AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058829


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058829.t1 MTR_0009s0330 33.516 182 62 2 461 642 54 176 8.50e-29 114
MS.gene058829.t1 MTR_0031s0130 37.714 175 86 8 602 767 26 186 1.00e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 179 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCCAACCACCGACTTAA+AGG 0.208074 4.3:-12915413 None:intergenic
AAGATGTGATAACAGATATT+AGG 0.229248 4.3:+12915889 MS.gene058829:CDS
CGATCTCTCAAATTTCTCTT+TGG 0.266239 4.3:-12910114 None:intergenic
TCAACTTCAAATTCATTTGA+TGG 0.278093 4.3:-12910928 None:intergenic
TGATAATCCATCAAATGATT+TGG 0.297456 4.3:+12911298 MS.gene058829:CDS
CATTCTCTGCCTCCACCCTT+TGG 0.298562 4.3:-12915522 None:intergenic
TGATAATATATCAAATGAAT+TGG 0.317818 4.3:+12909824 MS.gene058829:CDS
CAATCATATATGCAGGGTTT+TGG 0.318781 4.3:+12915436 MS.gene058829:CDS
TGATAACCCATCAAATGAAT+TGG 0.321881 4.3:+12910200 MS.gene058829:CDS
AGCCTGATTTGCAGACATTA+TGG 0.326446 4.3:+12915138 MS.gene058829:CDS
CTCTTGCTTCTCTACAAACT+TGG 0.328148 4.3:-12910585 None:intergenic
AGCTAGATATCGCTTGTATT+AGG 0.333158 4.3:+12915920 MS.gene058829:CDS
TAATAATCCATCATTTGAAT+TGG 0.339315 4.3:+12908713 MS.gene058829:CDS
TTTGAATTGGAAGTTGATCT+TGG 0.349340 4.3:+12908726 MS.gene058829:CDS
ATGGCAGATAACACACAAAA+AGG 0.350267 4.3:+12915157 MS.gene058829:CDS
TGCCATAATGTCTGCAAATC+AGG 0.351649 4.3:-12915140 None:intergenic
TTCAGAAGACTTGACGCTTT+AGG 0.351852 4.3:-12908651 None:intergenic
ATTCTCTGCCTCCACCCTTT+GGG 0.352470 4.3:-12915521 None:intergenic
TTCAAAAGACTTGACGCTTT+AGG 0.353871 4.3:-12910491 None:intergenic
GGAGAATCAATCAAATGAAT+TGG 0.357053 4.3:+12911795 MS.gene058829:CDS
TCAACTTCCAATTCATTTGA+TGG 0.360973 4.3:-12910207 None:intergenic
GCAACTTCCAACTCATTTGA+TGG 0.361666 4.3:-12911751 None:intergenic
TTCTGAAGACTTGACACTTT+AGG 0.365515 4.3:-12911682 None:intergenic
TTCTGAAGAGTAGACGCTTT+AGG 0.365624 4.3:-12910138 None:intergenic
TGCTGAAGACTTGACGCTTT+AGG 0.365823 4.3:-12909383 None:intergenic
TTCTGAAGACTTGACGCTTT+AGG 0.367145 4.3:-12909762 None:intergenic
TGAGTCTGATTGGAAATTCT+TGG 0.369640 4.3:+12914798 MS.gene058829:CDS
CCTACAGCCACCAGCCTTGT+AGG 0.371248 4.3:-12913115 None:intergenic
TCAACTTCCAAATCATTTGA+TGG 0.372340 4.3:-12911305 None:intergenic
TCAGACTCATTGACGTCATC+AGG 0.373190 4.3:-12914784 None:intergenic
TTCTGAAGACTTGACACTTT+AGG 0.373672 4.3:-12910859 None:intergenic
ATGAAGCAGGCCGTTTATAT+CGG 0.376195 4.3:+12914692 MS.gene058829:CDS
TTCTGAAGACTTGACGCTTT+AGG 0.380718 4.3:-12911236 None:intergenic
GGACTCGACCTCAACAAGTT+TGG 0.381644 4.3:-12915572 None:intergenic
TCTTAAATTTCTCTTTGAAA+TGG 0.395996 4.3:-12910830 None:intergenic
TCAACTTCCAATTCAAATGA+TGG 0.401502 4.3:-12908720 None:intergenic
AGATGTGATAACAGATATTA+GGG 0.404825 4.3:+12915890 MS.gene058829:CDS
TCCTGCTCCTCTACAGAGTC+AGG 0.409851 4.3:-12911826 None:intergenic
CCGTCGCTCCTCTGCCAGTT+GGG 0.412391 4.3:-12915593 None:intergenic
