Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060120.t1 | XP_004497487.1 | 70.5 | 549 | 162 | 0 | 3 | 551 | 8 | 556 | 3.20E-230 | 807.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060120.t1 | B9SCB6 | 50.4 | 544 | 266 | 2 | 5 | 548 | 10 | 549 | 3.2e-162 | 573.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060120.t1 | A0A1S2Y0Q7 | 70.5 | 549 | 162 | 0 | 3 | 551 | 8 | 556 | 2.3e-230 | 807.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060118 | MS.gene060120 | 0.90519 | 5.57E-80 | -1.69E-46 |
| MS.gene060119 | MS.gene060120 | 0.972583 | 5.29E-135 | -1.69E-46 |
| MS.gene060120 | MS.gene068432 | 0.850564 | 1.56E-60 | -1.69E-46 |
| MS.gene060120 | MS.gene068435 | 0.824757 | 6.79E-54 | -1.69E-46 |
| MS.gene060120 | MS.gene068436 | 0.811826 | 5.77E-51 | -1.69E-46 |
| MS.gene060120 | MS.gene54262 | 0.848692 | 5.21E-60 | -1.69E-46 |
| MS.gene060120 | MS.gene54263 | 0.87718 | 7.72E-69 | -1.69E-46 |
| MS.gene060120 | MS.gene54264 | 0.943865 | 5.55E-103 | -1.69E-46 |
| MS.gene060120 | MS.gene54265 | 0.816529 | 5.28E-52 | -1.69E-46 |
| MS.gene060120 | MS.gene54266 | 0.893301 | 7.14E-75 | -1.69E-46 |
| MS.gene060120 | MS.gene54267 | 0.926945 | 2.33E-91 | -1.69E-46 |
| MS.gene060120 | MS.gene54268 | 0.937085 | 6.13E-98 | -1.69E-46 |
| MS.gene060120 | MS.gene54269 | 0.802947 | 4.41E-49 | -1.69E-46 |
| MS.gene060120 | MS.gene54270 | 0.829248 | 5.72E-55 | -1.69E-46 |
| MS.gene060120 | MS.gene88992 | 0.975274 | 1.18E-139 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAATAAACGTTAAT+AGG | + | 43200:9342-9361 | MS.gene060120:intergenic | 10.0% |
| !! | TGATTATAAACTAATATTAA+TGG | - | 43200:7323-7342 | MS.gene060120:intron | 10.0% |
| !!! | CTTTTTTTATGTTTTTAATT+TGG | - | 43200:6954-6973 | MS.gene060120:intron | 10.0% |
| !!! | TATTTTTTGTCTTTATATAT+AGG | - | 43200:7982-8001 | MS.gene060120:intron | 10.0% |
| !! | AATTGATAAACTAAAAAAGA+AGG | - | 43200:6668-6687 | MS.gene060120:intron | 15.0% |
| !! | ATAAAGACAAAAAATAGTAT+AGG | + | 43200:7978-7997 | MS.gene060120:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTATA+AGG | + | 43200:6503-6522 | MS.gene060120:intergenic | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | - | 43200:7085-7104 | MS.gene060120:intron | 15.0% |
| !! | TTAACAACATTTAATTACAT+AGG | - | 43200:9300-9319 | MS.gene060120:intron | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | - | 43200:8836-8855 | MS.gene060120:intron | 15.0% |
| !!! | ATACTTTTATATTTTGATGT+AGG | + | 43200:7920-7939 | MS.gene060120:intergenic | 15.0% |
| !!! | ATTGTTGTTTAATATTATTG+TGG | - | 43200:7485-7504 | MS.gene060120:intron | 15.0% |
| !!! | ATTTCATTTTAAACTTTGTA+TGG | - | 43200:8735-8754 | MS.gene060120:CDS | 15.0% |
| !! | AAGAAAAATGTATCATCATT+AGG | - | 43200:9051-9070 | MS.gene060120:intron | 20.0% |
| !! | AAGACACTTAATTATTGTTA+TGG | + | 43200:6576-6595 | MS.gene060120:intergenic | 20.0% |
| !! | AATATTAATGGTATACATGT+AGG | - | 43200:7335-7354 | MS.gene060120:intron | 20.0% |
| !! | GAGAATAATTAAAAGAAATG+AGG | + | 43200:7261-7280 | MS.gene060120:intergenic | 20.0% |
| !! | TGTAAAAAACTTATTATCCA+CGG | - | 43200:8975-8994 | MS.gene060120:intron | 20.0% |
