Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54842.t1 | KEH39281.1 | 90.5 | 264 | 25 | 0 | 145 | 408 | 398 | 661 | 1.40E-126 | 463 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54842.t1 | Q67ZB3 | 27.2 | 151 | 110 | 0 | 253 | 403 | 302 | 452 | 1.5e-10 | 68.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54842.t1 | A0A072VCF9 | 90.5 | 264 | 25 | 0 | 145 | 408 | 398 | 661 | 1.0e-126 | 463.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050611 | MS.gene54842 | 0.818328 | 2.08E-52 | -1.69E-46 |
MS.gene051957 | MS.gene54842 | 0.824819 | 6.56E-54 | -1.69E-46 |
MS.gene052829 | MS.gene54842 | 0.831384 | 1.72E-55 | -1.69E-46 |
MS.gene052843 | MS.gene54842 | 0.826092 | 3.28E-54 | -1.69E-46 |
MS.gene053974 | MS.gene54842 | 0.804186 | 2.44E-49 | -1.69E-46 |
MS.gene054291 | MS.gene54842 | -0.810678 | 1.02E-50 | -1.69E-46 |
MS.gene05531 | MS.gene54842 | 0.816212 | 6.21E-52 | -1.69E-46 |
MS.gene055589 | MS.gene54842 | 0.807009 | 6.23E-50 | -1.69E-46 |
MS.gene055818 | MS.gene54842 | 0.808373 | 3.20E-50 | -1.69E-46 |
MS.gene058625 | MS.gene54842 | 0.821732 | 3.45E-53 | -1.69E-46 |
MS.gene058829 | MS.gene54842 | 0.805159 | 1.53E-49 | -1.69E-46 |
MS.gene059584 | MS.gene54842 | 0.820073 | 8.32E-53 | -1.69E-46 |
MS.gene059625 | MS.gene54842 | 0.800955 | 1.13E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54842.t1 | MTR_2g091245 | 81.321 | 439 | 47 | 3 | 1 | 408 | 227 | 661 | 0.0 | 664 |
MS.gene54842.t1 | MTR_2g091240 | 58.475 | 472 | 129 | 8 | 1 | 407 | 121 | 590 | 1.67e-155 | 452 |
MS.gene54842.t1 | MTR_5g078510 | 55.069 | 434 | 153 | 5 | 12 | 407 | 116 | 545 | 2.73e-143 | 419 |
MS.gene54842.t1 | MTR_5g078510 | 45.865 | 133 | 68 | 1 | 9 | 141 | 43 | 171 | 6.34e-13 | 70.9 |
MS.gene54842.t1 | MTR_5g078510 | 43.434 | 99 | 52 | 1 | 40 | 138 | 4 | 98 | 2.59e-12 | 68.9 |
MS.gene54842.t1 | MTR_5g078510 | 41.176 | 119 | 66 | 1 | 23 | 141 | 1 | 115 | 2.96e-11 | 65.5 |
MS.gene54842.t1 | MTR_2g091260 | 58.661 | 433 | 130 | 6 | 21 | 408 | 449 | 877 | 7.79e-141 | 423 |
MS.gene54842.t1 | MTR_2g091260 | 44.079 | 152 | 70 | 3 | 1 | 141 | 236 | 383 | 4.27e-16 | 80.9 |
MS.gene54842.t1 | MTR_2g091260 | 43.165 | 139 | 75 | 1 | 8 | 146 | 366 | 500 | 1.84e-12 | 69.7 |
MS.gene54842.t1 | MTR_6g045183 | 53.813 | 459 | 150 | 6 | 12 | 408 | 310 | 768 | 4.48e-140 | 418 |
MS.gene54842.t1 | MTR_2g091250 | 59.716 | 422 | 136 | 5 | 21 | 408 | 874 | 1295 | 8.49e-134 | 415 |
MS.gene54842.t1 | MTR_2g091250 | 44.720 | 161 | 76 | 2 | 2 | 149 | 204 | 364 | 1.06e-21 | 98.2 |
MS.gene54842.t1 | MTR_2g091250 | 38.983 | 177 | 84 | 3 | 21 | 182 | 517 | 684 | 1.20e-18 | 89.0 |
MS.gene54842.t1 | MTR_2g091250 | 41.791 | 134 | 74 | 1 | 8 | 141 | 532 | 661 | 3.99e-17 | 84.3 |
MS.gene54842.t1 | MTR_2g091250 | 42.759 | 145 | 59 | 3 | 21 | 141 | 587 | 731 | 1.04e-16 | 83.2 |
MS.gene54842.t1 | MTR_2g091250 | 40.278 | 144 | 68 | 2 | 12 | 141 | 704 | 843 | 7.93e-15 | 77.0 |
MS.gene54842.t1 | MTR_2g091250 | 41.727 | 139 | 71 | 2 | 13 | 141 | 649 | 787 | 1.26e-14 | 76.6 |
MS.gene54842.t1 | MTR_2g091250 | 34.615 | 182 | 83 | 3 | 3 | 152 | 271 | 448 | 1.38e-14 | 76.3 |
MS.gene54842.t1 | MTR_2g091250 | 38.608 | 158 | 65 | 2 | 12 | 141 | 410 | 563 | 1.60e-14 | 76.3 |
MS.gene54842.t1 | MTR_2g091250 | 40.288 | 139 | 66 | 2 | 20 | 141 | 768 | 906 | 3.56e-13 | 72.0 |
MS.gene54842.t1 | MTR_2g091250 | 40.426 | 141 | 79 | 2 | 1 | 141 | 610 | 745 | 1.24e-12 | 70.5 |
MS.gene54842.t1 | MTR_2g091250 | 33.152 | 184 | 60 | 3 | 21 | 141 | 338 | 521 | 2.92e-11 | 65.9 |
MS.gene54842.t1 | MTR_2g091105 | 55.257 | 447 | 149 | 7 | 12 | 407 | 241 | 687 | 1.34e-131 | 394 |
MS.gene54842.t1 | MTR_2g091090 | 51.724 | 464 | 167 | 8 | 1 | 407 | 190 | 653 | 2.65e-125 | 377 |
MS.gene54842.t1 | MTR_2g091110 | 52.220 | 473 | 140 | 8 | 16 | 407 | 834 | 1301 | 4.45e-120 | 378 |
MS.gene54842.t1 | MTR_2g091110 | 47.692 | 130 | 64 | 1 | 12 | 141 | 761 | 886 | 1.08e-19 | 92.0 |
MS.gene54842.t1 | MTR_2g091110 | 46.875 | 128 | 64 | 1 | 14 | 141 | 553 | 676 | 3.14e-19 | 90.9 |
MS.gene54842.t1 | MTR_2g091110 | 38.144 | 194 | 95 | 4 | 1 | 169 | 232 | 425 | 4.25e-18 | 87.4 |