ATAGTATCTTTAGTACTTTG+TGG 0.414287 4.3:-12913223 None:intergenic
TCCACTTGTTCACATTAAAA+CGG 0.416746 4.3:-12913192 None:intergenic
TTTGTAGAGGAGCAAGAAAC+AGG 0.428602 4.3:+12910237 MS.gene058829:CDS
TTTGTAGAGGAGCAGGCAAC+AGG 0.431641 4.3:+12910958 MS.gene058829:CDS
GATCAGTAATGAAGTCATTA+CGG 0.436319 4.3:-12913144 None:intergenic
AGGTTCCATGGCAAAGAGAA+AGG 0.437723 4.3:+12911648 MS.gene058829:intron
TCCTGCTCCTCTACAAGCTC+AGG 0.439898 4.3:-12909855 None:intergenic
TTGAATTGGAAGTTGATCTT+GGG 0.441555 4.3:+12908727 MS.gene058829:CDS
TTATCACATCTTCCGCCTCA+TGG 0.446333 4.3:-12915878 None:intergenic
CCACTTGTTCACATTAAAAC+GGG 0.448981 4.3:-12913191 None:intergenic
TCTTGGGTTTGTAGAGGAGC+AGG 0.450818 4.3:+12908743 MS.gene058829:CDS
AGGCTGGTGGCTGTAGGTCC+AGG 0.451683 4.3:+12913121 MS.gene058829:CDS
TCCTGAGCTTGTAGAGGAGC+AGG 0.454298 4.3:+12909854 MS.gene058829:CDS
GATGGATTATTAAGAACAAC+CGG 0.455190 4.3:-12908702 None:intergenic
CTGCCTTTAAGTCGGTGGTT+GGG 0.460613 4.3:+12915410 MS.gene058829:CDS
TTTGTAGAGGAGCAGGGGAC+AGG 0.460722 4.3:+12908750 MS.gene058829:CDS
CTTGTAGAGGAGCAGGAGAC+AGG 0.461686 4.3:+12909861 MS.gene058829:CDS
TAACAGCGGGACCCTGTGAC+TGG 0.462835 4.3:+12915110 MS.gene058829:intron
TCCTGCTCCTCTAAAACGTC+AGG 0.466770 4.3:-12911775 None:intergenic
TCCGTCGCTCCTCTGCCAGT+TGG 0.466866 4.3:-12915594 None:intergenic
TCAACTTCTAATTCATTCGA+TGG 0.467657 4.3:-12910560 None:intergenic
TTGGTAGAGCAGCAGGTGAC+AGG 0.469637 4.3:+12909482 MS.gene058829:CDS
AGGTACCATGGCAAAGAGAA+AGG 0.469697 4.3:+12908617 None:intergenic
AGGTACCATGGCAAAGAGAA+AGG 0.469697 4.3:+12910457 MS.gene058829:intron
AGTGTCAAGTCTTCAGAAGC+AGG 0.470712 4.3:+12910864 MS.gene058829:CDS
TGAGGATGAGGTGGAAGTAA+TGG 0.470828 4.3:+12915384 MS.gene058829:CDS
TCCTGACTCTGTAGAGGAGC+AGG 0.473160 4.3:+12911825 MS.gene058829:CDS
TTGCTTCAGATACAAGAGTC+AGG 0.473273 4.3:+12912999 MS.gene058829:intron
TCTTCCCTTTCTCTTTGCCA+TGG 0.473899 4.3:-12911653 None:intergenic
TCTTGAGTTTGTAGAGGAGC+AGG 0.474752 4.3:+12910951 MS.gene058829:CDS
ACAGAGAGCAAATGTCAAAT+CGG 0.476160 4.3:+12909415 MS.gene058829:CDS
ACACAGTGCAAGTGTCGAAC+CGG 0.477791 4.3:+12908683 MS.gene058829:CDS
CAACTTCCAATTCATTTGAT+GGG 0.479734 4.3:-12910206 None:intergenic
TCAGGCTCCTTTCCAGTCAC+AGG 0.480785 4.3:-12915122 None:intergenic
CAAAGAGAAATTTAAGAGGT+AGG 0.481287 4.3:+12910836 MS.gene058829:CDS
AGCGTCAAGTCTTCTGAAGA+AGG 0.484194 4.3:+12908656 MS.gene058829:CDS
GATGGATTATCAAGAACAAC+CGG 0.485164 4.3:-12911287 None:intergenic
AGCGTCAAGTCTTCAGAAGA+AGG 0.486366 4.3:+12909767 MS.gene058829:CDS
TCTTGCTTCTCTACAAACTT+GGG 0.486475 4.3:-12910584 None:intergenic
TCTGTAGAGGAGCAGGAGAC+AGG 0.487186 4.3:+12911832 MS.gene058829:CDS
TCTTCCCTTTCTCTTTGCCA+TGG 0.488381 4.3:-12908622 None:intergenic
TCTTCCCTTTCTCTTTGCCA+TGG 0.488381 4.3:-12910462 None:intergenic
TCCTGAGTTGGTAGAGCAGC+AGG 0.491712 4.3:+12909475 MS.gene058829:CDS