| !! | TTGCAGAATTAATATTACAA+AGG | + | 43200:9217-9236 | MS.gene060120:intergenic | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | - | 43200:8476-8495 | MS.gene060120:CDS | 20.0% |
| !!! | ATTGTTTTATCTCTAAAGTT+TGG | + | 43200:8273-8292 | MS.gene060120:intergenic | 20.0% |
| !!! | CTTTTTACTAAAAGATTTAC+AGG | + | 43200:7125-7144 | MS.gene060120:intergenic | 20.0% |
| !!! | TATATGTTTTGAATACATAC+AGG | - | 43200:6620-6639 | MS.gene060120:intron | 20.0% |
| !!! | TATCTTGACATTTTAATTAG+TGG | - | 43200:9243-9262 | MS.gene060120:intron | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | - | 43200:8472-8491 | MS.gene060120:CDS | 20.0% |
| !!! | TTTTTGTCTTTATATATAGG+TGG | - | 43200:7985-8004 | MS.gene060120:intron | 20.0% |
| ! | AAACTTTGTATGGTTATCAA+AGG | - | 43200:8745-8764 | MS.gene060120:CDS | 25.0% |
| ! | AACTTTGTATGGTTATCAAA+GGG | - | 43200:8746-8765 | MS.gene060120:CDS | 25.0% |
| ! | ATGAAATCTTTGTTCAATTG+TGG | + | 43200:8722-8741 | MS.gene060120:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | + | 43200:7817-7836 | MS.gene060120:intergenic | 25.0% |
| ! | ATTGAGTAAACAAATTAGAG+TGG | - | 43200:6984-7003 | MS.gene060120:intron | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | 43200:8144-8163 | MS.gene060120:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | - | 43200:7817-7836 | MS.gene060120:intron | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | - | 43200:6816-6835 | MS.gene060120:CDS | 25.0% |
| ! | TGCAAAAAACTTATTATCCA+TGG | - | 43200:9131-9150 | MS.gene060120:intron | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | + | 43200:7816-7835 | MS.gene060120:intergenic | 25.0% |
| !! | AATAAGTTGAGATATATACC+AGG | + | 43200:6921-6940 | MS.gene060120:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | - | 43200:6785-6804 | MS.gene060120:CDS | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | - | 43200:7056-7075 | MS.gene060120:intron | 25.0% |
| !! | TCATGAAGATACATTTTTCT+TGG | + | 43200:8897-8916 | MS.gene060120:intergenic | 25.0% |
| !! | TGAATTAGAACTTTTTACTC+AGG | - | 43200:8190-8209 | MS.gene060120:CDS | 25.0% |
| !! | TTCTTTTAACAATAGAGCAA+TGG | - | 43200:8443-8462 | MS.gene060120:CDS | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | + | 43200:8622-8641 | MS.gene060120:intergenic | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | + | 43200:8621-8640 | MS.gene060120:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | - | 43200:8475-8494 | MS.gene060120:CDS | 25.0% |
| AAAAGAAAATTGACAACGCT+TGG | - | 43200:9829-9848 | MS.gene060120:intron | 30.0% | |
| AAATGTGAGTAACTTGAATC+TGG | + | 43200:6479-6498 | MS.gene060120:intergenic | 30.0% | |
| AATGTGAGTAACTTGAATCT+GGG | + | 43200:6478-6497 | MS.gene060120:intergenic | 30.0% | |
| AATTTACCCATCTTCAATCT+TGG | - | 43200:8355-8374 | MS.gene060120:intron | 30.0% | |
| ATATTGGGGCTCAAAATATA+CGG | + | 43200:8087-8106 | MS.gene060120:intergenic | 30.0% | |
| ATGTGAACATTACACAGATA+AGG | + | 43200:7238-7257 | MS.gene060120:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | - | 43200:9458-9477 | MS.gene060120:CDS | 30.0% | |
| CATCAATCCTAATGAGAAAT+CGG | - | 43200:6272-6291 | MS.gene060120:CDS | 30.0% | |