MS.gene54842.t1 | MTR_2g091110 | 38.889 | 162 | 86 | 2 | 9 | 170 | 660 | 808 | 4.95e-18 | 87.0 |
MS.gene54842.t1 | MTR_2g091110 | 43.571 | 140 | 69 | 2 | 12 | 141 | 607 | 746 | 6.37e-18 | 86.7 |
MS.gene54842.t1 | MTR_2g091110 | 42.143 | 140 | 76 | 2 | 2 | 141 | 710 | 844 | 3.86e-17 | 84.3 |
MS.gene54842.t1 | MTR_2g091110 | 38.462 | 169 | 85 | 2 | 12 | 170 | 579 | 738 | 5.78e-17 | 84.0 |
MS.gene54842.t1 | MTR_2g091110 | 40.741 | 162 | 70 | 4 | 1 | 141 | 478 | 634 | 2.59e-16 | 81.6 |
MS.gene54842.t1 | MTR_2g091110 | 40.310 | 129 | 73 | 1 | 21 | 149 | 714 | 838 | 4.47e-16 | 80.9 |
MS.gene54842.t1 | MTR_2g091110 | 44.604 | 139 | 70 | 2 | 3 | 141 | 370 | 501 | 2.85e-15 | 78.6 |
MS.gene54842.t1 | MTR_2g091110 | 36.879 | 141 | 72 | 2 | 26 | 149 | 460 | 600 | 1.11e-11 | 67.4 |
MS.gene54842.t1 | MTR_2g010420 | 49.510 | 408 | 189 | 5 | 12 | 407 | 437 | 839 | 7.73e-113 | 350 |
MS.gene54842.t1 | MTR_2g010420 | 37.805 | 164 | 85 | 3 | 3 | 149 | 330 | 493 | 1.15e-14 | 76.6 |
MS.gene54842.t1 | MTR_2g010420 | 38.323 | 167 | 64 | 4 | 14 | 141 | 242 | 408 | 1.19e-13 | 73.2 |
MS.gene54842.t1 | MTR_2g091370 | 46.207 | 435 | 193 | 5 | 9 | 406 | 407 | 837 | 1.31e-106 | 333 |
MS.gene54842.t1 | MTR_2g091370 | 38.636 | 176 | 73 | 3 | 1 | 141 | 276 | 451 | 3.00e-17 | 84.3 |
MS.gene54842.t1 | MTR_2g091290 | 45.964 | 446 | 180 | 5 | 8 | 392 | 376 | 821 | 2.82e-106 | 332 |
MS.gene54842.t1 | MTR_2g091290 | 37.500 | 176 | 75 | 3 | 1 | 141 | 246 | 421 | 1.10e-15 | 79.7 |
MS.gene54842.t1 | MTR_2g091290 | 45.455 | 110 | 56 | 1 | 32 | 141 | 344 | 449 | 1.87e-15 | 79.0 |
MS.gene54842.t1 | MTR_2g091015 | 51.813 | 386 | 106 | 8 | 9 | 323 | 510 | 886 | 5.20e-100 | 317 |
MS.gene54842.t1 | MTR_2g091015 | 45.946 | 111 | 42 | 2 | 21 | 131 | 494 | 586 | 2.71e-14 | 75.5 |
MS.gene54842.t1 | MTR_2g091015 | 40.580 | 138 | 65 | 1 | 21 | 141 | 315 | 452 | 2.88e-14 | 75.1 |
MS.gene54842.t1 | MTR_2g091015 | 36.994 | 173 | 74 | 3 | 12 | 149 | 376 | 548 | 4.19e-13 | 71.6 |
MS.gene54842.t1 | MTR_2g091015 | 40.132 | 152 | 80 | 3 | 5 | 149 | 345 | 492 | 1.21e-12 | 70.1 |
MS.gene54842.t1 | MTR_2g091015 | 37.500 | 160 | 68 | 3 | 12 | 143 | 236 | 391 | 6.64e-12 | 67.8 |
MS.gene54842.t1 | MTR_2g091025 | 46.366 | 399 | 179 | 6 | 2 | 366 | 179 | 576 | 2.01e-98 | 305 |
MS.gene54842.t1 | MTR_3g110385 | 44.820 | 473 | 164 | 9 | 12 | 408 | 362 | 813 | 1.12e-94 | 301 |
MS.gene54842.t1 | MTR_3g110385 | 45.714 | 140 | 72 | 1 | 12 | 151 | 320 | 455 | 6.69e-20 | 92.4 |
MS.gene54842.t1 | MTR_3g110385 | 42.336 | 137 | 62 | 1 | 22 | 141 | 211 | 347 | 3.15e-17 | 84.3 |
MS.gene54842.t1 | MTR_3g110385 | 35.882 | 170 | 84 | 2 | 1 | 149 | 218 | 383 | 2.50e-15 | 78.6 |
MS.gene54842.t1 | MTR_2g091285 | 52.108 | 332 | 111 | 5 | 21 | 305 | 259 | 589 | 9.09e-85 | 270 |
MS.gene54842.t1 | MTR_5g038810 | 50.314 | 318 | 125 | 6 | 4 | 321 | 214 | 498 | 1.86e-81 | 263 |
MS.gene54842.t1 | MTR_2g091030 | 48.267 | 375 | 121 | 6 | 1 | 305 | 217 | 588 | 2.07e-81 | 261 |
MS.gene54842.t1 | MTR_2g091335 | 52.786 | 341 | 106 | 6 | 12 | 305 | 272 | 604 | 7.27e-81 | 260 |
MS.gene54842.t1 | MTR_2g093010 | 43.424 | 403 | 148 | 6 | 11 | 336 | 450 | 849 | 8.19e-80 | 263 |
MS.gene54842.t1 | MTR_2g093010 | 51.724 | 116 | 46 | 1 | 1 | 106 | 262 | 377 | 3.51e-21 | 96.7 |
MS.gene54842.t1 | MTR_2g093010 | 39.610 | 154 | 69 | 2 | 12 | 141 | 423 | 576 | 5.01e-15 | 77.8 |
MS.gene54842.t1 | MTR_2g093010 | 43.424 | 403 | 148 | 6 | 11 | 336 | 451 | 850 | 8.94e-80 | 263 |
MS.gene54842.t1 | MTR_2g093010 | 51.724 | 116 | 46 | 1 | 1 | 106 | 263 | 378 | 3.65e-21 | 96.3 |
MS.gene54842.t1 | MTR_2g093010 | 39.610 | 154 | 69 | 2 | 12 | 141 | 424 | 577 | 5.25e-15 | 77.4 |
MS.gene54842.t1 | MTR_2g091080 | 53.698 | 311 | 129 | 4 | 4 | 308 | 460 | 761 | 7.74e-74 | 245 |
MS.gene54842.t1 | MTR_2g091080 | 40.351 | 171 | 82 | 2 | 1 | 151 | 222 | 392 | 4.17e-20 | 93.2 |
MS.gene54842.t1 | MTR_2g091080 | 41.481 | 135 | 75 | 1 | 7 | 141 | 280 | 410 | 1.41e-16 | 82.4 |
MS.gene54842.t1 | MTR_2g091080 | 43.885 | 139 | 74 | 1 | 3 | 141 | 304 | 438 | 1.54e-16 | 82.0 |