AGCGTCAAGTCTTCAGAAGC+AGG 0.491830 4.3:+12911241 MS.gene058829:CDS
GTCATCAGGGATATGCTTCA+AGG 0.491897 4.3:-12914770 None:intergenic
AGTGTCAAGTCTTCAGAAGA+AGG 0.492126 4.3:+12911687 MS.gene058829:CDS
TGGGAAGCAATCATATATGC+AGG 0.493010 4.3:+12915429 MS.gene058829:CDS
TGTTGAGGTCGAGTCCCAAC+TGG 0.495312 4.3:+12915579 MS.gene058829:CDS
TAATAATCCATCAAATGAGT+TGG 0.498386 4.3:+12911744 MS.gene058829:CDS
ATTTCAAAGAGAAATTTAAG+AGG 0.499593 4.3:+12910832 MS.gene058829:CDS
AGGCGTAAGAATAAAGTAAG+AGG 0.500263 4.3:+12913019 MS.gene058829:CDS
AAAGAGTGCAAATGTCAAAC+CGG 0.503507 4.3:+12911268 MS.gene058829:CDS
TATGCAGGAAATCAACAGTC+AGG 0.507449 4.3:+12915660 MS.gene058829:CDS
TGTTCGAGTTCAAGAGCTGC+AGG 0.507588 4.3:+12915486 MS.gene058829:CDS
TTCAAGATACAGATGTGGTT+CGG 0.507876 4.3:+12914656 MS.gene058829:CDS
TATATCGGAGTCGGCGCCAC+AGG 0.507889 4.3:+12914707 MS.gene058829:CDS
ATTGCAAAGAGAAAGTTAAG+AGG 0.508898 4.3:+12911209 MS.gene058829:CDS
TCTTAACTTTCTCTTTGCCA+TGG 0.510685 4.3:-12909354 None:intergenic
AGCGTCTACTCTTCAGAAGA+AGG 0.514021 4.3:+12910143 MS.gene058829:CDS
ATGACGTCAATGAGTCTGAT+TGG 0.514502 4.3:+12914788 MS.gene058829:CDS
TCTTGCTCCTCTACAAACTC+AGG 0.514826 4.3:-12910231 None:intergenic
AATCAATATACCTCAAAAGA+AGG 0.514859 4.3:-12914838 None:intergenic
CTCATTAACCCACTCCCCAT+TGG 0.514976 4.3:-12915180 None:intergenic
ACTGCCTTTAAGTCGGTGGT+TGG 0.517338 4.3:+12915409 MS.gene058829:CDS
TTTGTAGAGAAGCAAGAGAC+AGG 0.517788 4.3:+12910590 MS.gene058829:CDS
CAATGGGGAGTGGGTTAATG+AGG 0.519160 4.3:+12915181 MS.gene058829:CDS
CCTACAAGGCTGGTGGCTGT+AGG 0.522643 4.3:+12913115 MS.gene058829:CDS
GGTTCCATGGCAAAGAGAAA+GGG 0.524638 4.3:+12911649 MS.gene058829:intron
CAAAGAGAAATTTAAGAGAT+CGG 0.525583 4.3:+12909739 MS.gene058829:CDS
GGGTGGAGGCAGAGAATGCT+AGG 0.531465 4.3:+12915527 MS.gene058829:CDS
CAAAGAGAAATTTGAGAGAT+CGG 0.538439 4.3:+12910115 MS.gene058829:CDS
GGCTGAATTAGATGCCCAAA+GGG 0.538742 4.3:+12915507 MS.gene058829:CDS
AAGTACTAAAGATACTATAG+TGG 0.543254 4.3:+12913228 MS.gene058829:CDS
AATATTGAGACAATGCTGAC+TGG 0.546405 4.3:-12915696 None:intergenic
GCTAGAGAATTCTGAGGATG+AGG 0.546881 4.3:+12915372 MS.gene058829:CDS
TTACTTAAAATTTGAAACAA+AGG 0.548318 4.3:+12914741 MS.gene058829:CDS
TCTTAACTTTCTCTTTGCAA+TGG 0.548391 4.3:-12911207 None:intergenic
ATCAAAGCTAGCTGCTTGAA+AGG 0.550346 4.3:-12914998 None:intergenic
GAGTTTGTAGAGGAGGAGAC+AGG 0.551866 4.3:+12911332 MS.gene058829:CDS
AGCGTCAAGTCTTCAGCAGA+TGG 0.555256 4.3:+12909388 MS.gene058829:CDS
TGATCCCGAGTTTGTAGAGG+AGG 0.555539 4.3:+12911325 MS.gene058829:CDS
ACTGAGTCGAGATGGAAAGT+TGG 0.556259 4.3:+12913078 MS.gene058829:CDS
ACAGAGCGCAAATGTCAAAA+CGG 0.556630 4.3:+12910891 MS.gene058829:CDS
GTCTCCTCCTCTACAAACTC+GGG 0.557059 4.3:-12911329 None:intergenic
ATGTTGATATTCATCCTACA+AGG 0.557761 4.3:+12913101 MS.gene058829:CDS
TGTCTCCTCCTCTACAAACT+CGG 0.559934 4.3:-12911330 None:intergenic
GGTACCATGGCAAAGAGAAA+GGG 0.560767 4.3:+12908618 None:intergenic