| GAACAAGAAATGAAGAAAGA+AGG | - | 43200:8576-8595 | MS.gene060120:CDS | 30.0% | |
| GAGGGAATATGATTTGAATA+GGG | - | 43200:9785-9804 | MS.gene060120:intron | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | - | 43200:7628-7647 | MS.gene060120:intron | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | - | 43200:9767-9786 | MS.gene060120:intron | 30.0% | |
| TAACTATATACCAACAACAG+AGG | - | 43200:9427-9446 | MS.gene060120:CDS | 30.0% | |
| TGAGGGAATATGATTTGAAT+AGG | - | 43200:9784-9803 | MS.gene060120:intron | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | - | 43200:7634-7653 | MS.gene060120:intron | 30.0% | |
| TTGTCTTTATATATAGGTGG+TGG | - | 43200:7988-8007 | MS.gene060120:intron | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | + | 43200:8102-8121 | MS.gene060120:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATGACT+TGG | - | 43200:8871-8890 | MS.gene060120:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | - | 43200:6744-6763 | MS.gene060120:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | - | 43200:7055-7074 | MS.gene060120:intron | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | - | 43200:8536-8555 | MS.gene060120:CDS | 30.0% |
| ! | TTCCAAATTCCTTTTGATGT+AGG | + | 43200:7871-7890 | MS.gene060120:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | + | 43200:9817-9836 | MS.gene060120:intergenic | 30.0% |
| ! | TTTTCCTTGCTTGAGAATAT+TGG | + | 43200:8103-8122 | MS.gene060120:intergenic | 30.0% |
| ! | TTTTGCTAAATGCAGTTCAT+AGG | - | 43200:6545-6564 | MS.gene060120:intron | 30.0% |
| ! | TTTTTACTCAGGCAATTGAA+AGG | - | 43200:8201-8220 | MS.gene060120:CDS | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | + | 43200:9830-9849 | MS.gene060120:intergenic | 30.0% |
| !! | AATAGTGATTGAAGAGTACT+AGG | - | 43200:6415-6434 | MS.gene060120:CDS | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | + | 43200:8620-8639 | MS.gene060120:intergenic | 30.0% |
| !! | TGTTTCTGAAGTACGAAAAA+GGG | + | 43200:7377-7396 | MS.gene060120:intergenic | 30.0% |
| !!! | AATCAAGTTGACTTTTTCCA+AGG | + | 43200:6727-6746 | MS.gene060120:intergenic | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | 43200:8055-8074 | MS.gene060120:intron | 30.0% |
| !!! | ATCAAGTTGACTTTTTCCAA+GGG | + | 43200:6726-6745 | MS.gene060120:intergenic | 30.0% |
| !!! | TATCCACGGTTTTATTAACT+CGG | - | 43200:8989-9008 | MS.gene060120:intron | 30.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | - | 43200:9732-9751 | MS.gene060120:intron | 35.0% | |
| AAAGATTTACAGGCTAACAG+TGG | + | 43200:7115-7134 | MS.gene060120:intergenic | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | - | 43200:9388-9407 | MS.gene060120:CDS | 35.0% | |
| ACACACGTAAGAATAGGTAA+TGG | + | 43200:9894-9913 | MS.gene060120:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | - | 43200:9497-9516 | MS.gene060120:CDS | 35.0% | |
| AGATGTGTTCAACCAATTCA+AGG | - | 43200:7526-7545 | MS.gene060120:intron | 35.0% | |
| AGCCTACATCAAAAGGAATT+TGG | - | 43200:7866-7885 | MS.gene060120:intron | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | - | 43200:7556-7575 | MS.gene060120:intron | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | - | 43200:9845-9864 | MS.gene060120:intron | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | - | 43200:9766-9785 | MS.gene060120:intron | 35.0% | |