MS.gene54842.t1 | MTR_2g091080 | 44.615 | 130 | 68 | 1 | 12 | 141 | 397 | 522 | 5.92e-15 | 77.4 |
MS.gene54842.t1 | MTR_2g104190 | 46.438 | 379 | 117 | 7 | 1 | 350 | 300 | 621 | 8.63e-74 | 242 |
MS.gene54842.t1 | MTR_2g010420 | 46.732 | 306 | 146 | 5 | 12 | 305 | 437 | 737 | 1.31e-70 | 236 |
MS.gene54842.t1 | MTR_2g010420 | 37.805 | 164 | 85 | 3 | 3 | 149 | 330 | 493 | 2.17e-14 | 75.5 |
MS.gene54842.t1 | MTR_2g010420 | 38.323 | 167 | 64 | 4 | 14 | 141 | 242 | 408 | 2.43e-13 | 72.4 |
MS.gene54842.t1 | MTR_2g090980 | 46.479 | 284 | 134 | 4 | 60 | 342 | 288 | 554 | 4.47e-66 | 220 |
MS.gene54842.t1 | MTR_2g103620 | 48.208 | 307 | 129 | 6 | 5 | 305 | 96 | 378 | 2.48e-63 | 208 |
MS.gene54842.t1 | MTR_2g091070 | 60.000 | 185 | 74 | 0 | 182 | 366 | 25 | 209 | 2.93e-63 | 202 |
MS.gene54842.t1 | MTR_2g103640 | 47.651 | 298 | 116 | 7 | 5 | 278 | 72 | 353 | 4.86e-53 | 181 |
MS.gene54842.t1 | MTR_8g467200 | 34.762 | 420 | 198 | 12 | 1 | 403 | 43 | 403 | 9.06e-47 | 167 |
MS.gene54842.t1 | MTR_4g046660 | 46.304 | 257 | 120 | 8 | 157 | 403 | 428 | 676 | 1.51e-40 | 153 |
MS.gene54842.t1 | MTR_8g107320 | 42.180 | 211 | 90 | 5 | 102 | 305 | 24 | 209 | 2.41e-36 | 132 |
MS.gene54842.t1 | MTR_2g091040 | 43.860 | 228 | 84 | 5 | 1 | 184 | 190 | 417 | 8.10e-32 | 127 |
MS.gene54842.t1 | MTR_2g091040 | 61.538 | 104 | 39 | 1 | 305 | 407 | 422 | 525 | 1.82e-31 | 125 |
MS.gene54842.t1 | MTR_7g056317 | 70.408 | 98 | 28 | 1 | 222 | 319 | 1 | 97 | 7.03e-27 | 103 |
MS.gene54842.t1 | MTR_2g091010 | 56.436 | 101 | 44 | 0 | 306 | 406 | 636 | 736 | 4.23e-26 | 111 |
MS.gene54842.t1 | MTR_2g091010 | 43.421 | 152 | 71 | 2 | 1 | 141 | 280 | 427 | 3.77e-17 | 84.0 |
MS.gene54842.t1 | MTR_2g091010 | 33.953 | 215 | 105 | 3 | 5 | 182 | 421 | 635 | 4.95e-15 | 77.4 |
MS.gene54842.t1 | MTR_2g091010 | 41.606 | 137 | 70 | 1 | 21 | 147 | 381 | 517 | 5.52e-14 | 74.3 |
MS.gene54842.t1 | MTR_2g091280 | 46.108 | 167 | 52 | 3 | 21 | 149 | 544 | 710 | 2.57e-25 | 108 |
MS.gene54842.t1 | MTR_2g091280 | 47.727 | 132 | 59 | 2 | 20 | 141 | 303 | 434 | 1.08e-18 | 89.0 |
MS.gene54842.t1 | MTR_2g091280 | 44.304 | 158 | 61 | 4 | 12 | 143 | 323 | 479 | 1.82e-17 | 85.1 |
MS.gene54842.t1 | MTR_2g091280 | 40.411 | 146 | 75 | 2 | 12 | 145 | 379 | 524 | 2.23e-14 | 75.5 |
MS.gene54842.t1 | MTR_2g091280 | 41.549 | 142 | 71 | 2 | 2 | 143 | 237 | 366 | 8.02e-12 | 67.4 |
MS.gene54842.t1 | MTR_2g091280 | 36.416 | 173 | 62 | 3 | 13 | 141 | 436 | 604 | 5.91e-11 | 64.7 |
MS.gene54842.t1 | MTR_4g084920 | 41.270 | 189 | 93 | 5 | 71 | 243 | 108 | 294 | 2.07e-24 | 102 |
MS.gene54842.t1 | MTR_4g084930 | 52.577 | 97 | 45 | 1 | 307 | 403 | 37 | 132 | 7.04e-24 | 97.1 |
MS.gene54842.t1 | MTR_2g091325 | 44.828 | 145 | 55 | 3 | 12 | 149 | 420 | 546 | 5.05e-22 | 98.6 |
MS.gene54842.t1 | MTR_2g091325 | 37.356 | 174 | 97 | 2 | 7 | 170 | 303 | 474 | 1.01e-16 | 82.4 |
MS.gene54842.t1 | MTR_2g091325 | 45.455 | 121 | 62 | 1 | 21 | 141 | 289 | 405 | 2.30e-16 | 81.3 |
MS.gene54842.t1 | MTR_8g106540 | 29.617 | 287 | 167 | 7 | 28 | 305 | 24 | 284 | 1.86e-21 | 94.0 |
MS.gene54842.t1 | MTR_2g091330 | 40.000 | 160 | 79 | 2 | 12 | 154 | 435 | 594 | 2.49e-18 | 87.4 |
MS.gene54842.t1 | MTR_2g091330 | 41.497 | 147 | 71 | 3 | 1 | 136 | 231 | 373 | 5.46e-13 | 70.9 |
MS.gene54842.t1 | MTR_2g091330 | 46.281 | 121 | 61 | 1 | 21 | 141 | 318 | 434 | 1.66e-12 | 69.7 |
MS.gene54842.t1 | MTR_2g091315 | 45.912 | 159 | 66 | 3 | 1 | 139 | 255 | 413 | 7.01e-18 | 85.9 |
MS.gene54842.t1 | MTR_2g091315 | 41.935 | 124 | 63 | 2 | 10 | 128 | 442 | 561 | 4.47e-15 | 77.4 |
MS.gene54842.t1 | MTR_4g095080 | 28.736 | 261 | 155 | 9 | 169 | 406 | 189 | 441 | 1.08e-15 | 79.3 |
MS.gene54842.t1 | MTR_2g091360 | 52.326 | 86 | 41 | 0 | 12 | 97 | 71 | 156 | 4.42e-15 | 76.3 |
MS.gene54842.t1 | MTR_2g091360 | 29.384 | 211 | 129 | 6 | 4 | 197 | 18 | 225 | 7.80e-13 | 69.3 |
MS.gene54842.t1 | MTR_5g078500 | 44.954 | 109 | 50 | 1 | 1 | 99 | 190 | 298 | 8.64e-15 | 75.1 |
MS.gene54842.t1 | MTR_3g056070 | 29.319 | 191 | 130 | 2 | 215 | 404 | 172 | 358 | 8.81e-14 | 73.2 |
MS.gene54842.t1 | MTR_2g090640 | 37.427 | 171 | 80 | 3 | 1 | 144 | 119 | 289 | 9.58e-14 | 73.2 |
