Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54270.t1 | XP_004497487.1 | 70.1 | 556 | 166 | 0 | 28 | 583 | 1 | 556 | 6.90E-231 | 810.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54270.t1 | B9SCB6 | 50.1 | 553 | 272 | 2 | 28 | 580 | 1 | 549 | 4.0e-163 | 576.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54270.t1 | A0A1S2Y0Q7 | 70.1 | 556 | 166 | 0 | 28 | 583 | 1 | 556 | 4.9e-231 | 810.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060118 | MS.gene54270 | 0.821121 | 4.78E-53 | -1.69E-46 |
| MS.gene060119 | MS.gene54270 | 0.836341 | 9.90E-57 | -1.69E-46 |
| MS.gene060120 | MS.gene54270 | 0.829248 | 5.72E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54270 | MS.gene069726 | PPI |
| MS.gene54270 | MS.gene045736 | PPI |
| MS.gene038985 | MS.gene54270 | PPI |
| MS.gene066310 | MS.gene54270 | PPI |
| MS.gene038982 | MS.gene54270 | PPI |
| MS.gene77594 | MS.gene54270 | PPI |
| MS.gene54270 | MS.gene42723 | PPI |
| MS.gene066316 | MS.gene54270 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54270.t1 | MTR_5g062230 | 68.705 | 556 | 171 | 1 | 28 | 583 | 1 | 553 | 0.0 | 805 |
| MS.gene54270.t1 | MTR_6g039440 | 68.345 | 556 | 173 | 1 | 28 | 583 | 1 | 553 | 0.0 | 801 |
| MS.gene54270.t1 | MTR_6g008560 | 67.325 | 557 | 181 | 1 | 28 | 583 | 1 | 557 | 0.0 | 798 |
| MS.gene54270.t1 | MTR_3g464190 | 66.607 | 557 | 185 | 1 | 28 | 583 | 1 | 557 | 0.0 | 781 |
| MS.gene54270.t1 | MTR_4g048460 | 66.909 | 550 | 182 | 0 | 34 | 583 | 12 | 561 | 0.0 | 773 |
| MS.gene54270.t1 | MTR_5g073200 | 67.096 | 544 | 178 | 1 | 39 | 581 | 4 | 547 | 0.0 | 753 |
| MS.gene54270.t1 | MTR_5g073260 | 65.993 | 544 | 183 | 2 | 40 | 581 | 7 | 550 | 0.0 | 749 |
| MS.gene54270.t1 | MTR_5g094620 | 63.849 | 556 | 182 | 1 | 28 | 583 | 1 | 537 | 0.0 | 745 |
| MS.gene54270.t1 | MTR_4g081460 | 58.182 | 550 | 227 | 2 | 36 | 583 | 14 | 562 | 0.0 | 675 |
| MS.gene54270.t1 | MTR_4g048460 | 66.225 | 453 | 153 | 0 | 34 | 486 | 12 | 464 | 0.0 | 625 |
| MS.gene54270.t1 | MTR_6g008560 | 66.334 | 401 | 135 | 0 | 183 | 583 | 1 | 401 | 0.0 | 575 |
| MS.gene54270.t1 | MTR_2g082010 | 44.343 | 548 | 299 | 6 | 40 | 583 | 23 | 568 | 3.27e-173 | 503 |
| MS.gene54270.t1 | MTR_2g081980 | 45.073 | 548 | 293 | 8 | 42 | 583 | 12 | 557 | 1.99e-171 | 498 |
| MS.gene54270.t1 | MTR_8g007515 | 44.909 | 550 | 295 | 6 | 40 | 583 | 9 | 556 | 6.16e-169 | 492 |
| MS.gene54270.t1 | MTR_2g082060 | 41.667 | 564 | 308 | 9 | 28 | 583 | 3 | 553 | 1.10e-157 | 463 |
| MS.gene54270.t1 | MTR_4g019550 | 41.049 | 553 | 302 | 8 | 42 | 583 | 19 | 558 | 2.05e-143 | 426 |
| MS.gene54270.t1 | MTR_2g082050 | 38.252 | 515 | 257 | 9 | 70 | 581 | 1 | 457 | 4.30e-122 | 368 |
| MS.gene54270.t1 | MTR_4g045810 | 34.982 | 546 | 344 | 4 | 40 | 581 | 41 | 579 | 9.26e-115 | 353 |
| MS.gene54270.t1 | MTR_2g064425 | 36.531 | 542 | 330 | 9 | 44 | 581 | 53 | 584 | 1.91e-104 | 327 |
| MS.gene54270.t1 | MTR_2g089130 | 34.343 | 495 | 309 | 5 | 71 | 561 | 62 | 544 | 2.96e-101 | 318 |
| MS.gene54270.t1 | MTR_2g089120 | 34.623 | 491 | 304 | 6 | 76 | 561 | 67 | 545 | 5.74e-100 | 315 |
| MS.gene54270.t1 | MTR_8g057020 | 32.686 | 566 | 371 | 7 | 18 | 581 | 30 | 587 | 3.74e-97 | 308 |
| MS.gene54270.t1 | MTR_2g064425 | 34.871 | 542 | 324 | 10 | 44 | 581 | 53 | 569 | 3.28e-94 | 300 |
| MS.gene54270.t1 | MTR_2g065450 | 32.192 | 584 | 376 | 10 | 6 | 581 | 17 | 588 | 1.43e-92 | 296 |
| MS.gene54270.t1 | MTR_4g092020 | 33.204 | 515 | 331 | 6 | 71 | 581 | 64 | 569 | 9.46e-89 | 285 |
| MS.gene54270.t1 | MTR_2g064425 | 42.700 | 363 | 196 | 7 | 44 | 403 | 53 | 406 | 3.42e-85 | 272 |
| MS.gene54270.t1 | MTR_7g010710 | 30.521 | 557 | 378 | 6 | 28 | 580 | 1 | 552 | 1.40e-84 | 274 |
| MS.gene54270.t1 | MTR_7g057340 | 66.860 | 172 | 57 | 0 | 412 | 583 | 1 | 172 | 1.14e-83 | 259 |
| MS.gene54270.t1 | MTR_4g092010 | 31.076 | 502 | 332 | 7 | 82 | 575 | 61 | 556 | 1.14e-80 | 265 |
| MS.gene54270.t1 | MTR_7g057390 | 64.535 | 172 | 58 | 1 | 412 | 583 | 1 | 169 | 5.72e-77 | 241 |
| MS.gene54270.t1 | MTR_2g064425 | 40.220 | 363 | 190 | 8 | 44 | 403 | 53 | 391 | 7.33e-75 | 245 |
| MS.gene54270.t1 | MTR_5g094530 | 56.621 | 219 | 57 | 4 | 193 | 408 | 1 | 184 | 9.36e-74 | 234 |
| MS.gene54270.t1 | MTR_2g010960 | 28.958 | 518 | 343 | 8 | 74 | 574 | 9 | 518 | 1.15e-71 | 239 |
| MS.gene54270.t1 | MTR_6g064980 | 29.697 | 495 | 335 | 8 | 81 | 566 | 13 | 503 | 6.93e-68 | 229 |