| GAACTGAGTTCATATAACCA+TGG | + | 43200:9151-9170 | MS.gene060120:intergenic | 35.0% | |
| GAATCTGGGCTAATATTAAG+TGG | + | 43200:6464-6483 | MS.gene060120:intergenic | 35.0% | |
| GACAAAAGACATCTTTGACT+GGG | - | 43200:9529-9548 | MS.gene060120:CDS | 35.0% | |
| GATGACACATATGATGCATA+TGG | - | 43200:8158-8177 | MS.gene060120:CDS | 35.0% | |
| TAAAGCAACTTCGTGTAATC+CGG | + | 43200:8525-8544 | MS.gene060120:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | - | 43200:9496-9515 | MS.gene060120:CDS | 35.0% | |
| TAGCAACCAAGATTGAAGAT+GGG | + | 43200:8364-8383 | MS.gene060120:intergenic | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | - | 43200:8491-8510 | MS.gene060120:CDS | 35.0% | |
| TCCTTATGCTTCAGAATCTA+TGG | - | 43200:6350-6369 | MS.gene060120:CDS | 35.0% | |
| TGGTTATCAAAGGGAAGTTT+AGG | - | 43200:8755-8774 | MS.gene060120:intron | 35.0% | |
| TTAGCAACCAAGATTGAAGA+TGG | + | 43200:8365-8384 | MS.gene060120:intergenic | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | + | 43200:8101-8120 | MS.gene060120:intergenic | 35.0% | |
| TTGAGAACACACGTAAGAAT+AGG | + | 43200:9900-9919 | MS.gene060120:intergenic | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | + | 43200:7710-7729 | MS.gene060120:intergenic | 35.0% | |
| ! | AAAAATATTGGAAGAGGCGT+TGG | - | 43200:7640-7659 | MS.gene060120:intron | 35.0% |
| ! | ATTCCTTTTGATGTAGGCTT+TGG | + | 43200:7865-7884 | MS.gene060120:intergenic | 35.0% |
| ! | CTAGTCATCAAGTTTAGAGT+TGG | - | 43200:8311-8330 | MS.gene060120:intron | 35.0% |
| ! | GATTGACTCAATATGTCGTT+TGG | - | 43200:6743-6762 | MS.gene060120:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | + | 43200:9566-9585 | MS.gene060120:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | - | 43200:7826-7845 | MS.gene060120:intron | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | + | 43200:6282-6301 | MS.gene060120:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTCATTA+TGG | + | 43200:8883-8902 | MS.gene060120:intergenic | 35.0% |
| !! | ACCATAGATTCTGAAGCATA+AGG | + | 43200:6354-6373 | MS.gene060120:intergenic | 35.0% |
| !! | ATAGGTAATGGAACTTCAGT+TGG | + | 43200:9882-9901 | MS.gene060120:intergenic | 35.0% |
| !! | ATTCTCTTGCTGTGCTATTT+AGG | - | 43200:6865-6884 | MS.gene060120:CDS | 35.0% |
| !! | CTTTATATATAGGTGGTGGA+AGG | - | 43200:7992-8011 | MS.gene060120:intron | 35.0% |
| !! | GTGTTTCTGAAGTACGAAAA+AGG | + | 43200:7378-7397 | MS.gene060120:intergenic | 35.0% |
| !! | TTCTCTTGCTGTGCTATTTA+GGG | - | 43200:6866-6885 | MS.gene060120:CDS | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | + | 43200:8613-8632 | MS.gene060120:intergenic | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | 43200:8054-8073 | MS.gene060120:intron | 35.0% |
| AAAAAATCTCCCCAAACGCT+AGG | + | 43200:6327-6346 | None:intergenic | 40.0% | |
| AAAAATCTCCCCAAACGCTA+GGG | + | 43200:6326-6345 | None:intergenic | 40.0% | |
| AACATTGGTCAGAGATGTTG+AGG | - | 43200:7571-7590 | MS.gene060120:intron | 40.0% | |
