Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55175.t1 | XP_003616632.1 | 96.4 | 555 | 20 | 0 | 1 | 555 | 1 | 555 | 0.00E+00 | 1093.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55175.t1 | Q8GV43 | 52.2 | 579 | 228 | 11 | 3 | 558 | 12 | 564 | 4.5e-162 | 572.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55175.t1 | G7KH08 | 96.4 | 555 | 20 | 0 | 1 | 555 | 1 | 555 | 0.0e+00 | 1093.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051122 | MS.gene55175 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene052464 | MS.gene55175 | 0.816016 | 6.87E-52 | -1.69E-46 |
| MS.gene052674 | MS.gene55175 | 0.830066 | 3.62E-55 | -1.69E-46 |
| MS.gene052675 | MS.gene55175 | 0.822222 | 2.66E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene55175 | 0.828234 | 1.01E-54 | -1.69E-46 |
| MS.gene054479 | MS.gene55175 | 0.80639 | 8.42E-50 | -1.69E-46 |
| MS.gene055701 | MS.gene55175 | 0.821796 | 3.34E-53 | -1.69E-46 |
| MS.gene056779 | MS.gene55175 | 0.808484 | 3.03E-50 | -1.69E-46 |
| MS.gene057194 | MS.gene55175 | 0.819536 | 1.10E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene55175 | 0.839333 | 1.69E-57 | -1.69E-46 |
| MS.gene059952 | MS.gene55175 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene55175 | 0.813236 | 2.83E-51 | -1.69E-46 |
| MS.gene060850 | MS.gene55175 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene060851 | MS.gene55175 | 0.83362 | 4.80E-56 | -1.69E-46 |
| MS.gene060852 | MS.gene55175 | 0.835639 | 1.49E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55175.t1 | MTR_5g082580 | 96.396 | 555 | 20 | 0 | 1 | 555 | 1 | 555 | 0.0 | 1121 |
| MS.gene55175.t1 | MTR_5g082590 | 58.802 | 551 | 208 | 7 | 8 | 558 | 2 | 533 | 0.0 | 648 |
| MS.gene55175.t1 | MTR_3g070710 | 57.904 | 544 | 210 | 9 | 14 | 555 | 10 | 536 | 0.0 | 608 |
| MS.gene55175.t1 | MTR_3g070560 | 58.834 | 549 | 203 | 10 | 12 | 555 | 7 | 537 | 0.0 | 603 |
| MS.gene55175.t1 | MTR_5g071010 | 53.442 | 552 | 243 | 6 | 11 | 558 | 4 | 545 | 0.0 | 590 |
| MS.gene55175.t1 | MTR_5g082620 | 50.271 | 553 | 252 | 9 | 11 | 558 | 6 | 540 | 0.0 | 537 |
| MS.gene55175.t1 | MTR_3g070720 | 51.371 | 547 | 239 | 8 | 19 | 558 | 18 | 544 | 9.20e-179 | 518 |
| MS.gene55175.t1 | MTR_3g069280 | 51.648 | 546 | 230 | 9 | 19 | 558 | 6 | 523 | 1.74e-178 | 516 |
| MS.gene55175.t1 | MTR_3g070720 | 50.000 | 500 | 223 | 8 | 19 | 511 | 18 | 497 | 5.93e-155 | 454 |
| MS.gene55175.t1 | MTR_5g071040 | 44.424 | 547 | 257 | 10 | 11 | 555 | 20 | 521 | 9.79e-151 | 446 |
| MS.gene55175.t1 | MTR_3g070560 | 59.200 | 375 | 136 | 8 | 185 | 555 | 3 | 364 | 2.52e-148 | 434 |
| MS.gene55175.t1 | MTR_3g070720 | 48.941 | 472 | 214 | 8 | 19 | 483 | 18 | 469 | 8.19e-138 | 410 |
| MS.gene55175.t1 | MTR_3g070720 | 47.506 | 421 | 194 | 8 | 19 | 432 | 18 | 418 | 3.59e-112 | 342 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55175.t1 | AT2G40116 | 51.706 | 586 | 234 | 11 | 3 | 565 | 12 | 571 | 0.0 | 580 |
| MS.gene55175.t1 | AT5G58700 | 51.083 | 554 | 250 | 8 | 11 | 558 | 10 | 548 | 0.0 | 549 |
| MS.gene55175.t1 | AT5G58700 | 51.083 | 554 | 250 | 8 | 11 | 558 | 10 | 548 | 0.0 | 549 |
| MS.gene55175.t1 | AT3G08510 | 50.182 | 550 | 249 | 9 | 11 | 558 | 6 | 532 | 0.0 | 536 |
| MS.gene55175.t1 | AT3G08510 | 50.182 | 550 | 249 | 9 | 11 | 558 | 6 | 532 | 0.0 | 536 |
| MS.gene55175.t1 | AT5G58690 | 48.561 | 556 | 250 | 6 | 11 | 561 | 8 | 532 | 0.0 | 530 |
| MS.gene55175.t1 | AT5G58690 | 48.561 | 556 | 250 | 6 | 11 | 561 | 8 | 532 | 0.0 | 530 |
| MS.gene55175.t1 | AT5G58690 | 49.444 | 540 | 237 | 6 | 27 | 561 | 5 | 513 | 0.0 | 527 |
| MS.gene55175.t1 | AT3G55940 | 50.090 | 555 | 245 | 11 | 11 | 558 | 6 | 535 | 0.0 | 524 |
| MS.gene55175.t1 | AT5G58700 | 54.709 | 446 | 187 | 6 | 119 | 558 | 4 | 440 | 4.18e-164 | 477 |
| MS.gene55175.t1 | AT3G08510 | 46.727 | 550 | 239 | 10 | 11 | 558 | 6 | 503 | 1.53e-162 | 475 |
| MS.gene55175.t1 | AT3G08510 | 46.727 | 550 | 239 | 10 | 11 | 558 | 6 | 503 | 1.53e-162 | 475 |
| MS.gene55175.t1 | AT5G58670 | 44.182 | 550 | 253 | 12 | 11 | 554 | 5 | 506 | 7.61e-152 | 448 |
| MS.gene55175.t1 | AT4G38530 | 43.223 | 546 | 257 | 13 | 19 | 558 | 13 | 511 | 3.41e-143 | 426 |
| MS.gene55175.t1 | AT3G47290 | 37.381 | 527 | 259 | 15 | 38 | 559 | 25 | 485 | 2.38e-97 | 307 |
| MS.gene55175.t1 | AT3G47290 | 37.381 | 527 | 259 | 15 | 38 | 559 | 25 | 485 | 1.10e-96 | 306 |
| MS.gene55175.t1 | AT3G47220 | 36.822 | 516 | 241 | 17 | 55 | 559 | 44 | 485 | 3.29e-90 | 288 |