| MS.gene54270.t1 | MTR_3g465090 | 29.774 | 487 | 335 | 6 | 81 | 561 | 13 | 498 | 1.07e-67 | 229 |
| MS.gene54270.t1 | MTR_3g063170 | 29.485 | 485 | 329 | 8 | 81 | 556 | 13 | 493 | 1.04e-66 | 226 |
| MS.gene54270.t1 | MTR_3g063120 | 28.513 | 491 | 340 | 8 | 95 | 577 | 1 | 488 | 2.57e-65 | 221 |
| MS.gene54270.t1 | MTR_3g052120 | 29.365 | 504 | 345 | 9 | 81 | 577 | 13 | 512 | 1.27e-64 | 220 |
| MS.gene54270.t1 | MTR_3g063140 | 28.980 | 490 | 335 | 8 | 81 | 561 | 13 | 498 | 3.75e-64 | 219 |
| MS.gene54270.t1 | MTR_7g050990 | 59.639 | 166 | 56 | 2 | 226 | 391 | 27 | 181 | 6.06e-56 | 203 |
| MS.gene54270.t1 | MTR_6g065040 | 29.008 | 393 | 268 | 6 | 172 | 556 | 2 | 391 | 7.10e-54 | 188 |
| MS.gene54270.t1 | MTR_3g015080 | 48.256 | 172 | 51 | 2 | 412 | 583 | 1 | 134 | 1.87e-46 | 160 |
| MS.gene54270.t1 | MTR_3g058160 | 25.670 | 522 | 334 | 16 | 97 | 581 | 65 | 569 | 9.85e-38 | 147 |
| MS.gene54270.t1 | MTR_3g058160 | 25.670 | 522 | 334 | 16 | 97 | 581 | 256 | 760 | 2.39e-37 | 148 |
| MS.gene54270.t1 | MTR_3g058160 | 25.670 | 522 | 334 | 16 | 97 | 581 | 269 | 773 | 2.78e-37 | 148 |
| MS.gene54270.t1 | MTR_3g058160 | 25.670 | 522 | 334 | 16 | 97 | 581 | 276 | 780 | 3.26e-37 | 147 |
| MS.gene54270.t1 | MTR_2g064295 | 24.427 | 524 | 338 | 17 | 97 | 581 | 256 | 760 | 1.47e-35 | 142 |
| MS.gene54270.t1 | MTR_3g063160 | 31.655 | 278 | 185 | 5 | 81 | 355 | 13 | 288 | 2.01e-35 | 135 |
| MS.gene54270.t1 | MTR_3g058160 | 25.046 | 543 | 332 | 17 | 97 | 581 | 276 | 801 | 1.18e-34 | 140 |
| MS.gene54270.t1 | MTR_2g012870 | 23.397 | 577 | 394 | 18 | 37 | 581 | 194 | 754 | 3.47e-31 | 129 |
| MS.gene54270.t1 | MTR_2g012900 | 24.324 | 518 | 339 | 18 | 37 | 513 | 194 | 699 | 1.22e-29 | 124 |
| MS.gene54270.t1 | MTR_7g011663 | 29.927 | 274 | 160 | 6 | 95 | 337 | 344 | 616 | 1.36e-23 | 106 |
| MS.gene54270.t1 | MTR_7g094970 | 27.273 | 275 | 168 | 6 | 95 | 340 | 206 | 477 | 2.02e-23 | 105 |
| MS.gene54270.t1 | MTR_7g011770 | 28.669 | 293 | 180 | 7 | 95 | 359 | 240 | 531 | 8.30e-21 | 97.1 |
| MS.gene54270.t1 | MTR_5g030050 | 28.409 | 264 | 156 | 7 | 100 | 339 | 3 | 257 | 1.04e-20 | 93.6 |
| MS.gene54270.t1 | MTR_5g081730 | 36.364 | 110 | 65 | 1 | 180 | 284 | 2 | 111 | 2.38e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54270.t1 | AT5G23960 | 39.564 | 551 | 318 | 7 | 40 | 583 | 3 | 545 | 2.81e-144 | 428 |
| MS.gene54270.t1 | AT5G23960 | 39.531 | 554 | 316 | 9 | 40 | 583 | 3 | 547 | 6.91e-143 | 425 |
| MS.gene54270.t1 | AT1G70080 | 37.163 | 557 | 340 | 7 | 35 | 583 | 57 | 611 | 8.13e-131 | 396 |
| MS.gene54270.t1 | AT3G14490 | 35.506 | 583 | 367 | 5 | 6 | 583 | 23 | 601 | 1.67e-126 | 384 |
| MS.gene54270.t1 | AT3G14520 | 36.229 | 541 | 335 | 5 | 49 | 583 | 68 | 604 | 4.76e-124 | 378 |
| MS.gene54270.t1 | AT1G31950 | 35.949 | 548 | 328 | 6 | 49 | 583 | 70 | 607 | 3.48e-123 | 376 |
| MS.gene54270.t1 | AT1G31950 | 36.229 | 541 | 335 | 5 | 49 | 583 | 70 | 606 | 3.09e-122 | 374 |
| MS.gene54270.t1 | AT3G14540 | 36.481 | 540 | 335 | 4 | 49 | 583 | 65 | 601 | 2.93e-121 | 371 |
| MS.gene54270.t1 | AT3G29410 | 35.466 | 547 | 339 | 5 | 44 | 583 | 64 | 603 | 7.35e-119 | 365 |
| MS.gene54270.t1 | AT3G32030 | 33.219 | 581 | 374 | 7 | 8 | 583 | 33 | 604 | 2.13e-117 | 361 |
| MS.gene54270.t1 | AT5G44630 | 35.401 | 548 | 337 | 8 | 45 | 581 | 14 | 555 | 4.98e-115 | 353 |
| MS.gene54270.t1 | AT4G20210 | 34.307 | 548 | 347 | 7 | 44 | 583 | 58 | 600 | 6.90e-115 | 354 |
| MS.gene54270.t1 | AT1G33750 | 34.206 | 535 | 346 | 4 | 51 | 583 | 73 | 603 | 7.28e-114 | 352 |
| MS.gene54270.t1 | AT3G29410 | 36.000 | 500 | 316 | 3 | 86 | 583 | 1 | 498 | 1.51e-113 | 348 |
| MS.gene54270.t1 | AT4G13300 | 35.065 | 539 | 339 | 7 | 52 | 583 | 20 | 554 | 5.92e-112 | 345 |
| MS.gene54270.t1 | AT4G20200 | 35.328 | 518 | 321 | 8 | 75 | 583 | 92 | 604 | 1.19e-110 | 343 |
| MS.gene54270.t1 | AT4G15870 | 34.935 | 541 | 326 | 10 | 52 | 583 | 75 | 598 | 2.40e-107 | 335 |
| MS.gene54270.t1 | AT4G13280 | 34.451 | 537 | 341 | 7 | 54 | 583 | 22 | 554 | 9.83e-107 | 332 |
| MS.gene54270.t1 | AT3G29190 | 33.333 | 519 | 330 | 7 | 75 | 583 | 89 | 601 | 5.02e-106 | 332 |
| MS.gene54270.t1 | AT1G31950 | 36.933 | 463 | 269 | 6 | 49 | 498 | 70 | 522 | 9.34e-105 | 326 |
| MS.gene54270.t1 | AT3G14540 | 37.892 | 446 | 270 | 3 | 49 | 490 | 65 | 507 | 4.04e-104 | 323 |
| MS.gene54270.t1 | AT4G20230 | 33.852 | 514 | 327 | 7 | 75 | 579 | 92 | 601 | 2.58e-103 | 325 |