MS.gene54842.t1 | MTR_2g090640 | 28.400 | 250 | 126 | 6 | 21 | 233 | 282 | 515 | 5.14e-13 | 70.9 |
MS.gene54842.t1 | MTR_2g090640 | 39.706 | 136 | 78 | 1 | 3 | 138 | 194 | 325 | 1.78e-12 | 69.3 |
MS.gene54842.t1 | MTR_7g056313 | 42.975 | 121 | 65 | 1 | 21 | 141 | 215 | 331 | 2.26e-13 | 71.2 |
MS.gene54842.t1 | MTR_7g056313 | 35.673 | 171 | 72 | 3 | 1 | 137 | 203 | 369 | 2.22e-11 | 65.5 |
MS.gene54842.t1 | MTR_5g094400 | 27.128 | 188 | 132 | 2 | 216 | 402 | 198 | 381 | 7.94e-12 | 67.4 |
MS.gene54842.t1 | MTR_2g091005 | 37.662 | 154 | 77 | 3 | 1 | 139 | 248 | 397 | 8.59e-12 | 67.4 |
MS.gene54842.t1 | MTR_2g091005 | 41.176 | 102 | 39 | 1 | 307 | 408 | 530 | 610 | 1.12e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54842.t1 | AT1G31814 | 26.984 | 189 | 131 | 4 | 207 | 391 | 153 | 338 | 4.86e-14 | 73.9 |
MS.gene54842.t1 | AT5G48385 | 27.097 | 155 | 113 | 0 | 253 | 407 | 302 | 456 | 4.52e-13 | 71.2 |
MS.gene54842.t1 | AT5G16320 | 25.664 | 226 | 158 | 5 | 186 | 407 | 142 | 361 | 9.62e-12 | 67.0 |
Find 65 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAAATCAGTTTGGCATTT+TGG | 0.038762 | 2.1:-9636758 | None:intergenic |
AACTGTTCAACAATGCATTT+TGG | 0.163705 | 2.1:+9636947 | MS.gene54842:CDS |
CTTCTTACACAGTGGATTAA+TGG | 0.178750 | 2.1:-9635386 | None:intergenic |
TTTCGATGAAGATGAAATTT+TGG | 0.207548 | 2.1:+9635615 | MS.gene54842:CDS |
GATACAATGAACAAATTAAT+TGG | 0.217654 | 2.1:+9634073 | None:intergenic |
TGATTCAAAGCTGAATAAAT+TGG | 0.240384 | 2.1:+9634462 | MS.gene54842:CDS |
GAAGATTCTTTGGCAGTTCT+TGG | 0.256037 | 2.1:+9635553 | MS.gene54842:CDS |
AGAGAATAGTGAAGATTCTT+TGG | 0.258575 | 2.1:+9635543 | MS.gene54842:CDS |
AGATCAAGAAATTGCTAGTT+TGG | 0.267521 | 2.1:+9636923 | MS.gene54842:CDS |
CTTACACAATCTTCAATATT+CGG | 0.299585 | 2.1:-9635475 | None:intergenic |
ATATGCAGTTGCATCTTTCA+TGG | 0.315210 | 2.1:+9635228 | MS.gene54842:intron |
TTCTTACACAGTGGATTAAT+GGG | 0.334842 | 2.1:-9635385 | None:intergenic |
GAACTTGGAAGGACGAATAA+AGG | 0.361370 | 2.1:+9634213 | MS.gene54842:CDS |
CGATTAAGTCATACCATTGA+TGG | 0.364830 | 2.1:+9635256 | MS.gene54842:CDS |
AATTTATTCAGCTTTGAATC+AGG | 0.368146 | 2.1:-9634460 | None:intergenic |
TATGGAGATGTTTCAGACTC+TGG | 0.412809 | 2.1:+9635672 | MS.gene54842:CDS |
GAGGTTCTTACAAAGGAGAT+TGG | 0.415846 | 2.1:+9636987 | MS.gene54842:CDS |
CAGCTTTGAATCAGGATCCT+TGG | 0.431352 | 2.1:-9634452 | None:intergenic |
ACTAGCAATTTCTTGATCTC+TGG | 0.437247 | 2.1:-9636919 | None:intergenic |
GAAGAAGCAATTTGAGGGTC+AGG | 0.438039 | 2.1:+9634165 | MS.gene54842:CDS |
AACCAACTCCGTTGAAATCA+AGG | 0.446102 | 2.1:+9636797 | MS.gene54842:CDS |
ACTGTTCACACAAATCAGTT+TGG | 0.453371 | 2.1:-9636766 | None:intergenic |
TCGTGCTCAAATGAAGGAAT+TGG | 0.453915 | 2.1:+9634135 | MS.gene54842:CDS |
CTTGAGCTACAAGCACATAA+AGG | 0.454488 | 2.1:+9637020 | MS.gene54842:CDS |
AACCTTGATTTCAACGGAGT+TGG | 0.457408 | 2.1:-9636799 | None:intergenic |
GAAGGAGTTTCAATTAAAAG+AGG | 0.459023 | 2.1:+9634273 | MS.gene54842:CDS |
CTGCAAACTTGTTCCATCAA+TGG | 0.465792 | 2.1:-9635269 | None:intergenic |
ATGGAGATGTTTCAGACTCT+GGG | 0.479493 | 2.1:+9635673 | MS.gene54842:CDS |
GATTGTTTACCTGTCAACTT+AGG | 0.480874 | 2.1:-9634502 | None:intergenic |
GTCAATGAAGAAGCAATTTG+AGG | 0.490112 | 2.1:+9634159 | MS.gene54842:CDS |
ATTCAGTTGTACATATAACT+TGG | 0.492664 | 2.1:+9636695 | MS.gene54842:CDS |
TAAATTGGATGGACAAATGA+AGG | 0.494056 | 2.1:+9634477 | MS.gene54842:CDS |
CATTAATCCACTGTGTAAGA+AGG | 0.495309 | 2.1:+9635387 | MS.gene54842:CDS |
TTAAAAGAGGAGGAATTTGA+AGG | 0.496577 | 2.1:+9634286 | MS.gene54842:CDS |
TGATGGAACAAGTTTGCAGT+TGG | 0.496915 | 2.1:+9635273 | MS.gene54842:CDS |
GCAATTCGAGGGACAAATGA+AGG | 0.498239 | 2.1:+9634255 | MS.gene54842:CDS |
TGAAGAACGTCCGAAGGAAA+AGG | 0.507190 | 2.1:+9634387 | MS.gene54842:CDS |
TGAGTCAGAGAAGAAGAACT+TGG | 0.512987 | 2.1:+9634198 | MS.gene54842:CDS |
ATGAAGGAGCCTAAGTTGAC+AGG | 0.531788 | 2.1:+9634493 | MS.gene54842:CDS |
GGAGTTTCAATTAAAAGAGG+AGG | 0.531791 | 2.1:+9634276 | MS.gene54842:CDS |
GAATGGTCGTGCTCAAATGA+AGG | 0.536817 | 2.1:+9634129 | MS.gene54842:CDS |