Find 111 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCTTAAGTTTCTTATTT+TGG | 0.118300 | 5.2:-70529915 | None:intergenic |
| CCTCCTATGACGTCCTTATT+TGG | 0.159499 | 5.2:+70532236 | MS.gene55175:CDS |
| CGAGGAGAATTTCACGTTAT+TGG | 0.170735 | 5.2:+70528518 | MS.gene55175:CDS |
| GTGTTATAGAACTTGATTTA+TGG | 0.172616 | 5.2:+70529067 | MS.gene55175:CDS |
| TATAGAACTGTTTCCAAATA+AGG | 0.209201 | 5.2:-70532249 | None:intergenic |
| GGTTTCTGCATTAGAATTTC+AGG | 0.209969 | 5.2:-70530874 | None:intergenic |
| TTCTCTCAGGACCATGAAAT+TGG | 0.251064 | 5.2:+70532188 | MS.gene55175:intron |
| TTGGAGTCTATCAAGAAATA+TGG | 0.288156 | 5.2:+70529260 | MS.gene55175:CDS |
| GGACACAATTCCTTCCTTAC+TGG | 0.299080 | 5.2:+70528982 | MS.gene55175:CDS |
| TATTGATTATACCAATTTCA+TGG | 0.323180 | 5.2:-70532199 | None:intergenic |
| CAGATGGCAACTCAAATATT+TGG | 0.332400 | 5.2:+70529449 | MS.gene55175:intron |
| TGTTGCAGCGCCTTTATGAT+TGG | 0.348377 | 5.2:-70529036 | None:intergenic |
| GAAGAAAACAAAAGTAATAA+TGG | 0.354019 | 5.2:+70531723 | MS.gene55175:CDS |
| TTCACTGGCATAATCCTTGT+AGG | 0.368179 | 5.2:-70530919 | None:intergenic |
| TCACATTATTTCATATATAC+AGG | 0.373381 | 5.2:+70528961 | MS.gene55175:CDS |
| GAGGGAGACGCGGGTTCATA+TGG | 0.374246 | 5.2:+70529835 | MS.gene55175:CDS |
| AATCCAAAATAAGAAACTTA+AGG | 0.376008 | 5.2:+70529912 | MS.gene55175:CDS |
| ATGAAATTGGTATAATCAAT+AGG | 0.377496 | 5.2:+70532201 | MS.gene55175:CDS |
| CAAAAGTAATAATGGACAAT+TGG | 0.378453 | 5.2:+70531731 | MS.gene55175:CDS |
| GGCAACTATCATGCTCTAGA+TGG | 0.380322 | 5.2:+70529611 | MS.gene55175:CDS |
| TGTATCACCTATCAAATGTT+TGG | 0.381688 | 5.2:+70529241 | MS.gene55175:CDS |
| CCACATCTTGGTTGGATGTA+TGG | 0.385766 | 5.2:+70530201 | MS.gene55175:CDS |
| TCCACTTCAATTGTAGAATC+TGG | 0.391302 | 5.2:-70529677 | None:intergenic |
| TTACGACAGGTTGGTATTGT+TGG | 0.393338 | 5.2:+70531679 | MS.gene55175:intron |
| ATAGACTCCAAACATTTGAT+AGG | 0.395008 | 5.2:-70529248 | None:intergenic |
| ACAAATTTCAAGCCACATCT+TGG | 0.397778 | 5.2:+70530189 | MS.gene55175:CDS |
| TTCTTCCTTGCAATGTCAGC+AGG | 0.404340 | 5.2:-70531706 | None:intergenic |
| ATCCAAAATAAGAAACTTAA+GGG | 0.420003 | 5.2:+70529913 | MS.gene55175:CDS |
| TGCTTAGTTGATTTCCAGTA+AGG | 0.430931 | 5.2:-70528996 | None:intergenic |
| AAACATTTGATAGGTGATAC+AGG | 0.433878 | 5.2:-70529239 | None:intergenic |
| CTCATGGAACAGACATCATT+AGG | 0.435189 | 5.2:+70530019 | MS.gene55175:CDS |
| ATATCTTCTTTACTAGAAGT+TGG | 0.441522 | 5.2:-70529090 | None:intergenic |
| CAAGGAATGTTCAGAGCAAA+TGG | 0.442876 | 5.2:+70530829 | MS.gene55175:CDS |
| AGGTTGTTTCGCTCCAACTT+AGG | 0.451502 | 5.2:-70529978 | None:intergenic |
| GATTTGACACGTGTCGCCCT+AGG | 0.453433 | 5.2:-70530165 | None:intergenic |
| CTGACCTTTGTGTAAAAGTC+TGG | 0.458406 | 5.2:-70531115 | None:intergenic |
| CTTAAACATTCTGCTGGTTG+AGG | 0.462468 | 5.2:-70529488 | None:intergenic |
| TTGGACTTAAAACGTTCTTT+CGG | 0.467487 | 5.2:-70529572 | None:intergenic |
| ATTTGAAGTAAAGCAAGCTC+TGG | 0.468190 | 5.2:-70531796 | None:intergenic |
| GAAGATATTAAAGTTGATCA+TGG | 0.470581 | 5.2:+70529105 | MS.gene55175:CDS |
| GCCGTTGTCCTTGATCCGGT+TGG | 0.472915 | 5.2:-70529591 | None:intergenic |
| TCGCCCTTGATGATATCTTC+CGG | 0.475989 | 5.2:+70528628 | MS.gene55175:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 5.2:+70530230 | MS.gene55175:CDS |
| GTTAAACTTAAACATTCTGC+TGG | 0.482099 | 5.2:-70529494 | None:intergenic |
| AAAATCTCCTTGAGGTCCTC+AGG | 0.484345 | 5.2:-70528423 | None:intergenic |
| CAGTGAAGAACCAATCATAA+AGG | 0.485723 | 5.2:+70529026 | MS.gene55175:CDS |
| TTTCCAAATAAGGACGTCAT+AGG | 0.488340 | 5.2:-70532239 | None:intergenic |
| ATTTCAAGCCACATCTTGGT+TGG | 0.488655 | 5.2:+70530193 | MS.gene55175:CDS |
| ATATACTTAGGGTGTACCCT+AGG | 0.488798 | 5.2:+70530148 | MS.gene55175:CDS |
| GAGCGAAACAACCTTAGAAA+AGG | 0.490928 | 5.2:+70529987 | MS.gene55175:CDS |
| TTTAACAGAATTTCCTTCAC+CGG | 0.497230 | 5.2:+70529511 | MS.gene55175:CDS |
| CGGTTTCTTGTGGAGCATCA+AGG | 0.501212 | 5.2:+70528495 | MS.gene55175:CDS |
| GTGAACTTAGACGCCTAAGT+TGG | 0.503997 | 5.2:+70529965 | MS.gene55175:CDS |
| GCAAGCTCTGGAACAGTCAA+AGG | 0.505738 | 5.2:-70531784 | None:intergenic |
| GCAATTACATCGGTTTCTTG+TGG | 0.510508 | 5.2:+70528485 | MS.gene55175:CDS |
| AGTTGCCGTTGTCCTTGATC+CGG | 0.511054 | 5.2:-70529595 | None:intergenic |
| GAAAAGGCTTCAGAATCTCA+TGG | 0.512234 | 5.2:+70530003 | MS.gene55175:CDS |
| AAGGAGCATTGAAATCATCT+AGG | 0.512950 | 5.2:-70528659 | None:intergenic |
| AAGATGTGGCTTGAAATTTG+TGG | 0.522605 | 5.2:-70530187 | None:intergenic |
| ATCATCAGAAGAAGAATCAT+CGG | 0.530210 | 5.2:+70529643 | MS.gene55175:CDS |