| MS.gene54270.t1 | AT4G20230 | 33.852 | 514 | 327 | 7 | 75 | 579 | 104 | 613 | 4.30e-103 | 324 |
| MS.gene54270.t1 | AT2G23230 | 34.249 | 546 | 344 | 9 | 43 | 578 | 55 | 595 | 4.37e-101 | 319 |
| MS.gene54270.t1 | AT3G29110 | 34.191 | 544 | 349 | 8 | 44 | 581 | 55 | 595 | 1.54e-100 | 317 |
| MS.gene54270.t1 | AT2G23230 | 34.066 | 546 | 340 | 10 | 43 | 578 | 55 | 590 | 1.30e-98 | 312 |
| MS.gene54270.t1 | AT1G66020 | 32.418 | 546 | 360 | 6 | 44 | 583 | 56 | 598 | 1.71e-98 | 312 |
| MS.gene54270.t1 | AT1G48800 | 32.418 | 546 | 353 | 9 | 44 | 579 | 63 | 602 | 1.67e-95 | 304 |
| MS.gene54270.t1 | AT4G16730 | 32.413 | 543 | 344 | 10 | 55 | 581 | 2 | 537 | 3.63e-95 | 301 |
| MS.gene54270.t1 | AT4G13280 | 33.520 | 537 | 316 | 9 | 54 | 583 | 22 | 524 | 6.27e-95 | 300 |
| MS.gene54270.t1 | AT4G16730 | 32.797 | 497 | 313 | 8 | 100 | 581 | 1 | 491 | 2.60e-91 | 290 |
| MS.gene54270.t1 | AT4G16740 | 31.834 | 578 | 364 | 15 | 21 | 583 | 2 | 564 | 1.54e-88 | 285 |
| MS.gene54270.t1 | AT1G61680 | 32.265 | 499 | 326 | 4 | 81 | 573 | 77 | 569 | 9.70e-88 | 283 |
| MS.gene54270.t1 | AT2G24210 | 31.250 | 560 | 364 | 11 | 37 | 583 | 39 | 590 | 6.19e-87 | 281 |
| MS.gene54270.t1 | AT1G61680 | 31.864 | 499 | 321 | 5 | 81 | 573 | 77 | 562 | 2.93e-84 | 273 |
| MS.gene54270.t1 | AT5G48110 | 37.318 | 343 | 210 | 5 | 242 | 583 | 1 | 339 | 1.01e-83 | 265 |
| MS.gene54270.t1 | AT1G48820 | 31.169 | 539 | 321 | 11 | 44 | 576 | 63 | 557 | 1.02e-82 | 270 |
| MS.gene54270.t1 | AT3G25830 | 30.179 | 560 | 363 | 13 | 42 | 583 | 45 | 594 | 4.68e-80 | 263 |
| MS.gene54270.t1 | AT3G25820 | 30.179 | 560 | 363 | 13 | 42 | 583 | 45 | 594 | 4.68e-80 | 263 |
| MS.gene54270.t1 | AT3G25810 | 30.357 | 560 | 365 | 11 | 42 | 583 | 45 | 597 | 2.83e-79 | 261 |
| MS.gene54270.t1 | AT4G16740 | 34.414 | 401 | 239 | 10 | 21 | 408 | 2 | 391 | 5.17e-69 | 228 |
| MS.gene54270.t1 | AT1G66020 | 34.688 | 369 | 232 | 6 | 44 | 406 | 56 | 421 | 3.31e-68 | 228 |
| MS.gene54270.t1 | AT3G25820 | 32.300 | 387 | 241 | 9 | 42 | 416 | 45 | 422 | 1.15e-61 | 211 |
| MS.gene54270.t1 | AT4G16740 | 34.571 | 350 | 206 | 9 | 21 | 357 | 2 | 341 | 1.29e-58 | 200 |
| MS.gene54270.t1 | AT4G16740 | 34.571 | 350 | 206 | 9 | 21 | 357 | 2 | 341 | 1.29e-58 | 200 |
| MS.gene54270.t1 | AT3G25820 | 33.028 | 327 | 200 | 7 | 42 | 357 | 45 | 363 | 4.56e-54 | 189 |
| MS.gene54270.t1 | AT3G25820 | 33.028 | 327 | 200 | 7 | 42 | 357 | 45 | 363 | 4.56e-54 | 189 |
| MS.gene54270.t1 | AT1G79460 | 25.095 | 526 | 335 | 20 | 97 | 583 | 274 | 779 | 4.83e-32 | 132 |
| MS.gene54270.t1 | AT1G61120 | 23.228 | 508 | 362 | 9 | 95 | 583 | 286 | 784 | 8.69e-27 | 116 |
| MS.gene54270.t1 | AT4G02780 | 29.389 | 262 | 153 | 6 | 95 | 327 | 329 | 587 | 2.84e-23 | 105 |
Find 0 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAATAAACGTTAAT+AGG | - | 43198:43790-43809 | MS.gene54270:intergenic | 10.0% |
| !! | ACCAATTAAATTAATTAATT+AGG | + | 43198:40122-40141 | MS.gene54270:intron | 10.0% |
| !! | ATATATATTTATATGATTTG+TGG | - | 43198:40040-40059 | MS.gene54270:intergenic | 10.0% |
| !! | CAATTAAATTAATTAATTAG+GGG | + | 43198:40124-40143 | MS.gene54270:intron | 10.0% |
| !! | CCAATTAAATTAATTAATTA+GGG | + | 43198:40123-40142 | MS.gene54270:intron | 10.0% |
| !! | TGATTATAAACTAATATTAA+TGG | + | 43198:41771-41790 | MS.gene54270:intron | 10.0% |
| !!! | AAAAGATTTAATTTATATCT+AGG | - | 43198:40576-40595 | MS.gene54270:intergenic | 10.0% |
| !!! | AAAGATTTAATTTATATCTA+GGG | - | 43198:40575-40594 | MS.gene54270:intergenic | 10.0% |
| !!! | TATTTTTTGTCTTTATATAT+AGG | + | 43198:42430-42449 | MS.gene54270:intron | 10.0% |
| !! | AAATGAAATCTTAGATTATT+AGG | - | 43198:39933-39952 | MS.gene54270:intergenic | 15.0% |
| !! | AACTCTAATAAAATGATAAA+AGG | + | 43198:39746-39765 | MS.gene54270:intron | 15.0% |
| !! | AATTGATCTACTATAAATAT+CGG | + | 43198:40639-40658 | MS.gene54270:intron | 15.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | + | 43198:41160-41179 | MS.gene54270:CDS | 15.0% |
| !! | ACTTAATATTTCAAATGAAT+GGG | - | 43198:40730-40749 | MS.gene54270:intergenic | 15.0% |
| !! | ATAAAGACAAAAAATAGTAT+AGG | - | 43198:42426-42445 | MS.gene54270:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTATA+AGG | - | 43198:40998-41017 | MS.gene54270:intergenic | 15.0% |
| !! | CCCTAATTAATTAATTTAAT+TGG | - | 43198:40126-40145 | MS.gene54270:intergenic | 15.0% |