TCAAAGCTGAATAAATTGGA+TGG | 0.541007 | 2.1:+9634466 | MS.gene54842:CDS |
GCAGTTTGAAAGACAAGCCA+AGG | 0.542581 | 2.1:+9634435 | MS.gene54842:CDS |
GGAGCTCGAATCAAAGAAGA+AGG | 0.548520 | 2.1:+9634360 | MS.gene54842:CDS |
TTAGAGTCTGAAAAGGAGAA+TGG | 0.552697 | 2.1:+9634112 | MS.gene54842:CDS |
TCAATGAAGAAGCAATTTGA+GGG | 0.554776 | 2.1:+9634160 | MS.gene54842:CDS |
GGAAATGAAATCAAAGGTGG+AGG | 0.559109 | 2.1:+9634318 | MS.gene54842:CDS |
AGGAAAAGGTGAATGAGCTC+AGG | 0.560081 | 2.1:+9634401 | MS.gene54842:CDS |
ATCAAGAGAGAAGCAATTCG+AGG | 0.565114 | 2.1:+9634243 | MS.gene54842:CDS |
TGCTCAGCACAAGATAGCTA+TGG | 0.565711 | 2.1:+9635654 | MS.gene54842:CDS |
GGATTGCAAACTACAGTCTG+AGG | 0.567148 | 2.1:+9636968 | MS.gene54842:CDS |
GGAACTCGAAGATCAAGTTA+AGG | 0.570629 | 2.1:+9634339 | MS.gene54842:CDS |
GGAATTTGAAGGCAGACTGA+AGG | 0.574570 | 2.1:+9634297 | MS.gene54842:CDS |
CAGAAGAACCTTGATTTCAA+CGG | 0.584171 | 2.1:-9636805 | None:intergenic |
TCAGAGAAGAAGAACTTGGA+AGG | 0.587930 | 2.1:+9634202 | MS.gene54842:CDS |
ATTAATCCACTGTGTAAGAA+GGG | 0.589689 | 2.1:+9635388 | MS.gene54842:CDS |
ACTGAAGGAAATGAAATCAA+AGG | 0.604087 | 2.1:+9634312 | MS.gene54842:CDS |
TTGTTGAGAATCTTATCAAG+AGG | 0.606243 | 2.1:+9636649 | MS.gene54842:CDS |
TCAAGAGAGAAGCAATTCGA+GGG | 0.611920 | 2.1:+9634244 | MS.gene54842:CDS |
GGAATTTGAAGAACGTCCGA+AGG | 0.617782 | 2.1:+9634381 | MS.gene54842:CDS |
GAAGGAAATGAAATCAAAGG+TGG | 0.617855 | 2.1:+9634315 | MS.gene54842:CDS |
TTGTCTCCCTTCTTACACAG+TGG | 0.649739 | 2.1:-9635394 | None:intergenic |
ACAGTCTGAGGTTCTTACAA+AGG | 0.655255 | 2.1:+9636980 | MS.gene54842:CDS |
ACTGTTGCAGTTGAGTCACA+TGG | 0.677260 | 2.1:+9635310 | MS.gene54842:CDS |
GTTGTTCTAGTAGAAAGATG+CGG | 0.701348 | 2.1:-9635438 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGGCTTAATTATAATATTA+TGG | + | chr2.1:9634836-9634855 | MS.gene54842:intron | 15.0% |
!! | TATCAAAACATAAAGATAAA+AGG | - | chr2.1:9635758-9635777 | None:intergenic | 15.0% |
!! | AAATTGAACTGATATCTAAT+TGG | + | chr2.1:9636388-9636407 | MS.gene54842:intron | 20.0% |
!! | AAGATTATGATATTAGTTGT+TGG | + | chr2.1:9636361-9636380 | MS.gene54842:intron | 20.0% |
!! | ATTAAGAAAATATATTGACG+GGG | + | chr2.1:9634531-9634550 | MS.gene54842:intron | 20.0% |
!! | CATTAAGAAAATATATTGAC+GGG | + | chr2.1:9634530-9634549 | MS.gene54842:intron | 20.0% |
!! | GCATTAAGAAAATATATTGA+CGG | + | chr2.1:9634529-9634548 | MS.gene54842:intron | 20.0% |
!!! | AGATTTTTGTTGTTGTTAAT+TGG | + | chr2.1:9636585-9636604 | MS.gene54842:intron | 20.0% |
!!! | AGTTATCCTATTTTCTTAAA+AGG | - | chr2.1:9636301-9636320 | None:intergenic | 20.0% |
!!! | ATGAATCCTTTTAAGAAAAT+AGG | + | chr2.1:9636292-9636311 | MS.gene54842:intron | 20.0% |
!!! | GATTTCATTGATTAATAAAC+AGG | - | chr2.1:9634991-9635010 | None:intergenic | 20.0% |
!!! | TACTTTTTTGAAAGAAACAT+GGG | - | chr2.1:9636049-9636068 | None:intergenic | 20.0% |
!!! | TGTTTTGATATGAATAAATG+TGG | - | chr2.1:9636113-9636132 | None:intergenic | 20.0% |
!!! | TTACTTTTTTGAAAGAAACA+TGG | - | chr2.1:9636050-9636069 | None:intergenic | 20.0% |
!!! | TTTACCCATTTTATCATTTA+TGG | + | chr2.1:9635921-9635940 | MS.gene54842:intron | 20.0% |
!!! | TTTTTCAAGTATATTGCAAA+TGG | + | chr2.1:9634898-9634917 | MS.gene54842:intron | 20.0% |
! | AGAAAAATTAGAGTCTGAAA+AGG | + | chr2.1:9634105-9634124 | MS.gene54842:CDS | 25.0% |
! | AGAGATTCATAAAATGTTCA+AGG | - | chr2.1:9634778-9634797 | None:intergenic | 25.0% |
! | ATCCACCATAAATGATAAAA+TGG | - | chr2.1:9635929-9635948 | None:intergenic | 25.0% |
! | ATCTCCTAGATTGAAATATA+TGG | - | chr2.1:9635094-9635113 | None:intergenic | 25.0% |
! | ATTACTATGTATTTGAACTC+AGG | + | chr2.1:9636890-9636909 | MS.gene54842:intron | 25.0% |
! | ATTCAGTTGTACATATAACT+TGG | + | chr2.1:9636695-9636714 | MS.gene54842:CDS | 25.0% |
! | CTTACACAATCTTCAATATT+CGG | - | chr2.1:9635478-9635497 | None:intergenic | 25.0% |
! | GAGATTCATAAAATGTTCAA+GGG | - | chr2.1:9634777-9634796 | None:intergenic | 25.0% |
! | TAAGAAAATAGGATAACTCT+TGG | + | chr2.1:9636303-9636322 | MS.gene54842:intron | 25.0% |
! | TCCACCATAAATGATAAAAT+GGG | - | chr2.1:9635928-9635947 | None:intergenic | 25.0% |