| GCAGCTGAGAAGGATACATC+AGG | 0.533113 | 5.2:+70528569 | MS.gene55175:CDS |
| TTCAGAGCAAATGGAGGATG+TGG | 0.534038 | 5.2:+70530838 | MS.gene55175:CDS |
| TCATCAGAAGAAGAATCATC+GGG | 0.538026 | 5.2:+70529644 | MS.gene55175:CDS |
| TTTCTACCTCGATAGGGGTT+AGG | 0.540816 | 5.2:+70530787 | MS.gene55175:intron |
| TAGTTGATTTCCAGTAAGGA+AGG | 0.543182 | 5.2:-70528992 | None:intergenic |
| TGAAGTGGAGATTAATAGTA+CGG | 0.546568 | 5.2:+70529691 | MS.gene55175:CDS |
| AAATTTACATGGGACATGGT+TGG | 0.547253 | 5.2:+70531050 | MS.gene55175:CDS |
| GCCAGATTCTACAATTGAAG+TGG | 0.550059 | 5.2:+70529676 | MS.gene55175:CDS |
| GACTTAAAACGTTCTTTCGG+AGG | 0.550648 | 5.2:-70529569 | None:intergenic |
| AATGGAAGTGATAGCGATGA+GGG | 0.559246 | 5.2:+70529817 | MS.gene55175:CDS |
| GACTGAGCTGGTTCCACCTG+AGG | 0.559769 | 5.2:+70528407 | MS.gene55175:CDS |
| GGTTCCACCTGAGGACCTCA+AGG | 0.560917 | 5.2:+70528416 | MS.gene55175:CDS |
| TCAAACTCATCGTCACATTG+AGG | 0.562410 | 5.2:-70530895 | None:intergenic |
| AAAGTACAAGGTGACTGAGC+TGG | 0.562581 | 5.2:+70528395 | MS.gene55175:CDS |
| ACGATGAGTTTGATCCTACA+AGG | 0.562900 | 5.2:+70530905 | MS.gene55175:CDS |
| CAATGCTCCTTTGAAAACCG+AGG | 0.563473 | 5.2:+70528671 | MS.gene55175:CDS |
| ATTTGACACGTGTCGCCCTA+GGG | 0.563743 | 5.2:-70530164 | None:intergenic |
| ATCATAAAGGCGCTGCAACA+AGG | 0.565020 | 5.2:+70529039 | MS.gene55175:CDS |
| CCAAATAAGGACGTCATAGG+AGG | 0.568642 | 5.2:-70532236 | None:intergenic |
| AGAAGAAGAATCATCGGGAA+AGG | 0.569568 | 5.2:+70529649 | MS.gene55175:CDS |
| CAAGCTCTGGAACAGTCAAA+GGG | 0.571677 | 5.2:-70531783 | None:intergenic |
| TTGGATGTATGGAGCTCAGA+TGG | 0.573916 | 5.2:+70530212 | MS.gene55175:CDS |
| ATTATTTCAAGAGTGTTCAC+CGG | 0.574429 | 5.2:+70529870 | MS.gene55175:CDS |
| TGACATGTATGATCCTCCTC+CGG | 0.578192 | 5.2:-70528457 | None:intergenic |
| AGGGGTTAGGCAGATCACTC+TGG | 0.583024 | 5.2:+70530800 | MS.gene55175:intron |
| ATGTTGATCAAAGTAGAGAA+AGG | 0.584587 | 5.2:+70528601 | MS.gene55175:CDS |
| ATATTAAAGTTGATCATGGA+TGG | 0.592217 | 5.2:+70529109 | MS.gene55175:CDS |
| ATCTCCTTGAGGTCCTCAGG+TGG | 0.594384 | 5.2:-70528420 | None:intergenic |
| TCTTCTATAGTTATGATCAC+AGG | 0.596274 | 5.2:-70529302 | None:intergenic |
| AGATCACTCTGGTTGATGCA+AGG | 0.597460 | 5.2:+70530811 | MS.gene55175:CDS |
| AAAGATAAATTGAAAACTGA+TGG | 0.597987 | 5.2:+70529943 | MS.gene55175:CDS |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.605391 | 5.2:-70531112 | None:intergenic |
| AAAACCGGAAGATATCATCA+AGG | 0.612633 | 5.2:-70528632 | None:intergenic |
| TGATAGCGATGAGGGAGACG+CGG | 0.617630 | 5.2:+70529825 | MS.gene55175:CDS |
| GATAGCGATGAGGGAGACGC+GGG | 0.620564 | 5.2:+70529826 | MS.gene55175:CDS |
| AGAGAACATATCAAAGTGTG+TGG | 0.622904 | 5.2:-70531089 | None:intergenic |
| TATACTTAGGGTGTACCCTA+GGG | 0.624728 | 5.2:+70530149 | MS.gene55175:CDS |
| AAGAAACCGATGTAATTGCT+CGG | 0.626617 | 5.2:-70528481 | None:intergenic |
| TGGACAATTGGTTTCCTGTG+TGG | 0.630722 | 5.2:+70531743 | MS.gene55175:CDS |
| CCATACATCCAACCAAGATG+TGG | 0.631436 | 5.2:-70530201 | None:intergenic |
| GTATGCCTGCTGACATTGCA+AGG | 0.644882 | 5.2:+70531701 | MS.gene55175:CDS |
| TATATGAAATAATGTGACAA+TGG | 0.645807 | 5.2:-70528955 | None:intergenic |
| TCTTGTGGAGCATCAAGGCG+AGG | 0.647884 | 5.2:+70528500 | MS.gene55175:CDS |
| AAACCGGAAGATATCATCAA+GGG | 0.650005 | 5.2:-70528631 | None:intergenic |
| GAATGGAAGTGATAGCGATG+AGG | 0.651551 | 5.2:+70529816 | MS.gene55175:intron |
| GAGAACATATCAAAGTGTGT+GGG | 0.660094 | 5.2:-70531088 | None:intergenic |
| TCAAACTCTTCATTCCACAC+AGG | 0.668818 | 5.2:-70531757 | None:intergenic |
| GGAATGTTCAGAGCAAATGG+AGG | 0.692479 | 5.2:+70530832 | MS.gene55175:CDS |
| TCCAACCGGATCAAGGACAA+CGG | 0.693783 | 5.2:+70529590 | MS.gene55175:CDS |
| TGTCAACCGAGCAATTACAT+CGG | 0.739747 | 5.2:+70528475 | MS.gene55175:CDS |
| ATAGATATTATCATCACACG+TGG | 0.755348 | 5.2:-70532283 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAGAATATCAATATA+CGG | - | chr5.2:70532135-70532154 | None:intergenic | 10.0% |
| !! | ATCATGTTAAAATATAAATA+GGG | + | chr5.2:70530489-70530508 | MS.gene55175:intron | 10.0% |
| !!! | AATTTCAAGATTTAATTTAT+TGG | - | chr5.2:70530540-70530559 | None:intergenic | 10.0% |
| !! | AAAGTAGTAAGAAAAAAAAA+AGG | - | chr5.2:70530769-70530788 | None:intergenic | 15.0% |
| !! | ATAATCCAAAAATATTTGTT+TGG | - | chr5.2:70531175-70531194 | None:intergenic | 15.0% |
| !! | ATGTTAATATGTTTAATAAC+AGG | + | chr5.2:70531024-70531043 | MS.gene55175:intron | 15.0% |