| !! | TAAATAATAATGAAGTGAAT+TGG | - | 43198:39974-39993 | MS.gene54270:intergenic | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | + | 43198:41582-41601 | MS.gene54270:intron | 15.0% |
| !! | TACTTAATATTTCAAATGAA+TGG | - | 43198:40731-40750 | MS.gene54270:intergenic | 15.0% |
| !! | TTAACAACATTTAATTACAT+AGG | + | 43198:43748-43767 | MS.gene54270:intron | 15.0% |
| !! | TTAATTAATTTAATTGGTCA+AGG | - | 43198:40120-40139 | MS.gene54270:intergenic | 15.0% |
| !! | TTGTAGAATTAATATTACAA+AGG | - | 43198:43665-43684 | MS.gene54270:intergenic | 15.0% |
| !!! | AAAAAATTATTTTCTATCAG+TGG | - | 43198:41612-41631 | MS.gene54270:intergenic | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | + | 43198:43284-43303 | MS.gene54270:intron | 15.0% |
| !!! | ATACTTTTATATTTTGATGT+AGG | - | 43198:42368-42387 | MS.gene54270:intergenic | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | + | 43198:41933-41952 | MS.gene54270:intron | 15.0% |
| !!! | ATTTCATTTTAAACTTTGTA+TGG | + | 43198:43183-43202 | MS.gene54270:intron | 15.0% |
| !!! | CATTTTTTATGTTTTCAATT+TGG | + | 43198:41449-41468 | MS.gene54270:intron | 15.0% |
| !!! | TTTAATTACATAGGTTTTTT+TGG | + | 43198:43757-43776 | MS.gene54270:intron | 15.0% |
| !! | AAATAGTTAGAGTCAAAAAA+AGG | + | 43198:40428-40447 | MS.gene54270:intron | 20.0% |
| !! | AAGACAATAAATAAAAGTTC+AGG | - | 43198:39708-39727 | MS.gene54270:intergenic | 20.0% |
| !! | AAGACACTTAATTATTGTTA+TGG | - | 43198:41071-41090 | MS.gene54270:intergenic | 20.0% |
| !! | AATATTAATGGTATACATGT+AGG | + | 43198:41783-41802 | MS.gene54270:intron | 20.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | + | 43198:41163-41182 | MS.gene54270:CDS | 20.0% |
| !! | ATATAAATATATATGCACAC+GGG | + | 43198:40046-40065 | MS.gene54270:intron | 20.0% |
| !! | ATTATTAGGTAAGTAAAATG+AGG | - | 43198:39919-39938 | MS.gene54270:intergenic | 20.0% |
| !! | CATATAAATATATATGCACA+CGG | + | 43198:40045-40064 | MS.gene54270:intron | 20.0% |
| !! | CATTAAATGTTTGTGATTTA+TGG | + | 43198:39641-39660 | MS.gene54270:intron | 20.0% |
| !! | GAGAATAATTAAAAGAAATG+AGG | - | 43198:41710-41729 | MS.gene54270:intergenic | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+TGG | + | 43198:43423-43442 | MS.gene54270:intron | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | 43198:42924-42943 | MS.gene54270:intron | 20.0% |
| !!! | ATTGTTTTATCTCTAAAGTT+TGG | - | 43198:42721-42740 | MS.gene54270:intergenic | 20.0% |
| !!! | TATATGTTTTGAATACATAC+AGG | + | 43198:41115-41134 | MS.gene54270:intron | 20.0% |
| !!! | TATCTTGACATTTTAATTAG+TGG | + | 43198:43691-43710 | MS.gene54270:intron | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | + | 43198:42920-42939 | MS.gene54270:intron | 20.0% |
| !!! | TTTTTGTCTTTATATATAGG+TGG | + | 43198:42433-42452 | MS.gene54270:intron | 20.0% |
| ! | AAACTTTGTATGGTTATCAA+AGG | + | 43198:43193-43212 | MS.gene54270:intron | 25.0% |
| ! | AACTTTGTATGGTTATCAAA+GGG | + | 43198:43194-43213 | MS.gene54270:intron | 25.0% |
| ! | ATGAAATCTTTGTTCAATTG+TGG | - | 43198:43170-43189 | MS.gene54270:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | - | 43198:42265-42284 | MS.gene54270:intergenic | 25.0% |
| ! | CAAAAATAAACCAAAGTTCA+TGG | - | 43198:39673-39692 | MS.gene54270:intergenic | 25.0% |
| ! | CAAACATTTAATGAAAGAAG+AGG | - | 43198:39634-39653 | MS.gene54270:intergenic | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | 43198:42592-42611 | MS.gene54270:intergenic | 25.0% |
| ! | GTTAAAGAATAAAGATCACT+GGG | + | 43198:39781-39800 | MS.gene54270:intron | 25.0% |
| ! | GTTTATGAACAAATACTACA+AGG | - | 43198:39598-39617 | MS.gene54270:intergenic | 25.0% |
| ! | TAATAACATAGACATCTTAG+TGG | + | 43198:40386-40405 | MS.gene54270:intron | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | 43198:42265-42284 | MS.gene54270:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | 43198:41311-41330 | MS.gene54270:CDS | 25.0% |
| ! | TGCAAAAAACTTATTATCCA+TGG | + | 43198:43579-43598 | MS.gene54270:intron | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | - | 43198:42264-42283 | MS.gene54270:intergenic | 25.0% |
| ! | TGTTAAAGAATAAAGATCAC+TGG | + | 43198:39780-39799 | MS.gene54270:intron | 25.0% |
| ! | TTGAGTAAAACAAATTAGAG+TGG | + | 43198:41480-41499 | MS.gene54270:intron | 25.0% |