! | TCTCCTAGATTGAAATATAT+GGG | - | chr2.1:9635093-9635112 | None:intergenic | 25.0% |
! | TGATTCAAAGCTGAATAAAT+TGG | + | chr2.1:9634462-9634481 | MS.gene54842:CDS | 25.0% |
!! | TTTCGATGAAGATGAAATTT+TGG | + | chr2.1:9635615-9635634 | MS.gene54842:CDS | 25.0% |
!!! | AAATGCCATTTTTCAATTTG+TGG | + | chr2.1:9636234-9636253 | MS.gene54842:intron | 25.0% |
!!! | AATTTATTCAGCTTTGAATC+AGG | - | chr2.1:9634463-9634482 | None:intergenic | 25.0% |
AAAAAAATCCACCCTATAGT+GGG | - | chr2.1:9635904-9635923 | None:intergenic | 30.0% | |
AAGGGATCTGTTAAAGAAAA+TGG | + | chr2.1:9636264-9636283 | MS.gene54842:intron | 30.0% | |
AAGTATATTGCAAATGGTGT+AGG | + | chr2.1:9634904-9634923 | MS.gene54842:intron | 30.0% | |
ACTGAAGGAAATGAAATCAA+AGG | + | chr2.1:9634312-9634331 | MS.gene54842:CDS | 30.0% | |
AGAGAATAGTGAAGATTCTT+TGG | + | chr2.1:9635543-9635562 | MS.gene54842:CDS | 30.0% | |
AGATCAAGAAATTGCTAGTT+TGG | + | chr2.1:9636923-9636942 | MS.gene54842:CDS | 30.0% | |
ATCCTAACTGTAGATAAGAA+TGG | - | chr2.1:9635838-9635857 | None:intergenic | 30.0% | |
ATGTATTTGAACTCAGGATA+AGG | + | chr2.1:9636896-9636915 | MS.gene54842:intron | 30.0% | |
ATGTTAATTCAGAACTGCTT+TGG | + | chr2.1:9635718-9635737 | MS.gene54842:intron | 30.0% | |
ATTAATCCACTGTGTAAGAA+GGG | + | chr2.1:9635388-9635407 | MS.gene54842:CDS | 30.0% | |
ATTCATAACCAGTGTGAAAA+TGG | - | chr2.1:9636865-9636884 | None:intergenic | 30.0% | |
CAACAAAAATCTAAGCAGAT+TGG | - | chr2.1:9636577-9636596 | None:intergenic | 30.0% | |
GAAGGAGTTTCAATTAAAAG+AGG | + | chr2.1:9634273-9634292 | MS.gene54842:CDS | 30.0% | |
TAAAAAAATCCACCCTATAG+TGG | - | chr2.1:9635905-9635924 | None:intergenic | 30.0% | |
TAAATTGGATGGACAAATGA+AGG | + | chr2.1:9634477-9634496 | MS.gene54842:CDS | 30.0% | |
TCAAAGCTGAATAAATTGGA+TGG | + | chr2.1:9634466-9634485 | MS.gene54842:CDS | 30.0% | |
TCAATGAAGAAGCAATTTGA+GGG | + | chr2.1:9634160-9634179 | MS.gene54842:CDS | 30.0% | |
TCAATTTGTGGAGCAAAAAA+GGG | + | chr2.1:9636246-9636265 | MS.gene54842:intron | 30.0% | |
TCACCCATATATTTCAATCT+AGG | + | chr2.1:9635087-9635106 | MS.gene54842:intron | 30.0% | |
TGACGCTTCTATAAATATGA+GGG | + | chr2.1:9635183-9635202 | MS.gene54842:intron | 30.0% | |
TGTCAATTCTCTCTAAACAA+AGG | - | chr2.1:9636442-9636461 | None:intergenic | 30.0% | |
TTAAAAGAGGAGGAATTTGA+AGG | + | chr2.1:9634286-9634305 | MS.gene54842:CDS | 30.0% | |
TTCAATTTGTGGAGCAAAAA+AGG | + | chr2.1:9636245-9636264 | MS.gene54842:intron | 30.0% | |
TTGCTCCACAAATTGAAAAA+TGG | - | chr2.1:9636242-9636261 | None:intergenic | 30.0% | |
TTGTTGAGAATCTTATCAAG+AGG | + | chr2.1:9636649-9636668 | MS.gene54842:CDS | 30.0% | |
TTTAGAGAGAATTGACATCT+TGG | + | chr2.1:9636445-9636464 | MS.gene54842:intron | 30.0% | |
! | AACTGTTCAACAATGCATTT+TGG | + | chr2.1:9636947-9636966 | MS.gene54842:CDS | 30.0% |
! | ACCCATTTTATCATTTATGG+TGG | + | chr2.1:9635924-9635943 | MS.gene54842:intron | 30.0% |
! | ACTGACATGTCTAGAATAAT+AGG | - | chr2.1:9636155-9636174 | None:intergenic | 30.0% |
! | CAGTAAATGATAGTGACAAT+AGG | - | chr2.1:9635165-9635184 | None:intergenic | 30.0% |
! | GGTTTTGCAAATAAAGTTTC+TGG | + | chr2.1:9635694-9635713 | MS.gene54842:CDS | 30.0% |
! | GTCTAGAATAATAGGTGATT+TGG | - | chr2.1:9636147-9636166 | None:intergenic | 30.0% |
!! | GGTTCTTCTGTTTTTCTTAT+TGG | + | chr2.1:9636818-9636837 | MS.gene54842:intron | 30.0% |
!! | TTCTTACACAGTGGATTAAT+GGG | - | chr2.1:9635388-9635407 | None:intergenic | 30.0% |
!!! | AATTTTGGAGCTTTTTGCAT+TGG | + | chr2.1:9635630-9635649 | MS.gene54842:CDS | 30.0% |
!!! | CGTTTTTTTATTCATGGCTA+AGG | + | chr2.1:9634817-9634836 | MS.gene54842:intron | 30.0% |
!!! | CTCTTGCGTTTTTTTATTCA+TGG | + | chr2.1:9634811-9634830 | MS.gene54842:intron | 30.0% |
AAAAGTAGGGAAGGAAAACA+TGG | - | chr2.1:9636082-9636101 | None:intergenic | 35.0% | |
AAAGTAGGGAAGGAAAACAT+GGG | - | chr2.1:9636081-9636100 | None:intergenic | 35.0% | |
AACTGTAGATAAGAATGGCA+TGG | - | chr2.1:9635833-9635852 | None:intergenic | 35.0% | |
AATGGCATGGAAAGTAACAA+TGG | - | chr2.1:9635820-9635839 | None:intergenic | 35.0% | |
ACTAGCAATTTCTTGATCTC+TGG | - | chr2.1:9636922-9636941 | None:intergenic | 35.0% | |