| !! | CATCATGTTAAAATATAAAT+AGG | + | chr5.2:70530488-70530507 | MS.gene55175:intron | 15.0% |
| !! | TATTGTTTATATAGTCTAAA+TGG | - | chr5.2:70529137-70529156 | None:intergenic | 15.0% |
| !! | TCTAATAGAAAAAAAAATAG+AGG | + | chr5.2:70531444-70531463 | MS.gene55175:intron | 15.0% |
| !!! | AGATTTAATTTATTGGAAAT+TGG | - | chr5.2:70530533-70530552 | None:intergenic | 15.0% |
| !!! | CTAATTTTTCAAATTATTGT+CGG | + | chr5.2:70530661-70530680 | MS.gene55175:intron | 15.0% |
| !!! | TAATGGTTAACTTTTTTTTT+TGG | + | chr5.2:70532034-70532053 | MS.gene55175:intron | 15.0% |
| !!! | TTTTTTTGTTTTTATCAGAA+TGG | + | chr5.2:70529799-70529818 | MS.gene55175:intron | 15.0% |
| !! | AAAATTATCGATGTAAGATT+AGG | + | chr5.2:70531248-70531267 | MS.gene55175:intron | 20.0% |
| !! | AAAGATAAATTGAAAACTGA+TGG | + | chr5.2:70529943-70529962 | MS.gene55175:CDS | 20.0% |
| !! | AAATTATCGATGTAAGATTA+GGG | + | chr5.2:70531249-70531268 | MS.gene55175:intron | 20.0% |
| !! | AATCCAAAATAAGAAACTTA+AGG | + | chr5.2:70529912-70529931 | MS.gene55175:CDS | 20.0% |
| !! | ATAACAGGTAAAAATTTACA+TGG | + | chr5.2:70531039-70531058 | MS.gene55175:intron | 20.0% |
| !! | ATAGAAAAAAAAATAGAGGT+AGG | + | chr5.2:70531448-70531467 | MS.gene55175:intron | 20.0% |
| !! | ATCCAAAATAAGAAACTTAA+GGG | + | chr5.2:70529913-70529932 | MS.gene55175:CDS | 20.0% |
| !! | ATGAAATTGGTATAATCAAT+AGG | + | chr5.2:70532201-70532220 | MS.gene55175:CDS | 20.0% |
| !! | ATGAATATTGAGATTAGAAA+AGG | - | chr5.2:70529396-70529415 | None:intergenic | 20.0% |
| !! | ATTATATCAAAATACACGAA+AGG | - | chr5.2:70528868-70528887 | None:intergenic | 20.0% |
| !! | CACACAAAAAAATATACTTA+GGG | + | chr5.2:70530137-70530156 | MS.gene55175:CDS | 20.0% |
| !! | GAAGAAAACAAAAGTAATAA+TGG | + | chr5.2:70531723-70531742 | MS.gene55175:CDS | 20.0% |
| !! | GTAATGTAATTAATTCATCT+AGG | + | chr5.2:70531991-70532010 | MS.gene55175:intron | 20.0% |
| !! | TAAAATTGAGTAATGTACTA+TGG | - | chr5.2:70530967-70530986 | None:intergenic | 20.0% |
| !! | TAACAAAACTAGAAAACTTA+AGG | - | chr5.2:70528837-70528856 | None:intergenic | 20.0% |
| !! | TAACAGGTAAAAATTTACAT+GGG | + | chr5.2:70531040-70531059 | MS.gene55175:intron | 20.0% |
| !! | TACCATATCATATCTTATAA+AGG | + | chr5.2:70530735-70530754 | MS.gene55175:intron | 20.0% |
| !! | TAGAAAAAAAAATAGAGGTA+GGG | + | chr5.2:70531449-70531468 | MS.gene55175:intron | 20.0% |
| !! | TATATGAAATAATGTGACAA+TGG | - | chr5.2:70528958-70528977 | None:intergenic | 20.0% |
| !! | TCACACAAAAAAATATACTT+AGG | + | chr5.2:70530136-70530155 | MS.gene55175:CDS | 20.0% |
| !! | TCACATTATTTCATATATAC+AGG | + | chr5.2:70528961-70528980 | MS.gene55175:CDS | 20.0% |
| !! | TTATATGTATATCTTACAGT+TGG | + | chr5.2:70531648-70531667 | MS.gene55175:intron | 20.0% |
| !! | TTCCTTTATAAGATATGATA+TGG | - | chr5.2:70530740-70530759 | None:intergenic | 20.0% |
| !!! | AAAAGGTAAATTCTTTTGTT+TGG | + | chr5.2:70530986-70531005 | MS.gene55175:intron | 20.0% |
| !!! | GTACATTACTCAATTTTAAA+AGG | + | chr5.2:70530969-70530988 | MS.gene55175:intron | 20.0% |
| !!! | TAAATCCTTCATCTTTTTAA+TGG | + | chr5.2:70532017-70532036 | MS.gene55175:intron | 20.0% |
| !!! | TATTGATTATACCAATTTCA+TGG | - | chr5.2:70532202-70532221 | None:intergenic | 20.0% |
| ! | AGTCCCTTTATATAATGAAA+AGG | + | chr5.2:70531909-70531928 | MS.gene55175:intron | 25.0% |
| ! | ATAAGAATATCAATATACGG+TGG | - | chr5.2:70532132-70532151 | None:intergenic | 25.0% |
| ! | ATATCTTCTTTACTAGAAGT+TGG | - | chr5.2:70529093-70529112 | None:intergenic | 25.0% |
| ! | CCAAAAGCAGATTAATATAT+AGG | - | chr5.2:70531151-70531170 | None:intergenic | 25.0% |
| ! | GCATATATAAATGTCATTAC+AGG | + | chr5.2:70528912-70528931 | MS.gene55175:intron | 25.0% |
| ! | GTCCCTTTATATAATGAAAA+GGG | + | chr5.2:70531910-70531929 | MS.gene55175:intron | 25.0% |
| ! | GTGTTATAGAACTTGATTTA+TGG | + | chr5.2:70529067-70529086 | MS.gene55175:CDS | 25.0% |
| ! | GTTAACCATTAAAAAGATGA+AGG | - | chr5.2:70532025-70532044 | None:intergenic | 25.0% |
| ! | TACTTGAAACAGTTGTAAAA+TGG | - | chr5.2:70531508-70531527 | None:intergenic | 25.0% |
| ! | TATAGAACTGTTTCCAAATA+AGG | - | chr5.2:70532252-70532271 | None:intergenic | 25.0% |
| ! | TCTCTCTATCACAATTAAAA+AGG | + | chr5.2:70530321-70530340 | MS.gene55175:intron | 25.0% |
| ! | TGAAATCATTTGACAAAGAT+TGG | - | chr5.2:70528810-70528829 | None:intergenic | 25.0% |
| ! | TTGAAAATGTTGTTAGAAAG+TGG | + | chr5.2:70530366-70530385 | MS.gene55175:intron | 25.0% |
| !! | ATATTAAAGTTGATCATGGA+TGG | + | chr5.2:70529109-70529128 | MS.gene55175:CDS | 25.0% |