| !! | AATAAGTTGAGATATATACC+AGG | - | 43198:41416-41435 | MS.gene54270:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | 43198:41280-41299 | MS.gene54270:CDS | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | + | 43198:41553-41572 | MS.gene54270:intron | 25.0% |
| !! | TCATGAAGATACATTTTTCT+TGG | - | 43198:43345-43364 | MS.gene54270:intergenic | 25.0% |
| !! | TGAATTAGAACTTTTTACTC+AGG | + | 43198:42638-42657 | MS.gene54270:CDS | 25.0% |
| !! | TTCTTTTAACAATAGAGCAA+TGG | + | 43198:42891-42910 | MS.gene54270:intron | 25.0% |
| !!! | AACATGTGTTTAACTTTTCT+TGG | + | 43198:40509-40528 | MS.gene54270:intron | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | - | 43198:43070-43089 | MS.gene54270:intergenic | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | - | 43198:43069-43088 | MS.gene54270:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | + | 43198:42923-42942 | MS.gene54270:intron | 25.0% |
| !!! | GATTTAGATTGAGTTTTGTT+AGG | - | 43198:40177-40196 | MS.gene54270:intergenic | 25.0% |
| !!! | TATCCATGGTTTTATTAACT+CGG | + | 43198:43437-43456 | MS.gene54270:intron | 25.0% |
| AAAAGAAAATTGACAACGCT+TGG | + | 43198:44277-44296 | MS.gene54270:CDS | 30.0% | |
| AAATGTGAGTAACTTGAATC+TGG | - | 43198:40974-40993 | MS.gene54270:intergenic | 30.0% | |
| AATGTGAGTAACTTGAATCT+GGG | - | 43198:40973-40992 | MS.gene54270:intergenic | 30.0% | |
| AATTTACCCATCTTCTATCT+TGG | + | 43198:42803-42822 | MS.gene54270:intron | 30.0% | |
| ATATTGGGGCTCAAAATATA+CGG | - | 43198:42535-42554 | MS.gene54270:intergenic | 30.0% | |
| ATCCATATTCCATGGTATAA+AGG | - | 43198:39874-39893 | MS.gene54270:intergenic | 30.0% | |
| ATGTGAACATTACACAGATA+AGG | - | 43198:41687-41706 | MS.gene54270:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | + | 43198:43906-43925 | MS.gene54270:CDS | 30.0% | |
| CATCAATCCTAATGAGAAAT+CGG | + | 43198:40767-40786 | MS.gene54270:CDS | 30.0% | |
| CTACTTCACAACTTTATCTT+TGG | + | 43198:40243-40262 | MS.gene54270:intron | 30.0% | |
| GAACAAGAAATGAAGAAAGA+AGG | + | 43198:43024-43043 | MS.gene54270:CDS | 30.0% | |
| GAGGGAATATGATTTGAATA+GGG | + | 43198:44233-44252 | MS.gene54270:CDS | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | + | 43198:42076-42095 | MS.gene54270:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | + | 43198:44215-44234 | MS.gene54270:CDS | 30.0% | |
| TAACTATATACCAACAACAG+AGG | + | 43198:43875-43894 | MS.gene54270:CDS | 30.0% | |
| TGAGGGAATATGATTTGAAT+AGG | + | 43198:44232-44251 | MS.gene54270:CDS | 30.0% | |
| TGGGATGCTTAATTAATCAA+TGG | - | 43198:40711-40730 | MS.gene54270:intergenic | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | 43198:42082-42101 | MS.gene54270:CDS | 30.0% | |
| TTAATCGCAACTTTAAGCTT+AGG | + | 43198:40275-40294 | MS.gene54270:intron | 30.0% | |
| TTGTCTTTATATATAGGTGG+TGG | + | 43198:42436-42455 | MS.gene54270:intron | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | 43198:42550-42569 | MS.gene54270:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATGACT+TGG | + | 43198:43319-43338 | MS.gene54270:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | 43198:41239-41258 | MS.gene54270:CDS | 30.0% |
| ! | ATTTCTACCATCGTTTGTTT+TGG | + | 43198:39844-39863 | MS.gene54270:intron | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | + | 43198:41552-41571 | MS.gene54270:intron | 30.0% |
| ! | GAACAAATACTACAAGGTTT+TGG | - | 43198:39592-39611 | MS.gene54270:intergenic | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | 43198:42984-43003 | MS.gene54270:CDS | 30.0% |
| ! | TTCCAAATTCCTTTTGATGT+AGG | - | 43198:42319-42338 | MS.gene54270:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | - | 43198:44265-44284 | MS.gene54270:intergenic | 30.0% |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | - | 43198:42551-42570 | MS.gene54270:intergenic | 30.0% |
| ! | TTTTGCTAAATGCAGTTCAT+AGG | + | 43198:41040-41059 | MS.gene54270:intron | 30.0% |
| ! | TTTTTACTCAGGCAATTGAA+AGG | + | 43198:42649-42668 | MS.gene54270:CDS | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | - | 43198:44278-44297 | MS.gene54270:intergenic | 30.0% |
| !! | AATAGTGATTGAAGAGTACT+AGG | + | 43198:40910-40929 | MS.gene54270:intron | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | - | 43198:43068-43087 | MS.gene54270:intergenic | 30.0% |
| !! | TGTTTCTGAAGTACGAAAAA+GGG | - | 43198:41825-41844 | MS.gene54270:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | - | 43198:41222-41241 | MS.gene54270:intergenic | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | + | 43198:42503-42522 | MS.gene54270:CDS | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | - | 43198:41221-41240 | MS.gene54270:intergenic | 30.0% |