| ACATTGGTCAGAGATGTTGA+GGG | - | 43200:7572-7591 | MS.gene060120:intron | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | + | 43200:7618-7637 | MS.gene060120:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | + | 43200:8041-8060 | MS.gene060120:intergenic | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | - | 43200:9752-9771 | MS.gene060120:intron | 40.0% | |
| ATAGCACAGCAAGAGAATGA+AGG | + | 43200:6863-6882 | MS.gene060120:intergenic | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | + | 43200:9414-9433 | MS.gene060120:intergenic | 40.0% | |
| CGACAAAAGACATCTTTGAC+TGG | - | 43200:9528-9547 | MS.gene060120:CDS | 40.0% | |
| CTCAAAAACAGAGAAACCCT+TGG | - | 43200:6707-6726 | MS.gene060120:CDS | 40.0% | |
| GAACCGAGTTAATAAAACCG+TGG | + | 43200:8995-9014 | MS.gene060120:intergenic | 40.0% | |
| GATAACTACACACACTCTGA+CGG | - | 43200:9957-9976 | MS.gene060120:CDS | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | - | 43200:6641-6660 | MS.gene060120:intron | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | + | 43200:7795-7814 | MS.gene060120:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | - | 43200:7607-7626 | MS.gene060120:intron | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | - | 43200:8494-8513 | MS.gene060120:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | - | 43200:8503-8522 | MS.gene060120:CDS | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | - | 43200:9583-9602 | MS.gene060120:CDS | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | + | 43200:7700-7719 | MS.gene060120:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | - | 43200:9491-9510 | MS.gene060120:CDS | 40.0% | |
| TTTGCCGCAGTATTCATATC+AGG | + | 43200:6648-6667 | MS.gene060120:intergenic | 40.0% | |
| !! | AGGAGTGTCTTTCGTTTGAT+CGG | - | 43200:7195-7214 | MS.gene060120:intron | 40.0% |
| !! | CAATCTCTCGCGTTTTATTG+AGG | - | 43200:9917-9936 | MS.gene060120:intron | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | + | 43200:8614-8633 | MS.gene060120:intergenic | 40.0% |
| AACCAATTCAAGGACGAGCA+AGG | - | 43200:7536-7555 | MS.gene060120:intron | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | + | 43200:9487-9506 | MS.gene060120:intergenic | 45.0% | |
| AGATTTCCACCCTAGCGTTT+GGG | - | 43200:6314-6333 | MS.gene060120:CDS | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | - | 43200:8096-8115 | MS.gene060120:CDS | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | - | 43200:9472-9491 | MS.gene060120:CDS | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | - | 43200:9576-9595 | MS.gene060120:CDS | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | - | 43200:7754-7773 | MS.gene060120:CDS | 45.0% | |
| CATGGACTTTACGTTTCACC+TGG | - | 43200:6900-6919 | MS.gene060120:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | - | 43200:9582-9601 | MS.gene060120:CDS | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | - | 43200:9396-9415 | MS.gene060120:CDS | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | - | 43200:7614-7633 | MS.gene060120:intron | 45.0% | |
| GCTCCAAAGCCTACATCAAA+AGG | - | 43200:7859-7878 | MS.gene060120:intron | 45.0% | |