| !! | CACCCTTTTCATTATATAAA+GGG | - | chr5.2:70531915-70531934 | None:intergenic | 25.0% |
| !! | CCTATATATTAATCTGCTTT+TGG | + | chr5.2:70531148-70531167 | MS.gene55175:intron | 25.0% |
| !! | GAAGATATTAAAGTTGATCA+TGG | + | chr5.2:70529105-70529124 | MS.gene55175:CDS | 25.0% |
| !! | GTTATTATGCTTTTGTAATC+CGG | - | chr5.2:70529892-70529911 | None:intergenic | 25.0% |
| !! | GTTCTTTATCAAAAAGTACA+AGG | + | chr5.2:70528383-70528402 | MS.gene55175:CDS | 25.0% |
| !! | TCACCCTTTTCATTATATAA+AGG | - | chr5.2:70531916-70531935 | None:intergenic | 25.0% |
| !! | TTGGTCCAAACAAATATTTT+TGG | + | chr5.2:70531167-70531186 | MS.gene55175:intron | 25.0% |
| !! | TTTTATGCTATTCATCTTGT+GGG | + | chr5.2:70532157-70532176 | MS.gene55175:intron | 25.0% |
| !!! | CAAAAGTAATAATGGACAAT+TGG | + | chr5.2:70531731-70531750 | MS.gene55175:CDS | 25.0% |
| !!! | TACCCTTAAGTTTCTTATTT+TGG | - | chr5.2:70529918-70529937 | None:intergenic | 25.0% |
| !!! | TATATTTTTTTGTGTGAACC+TGG | - | chr5.2:70530133-70530152 | None:intergenic | 25.0% |
| AAACATTTGATAGGTGATAC+AGG | - | chr5.2:70529242-70529261 | None:intergenic | 30.0% | |
| AATCTGTAAAGTTGCTAATG+AGG | + | chr5.2:70531944-70531963 | MS.gene55175:intron | 30.0% | |
| ACTCATAAAAAATCTCCTTG+AGG | - | chr5.2:70528434-70528453 | None:intergenic | 30.0% | |
| AGTTTGACCTAGTAACTTTA+TGG | - | chr5.2:70531547-70531566 | None:intergenic | 30.0% | |
| ATAGACTCCAAACATTTGAT+AGG | - | chr5.2:70529251-70529270 | None:intergenic | 30.0% | |
| ATCATCAGAAGAAGAATCAT+CGG | + | chr5.2:70529643-70529662 | MS.gene55175:CDS | 30.0% | |
| ATGTTGATCAAAGTAGAGAA+AGG | + | chr5.2:70528601-70528620 | MS.gene55175:CDS | 30.0% | |
| ATTCAAACTGTTATTCTTCC+AGG | + | chr5.2:70530112-70530131 | MS.gene55175:intron | 30.0% | |
| CATGGAAATGGAATAATAGT+GGG | + | chr5.2:70530399-70530418 | MS.gene55175:intron | 30.0% | |
| CCAATTTCAGAGATAAAACT+TGG | + | chr5.2:70531877-70531896 | MS.gene55175:intron | 30.0% | |
| GTAAAAATTTACATGGGACA+TGG | + | chr5.2:70531046-70531065 | MS.gene55175:CDS | 30.0% | |
| GTTAAACTTAAACATTCTGC+TGG | - | chr5.2:70529497-70529516 | None:intergenic | 30.0% | |
| GTTTGAATCAGATAAACCAT+AGG | - | chr5.2:70530100-70530119 | None:intergenic | 30.0% | |
| TACGAATTTCACTCATAACA+AGG | + | chr5.2:70531405-70531424 | MS.gene55175:intron | 30.0% | |
| TCATGGAAATGGAATAATAG+TGG | + | chr5.2:70530398-70530417 | MS.gene55175:intron | 30.0% | |
| TCTTCTATAGTTATGATCAC+AGG | - | chr5.2:70529305-70529324 | None:intergenic | 30.0% | |
| TCTTGTGATCATTGATATTG+TGG | + | chr5.2:70531289-70531308 | MS.gene55175:intron | 30.0% | |
| TGAAGTGGAGATTAATAGTA+CGG | + | chr5.2:70529691-70529710 | MS.gene55175:CDS | 30.0% | |
| TGTATCACCTATCAAATGTT+TGG | + | chr5.2:70529241-70529260 | MS.gene55175:CDS | 30.0% | |
| TGTTGCACAAGAATTATGAA+GGG | - | chr5.2:70531223-70531242 | None:intergenic | 30.0% | |
| TTGGACTTAAAACGTTCTTT+CGG | - | chr5.2:70529575-70529594 | None:intergenic | 30.0% | |
| TTGGAGTCTATCAAGAAATA+TGG | + | chr5.2:70529260-70529279 | MS.gene55175:CDS | 30.0% | |
| TTGTTGCACAAGAATTATGA+AGG | - | chr5.2:70531224-70531243 | None:intergenic | 30.0% | |
| TTTAACAGAATTTCCTTCAC+CGG | + | chr5.2:70529511-70529530 | MS.gene55175:CDS | 30.0% | |
| TTTATGCTATTCATCTTGTG+GGG | + | chr5.2:70532158-70532177 | MS.gene55175:intron | 30.0% | |
| ! | AAGTTAATCCACTTGTCTTT+TGG | - | chr5.2:70530704-70530723 | None:intergenic | 30.0% |
| ! | CTTTTATGCTATTCATCTTG+TGG | + | chr5.2:70532156-70532175 | MS.gene55175:intron | 30.0% |
| !! | ACCTTTAATGTCTTTTTCAC+TGG | - | chr5.2:70530937-70530956 | None:intergenic | 30.0% |
| !! | ACTCGATTTTTCAATGATTC+CGG | - | chr5.2:70529533-70529552 | None:intergenic | 30.0% |
| !! | ATTATTTCAAGAGTGTTCAC+CGG | + | chr5.2:70529870-70529889 | MS.gene55175:CDS | 30.0% |
| !!! | CCAAGTTTTATCTCTGAAAT+TGG | - | chr5.2:70531880-70531899 | None:intergenic | 30.0% |
| !!! | GAGATTTTTTATGAGTTTGC+CGG | + | chr5.2:70528438-70528457 | MS.gene55175:CDS | 30.0% |
| AAAACCGGAAGATATCATCA+AGG | - | chr5.2:70528635-70528654 | None:intergenic | 35.0% | |
| AAACCGGAAGATATCATCAA+GGG | - | chr5.2:70528634-70528653 | None:intergenic | 35.0% | |
| AAATTTACATGGGACATGGT+TGG | + | chr5.2:70531050-70531069 | MS.gene55175:CDS | 35.0% | |
| AAGAAACCGATGTAATTGCT+CGG | - | chr5.2:70528484-70528503 | None:intergenic | 35.0% | |
| AAGATGTGGCTTGAAATTTG+TGG | - | chr5.2:70530190-70530209 | None:intergenic | 35.0% | |
| AATCATCTAGGAGCAAAAAC+CGG | - | chr5.2:70528650-70528669 | None:intergenic | 35.0% | |