GGTACCATGGCAAAGAGAAA+GGG 0.560767 4.3:+12910458 MS.gene058829:intron
CCCAACTGGCAGAGGAGCGA+CGG 0.564166 4.3:+12915593 MS.gene058829:CDS
CAAAGAGAAAGTTAAGAGGT+AGG 0.570257 4.3:+12911213 MS.gene058829:CDS
AAGGCGATTATCGATGAAGC+AGG 0.570651 4.3:+12914679 MS.gene058829:CDS
AGTTGATCTTGGGTTTGTAG+AGG 0.572021 4.3:+12908737 MS.gene058829:CDS
ATTAAGAGCCAAACTTGTTG+AGG 0.572539 4.3:+12915564 MS.gene058829:CDS
CTTGGGTTTGTAGAGGAGCA+GGG 0.572912 4.3:+12908744 MS.gene058829:CDS
GGTCGAGTCCCAACTGGCAG+AGG 0.576269 4.3:+12915585 MS.gene058829:CDS
AAGCGTAAACTGAGTCGAGA+TGG 0.581874 4.3:+12913070 MS.gene058829:CDS
ACCTGCTGCTCTACCAACTC+AGG 0.584977 4.3:-12909476 None:intergenic
ACGGAAACGAGAGGAGAGTG+AGG 0.586157 4.3:+12915612 MS.gene058829:CDS
TGATATTCATCCTACAAGGC+TGG 0.587659 4.3:+12913105 MS.gene058829:CDS
ATTAGATGCCCAAAGGGTGG+AGG 0.590973 4.3:+12915513 MS.gene058829:CDS
TCTTAAATTTCTCTTTGACA+TGG 0.592523 4.3:-12909733 None:intergenic
CAAAGAGAAAGTTAAGAGAT+CGG 0.594814 4.3:+12909360 MS.gene058829:CDS
AGATACAGATGTGGTTCGGA+AGG 0.597957 4.3:+12914660 MS.gene058829:CDS
GTGTCAAGTCTTCAGAAGCA+GGG 0.598010 4.3:+12910865 MS.gene058829:CDS
GTAATGAAGTCATTACGGCC+TGG 0.598380 4.3:-12913139 None:intergenic
AGAGAATTCTGAGGATGAGG+TGG 0.599063 4.3:+12915375 MS.gene058829:CDS
AGTTGATCTTGAGTTTGTAG+AGG 0.600145 4.3:+12910945 MS.gene058829:CDS
CAGCGGATACATCATACTAG+TGG 0.602911 4.3:+12914967 MS.gene058829:CDS
GGAAACTGCCTTTAAGTCGG+TGG 0.602974 4.3:+12915405 MS.gene058829:CDS
AGTTGATCCCGAGTTTGTAG+AGG 0.604279 4.3:+12911322 MS.gene058829:CDS
GCGGGACCCTGTGACTGGAA+AGG 0.604650 4.3:+12915115 MS.gene058829:intron
GGCGCCGACTCCGATATAAA+CGG 0.605809 4.3:-12914702 None:intergenic
CAGACTCATTGACGTCATCA+GGG 0.607592 4.3:-12914783 None:intergenic
AGAGGAGCGACGGAAACGAG+AGG 0.611564 4.3:+12915603 MS.gene058829:CDS
AGATGATCCTGACTCTGTAG+AGG 0.612790 4.3:+12911819 MS.gene058829:CDS
TTGAGACAATGCTGACTGGA+TGG 0.620427 4.3:-12915692 None:intergenic
TTGGGTTTGTAGAGGAGCAG+GGG 0.620467 4.3:+12908745 MS.gene058829:CDS
AAAGTAAGAGGACAAACAAG+AGG 0.624934 4.3:+12913031 MS.gene058829:CDS
AGTTGATCCTGAGTTTGTAG+AGG 0.626630 4.3:+12910224 MS.gene058829:CDS
AGCGGATACATCATACTAGT+GGG 0.626746 4.3:+12914968 MS.gene058829:CDS
AATGGAAACTGCCTTTAAGT+CGG 0.629497 4.3:+12915402 MS.gene058829:CDS
CAGGCTCCTTTCCAGTCACA+GGG 0.631724 4.3:-12915121 None:intergenic
ATTTGAAGTTGATCCTGAGT+TGG 0.632233 4.3:+12909463 MS.gene058829:CDS
AGTTGATCCTGAGCTTGTAG+AGG 0.632359 4.3:+12909848 MS.gene058829:CDS
GGGAAGCAATCATATATGCA+GGG 0.632925 4.3:+12915430 MS.gene058829:CDS
AGGCTGAATTAGATGCCCAA+AGG 0.633913 4.3:+12915506 MS.gene058829:CDS
ATGGCAAAGAGAAAGGGAAG+AGG 0.637485 4.3:+12908624 MS.gene058829:CDS
CAGGCCGTTTATATCGGAGT+CGG 0.645550 4.3:+12914698 MS.gene058829:CDS
AAGTAAGAGGACAAACAAGA+GGG 0.650275 4.3:+12913032 MS.gene058829:CDS
ATGGCAAAGAGAAAGGGAAG+AGG 0.656936 4.3:+12910464 MS.gene058829:CDS