| AACTTCAGTGAAACATTGGT+CGG | + | 43198:42008-42027 | MS.gene54270:CDS | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | + | 43198:43836-43855 | MS.gene54270:CDS | 35.0% | |
| ACACACGTAAGAATAGGTAA+CGG | - | 43198:44342-44361 | MS.gene54270:intergenic | 35.0% | |
| ACATGATACTTCCTAGTAAG+TGG | + | 43198:40312-40331 | MS.gene54270:CDS | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | + | 43198:43945-43964 | MS.gene54270:CDS | 35.0% | |
| AGATGTGTTCAACCAATTCA+AGG | + | 43198:41974-41993 | MS.gene54270:intron | 35.0% | |
| AGCCTACATCAAAAGGAATT+TGG | + | 43198:42314-42333 | MS.gene54270:CDS | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | + | 43198:42004-42023 | MS.gene54270:CDS | 35.0% | |
| AGGCTAGACAATTTACGTAT+AGG | + | 43198:40448-40467 | MS.gene54270:intron | 35.0% | |
| ATGGAATTGACCATGAACTT+TGG | + | 43198:39660-39679 | MS.gene54270:intron | 35.0% | |
| ATGGTAGAAATAAGAGGAGA+AGG | - | 43198:39835-39854 | MS.gene54270:intergenic | 35.0% | |
| ATTGTAGCATCCATATTCCA+TGG | - | 43198:39882-39901 | MS.gene54270:intergenic | 35.0% | |
| CAAACGATGGTAGAAATAAG+AGG | - | 43198:39841-39860 | MS.gene54270:intergenic | 35.0% | |
| CATGATACTTCCTAGTAAGT+GGG | + | 43198:40313-40332 | MS.gene54270:CDS | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | + | 43198:44293-44312 | MS.gene54270:CDS | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | + | 43198:44214-44233 | MS.gene54270:CDS | 35.0% | |
| GAACCGAGTTAATAAAACCA+TGG | - | 43198:43443-43462 | MS.gene54270:intergenic | 35.0% | |
| GAACTGAGTTCATATAACCA+TGG | - | 43198:43599-43618 | MS.gene54270:intergenic | 35.0% | |
| GAATCTGGGCTAATATTAAG+TGG | - | 43198:40959-40978 | MS.gene54270:intergenic | 35.0% | |
| GACAAAAGACATCTTTGACT+GGG | + | 43198:43977-43996 | MS.gene54270:CDS | 35.0% | |
| GATGACACATATGATGCATA+TGG | + | 43198:42606-42625 | MS.gene54270:CDS | 35.0% | |
| GGCTAGACAATTTACGTATA+GGG | + | 43198:40449-40468 | MS.gene54270:intron | 35.0% | |
| TAAAGCAACTTCGTGTAATC+CGG | - | 43198:42973-42992 | MS.gene54270:intergenic | 35.0% | |
| TAAGTAAAATGAGGTGAGCT+GGG | - | 43198:39910-39929 | MS.gene54270:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | + | 43198:43944-43963 | MS.gene54270:CDS | 35.0% | |
| TACTCTTGTAAGTTCCTGTT+TGG | - | 43198:40365-40384 | MS.gene54270:intergenic | 35.0% | |
| TAGCAACCAAGATAGAAGAT+GGG | - | 43198:42812-42831 | MS.gene54270:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | + | 43198:42939-42958 | MS.gene54270:intron | 35.0% | |
| TCCTTATGCTTCAGAATCTA+TGG | + | 43198:40845-40864 | MS.gene54270:CDS | 35.0% | |
| TCTTCTTCAACTCTATGGTT+TGG | - | 43198:40687-40706 | MS.gene54270:intergenic | 35.0% | |
| TGCCTTTATACCATGGAATA+TGG | + | 43198:39869-39888 | MS.gene54270:intron | 35.0% | |
| TGGTTATCAAAGGGAAGTTT+AGG | + | 43198:43203-43222 | MS.gene54270:intron | 35.0% | |
| TTAGCAACCAAGATAGAAGA+TGG | - | 43198:42813-42832 | MS.gene54270:intergenic | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | - | 43198:42549-42568 | MS.gene54270:intergenic | 35.0% | |
| TTGAGAACACACGTAAGAAT+AGG | - | 43198:44348-44367 | MS.gene54270:intergenic | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | 43198:42158-42177 | MS.gene54270:intergenic | 35.0% | |
| TTTGGTATGCCTTTATACCA+TGG | + | 43198:39862-39881 | MS.gene54270:intron | 35.0% | |
| ! | AAAAATATTGGAAGAGGCGT+TGG | + | 43198:42088-42107 | MS.gene54270:CDS | 35.0% |
| ! | ATTCCTTTTGATGTAGGCTT+TGG | - | 43198:42313-42332 | MS.gene54270:intergenic | 35.0% |
| ! | CTAGTCATCAAGTTTAGAGT+TGG | + | 43198:42759-42778 | MS.gene54270:intron | 35.0% |
| ! | GATTGACTCAATATGTCGTT+TGG | + | 43198:41238-41257 | MS.gene54270:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | - | 43198:44014-44033 | MS.gene54270:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | 43198:42274-42293 | MS.gene54270:CDS | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | 43198:40777-40796 | MS.gene54270:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTCATTA+TGG | - | 43198:43331-43350 | MS.gene54270:intergenic | 35.0% |
| !! | AAAAGCCTTGTTCATAACTG+TGG | + | 43198:40338-40357 | MS.gene54270:CDS | 35.0% |