| ACAAATTTCAAGCCACATCT+TGG | + | chr5.2:70530189-70530208 | MS.gene55175:CDS | 35.0% | |
| AGAGAACATATCAAAGTGTG+TGG | - | chr5.2:70531092-70531111 | None:intergenic | 35.0% | |
| ATAAACCATAGGACACTGTT+AGG | - | chr5.2:70530089-70530108 | None:intergenic | 35.0% | |
| CAAGTAAGAGACAAAGATCA+AGG | + | chr5.2:70531820-70531839 | MS.gene55175:intron | 35.0% | |
| CAGATGGCAACTCAAATATT+TGG | + | chr5.2:70529449-70529468 | MS.gene55175:intron | 35.0% | |
| CAGTGAAGAACCAATCATAA+AGG | + | chr5.2:70529026-70529045 | MS.gene55175:CDS | 35.0% | |
| CTTCGTACCATAAAGTTACT+AGG | + | chr5.2:70531537-70531556 | MS.gene55175:intron | 35.0% | |
| GAGAACATATCAAAGTGTGT+GGG | - | chr5.2:70531091-70531110 | None:intergenic | 35.0% | |
| GCCAGTGAAAAAGACATTAA+AGG | + | chr5.2:70530933-70530952 | MS.gene55175:CDS | 35.0% | |
| GCTTTCTTGTTAGCAAAGTA+AGG | - | chr5.2:70528894-70528913 | None:intergenic | 35.0% | |
| GGTTTCTGCATTAGAATTTC+AGG | - | chr5.2:70530877-70530896 | None:intergenic | 35.0% | |
| TCAAACTCTTACCACTGAAT+CGG | + | chr5.2:70531560-70531579 | MS.gene55175:intron | 35.0% | |
| TCATCAGAAGAAGAATCATC+GGG | + | chr5.2:70529644-70529663 | MS.gene55175:CDS | 35.0% | |
| TCCACTTCAATTGTAGAATC+TGG | - | chr5.2:70529680-70529699 | None:intergenic | 35.0% | |
| TGCATTCAATATGCAGGTTA+GGG | + | chr5.2:70530236-70530255 | MS.gene55175:intron | 35.0% | |
| TTGCATTCAATATGCAGGTT+AGG | + | chr5.2:70530235-70530254 | MS.gene55175:intron | 35.0% | |
| TTTCCAAATAAGGACGTCAT+AGG | - | chr5.2:70532242-70532261 | None:intergenic | 35.0% | |
| ! | AATTTTTGCTAGCAAGCGAT+TGG | + | chr5.2:70530556-70530575 | MS.gene55175:intron | 35.0% |
| ! | ATAAGATTTTGCAGCTGAGA+AGG | + | chr5.2:70528559-70528578 | MS.gene55175:CDS | 35.0% |
| ! | ATTTGAAGTAAAGCAAGCTC+TGG | - | chr5.2:70531799-70531818 | None:intergenic | 35.0% |
| ! | CGGTGACATACAAATTTTGA+AGG | - | chr5.2:70531354-70531373 | None:intergenic | 35.0% |
| ! | GAAAGTGGTGTTTCTTTTCA+TGG | + | chr5.2:70530381-70530400 | MS.gene55175:intron | 35.0% |
| ! | GGTGTTTCTTTTCATGGAAA+TGG | + | chr5.2:70530387-70530406 | MS.gene55175:intron | 35.0% |
| ! | TAGTTGATTTCCAGTAAGGA+AGG | - | chr5.2:70528995-70529014 | None:intergenic | 35.0% |
| ! | TGCTTAGTTGATTTCCAGTA+AGG | - | chr5.2:70528999-70529018 | None:intergenic | 35.0% |
| ! | TTGATTTTTGTCACTGTCAC+AGG | + | chr5.2:70529204-70529223 | MS.gene55175:intron | 35.0% |
| !! | AAGAACGTTTTAAGTCCAAC+CGG | + | chr5.2:70529576-70529595 | MS.gene55175:CDS | 35.0% |
| !! | AAGGAGCATTGAAATCATCT+AGG | - | chr5.2:70528662-70528681 | None:intergenic | 35.0% |
| !! | ACTACTTTTCTACCTCGATA+GGG | + | chr5.2:70530781-70530800 | MS.gene55175:intron | 35.0% |
| !! | TACTACTTTTCTACCTCGAT+AGG | + | chr5.2:70530780-70530799 | MS.gene55175:intron | 35.0% |
| !! | TTTTTCAATGATTCCGGTGA+AGG | - | chr5.2:70529527-70529546 | None:intergenic | 35.0% |
| !!! | AGATTCTGAAGCCTTTTCTA+AGG | - | chr5.2:70530001-70530020 | None:intergenic | 35.0% |
| !!! | ATTTTTTATGAGTTTGCCGG+AGG | + | chr5.2:70528441-70528460 | MS.gene55175:CDS | 35.0% |
| !!! | GATTAGTTTTTACGACAGGT+TGG | + | chr5.2:70531670-70531689 | MS.gene55175:intron | 35.0% |
| !!! | GTTGGATTAGTTTTTACGAC+AGG | + | chr5.2:70531666-70531685 | MS.gene55175:intron | 35.0% |
| AACATGATGACATGCACACT+AGG | - | chr5.2:70530477-70530496 | None:intergenic | 40.0% | |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | chr5.2:70531115-70531134 | None:intergenic | 40.0% | |
| ACGATGAGTTTGATCCTACA+AGG | + | chr5.2:70530905-70530924 | MS.gene55175:CDS | 40.0% | |
| AGAAGAAGAATCATCGGGAA+AGG | + | chr5.2:70529649-70529668 | MS.gene55175:CDS | 40.0% | |
| AGATTAGGGTTTACATGCTG+TGG | + | chr5.2:70531263-70531282 | MS.gene55175:intron | 40.0% | |
| AGTTTGCAACACAACTGTTG+CGG | - | chr5.2:70531374-70531393 | None:intergenic | 40.0% | |
| ATATACTTAGGGTGTACCCT+AGG | + | chr5.2:70530148-70530167 | MS.gene55175:CDS | 40.0% | |
| ATTTCAAGCCACATCTTGGT+TGG | + | chr5.2:70530193-70530212 | MS.gene55175:CDS | 40.0% | |
| CAAGCGATTGGTGAATAATG+TGG | + | chr5.2:70530568-70530587 | MS.gene55175:intron | 40.0% | |
| CAAGGAATGTTCAGAGCAAA+TGG | + | chr5.2:70530829-70530848 | MS.gene55175:CDS | 40.0% | |
| CGAAAACATCGAAAGCAAGT+TGG | - | chr5.2:70530270-70530289 | None:intergenic | 40.0% | |
| CGAGGAGAATTTCACGTTAT+TGG | + | chr5.2:70528518-70528537 | MS.gene55175:CDS | 40.0% | |
| CTCATGGAACAGACATCATT+AGG | + | chr5.2:70530019-70530038 | MS.gene55175:CDS | 40.0% | |
| CTGACCTTTGTGTAAAAGTC+TGG | - | chr5.2:70531118-70531137 | None:intergenic | 40.0% | |