TGAATTAGATGCCCAAAGGG+TGG 0.663302 4.3:+12915510 MS.gene058829:CDS
CAAAGAGAAAGGGAAGATGT+CGG 0.667696 4.3:+12911659 MS.gene058829:CDS
TGAAGCACAACTCCATGAGG+CGG 0.667829 4.3:+12915866 MS.gene058829:CDS
GAGACTTCAAGATACAGATG+TGG 0.668184 4.3:+12914651 MS.gene058829:CDS
TATTCATCCTACAAGGCTGG+TGG 0.670362 4.3:+12913108 MS.gene058829:CDS
CAAAGAGAAAGGGAAGAGGT+CGG 0.681304 4.3:+12910468 MS.gene058829:CDS
AGTAATGCTCATGAAGCCTG+TGG 0.683773 4.3:-12914723 None:intergenic
GCTTGAAGCACAACTCCATG+AGG 0.683823 4.3:+12915863 MS.gene058829:CDS
GAGTCTGCTAGAGAATTCTG+AGG 0.685882 4.3:+12915366 MS.gene058829:CDS
AGGCAAGTAAGGCAAAACAG+CGG 0.773909 4.3:+12914950 MS.gene058829:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr4.3 gene 12908624 12915941 12908624 ID=MS.gene058829
chr4.3 mRNA 12908624 12915941 12908624 ID=MS.gene058829.t1;Parent=MS.gene058829
chr4.3 exon 12908624 12908771 12908624 ID=MS.gene058829.t1.exon1;Parent=MS.gene058829.t1
chr4.3 CDS 12908624 12908771 12908624 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12909351 12909503 12909351 ID=MS.gene058829.t1.exon2;Parent=MS.gene058829.t1
chr4.3 CDS 12909351 12909503 12909351 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12909730 12909882 12909730 ID=MS.gene058829.t1.exon3;Parent=MS.gene058829.t1
chr4.3 CDS 12909730 12909882 12909730 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12910106 12910258 12910106 ID=MS.gene058829.t1.exon4;Parent=MS.gene058829.t1
chr4.3 CDS 12910106 12910258 12910106 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12910459 12910611 12910459 ID=MS.gene058829.t1.exon5;Parent=MS.gene058829.t1
chr4.3 CDS 12910459 12910611 12910459 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12910827 12910979 12910827 ID=MS.gene058829.t1.exon6;Parent=MS.gene058829.t1
chr4.3 CDS 12910827 12910979 12910827 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12911204 12911353 12911204 ID=MS.gene058829.t1.exon7;Parent=MS.gene058829.t1
chr4.3 CDS 12911204 12911353 12911204 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12911650 12911853 12911650 ID=MS.gene058829.t1.exon8;Parent=MS.gene058829.t1
chr4.3 CDS 12911650 12911853 12911650 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12913008 12913261 12913008 ID=MS.gene058829.t1.exon9;Parent=MS.gene058829.t1
chr4.3 CDS 12913008 12913261 12913008 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12914643 12914849 12914643 ID=MS.gene058829.t1.exon10;Parent=MS.gene058829.t1
chr4.3 CDS 12914643 12914849 12914643 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12914931 12915023 12914931 ID=MS.gene058829.t1.exon11;Parent=MS.gene058829.t1
chr4.3 CDS 12914931 12915023 12914931 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12915116 12915220 12915116 ID=MS.gene058829.t1.exon12;Parent=MS.gene058829.t1