| GGATGAAATTGTGTCAAGCG+AGG | - | 43200:9604-9623 | MS.gene060120:CDS | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | + | 43200:9488-9507 | MS.gene060120:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | + | 43200:7699-7718 | MS.gene060120:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | + | 43200:9440-9459 | MS.gene060120:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | + | 43200:9394-9413 | MS.gene060120:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | + | 43200:7541-7560 | MS.gene060120:intergenic | 45.0% | |
| ! | TAACTTCTTGCCACTAGCCT+AGG | + | 43200:7767-7786 | MS.gene060120:intergenic | 45.0% |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | - | 43200:7998-8017 | MS.gene060120:intron | 45.0% |
| !! | CTGTGCTATTTAGGGTGTTG+AGG | - | 43200:6874-6893 | MS.gene060120:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | - | 43200:6882-6901 | MS.gene060120:CDS | 45.0% |
| !!! | AATTTTTTTTTACATAAAAT+AGG | - | 43200:7175-7194 | MS.gene060120:intron | 5.0% |
| AAGAGAAGGACTCAATCGGG+TGG | + | 43200:7696-7715 | MS.gene060120:intergenic | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | - | 43200:6313-6332 | MS.gene060120:CDS | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | - | 43200:7747-7766 | MS.gene060120:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | - | 43200:6315-6334 | MS.gene060120:CDS | 50.0% | |
| TTCTGGTCACCTTGAGTCCA+TGG | - | 43200:7670-7689 | MS.gene060120:CDS | 50.0% | |
| !!! | GAGGCGTTGGCTTTTACTTC+TGG | - | 43200:7653-7672 | MS.gene060120:intron | 50.0% |
| AATCTCCCCAAACGCTAGGG+TGG | + | 43200:6323-6342 | MS.gene060120:intergenic | 55.0% | |
| AGGACTCAATCGGGTGGCCA+TGG | + | 43200:7690-7709 | MS.gene060120:intergenic | 60.0% | |
| ATCGGGTGGCCATGGACTCA+AGG | + | 43200:7682-7701 | MS.gene060120:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 43200 | gene | 6268 | 10031 | 6268 | ID=MS.gene060120 |
| 43200 | mRNA | 6268 | 10031 | 6268 | ID=MS.gene060120.t1;Parent=MS.gene060120 |
| 43200 | exon | 9928 | 10031 | 9928 | ID=MS.gene060120.t1.exon1;Parent=MS.gene060120.t1 |
| 43200 | CDS | 9928 | 10031 | 9928 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 9378 | 9657 | 9378 | ID=MS.gene060120.t1.exon2;Parent=MS.gene060120.t1 |
| 43200 | CDS | 9378 | 9657 | 9378 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 8399 | 8771 | 8399 | ID=MS.gene060120.t1.exon3;Parent=MS.gene060120.t1 |
| 43200 | CDS | 8399 | 8771 | 8399 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 8077 | 8295 | 8077 | ID=MS.gene060120.t1.exon4;Parent=MS.gene060120.t1 |
| 43200 | CDS | 8077 | 8295 | 8077 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 7667 | 7805 | 7667 | ID=MS.gene060120.t1.exon5;Parent=MS.gene060120.t1 |
| 43200 | CDS | 7667 | 7805 | 7667 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 6674 | 6922 | 6674 | ID=MS.gene060120.t1.exon6;Parent=MS.gene060120.t1 |
| 43200 | CDS | 6674 | 6922 | 6674 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| 43200 | exon | 6268 | 6561 | 6268 | ID=MS.gene060120.t1.exon7;Parent=MS.gene060120.t1 |
| 43200 | CDS | 6268 | 6561 | 6268 | ID=cds.MS.gene060120.t1;Parent=MS.gene060120.t1 |
| Gene Sequence |
| Protein sequence |