| GAAAAGGCTTCAGAATCTCA+TGG | + | chr5.2:70530003-70530022 | MS.gene55175:CDS | 40.0% | |
| GACTTAAAACGTTCTTTCGG+AGG | - | chr5.2:70529572-70529591 | None:intergenic | 40.0% | |
| GAGCGAAACAACCTTAGAAA+AGG | + | chr5.2:70529987-70530006 | MS.gene55175:CDS | 40.0% | |
| GATGGTTGCATTCAATATGC+AGG | + | chr5.2:70530230-70530249 | MS.gene55175:CDS | 40.0% | |
| GCCAGATTCTACAATTGAAG+TGG | + | chr5.2:70529676-70529695 | MS.gene55175:CDS | 40.0% | |
| GTAAGAGACAAAGATCAAGG+AGG | + | chr5.2:70531823-70531842 | MS.gene55175:intron | 40.0% | |
| GTGGGGTAAATTATTCTCTC+AGG | + | chr5.2:70532175-70532194 | MS.gene55175:intron | 40.0% | |
| TAGTACCTAACAGTGTCCTA+TGG | + | chr5.2:70530081-70530100 | MS.gene55175:intron | 40.0% | |
| TATACTTAGGGTGTACCCTA+GGG | + | chr5.2:70530149-70530168 | MS.gene55175:CDS | 40.0% | |
| TCAAACTCATCGTCACATTG+AGG | - | chr5.2:70530898-70530917 | None:intergenic | 40.0% | |
| TCAAACTCTTCATTCCACAC+AGG | - | chr5.2:70531760-70531779 | None:intergenic | 40.0% | |
| TGTCAACCGAGCAATTACAT+CGG | + | chr5.2:70528475-70528494 | MS.gene55175:CDS | 40.0% | |
| TTCACTGGCATAATCCTTGT+AGG | - | chr5.2:70530922-70530941 | None:intergenic | 40.0% | |
| TTCTCTCAGGACCATGAAAT+TGG | + | chr5.2:70532188-70532207 | MS.gene55175:intron | 40.0% | |
| ! | AATGGAAGTGATAGCGATGA+GGG | + | chr5.2:70529817-70529836 | MS.gene55175:CDS | 40.0% |
| ! | CGTTTTACCTCGGTTTTCAA+AGG | - | chr5.2:70528681-70528700 | None:intergenic | 40.0% |
| ! | CTTAAACATTCTGCTGGTTG+AGG | - | chr5.2:70529491-70529510 | None:intergenic | 40.0% |
| ! | GTAGTGACTACGTTTTACCT+CGG | - | chr5.2:70528691-70528710 | None:intergenic | 40.0% |
| ! | TCCACCAGACTTTTACACAA+AGG | + | chr5.2:70531111-70531130 | MS.gene55175:CDS | 40.0% |
| ! | TCGTTTTATCTTGTCGCAGA+TGG | + | chr5.2:70529433-70529452 | MS.gene55175:intron | 40.0% |
| !! | ATACGGTGGAGTGTTTCTTT+TGG | - | chr5.2:70532118-70532137 | None:intergenic | 40.0% |
| !! | CTACTTTTCTACCTCGATAG+GGG | + | chr5.2:70530782-70530801 | MS.gene55175:intron | 40.0% |
| !! | CTTTCAGCTGTTTTCTGATG+TGG | + | chr5.2:70530446-70530465 | MS.gene55175:intron | 40.0% |
| !! | GCAATTACATCGGTTTCTTG+TGG | + | chr5.2:70528485-70528504 | MS.gene55175:CDS | 40.0% |
| !! | TTACGACAGGTTGGTATTGT+TGG | + | chr5.2:70531679-70531698 | MS.gene55175:intron | 40.0% |
| !! | TTTTAAGTCCAACCGGATCA+AGG | + | chr5.2:70529583-70529602 | MS.gene55175:CDS | 40.0% |
| AAAATCTCCTTGAGGTCCTC+AGG | - | chr5.2:70528426-70528445 | None:intergenic | 45.0% | |
| AAAGTACAAGGTGACTGAGC+TGG | + | chr5.2:70528395-70528414 | MS.gene55175:CDS | 45.0% | |
| ACAGCTGAAAGATCTGACTC+AGG | - | chr5.2:70530437-70530456 | None:intergenic | 45.0% | |
| CAGTCGCAATGCAATTGCAA+AGG | + | chr5.2:70531328-70531347 | MS.gene55175:intron | 45.0% | |
| CAGTGCTTCCAAAAGACAAG+TGG | + | chr5.2:70530693-70530712 | MS.gene55175:intron | 45.0% | |
| CCAAATAAGGACGTCATAGG+AGG | - | chr5.2:70532239-70532258 | None:intergenic | 45.0% | |
| CCACATCTTGGTTGGATGTA+TGG | + | chr5.2:70530201-70530220 | MS.gene55175:CDS | 45.0% | |
| CCATACATCCAACCAAGATG+TGG | - | chr5.2:70530204-70530223 | None:intergenic | 45.0% | |
| CCTCCTATGACGTCCTTATT+TGG | + | chr5.2:70532236-70532255 | MS.gene55175:CDS | 45.0% | |
| GGAATGTTCAGAGCAAATGG+AGG | + | chr5.2:70530832-70530851 | MS.gene55175:CDS | 45.0% | |
| GGACACAATTCCTTCCTTAC+TGG | + | chr5.2:70528982-70529001 | MS.gene55175:CDS | 45.0% | |
| GGAGGAAAAGATGACTTTGC+TGG | + | chr5.2:70531841-70531860 | MS.gene55175:intron | 45.0% | |
| GTGAACTTAGACGCCTAAGT+TGG | + | chr5.2:70529965-70529984 | MS.gene55175:CDS | 45.0% | |
| TGACATGTATGATCCTCCTC+CGG | - | chr5.2:70528460-70528479 | None:intergenic | 45.0% | |
| TGTTGCAGCGCCTTTATGAT+TGG | - | chr5.2:70529039-70529058 | None:intergenic | 45.0% | |
| TTCAGAGCAAATGGAGGATG+TGG | + | chr5.2:70530838-70530857 | MS.gene55175:CDS | 45.0% | |
| TTCTTCCTTGCAATGTCAGC+AGG | - | chr5.2:70531709-70531728 | None:intergenic | 45.0% | |
| TTGGATGTATGGAGCTCAGA+TGG | + | chr5.2:70530212-70530231 | MS.gene55175:CDS | 45.0% | |
| TTTCTACCTCGATAGGGGTT+AGG | + | chr5.2:70530787-70530806 | MS.gene55175:intron | 45.0% | |
| ! | AGATCACTCTGGTTGATGCA+AGG | + | chr5.2:70530811-70530830 | MS.gene55175:CDS | 45.0% |
| ! | AGGTTGTTTCGCTCCAACTT+AGG | - | chr5.2:70529981-70530000 | None:intergenic | 45.0% |
| ! | CAATGCTCCTTTGAAAACCG+AGG | + | chr5.2:70528671-70528690 | MS.gene55175:CDS | 45.0% |
| ! | GAATGGAAGTGATAGCGATG+AGG | + | chr5.2:70529816-70529835 | MS.gene55175:intron | 45.0% |
| ! | GGCAACTATCATGCTCTAGA+TGG | + | chr5.2:70529611-70529630 | MS.gene55175:CDS | 45.0% |