| !! | ACCATAGATTCTGAAGCATA+AGG | - | 43198:40849-40868 | MS.gene54270:intergenic | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | + | 43198:41360-41379 | MS.gene54270:CDS | 35.0% |
| !! | CTTTATATATAGGTGGTGGA+AGG | + | 43198:42440-42459 | MS.gene54270:intron | 35.0% |
| !! | GTGTTTCTGAAGTACGAAAA+AGG | - | 43198:41826-41845 | MS.gene54270:intergenic | 35.0% |
| !! | TTCAACTCTATGGTTTGGTT+GGG | - | 43198:40682-40701 | MS.gene54270:intergenic | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | + | 43198:41361-41380 | MS.gene54270:CDS | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | - | 43198:43061-43080 | MS.gene54270:intergenic | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | + | 43198:42502-42521 | MS.gene54270:CDS | 35.0% |
| AAAAAATCTCCCCAAACGCT+AGG | - | 43198:40822-40841 | MS.gene54269:intergenic | 40.0% | |
| AAAAATCTCCCCAAACGCTA+GGG | - | 43198:40821-40840 | MS.gene54269:intergenic | 40.0% | |
| AAACAGTTTGAGCAGAAACG+AGG | + | 43198:44180-44199 | MS.gene54270:intron | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | 43198:42066-42085 | MS.gene54270:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | - | 43198:42489-42508 | MS.gene54270:intergenic | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | + | 43198:44200-44219 | MS.gene54270:CDS | 40.0% | |
| AGGCATACCAAAACAAACGA+TGG | - | 43198:39854-39873 | MS.gene54270:intergenic | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | - | 43198:41358-41377 | MS.gene54270:intergenic | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | - | 43198:43862-43881 | MS.gene54270:intergenic | 40.0% | |
| ATGAAGTGAATTGGCGTGAA+AGG | - | 43198:39965-39984 | MS.gene54270:intergenic | 40.0% | |
| ATGGCTCTTCTTCAACTCTA+TGG | - | 43198:40692-40711 | MS.gene54270:intergenic | 40.0% | |
| CGACAAAAGACATCTTTGAC+TGG | + | 43198:43976-43995 | MS.gene54270:CDS | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | + | 43198:41202-41221 | MS.gene54270:CDS | 40.0% | |
| GATAACTACACACACTCTGA+CGG | + | 43198:44405-44424 | MS.gene54270:CDS | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | 43198:41136-41155 | MS.gene54270:intron | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | - | 43198:42243-42262 | MS.gene54270:intergenic | 40.0% | |
| GTAAGTAAAATGAGGTGAGC+TGG | - | 43198:39911-39930 | MS.gene54270:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | 43198:42055-42074 | MS.gene54270:CDS | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | 43198:42942-42961 | MS.gene54270:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | + | 43198:42951-42970 | MS.gene54270:CDS | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | + | 43198:44031-44050 | MS.gene54270:CDS | 40.0% | |
| TTCATAACTGTGGACCAAAC+AGG | + | 43198:40348-40367 | MS.gene54270:CDS | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | - | 43198:42148-42167 | MS.gene54270:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | + | 43198:43939-43958 | MS.gene54270:CDS | 40.0% | |
| TTGGTCCACAGTTATGAACA+AGG | - | 43198:40346-40365 | MS.gene54270:intergenic | 40.0% | |
| !! | AGGAGTGTCTTTCGTTTGAT+CGG | + | 43198:41644-41663 | MS.gene54270:intron | 40.0% |
| !! | ATAGGTAACGGAACTTCAGT+TGG | - | 43198:44330-44349 | MS.gene54270:intergenic | 40.0% |
| !! | CAATCTCTCGCGTTTTATTG+AGG | + | 43198:44365-44384 | MS.gene54270:CDS | 40.0% |
| !! | CTTCAACTCTATGGTTTGGT+TGG | - | 43198:40683-40702 | MS.gene54270:intergenic | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | - | 43198:43062-43081 | MS.gene54270:intergenic | 40.0% |
| !! | TCAACTCTATGGTTTGGTTG+GGG | - | 43198:40681-40700 | MS.gene54270:intergenic | 40.0% |
| AACATTGGTCGGAGATGTTG+AGG | + | 43198:42019-42038 | MS.gene54270:CDS | 45.0% | |
| AACCAATTCAAGGACGAGCA+AGG | + | 43198:41984-42003 | MS.gene54270:CDS | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | - | 43198:43935-43954 | MS.gene54270:intergenic | 45.0% | |
| ACATTGGTCGGAGATGTTGA+GGG | + | 43198:42020-42039 | MS.gene54270:CDS | 45.0% | |
| AGATTTCCACCCTAGCGTTT+GGG | + | 43198:40809-40828 | MS.gene54270:CDS | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | + | 43198:42544-42563 | MS.gene54270:CDS | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | + | 43198:43920-43939 | MS.gene54270:CDS | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | + | 43198:44024-44043 | MS.gene54270:CDS | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | + | 43198:42202-42221 | MS.gene54270:CDS | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | + | 43198:41395-41414 | MS.gene54270:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | + | 43198:44030-44049 | MS.gene54270:CDS | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | + | 43198:43844-43863 | MS.gene54270:CDS | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | 43198:42062-42081 | MS.gene54270:CDS | 45.0% | |
| GCTCCAAAGCCTACATCAAA+AGG | + | 43198:42307-42326 | MS.gene54270:CDS | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | + | 43198:44052-44071 | MS.gene54270:CDS | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | - | 43198:43936-43955 | MS.gene54270:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | - | 43198:42147-42166 | MS.gene54270:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | - | 43198:43888-43907 | MS.gene54270:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | - | 43198:43842-43861 | MS.gene54270:intergenic | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | 43198:41143-41162 | MS.gene54270:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | 43198:41989-42008 | MS.gene54270:intergenic | 45.0% | |
| ! | AGGCTTTTCACCCACTTACT+AGG | - | 43198:40326-40345 | MS.gene54270:intergenic | 45.0% |
| ! | TAACTTCTTGCCACTAGCCT+AGG | - | 43198:42215-42234 | MS.gene54270:intergenic | 45.0% |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | + | 43198:42446-42465 | MS.gene54270:intron | 45.0% |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | + | 43198:41369-41388 | MS.gene54270:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | + | 43198:41377-41396 | MS.gene54270:CDS | 45.0% |
| !!! | AATTTTTTTTTACATAAAAT+AGG | + | 43198:41624-41643 | MS.gene54270:intron | 5.0% |
| AAGAGAAGGACTCAATCGGG+TGG | - | 43198:42144-42163 | MS.gene54270:intergenic | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | + | 43198:40808-40827 | MS.gene54270:CDS | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | + | 43198:42195-42214 | MS.gene54270:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | 43198:40810-40829 | MS.gene54270:CDS | 50.0% | |
| TTCTGGTCACCTTGAGTCCA+TGG | + | 43198:42118-42137 | MS.gene54270:CDS | 50.0% | |
| ! | GGTTTGGTTGGGGAAAGAAG+AGG | - | 43198:40671-40690 | MS.gene54270:intergenic | 50.0% |
| !!! | GAGGCGTTGGCTTTTACTTC+TGG | + | 43198:42101-42120 | MS.gene54270:CDS | 50.0% |
| AATCTCCCCAAACGCTAGGG+TGG | - | 43198:40818-40837 | MS.gene54270:intergenic | 55.0% | |
| AGGACTCAATCGGGTGGCCA+TGG | - | 43198:42138-42157 | MS.gene54270:intergenic | 60.0% | |
| ATCGGGTGGCCATGGACTCA+AGG | - | 43198:42130-42149 | MS.gene54270:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 43198 | gene | 39507 | 44479 | 39507 | ID=MS.gene54270 |
| 43198 | mRNA | 39507 | 44479 | 39507 | ID=MS.gene54270.t1;Parent=MS.gene54270 |
| 43198 | exon | 39507 | 39514 | 39507 | ID=MS.gene54270.t1.exon1;Parent=MS.gene54270.t1 |
| 43198 | CDS | 39507 | 39514 | 39507 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 40310 | 40381 | 40310 | ID=MS.gene54270.t1.exon2;Parent=MS.gene54270.t1 |
| 43198 | CDS | 40310 | 40381 | 40310 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 40749 | 40866 | 40749 | ID=MS.gene54270.t1.exon3;Parent=MS.gene54270.t1 |
| 43198 | CDS | 40749 | 40866 | 40749 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 41137 | 41416 | 41137 | ID=MS.gene54270.t1.exon4;Parent=MS.gene54270.t1 |
| 43198 | CDS | 41137 | 41416 | 41137 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 41976 | 42348 | 41976 | ID=MS.gene54270.t1.exon5;Parent=MS.gene54270.t1 |
| 43198 | CDS | 41976 | 42348 | 41976 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 42452 | 42670 | 42452 | ID=MS.gene54270.t1.exon6;Parent=MS.gene54270.t1 |
| 43198 | CDS | 42452 | 42670 | 42452 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 42942 | 43080 | 42942 | ID=MS.gene54270.t1.exon7;Parent=MS.gene54270.t1 |
| 43198 | CDS | 42942 | 43080 | 42942 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 43825 | 44073 | 43825 | ID=MS.gene54270.t1.exon8;Parent=MS.gene54270.t1 |
| 43198 | CDS | 43825 | 44073 | 43825 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| 43198 | exon | 44186 | 44479 | 44186 | ID=MS.gene54270.t1.exon9;Parent=MS.gene54270.t1 |
| 43198 | CDS | 44186 | 44479 | 44186 | ID=cds.MS.gene54270.t1;Parent=MS.gene54270.t1 |
| Gene Sequence |
| Protein sequence |