ACTGTTCACACAAATCAGTT+TGG | - | chr2.1:9636769-9636788 | None:intergenic | 35.0% | |
ATATGCAGTTGCATCTTTCA+TGG | + | chr2.1:9635228-9635247 | MS.gene54842:intron | 35.0% | |
ATGAAATCAAACACTGTCTC+TGG | + | chr2.1:9635003-9635022 | MS.gene54842:intron | 35.0% | |
ATGTGGTGATCCATAAAAGT+AGG | - | chr2.1:9636096-9636115 | None:intergenic | 35.0% | |
CAGAAGAACCTTGATTTCAA+CGG | - | chr2.1:9636808-9636827 | None:intergenic | 35.0% | |
CATTAATCCACTGTGTAAGA+AGG | + | chr2.1:9635387-9635406 | MS.gene54842:CDS | 35.0% | |
CGATTAAGTCATACCATTGA+TGG | + | chr2.1:9635256-9635275 | MS.gene54842:CDS | 35.0% | |
CTAGAAACAGTTGCACTAAT+AGG | - | chr2.1:9634967-9634986 | None:intergenic | 35.0% | |
CTGACGCTTCTATAAATATG+AGG | + | chr2.1:9635182-9635201 | MS.gene54842:intron | 35.0% | |
GAAGGAAATGAAATCAAAGG+TGG | + | chr2.1:9634315-9634334 | MS.gene54842:CDS | 35.0% | |
GATTCTCAACAAAATCTGCA+AGG | - | chr2.1:9636641-9636660 | None:intergenic | 35.0% | |
GATTGTTTACCTGTCAACTT+AGG | - | chr2.1:9634505-9634524 | None:intergenic | 35.0% | |
GGAGTTTCAATTAAAAGAGG+AGG | + | chr2.1:9634276-9634295 | MS.gene54842:CDS | 35.0% | |
GTCAATGAAGAAGCAATTTG+AGG | + | chr2.1:9634159-9634178 | MS.gene54842:CDS | 35.0% | |
GTTGTTCTAGTAGAAAGATG+CGG | - | chr2.1:9635441-9635460 | None:intergenic | 35.0% | |
TATCTACAGTTAGGATGAGA+TGG | + | chr2.1:9635842-9635861 | MS.gene54842:intron | 35.0% | |
TGCCATTCTTATCTACAGTT+AGG | + | chr2.1:9635833-9635852 | MS.gene54842:intron | 35.0% | |
TGTGGTGATCCATAAAAGTA+GGG | - | chr2.1:9636095-9636114 | None:intergenic | 35.0% | |
TTAGAGTCTGAAAAGGAGAA+TGG | + | chr2.1:9634112-9634131 | MS.gene54842:CDS | 35.0% | |
TTATGGCCATTCATGATCAA+AGG | + | chr2.1:9635865-9635884 | MS.gene54842:intron | 35.0% | |
! | CAAACATTCCATTTTCACAC+TGG | + | chr2.1:9636854-9636873 | MS.gene54842:intron | 35.0% |
! | CACAAATCAGTTTGGCATTT+TGG | - | chr2.1:9636761-9636780 | None:intergenic | 35.0% |
! | TACATATTTTCTGCCTGTTC+TGG | + | chr2.1:9636608-9636627 | MS.gene54842:intron | 35.0% |
!! | CTTCTTACACAGTGGATTAA+TGG | - | chr2.1:9635389-9635408 | None:intergenic | 35.0% |
!! | GTTTTCCTTCCCTACTTTTA+TGG | + | chr2.1:9636083-9636102 | MS.gene54842:intron | 35.0% |
!! | TGACATCTTGGTGTTAATCT+TGG | + | chr2.1:9636457-9636476 | MS.gene54842:intron | 35.0% |
!! | TTATGGTGGATGTAGTCTTT+AGG | + | chr2.1:9635938-9635957 | MS.gene54842:intron | 35.0% |
AACCAACTCCGTTGAAATCA+AGG | + | chr2.1:9636797-9636816 | MS.gene54842:CDS | 40.0% | |
AACCTCCTGACAAACATTGA+GGG | + | chr2.1:9634930-9634949 | MS.gene54842:intron | 40.0% | |
AACCTTGATTTCAACGGAGT+TGG | - | chr2.1:9636802-9636821 | None:intergenic | 40.0% | |
AATGCCAACTGACATTCTCT+TGG | - | chr2.1:9636193-9636212 | None:intergenic | 40.0% | |
ACAACCAAGAGAATGTCAGT+TGG | + | chr2.1:9636186-9636205 | MS.gene54842:intron | 40.0% | |
ATCAAGAGAGAAGCAATTCG+AGG | + | chr2.1:9634243-9634262 | MS.gene54842:CDS | 40.0% | |
ATGGAGATGTTTCAGACTCT+GGG | + | chr2.1:9635673-9635692 | MS.gene54842:CDS | 40.0% | |
CAGTTAGGATGAGATGGTTA+TGG | + | chr2.1:9635848-9635867 | MS.gene54842:intron | 40.0% | |
CGTGTGTGTGATATGAAAAC+TGG | - | chr2.1:9634724-9634743 | None:intergenic | 40.0% | |
CTTGAGCTACAAGCACATAA+AGG | + | chr2.1:9637020-9637039 | MS.gene54842:CDS | 40.0% | |
GAACTTGGAAGGACGAATAA+AGG | + | chr2.1:9634213-9634232 | MS.gene54842:CDS | 40.0% | |
GAAGATTCTTTGGCAGTTCT+TGG | + | chr2.1:9635553-9635572 | MS.gene54842:CDS | 40.0% | |
GAGGTTCTTACAAAGGAGAT+TGG | + | chr2.1:9636987-9637006 | MS.gene54842:CDS | 40.0% | |
GGAAATGAAATCAAAGGTGG+AGG | + | chr2.1:9634318-9634337 | MS.gene54842:CDS | 40.0% | |
GGAACTCGAAGATCAAGTTA+AGG | + | chr2.1:9634339-9634358 | MS.gene54842:CDS | 40.0% | |
GTGATCCATAAAAGTAGGGA+AGG | - | chr2.1:9636091-9636110 | None:intergenic | 40.0% | |
TAAACAAAGGCGAGAACTGT+GGG | - | chr2.1:9636429-9636448 | None:intergenic | 40.0% | |
TATGGAGATGTTTCAGACTC+TGG | + | chr2.1:9635672-9635691 | MS.gene54842:CDS | 40.0% | |
TCAAGAGAGAAGCAATTCGA+GGG | + | chr2.1:9634244-9634263 | MS.gene54842:CDS | 40.0% | |
TCAGAGAAGAAGAACTTGGA+AGG | + | chr2.1:9634202-9634221 | MS.gene54842:CDS | 40.0% | |
