.gene54189.t1
Gene Sequence

>MS.gene54189

TACGAAGGTGCTGCAAAGGAAGGTGGCAAAGGAACAAGTATATGGGATACCTTTACTCACAAATATCCAGGTATCTCTATCTATCTATTTACCTTTAGAAAGCTTTTAAATTAATTATTTATTAAAATCTAGTTAATTTTTTATGAAATTAATTAAGCTTCATACAAAAGAAAAAACTATCTCCCATATGAATAATATAAATAATAATAATAGATATTTATACGTAGACTAAAGAAACCCGAAATTACAATAATTAAAACATAATTTATTCTGAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATATAATGTTTAATTTATTTCTTTCATAAAACAAAAAAGTTTATAGATGTTTTTGGTTCCTTCAAACTAGAATTAAACCTTAATTCAAAATAAATAATGTGTTAATTATTTTTTTAGGGTAAATAATGTGTTAATTATTGTAATTTAGAGTTTCTTAAGAGTAAATATATTACAAGTACGTAAACGTAAAAAAATACATTATAAACTTTTTTGATCTTGTACTAGAATAAACTTGTATTCCCTCAAACTTTTGTTGGGGTAATTTATTTCTTAAGATCAAATAAACTAGTATATATTTAAGAGTGTAATTATATCCTTCAAAATACATATACTATAAGGATTAAAACAAAACAACTAGAATGTATGTAAATGCATAACTTACATTTAATCAATGGTGATCGATATACAGAAAAAATAATCGACAGAAGCAATGGAGATGTCTCTATTGACGGGTATCATCGGTACAAGGTATGATTCACATGTATCATTAGCAAAGTGGTTAAACTTAAACTTTCACTTAATGCAAAAATGTCTCAAACAAATTTTACTTTAGGTTTCACTCAATGGATTTTCTACTAAAATTCTTTAATATATCGATGTATTTTATTTTTATGTTATAGAAAATTTGTTTTATACAGGAAGATGTTGGGATCATGAAGTATATGAATTTAGATGCATACAGATTATCCATCTCATGGTCTAGAATACTACCAAGTAAGTTGATAATTTCCTATCCTTAAACAATGCAGTTATCAAGTAAATTATTGCAGTCTTAGTAAACTACATCCACATTTAATCAAAAAAAATTAAAATAAAACTATATTCACAGATGGAAGGATAAGTGAAGGCATTAATCAAGAAGGGCTCACATTCTACAACAACTTCATCAACGAGCTAATAGCTAATGGTCAGAAATATTAAAATATGCATTTTATAATTTCTTAAGCATAGTACATTGCAATCATAATTGAAAAATTATTAGTTTTGCAGGTATAGAAGTCTTTGTGACACTATTTCATTGGGATCTACCACAAGCCTTGGAAGATGAGTATGGAGGTTTCTTAAGTCCTCGCATAGTGTAAGCGACGATGTACTAACATTAAAACTATAATTTATTTAGAATTATATGAGTAAATTAAATTTTCTTCTAAGTTGAAGAATGCTTTAGATGTGAAACTAGTATATCATTTTGTGCATGGAGCAGTAAGAAGAGTGTATAGCAGTGTAGCTAGGTTTCATTCTAAATTTTACGCCACAATGGCGCTACAAAAAAATTGATAATACTTTTCTGTTTTGAACTTTTAGAAATGATTTTCGGGATTATGCGGAGCTTTGCTTCAAGGAATTTGGAGATAGAGTGAAGTACTGGATTACTATAAATGAGCCATCCACTTACTGCACAGGTGGATATGTTAATGCGATATTTCCACCTGGTAGATGTTCTGATTGGCAAAACCTCAACTGCACCAGTGGTGATTCGGGGACAGAGCCATATTTAGTTGCACATCACCTACTCCTTGCTCATGCAGCTGCTGTTCAAGTTTACAAGACAAAATATCAGGTTCATTTTAACTCTTAGTGATGATAACATTGAAGCTCTAAAATGTACCAAACTTATGTATATAGACACAAGTAATTAAAATTTGCATATGATATTAAAATAATTTCAATATCAGTTTAAAAATTGTAGGTAAGGTCGAATCGTTCAAGTAATACTTGTGCTGCCAAGTGCCAAGTGCCAACCATTTGTTTATAAACTGTGACATAATTTCCTCCGCACTTCCGTCCTTAAAAGTCTGTACCCTCGGACAATTGGACTCATAATTGAGTTTCTATTTCCATTCCACATCTCTCGCAGACTTCTTTGACATATCTGCTAAGGCTGATATATATTCCTACTGCATTCTATACAATCTCAACACCCTGGTAGGAGCTGATTCTGCCCAAGTCCGTCATGTCAAAGTCTCTTTCTGTAGTTTTTTTGAATTTTTTGAACATGTCTTTTATTGTTTCCTGCGAATATCAAGTCATCTACATGTTCTGCCCAACTCACAATTACTAAACTCTTCCTTTCATCAGTCTTGACAAGCAGTTTCCTCTAGATTTTGAAAGCAGGACATAATCCTTTTGTACCAAGCGCGTCGTAAGACCTTTCTTAGCTTGTAGACCTTATCTTCTTCTCCATGCCTTTTATATCCTTGTGGCTGCTCAACAAAGTCAGTTTCCACCACATCACGATGTTAAAAAGCACTTTCGCATCTAGTTGATAAACGCACCATCATTTGAAATTTGTAAGACCATGTGTATCTCATCTAGCAGCAGGGAAAAACATTTGACTGTAATCAACACCAAGTTGCTGGGAGTATCCCTTTGCTGATAGACGAGCCTTGTATTTTTCTACTTCTGCTCTCTAGTTGAACTTAGCCTTAAAGACTCACTTGATTCCAATTTTCCTTTGATTCCTCTCAGCTGCACCCGATTCTGTTTGGGAGTATATGCTGCATCAGATGAGGTGAATTTTCCACCCGTCACTGCGCAAACGCCAAATAAAACCCTTTCAAAGGTATATACCCTTTTCAAATAAAAAGTAAACCTACATTTTTCTACTACAGTCATCAATAAAAGTTATGAAATACATCTTGTTCCCATTGTATTCAAGCATGATTGGTCCACATATGTTAGCGTGGATCAACTTCAGAACTTGAGATGTTCTCCATGAAGCCTTCCTTGGAAAGGATTCTATGTGTTTCTATCTTGCAATCACTGCACACCTTTGATGCATCATCCAGCTTTGACAAACCCCATACTATAACCTTCTAAGCCTACTTATCCTCTTAAGGCTGATATGATCATATATGCAATGCCAAGGGTGTGTGGCTTCTACACACATTGCTACAAAACAGGTGGAAGATATGACTGAGATCTTAAACATTAGACTGGATGACATCTGAGATTGAATTATCAATCCCCTTTTTGGATGGGAAACTTTACACTGGTCCGGTTGAAAGACAACAGTCAGGTTCTTCTCTTGCAACTGGCCGATACTAAGAAGATTGTTCTTTAGATCAGGAATATAGTATACATCAGATACCCCTTGAATAACGCTGCCTACACATATCTTCATATTCCCTTTCCCTTAACCATCATCCTAGAATGATCTCTGAGTTTTACCGACACTCTGAACATTTCACTAAGACTGTGAAACTAATTCTTATTGCCATATATATGGTAGATGCGGCATGAATCAAAAGGCCATACCTTTTCCAAAGTGTCCTTCATTTCAATATGAACCACAAACAACATTTCTTCCTCTTCGTCAAACTCTGCATAGTTTGCTTTCTCATCCCAAGTAGGAAACTCATACTGAAAATGCCCTAACATGTGACACTTTTAGCATTCAACGAACCATATCCTTTGTCCTATACTGAAAATGGAGCAGACAACAAGTCAAATCTTGCAGTTATGGGTCTGAGGATCTTGTCAACAACTGTCATTTGTTCTACCCTCTCTGCATGTATTTTCATCTTATTGACAATGTCGAGAGTTCTTGCAATGTATACATCAACCGTTTCTCCCTCCTTCGTGCCGCAAGCTCAAACTCCATTTAAAGGGCTTGTAGCTGCGCTTGTTTCACCTTGGTAGATCCTTGATACTTCTGCCTCATTGAATCCACATATCCTTTGTCGTGTCTTTATCAAGAATGGTCTCCATTCTTGATACTTCTAATTAGCACCTTCATCCGAAAAAAGAGGGTTAAGATGAAAAGGTTTTTTGTAAAATAAAAAAAACAAAGATGCAAAAAGTCTTGTATCATGATCATCTTATATCTAAGCATTGTATTAGTTGTGTCTATAGACAAGTGCACATAAAAGTTTTATGTACTTGAATACTAATTTGTGAGAGTCTAAATTACTGCAGGTGCCATTGTTGCTTAAAAGCCAAACTACATCTCAAAAGGGTTGGATAGGAATAGCGTTACAATCTTACTGGTTTGTGCCATTTTCAAATAGCAAATCCGATGAAAGAGCTGCAGAACGAGCAATTGACTTCATGCTTGGATGGTTAGTAGCTCATTGCACACTCGCCCTATATATGAAATTATGAACTTAACATGACTTGATTATATAAAAAAGAAAAAACAAATGGAGCATGATTTACTAATGAATGTTCATTTTTTGTTCATCTCTCAAATTATGAATCATTGTTAATGGTGGTGCAGGTTAAATAAAGCCTTTTTCCCTCTATTTCTTCCATTGATTTTATTTTGATCTACATTGTTGAAGTATATCATTTATTTTTTACACACTATATGCATGATCATGAATCAATGATAAAAATACGTGTGTGTGCGCGCACGCGCATAGCACCATAAGAGAGCTGAAAAATTTCAATTGAAATCTCAATTGCAGGTTTATGACACCATTGACAACGGGAGACTATCCACAGCATATGCGATCCTTGGTTGGACAACGATTGCCAAATTTCTATGAAGAACAAACCAGGCTACTCAACGGTTCTTTTGATTTTATCGGATTAAACTACTACACATCTAGATATGCAGCCAATGCACCTAATTTAAACACTACTATACCTTGCTATCTCACAGATTCCCTTGCCAATCTTACAAGTAAACACGCCTTTATTCATCACTTATATCATAATTAATTTTAACTAATAATTTAAATCTATGTTGAATTTGACGATAAGCTCTCTTATTTTTTGTGATGGAAGCTGAGCGTAACGGGATACCCATCGGTCCACAGGTACGTACAAGTGTGACCACGTCAAATGAAGTTTTATCTTTCTGGTAAAATAAAAATATGAAACCTCCATGATTGTATATATCTGCAGGCTGCTTCAGATTGGTTTTATAGTTATCCAATTGGATTTATGAAACTGTTGGTCTACATCAAGGAAAAGTACAACAATCCAGTGATTTATGTTACCGAAAATGGTAAATTACAACAATCGTCGATAAATATTGCAACGTAAATATATGAATGAACATGAATATGTGAACTTGTTTTGGTACATCACACATGAATGAACTTGATTTGCAGGTATAGATGAGAAAAATGATCCAACACTGCCATTGGATGAAGCACTTAAGGACATTGACAGGATTAATTATTATCATGACCATCTCTCATATCTTCAATCAGCAATTAGGTAATGGTTGCTTTTATGTCTAAAAATCCTGTGTCTATTTGCTTCAATACACATCTTAATACTTTCTATTTTATTTTGGTTTTTGTGAATATACAAAGGATCGGCGTAAATGTAAAAGGATATTTTGCATGGTCGCTGTTGGACAATTTTGAATGGGGTGAAGGGTACACAGTGAGGTTTGGAATGAACTTTGTAGATTACAAAAATAACTTGAAAAGATATCAAAAGCTCTCAGCACAATGGTTCAAGAATTTTTTGAAGACACTCTAG
Protein sequence

>MS.gene54189.t1

YEGAAKEGGKGTSIWDTFTHKYPEKIIDRSNGDVSIDGYHRYKEDVGIMKYMNLDAYRLSISWSRILPNGRISEGINQEGLTFYNNFINELIANGIEVFVTLFHWDLPQALEDEYGGFLSPRIVNDFRDYAELCFKEFGDRVKYWITINEPSTYCTGGYVNAIFPPGRCSDWQNLNCTSGDSGTEPYLVAHHLLLAHAAAVQVYKTKYQVPLLLKSQTTSQKGWIGIALQSYWFVPFSNSKSDERAAERAIDFMLGWFMTPLTTGDYPQHMRSLVGQRLPNFYEEQTRLLNGSFDFIGLNYYTSRYAANAPNLNTTIPCYLTDSLANLTTERNGIPIGPQAASDWFYSYPIGFMKLLVYIKEKYNNPVIYVTENGIDEKNDPTLPLDEALKDIDRINYYHDHLSYLQSAIRIGVNVKGYFAWSLLDNFEWGEGYTVRFGMNFVDYKNNLKRYQKLSAQWFKNFLKTL