chr4.3 CDS 12915116 12915220 12915116 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12915340 12915726 12915340 ID=MS.gene058829.t1.exon13;Parent=MS.gene058829.t1
chr4.3 CDS 12915340 12915726 12915340 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
chr4.3 exon 12915816 12915941 12915816 ID=MS.gene058829.t1.exon14;Parent=MS.gene058829.t1
chr4.3 CDS 12915816 12915941 12915816 ID=cds.MS.gene058829.t1;Parent=MS.gene058829.t1
Gene Sequence

>MS.gene058829

ATGGCAAAGAGAAAGGGAAGAGGTCAGCCTAAAGCGTCAAGTCTTCTGAAGAAGGTTAAACACAGTGCAAGTGTCGAACCGGTTGTTCTTAATAATCCATCATTTGAATTGGAAGTTGATCTTGGGTTTGTAGAGGAGCAGGGGACAGGTAAACATGAATTCACATTATCATATTCTGCTCCAGTTGATCTTGGGTTTGTAGAGGAGCTGTAGTCAGGGACACACAAATTCCCTTTATCTTATTCTCTTGTTTACTCCTATTTTTGTTTTTTTTTGAATCAGCTTGTTTACTCCTATTCCTTACCGGGATTTGAACACAGTCCAAATTTTGGTAAACGAATTGTTTCTAGATGCTGAATTGATAATTTTCAGGGGAAAATTGCTCATTAGGCTTCTAATATTTCTCCCAGCCACCCCAAAATTACCTTAATACCCCAAAAGGCAGTTAACTGTCGTTCGGTGAAATTTTTAAATTGGTTATACCGATTTAAAAGGTGCTTAAGCTGCTCTCAAAAGTGCCGAACAACACTTAACTGCCGTTGGAGAGCCAAGCGGTACTTAAGTGCCACTCAGGGAAGCTTAAGAGAAATTGGACAAGCCTAAAGAAAATTTTCCTTTTCAGGGCCATAATAGCACTTCAAATGGGCCTACGTGCGCCTCTACGAAAGCATATGTATGATATGTTGTTCTTAGTTCTGATTCTTTGTTTTCTGAAATTCATTTTCAGGTACCATGGCAAAGAGAAAGTTAAGAGATCGGCCTAAAGCGTCAAGTCTTCAGCAGATGGTTAAACAGAGAGCAAATGTCAAATCGGCTGTTCTTGATAATCGATCAAATGAATTTGAAGTTGATCCTGAGTTGGTAGAGCAGCAGGTGACAGGTGCACATGGATTCCCTTTATCATATTCTCTTATTAACTCCTATTCCTTACCGTGAATTGAATACAATCCAGATTTGGGTAAACGAGTTGGTTCTGGATGTTGAATTGAAATAATTTGTAGGTCCCTAATAACACTTCAAATGGGCCTACATGCTCCGCTACGAAAGCATATGTATGATTTGCTGTTCTTAATTTTGATTCTTTGTCATCTGAAATTCATTTTCAGGTACCATGTCAAAGAGAAATTTAAGAGATCGGCCTAAAGCGTCAAGTCTTCAGAAGAAGGTTAAACAGAGTGCAAATGTCAAAACAGCTGTTCTTGATAATATATCAAATGAATTGGAAGTTGATCCTGAGCTTGTAGAGGAGCAGGAGACAGGTACACATGGATTCCCTTTATCATATTATCTTGTTAATTCCTATTCCTTACTGGGAATTGAATACAATACAGATTTTGGTAAACGGGTTATTTCTGGATGTTGAATTGGAATAGTTTTCAGGGGCCTTAGAACACTTCAAATGGGCCTACATGCTCCTCTACGAAAGCATATGTATGATATGCTCTTAATTTTGATTCTTTGTTTTCTGAAATTCATTTTCAGGTACGATGCCAAAGAGAAATTTGAGAGATCGGCCTAAAGCGTCTACTCTTCAGAAGAAGGTTAAGCAGAGCGCAAATGTCAAAACAGCTGTTCTTGATAACCCATCAAATGAATTGGAAGTTGATCCTGAGTTTGTAGAGGAGCAAGAAACAGGTACACATGGATTACCTTTATCAATCATATTCTCTTATTAACTCCTATTCCTTACTGGGAATTGAATACAATCCAGATTTTGAGTTGAAATAATTTTCAGGGCCATAATAACACTTCAAATGGGCCTACAGGCTCCTCTACGAAAGCATGATATGCTGTTCTTAGTTCTGATTTTTTGTTTTCTGAAATTCATTTTTCAGGTACCATGGCAAAGAGAAAGGGAAGAGGTCGGCCTAAAGCGTCAAGTCTTTTGAAGAAGGGTAAACAAAGTGCAAATGTCAAAACAGCTGTTTTTGATAATCCATCGAATGAATTAGAAGTTGATCCCAAGTTTGTAGAGAAGCAAGAGACAGGTACACATGGATTCCCTTTATCATATTGTCTTGTTAATTCATATTCCTTATTGTGAATTGAATAGAGTCCTGATTTTGGTTTCTGGATGTTGAATTGAAATAATTTTTAGGGCCCTAATAGATCATCAAAATGGCCTACATGCTTCTTTATGAAAACATATGTATGATATGTTGTTCTTAGTTCTGATTGTTCGTTTTTTGAAATTCATTTTCAGGTACCATTTCAAAGAGAAATTTAAGAGGTAGGCCTAAAGTGTCAAGTCTTCAGAAGCAGGGTAAACAGAGCGCAAATGTCAAAACGGCTGTTCTTGATAATCCATCAAATGAATTTGAAGTTGATCTTGAGTTTGTAGAGGAGCAGGCAACAGGTACAAATGGATTCCCTTTATCATACTCTCCTGTTAACTCCTACCTTACCGGGAATTGAATGCAGTCCAGATGTTGGTAAACGAGTTGTTTCTGGATGTTGAATTGAAATAATTTTCAGGGCCCTAATAGCATTTCAAATGGGCCTACGTGCTCCTCTATGAAAGCTTATGTATGATATGCTGTTCTTAGTTCTGATTCTTTGTTTTTTGAAATTCATTTTCAGGTACCATTGCAAAGAGAAAGTTAAGAGGTAGGCCTAAAGCGTCAAGTCTTCAGAAGCAGGTTAAAAAGAGTGCAAATGTCAAACCGGTTGTTCTTGATAATCCATCAAATGATTTGGAAGTTGATCCCGAGTTTGTAGAGGAGGAGACAGGTACACATGGACTTACTTTGTCATACTCGCCTGTTCCACTTGATACTGGGTTTGTAGAGGAGTAGGAGACACGTACACATGGATTCCCGTTTTCATATTCTCTTGTTAACTTCTATTCCTTATTGGGAATTGAATACAGTCCAGATTTTGGTAAACAGATTGTGTCTGGTTGTTGAATTGAAATAATTTTTAGGGCCCTAATAGCACTTCAAATAGGCCTATATGTTCCTCTAGAAAAGCATATGTATGATATGCTGTTCTTAGTTTTGATTCTGTTTTCCAAAATTCATTTTTAGGTTCCATGGCAAAGAGAAAGGGAAGATGTCGGCCTAAAGTGTCAAGTCTTCAGAAGAAGGTTAAACAAAATTCAAATGTCGAAACTGTTGTTCTTAATAATCCATCAAATGAGTTGGAAGTTGCTCCTGACGTTTTAGAGGAGCAGGAGAATCAATCAAATGAATTGGAAGATGATCCTGACTCTGTAGAGGAGCAGGAGACAGGTACAATTTCACAATGCTCAACATTTAATTATTTCCTTCAAAACAGAACTTCAATCATCCTCCATGTTATAGTTTTACATGTTGTGTTCTGCGTGTTATAATTTAATTTATAAACTATAAATAAATTGTTTGTCTCAAATGATTTCATCAACAAAGAATTCCAAGAATACAGTTTAGAACTCAGGGGATGTAAGGTTGTTGGGGTGGGGGAATTATGGAGTGCAATGATAAGGAGGTTGAAGGTTCTATCCCCACCCACACCATAACATTAACATACAGTTCTAACATTTACTAGTAAAAGAAAACAGTTTAGAACTCCACATATTTGTTTATAGAATGAAGACATCAATGTCATTTGTTGATACGTCATAGACTTTTAACATATCAATTCTGTTTATATTCTGCAATGAATATGTTAAAAATCAGTGCCCGAGGGTAAGGCCACTAAAGCCCTCGCTTTAGGCCTACCGGCAAAAAAAATCATTAGATTTTATAGGGAAAAGGCCTCACATGCAGACACAAAAGCCTCATATATCAAAACTTGCTTTGAGCCTCACTTATTTTTGAGGATTATTGGTCCGGCCCTGTATGAAAGGAAGAAATTGCTGCAACGTTGCATTATTTGAGATTATTTTGTTTGATATTAATTGAGGATATTCTACAAAATCATTAATCGAAAAAGTCAAGATTGAGAGAAACCATAATTTATAATATATTATAGATTATAAATAATAGATGGCATGACATACTTAGTAATCGACTCAACAACAACAACCAAGCCTTATCCCACTACGTGGCTATGGAATGCGAGAAAAACTTAGGATTTGAACCTAGTACATACTATACTTAGTAATCAACTCGAGTAATTAATTTATAGTTGGTCTGTAAGTTTGCTTGGTGTCCTTTATTCCATTCTTAAAAACGATAGTTAAGAATAATTTCAATTGCAGATGTCTTATTATTAATGGTTTTTGTATGTTTTAGAATTGTTAATGCAAAGGGGACCAGGGCGACCAAGAGGGTCAATGAATCAGAATAACCATCCACAGAATGCAGATGGAAAGTTGAATGTTTTCATTTCAATGGTTCTATAGTTCATGGCTTTGAGGCTATATTTGAAAATTCTCTTATTTTCCTATTGTATTTTGCTTCAGATACAAGAGTCAGGCGTAAGAATAAAGTAAGAGGACAAACAAGAGGGTTGCTGCTTGAAATGAAGCGTAAACTGAGTCGAGATGGAAAGTTGGATGTTGATATTCATCCTACAAGGCTGGTGGCTGTAGGTCCAGGCCGTAATGACTTCATTACTGATCTTTCTATTATTGTTCGCAAGAACGCCCGTTTTAATGTGAACAAGTGGAGCAGTGTTCCACAAAGTACTAAAGATACTATAGTGGAAAAAGTTCTGGTATGTTATTGGCATTCACGTTGATTCTGGTTTGTTTTACTTGTGATTATCGTTCTTATAGCTGTCAATTAAGCCCCACCCACTAAGCCGTCTGATTATGTCCCCCAGTTGAGGGGACTCTATTTTGGCCCCAGCCAATTAAGTTAATAACGTGGGGGCTTCAAGGTCCCCATAGAAGAAATCCACACCAACGTAGTCACATAGCTCCACCTCTCTGTTTCATGTCATCCTCTGTCTTGCTCATTTTCATGTTCAAACTTTTTTGTTAGTTTTGTATTGATTCAGTTTTATACGACATGTAAATGATTTGCCGATAAATCATGTGTTTTTTTTATGGAAAAATTTAGTGGTTCTATATAGTTTTTTTTACCCTCTCATATTATGAAAATTATTATAATTTTATGTCGATTGGTCTGTTATATTTTGCCACGTTATTAGATTATAAATATGCCACTCTCACGTTGTATAACATTAAGATCACACATTCAGTAGAGCTATGCCCAAAGTAGTCCTTATAAGGCTCAGGACTTTTGATGTGTGTGTTGGAAACACTGGCTGCCTTCATTGCAGTCATCATACATCCATGCCCCAAAGGTCCAGTGGTAGGCGTGAGGGGATTTGTTGGAGACCGTTGCTGCCATCCTGGCATTCCATCATACCATCATTTGTTCATATTAAAATTTGACTAAGGTCTAACGCAACCCAAAAAGCTAGCTCATGGGATGACGAGTAAGGAGTGACGAAACTTTCTACGGACCACTTTGGCCATATCTTCGATGTGGGGACTCAGCGTAACCCCTATGGCATTAGAAAACATATTGGTTTTACATTTGAGACAGTTCTTCCTTTCTTGAAATTTTTGCCCAATTTTTTGGAATATCATGTTCTTTTTTTTTTTTTGGGGGGTGTGTGTGTTGGAGTTTATTAAATATCAATTGTTAGTGACAGAGTAGAGTATCAATGCTTTGAACAACTAGTTGCAGAGGTTGGAAGGACAGCGGGTTGGCTTAAAATAGGAGGAAGATATAAGTTAGTTCATTCGTATTTTTTGCATTGAGTAAAATGTGTCATGGCACAGTTGTAAGGGTAAGGGAAAATCCTTGGAGGAGAGACTTCTCTTCCGTACTACATTGGTGTGTGTTTTAATTACGGTATTTGCCATCTATAAAAAAGTACAGTCTTGCTTGTATGTGTTCTCTTATGTTGTATTCTAGTGTTCTTCCCTAGCTGCTCTTCTACTTGTACTTTGTGTCTCCGCAGAAGCTCCATTTGTTCTGTTTTGACTCTGGCGAAATTTATTTCCTCCAATTTGTTTTCTTCGAAATTTATTGAGGATTGTGGATGAGGAATTTTTTAGTTTAAAGAAGTATTCTTTTCACAGAACAATTGGAGACTTCAAGATACAGATGTGGTTCGGAAGGCGATTATCGATGAAGCAGGCCGTTTATATCGGAGTCGGCGCCACAGGCTTCATGAGCATTACTTAAAATTTGAAACAAAGGAAGAAGCCTTGAAGCATATCCCTGATGACGTCAATGAGTCTGATTGGAAATTCTTGGTTGATTATTTTAGCAGTCCTTCTTTTGAGGTATATTGATTTATATTGTTCCTATCCTACCCTGTAAATTTTAATAAATTCCATAACATGTTTTTTGTCAATATTATTCAGATAAGGAGCATTAAAAACAAGGCAAGTAAGGCAAAACAGCGGATACATCATACTAGTGGGCAGAAGTCCTTTCAAGCAGCTAGCTTTGATGCAGTAAGATGTCGATTTTACATGGTGTTGTGCCTTGTCAAATCGTGTGACTTTTTTTTGTTATTAACAGTCTAACTAGGATATGCATCTAACAGCGGGACCCTGTGACTGGAAAGGAGCCTGATTTGCAGACATTATGGCAGATAACACACAAAAAGGCCAATGGGGAGTGGGTTAATGAGGCATCTAAGCAAATACATGTAATCACGTTTTAAATCACTGTTGCAATTTTATATATAACTTGAATTTGATGTTCCGCCACTTGTTTAAATTGTGGACTGTTGTATTGTATTTGTAATTGTAATTGTATTCATTATAGGACAAGGTTGCTGAACAAATCAATGAGAGTCTGCTAGAGAATTCTGAGGATGAGGTGGAAGTAATGGAAACTGCCTTTAAGTCGGTGGTTGGGAAGCAATCATATATGCAGGGTTTTGGAGAAGGATTGAGGTCAGCAACAAGCTCTGTTCGAGTTCAAGAGCTGCAGGCTGAATTAGATGCCCAAAGGGTGGAGGCAGAGAATGCTAGGAAAGAATGCAATGAATTAAGAGCCAAACTTGTTGAGGTCGAGTCCCAACTGGCAGAGGAGCGACGGAAACGAGAGGAGAGTGAGGCTCGACTACTGTATCGTCAAAAAGATATGCAGGAAATCAACAGTCAGGTTCAGACTGCCATCCAGTCAGCATTGTCTCAATATTGTCCACGAGTGAGTATAAAAGATAAACATATTTACGATCATTGGGTCAAACTGCTTTTAATTTTGAAATTACATTAACCTATGTTTTTTTGTGATAGAAAACTGATGAAGAGACCTCATCAGACGATAAAGAAAAGATTGCAGAGCTTGAAGCACAACTCCATGAGGCGGAAGATGTGATAACAGATATTAGGGCAGAATTAGCTAGATATCGCTTGTATTAG

Protein sequence

>MS.gene058829.t1

MAKRKGRGQPKASSLLKKVKHSASVEPVVLNNPSFELEVDLGFVEEQGTGTMAKRKLRDRPKASSLQQMVKQRANVKSAVLDNRSNEFEVDPELVEQQVTGTMSKRNLRDRPKASSLQKKVKQSANVKTAVLDNISNELEVDPELVEEQETGTMPKRNLRDRPKASTLQKKVKQSANVKTAVLDNPSNELEVDPEFVEEQETGTMAKRKGRGRPKASSLLKKGKQSANVKTAVFDNPSNELEVDPKFVEKQETGTISKRNLRGRPKVSSLQKQGKQSANVKTAVLDNPSNEFEVDLEFVEEQATGTIAKRKLRGRPKASSLQKQVKKSANVKPVVLDNPSNDLEVDPEFVEEETGSMAKRKGRCRPKVSSLQKKVKQNSNVETVVLNNPSNELEVAPDVLEEQENQSNELEDDPDSVEEQETDTRVRRKNKVRGQTRGLLLEMKRKLSRDGKLDVDIHPTRLVAVGPGRNDFITDLSIIVRKNARFNVNKWSSVPQSTKDTIVEKVLNNWRLQDTDVVRKAIIDEAGRLYRSRRHRLHEHYLKFETKEEALKHIPDDVNESDWKFLVDYFSSPSFEIRSIKNKASKAKQRIHHTSGQKSFQAASFDARDPVTGKEPDLQTLWQITHKKANGEWVNEASKQIHDKVAEQINESLLENSEDEVEVMETAFKSVVGKQSYMQGFGEGLRSATSSVRVQELQAELDAQRVEAENARKECNELRAKLVEVESQLAEERRKREESEARLLYRQKDMQEINSQVQTAIQSALSQYCPRKTDEETSSDDKEKIAELEAQLHEAEDVITDIRAELARYRLY