TCGTGCTCAAATGAAGGAAT+TGG | + | chr2.1:9634135-9634154 | MS.gene54842:CDS | 40.0% | |
TGAGTCAGAGAAGAAGAACT+TGG | + | chr2.1:9634198-9634217 | MS.gene54842:CDS | 40.0% | |
TGATGGAACAAGTTTGCAGT+TGG | + | chr2.1:9635273-9635292 | MS.gene54842:CDS | 40.0% | |
TGTCTCTGGTGATTCAGTTA+AGG | + | chr2.1:9635017-9635036 | MS.gene54842:intron | 40.0% | |
! | ACAGTCTGAGGTTCTTACAA+AGG | + | chr2.1:9636980-9636999 | MS.gene54842:CDS | 40.0% |
! | AGCTCATTCACCTTTTCCTT+CGG | - | chr2.1:9634400-9634419 | None:intergenic | 40.0% |
! | CTGCAAACTTGTTCCATCAA+TGG | - | chr2.1:9635272-9635291 | None:intergenic | 40.0% |
AAACAAAGGCGAGAACTGTG+GGG | - | chr2.1:9636428-9636447 | None:intergenic | 45.0% | |
AATGCCCCTCAATGTTTGTC+AGG | - | chr2.1:9634938-9634957 | None:intergenic | 45.0% | |
ACCTCCTGACAAACATTGAG+GGG | + | chr2.1:9634931-9634950 | MS.gene54842:intron | 45.0% | |
ACTGTTGCAGTTGAGTCACA+TGG | + | chr2.1:9635310-9635329 | MS.gene54842:CDS | 45.0% | |
AGGAAAAGGTGAATGAGCTC+AGG | + | chr2.1:9634401-9634420 | MS.gene54842:CDS | 45.0% | |
ATTACTTGCCCACTATAGGG+TGG | + | chr2.1:9635893-9635912 | MS.gene54842:intron | 45.0% | |
CAACCTCCTGACAAACATTG+AGG | + | chr2.1:9634929-9634948 | MS.gene54842:intron | 45.0% | |
CCGATTACTTGCCCACTATA+GGG | + | chr2.1:9635890-9635909 | MS.gene54842:intron | 45.0% | |
CTAAACAAAGGCGAGAACTG+TGG | - | chr2.1:9636430-9636449 | None:intergenic | 45.0% | |
GAAGAAGCAATTTGAGGGTC+AGG | + | chr2.1:9634165-9634184 | MS.gene54842:CDS | 45.0% | |
GAATGGTCGTGCTCAAATGA+AGG | + | chr2.1:9634129-9634148 | MS.gene54842:CDS | 45.0% | |
GCAATTCGAGGGACAAATGA+AGG | + | chr2.1:9634255-9634274 | MS.gene54842:CDS | 45.0% | |
GCAGTTTGAAAGACAAGCCA+AGG | + | chr2.1:9634435-9634454 | MS.gene54842:CDS | 45.0% | |
GGAATTTGAAGAACGTCCGA+AGG | + | chr2.1:9634381-9634400 | MS.gene54842:CDS | 45.0% | |
GGAATTTGAAGGCAGACTGA+AGG | + | chr2.1:9634297-9634316 | MS.gene54842:CDS | 45.0% | |
GGAGCTCGAATCAAAGAAGA+AGG | + | chr2.1:9634360-9634379 | MS.gene54842:CDS | 45.0% | |
GGATTGCAAACTACAGTCTG+AGG | + | chr2.1:9636968-9636987 | MS.gene54842:CDS | 45.0% | |
TCGGCACCTTTGATCATGAA+TGG | - | chr2.1:9635874-9635893 | None:intergenic | 45.0% | |
TGAAGAACGTCCGAAGGAAA+AGG | + | chr2.1:9634387-9634406 | MS.gene54842:CDS | 45.0% | |
TGCTCAGCACAAGATAGCTA+TGG | + | chr2.1:9635654-9635673 | MS.gene54842:CDS | 45.0% | |
TTGTCTCCCTTCTTACACAG+TGG | - | chr2.1:9635397-9635416 | None:intergenic | 45.0% | |
! | ATGAAGGAGCCTAAGTTGAC+AGG | + | chr2.1:9634493-9634512 | MS.gene54842:CDS | 45.0% |
!! | CAGCTTTGAATCAGGATCCT+TGG | - | chr2.1:9634455-9634474 | None:intergenic | 45.0% |
!! | CCCTATAGTGGGCAAGTAAT+CGG | - | chr2.1:9635893-9635912 | None:intergenic | 45.0% |
AACAAAGGCGAGAACTGTGG+GGG | - | chr2.1:9636427-9636446 | None:intergenic | 50.0% | |
ATTGACGGGGAGCAAGAATC+TGG | + | chr2.1:9634544-9634563 | MS.gene54842:intron | 50.0% | |
GCCGATTACTTGCCCACTAT+AGG | + | chr2.1:9635889-9635908 | MS.gene54842:intron | 50.0% | |
GCAAGGTGCAAGACCAGAAC+AGG | - | chr2.1:9636624-9636643 | None:intergenic | 55.0% | |
GCCCCTCAATGTTTGTCAGG+AGG | - | chr2.1:9634935-9634954 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 9634079 | 9637049 | 9634079 | ID=MS.gene54842 |
chr2.1 | mRNA | 9634079 | 9637049 | 9634079 | ID=MS.gene54842.t1;Parent=MS.gene54842 |
chr2.1 | exon | 9634079 | 9634514 | 9634079 | ID=MS.gene54842.t1.exon1;Parent=MS.gene54842.t1 |
chr2.1 | CDS | 9634079 | 9634514 | 9634079 | ID=cds.MS.gene54842.t1;Parent=MS.gene54842.t1 |
chr2.1 | exon | 9635236 | 9635715 | 9635236 | ID=MS.gene54842.t1.exon2;Parent=MS.gene54842.t1 |
chr2.1 | CDS | 9635236 | 9635715 | 9635236 | ID=cds.MS.gene54842.t1;Parent=MS.gene54842.t1 |
chr2.1 | exon | 9636646 | 9636818 | 9636646 | ID=MS.gene54842.t1.exon3;Parent=MS.gene54842.t1 |
chr2.1 | CDS | 9636646 | 9636818 | 9636646 | ID=cds.MS.gene54842.t1;Parent=MS.gene54842.t1 |
chr2.1 | exon | 9636912 | 9637049 | 9636912 | ID=MS.gene54842.t1.exon4;Parent=MS.gene54842.t1 |
chr2.1 | CDS | 9636912 | 9637049 | 9636912 | ID=cds.MS.gene54842.t1;Parent=MS.gene54842.t1 |
Gene Sequence |
Protein sequence |