| ! | TCGCCCTTGATGATATCTTC+CGG | + | chr5.2:70528628-70528647 | MS.gene55175:CDS | 45.0% |
| ! | TGGACAATTGGTTTCCTGTG+TGG | + | chr5.2:70531743-70531762 | MS.gene55175:CDS | 45.0% |
| ! | TTTTATGAGTTTGCCGGAGG+AGG | + | chr5.2:70528444-70528463 | MS.gene55175:CDS | 45.0% |
| !! | ATCATAAAGGCGCTGCAACA+AGG | + | chr5.2:70529039-70529058 | MS.gene55175:CDS | 45.0% |
| !! | CAAGCTCTGGAACAGTCAAA+GGG | - | chr5.2:70531786-70531805 | None:intergenic | 45.0% |
| ACCACTGAATCGGCACATCA+TGG | + | chr5.2:70531570-70531589 | MS.gene55175:intron | 50.0% | |
| AGTTGCCGTTGTCCTTGATC+CGG | - | chr5.2:70529598-70529617 | None:intergenic | 50.0% | |
| ATTTGACACGTGTCGCCCTA+GGG | - | chr5.2:70530167-70530186 | None:intergenic | 50.0% | |
| GCAGCTGAGAAGGATACATC+AGG | + | chr5.2:70528569-70528588 | MS.gene55175:CDS | 50.0% | |
| GTATGCCTGCTGACATTGCA+AGG | + | chr5.2:70531701-70531720 | MS.gene55175:CDS | 50.0% | |
| TCCAACCGGATCAAGGACAA+CGG | + | chr5.2:70529590-70529609 | MS.gene55175:CDS | 50.0% | |
| ! | CGGTTTCTTGTGGAGCATCA+AGG | + | chr5.2:70528495-70528514 | MS.gene55175:CDS | 50.0% |
| !! | GCAAGCTCTGGAACAGTCAA+AGG | - | chr5.2:70531787-70531806 | None:intergenic | 50.0% |
| !! | TCCATGATGTGCCGATTCAG+TGG | - | chr5.2:70531574-70531593 | None:intergenic | 50.0% |
| AGGGGTTAGGCAGATCACTC+TGG | + | chr5.2:70530800-70530819 | MS.gene55175:intron | 55.0% | |
| ATCTCCTTGAGGTCCTCAGG+TGG | - | chr5.2:70528423-70528442 | None:intergenic | 55.0% | |
| GATCTGCCTAACCCCTATCG+AGG | - | chr5.2:70530796-70530815 | None:intergenic | 55.0% | |
| GATTTGACACGTGTCGCCCT+AGG | - | chr5.2:70530168-70530187 | None:intergenic | 55.0% | |
| ! | TCTTGTGGAGCATCAAGGCG+AGG | + | chr5.2:70528500-70528519 | MS.gene55175:CDS | 55.0% |
| ! | TGATAGCGATGAGGGAGACG+CGG | + | chr5.2:70529825-70529844 | MS.gene55175:CDS | 55.0% |
| GAGGGAGACGCGGGTTCATA+TGG | + | chr5.2:70529835-70529854 | MS.gene55175:CDS | 60.0% | |
| GATAGCGATGAGGGAGACGC+GGG | + | chr5.2:70529826-70529845 | MS.gene55175:CDS | 60.0% | |
| GCCGTTGTCCTTGATCCGGT+TGG | - | chr5.2:70529594-70529613 | None:intergenic | 60.0% | |
| GGTTCCACCTGAGGACCTCA+AGG | + | chr5.2:70528416-70528435 | MS.gene55175:CDS | 60.0% | |
| ! | GACTGAGCTGGTTCCACCTG+AGG | + | chr5.2:70528407-70528426 | MS.gene55175:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 70528339 | 70532292 | 70528339 | ID=MS.gene55175 |
| chr5.2 | mRNA | 70528339 | 70532292 | 70528339 | ID=MS.gene55175.t1;Parent=MS.gene55175 |
| chr5.2 | exon | 70528339 | 70528692 | 70528339 | ID=MS.gene55175.t1.exon1;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70528339 | 70528692 | 70528339 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70528934 | 70529130 | 70528934 | ID=MS.gene55175.t1.exon2;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70528934 | 70529130 | 70528934 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70529226 | 70529361 | 70529226 | ID=MS.gene55175.t1.exon3;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70529226 | 70529361 | 70529226 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70529452 | 70529712 | 70529452 | ID=MS.gene55175.t1.exon4;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70529452 | 70529712 | 70529452 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70529817 | 70530040 | 70529817 | ID=MS.gene55175.t1.exon5;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70529817 | 70530040 | 70529817 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70530134 | 70530251 | 70530134 | ID=MS.gene55175.t1.exon6;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70530134 | 70530251 | 70530134 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70530802 | 70530954 | 70530802 | ID=MS.gene55175.t1.exon7;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70530802 | 70530954 | 70530802 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70531046 | 70531132 | 70531046 | ID=MS.gene55175.t1.exon8;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70531046 | 70531132 | 70531046 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70531688 | 70531822 | 70531688 | ID=MS.gene55175.t1.exon9;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70531688 | 70531822 | 70531688 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| chr5.2 | exon | 70532197 | 70532292 | 70532197 | ID=MS.gene55175.t1.exon10;Parent=MS.gene55175.t1 |
| chr5.2 | CDS | 70532197 | 70532292 | 70532197 | ID=cds.MS.gene55175.t1;Parent=MS.gene55175.t1 |
| Gene Sequence |
| Protein sequence |
