Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57371.t1 | XP_013456276.1 | 76.2 | 298 | 46 | 3 | 1 | 298 | 23 | 295 | 8.10E-111 | 410.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57371.t1 | Q1PF16 | 41.0 | 156 | 86 | 2 | 149 | 298 | 118 | 273 | 1.4e-23 | 111.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57371.t1 | A0A072UKT5 | 76.2 | 298 | 46 | 3 | 1 | 298 | 23 | 295 | 5.8e-111 | 410.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene57371.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene57371 | -0.806916 | 6.52E-50 | -1.69E-46 |
MS.gene050170 | MS.gene57371 | -0.81288 | 3.39E-51 | -1.69E-46 |
MS.gene050496 | MS.gene57371 | -0.810784 | 9.71E-51 | -1.69E-46 |
MS.gene051651 | MS.gene57371 | 0.801897 | 7.25E-49 | -1.69E-46 |
MS.gene055251 | MS.gene57371 | 0.821054 | 4.95E-53 | -1.69E-46 |
MS.gene055751 | MS.gene57371 | -0.800101 | 1.69E-48 | -1.69E-46 |
MS.gene05589 | MS.gene57371 | -0.817954 | 2.52E-52 | -1.69E-46 |
MS.gene056266 | MS.gene57371 | -0.804785 | 1.83E-49 | -1.69E-46 |
MS.gene056354 | MS.gene57371 | 0.82425 | 8.94E-54 | -1.69E-46 |
MS.gene056504 | MS.gene57371 | -0.810015 | 1.42E-50 | -1.69E-46 |
MS.gene056694 | MS.gene57371 | 0.822955 | 1.80E-53 | -1.69E-46 |
MS.gene058334 | MS.gene57371 | 0.843656 | 1.23E-58 | -1.69E-46 |
MS.gene058382 | MS.gene57371 | 0.816529 | 5.28E-52 | -1.69E-46 |
MS.gene060982 | MS.gene57371 | -0.818217 | 2.20E-52 | -1.69E-46 |
MS.gene061044 | MS.gene57371 | 0.841373 | 4.94E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57371.t1 | MTR_4g067010 | 84.899 | 298 | 20 | 3 | 1 | 298 | 23 | 295 | 0.0 | 507 |
MS.gene57371.t1 | MTR_4g066460 | 83.946 | 299 | 29 | 3 | 1 | 298 | 23 | 303 | 2.82e-174 | 485 |
MS.gene57371.t1 | MTR_4g066380 | 88.255 | 298 | 16 | 3 | 1 | 298 | 22 | 300 | 1.40e-172 | 481 |
MS.gene57371.t1 | MTR_6g047570 | 65.909 | 308 | 76 | 8 | 1 | 298 | 22 | 310 | 2.73e-130 | 374 |
MS.gene57371.t1 | MTR_0011s0260 | 62.805 | 328 | 77 | 7 | 1 | 298 | 22 | 334 | 3.99e-120 | 349 |
MS.gene57371.t1 | MTR_0011s0210 | 62.500 | 328 | 78 | 7 | 1 | 298 | 22 | 334 | 5.12e-118 | 343 |
MS.gene57371.t1 | MTR_0250s0040 | 57.475 | 301 | 62 | 7 | 2 | 298 | 1 | 239 | 7.45e-104 | 304 |
MS.gene57371.t1 | MTR_0246s0020 | 52.941 | 340 | 109 | 7 | 1 | 298 | 23 | 353 | 1.82e-92 | 279 |
MS.gene57371.t1 | MTR_0246s0020 | 52.941 | 340 | 109 | 7 | 1 | 298 | 23 | 353 | 2.91e-92 | 278 |
MS.gene57371.t1 | MTR_0246s0050 | 46.584 | 322 | 120 | 10 | 1 | 298 | 2 | 295 | 1.54e-73 | 229 |
MS.gene57371.t1 | MTR_4g098035 | 46.584 | 322 | 120 | 10 | 1 | 298 | 23 | 316 | 2.50e-73 | 229 |
MS.gene57371.t1 | MTR_6g047550 | 56.652 | 233 | 63 | 6 | 1 | 213 | 22 | 236 | 2.39e-71 | 221 |
MS.gene57371.t1 | MTR_5g014520 | 46.392 | 291 | 113 | 11 | 24 | 298 | 45 | 308 | 2.05e-56 | 185 |
MS.gene57371.t1 | MTR_5g014560 | 47.343 | 207 | 88 | 6 | 100 | 298 | 89 | 282 | 3.87e-45 | 155 |
MS.gene57371.t1 | MTR_4g097920 | 38.272 | 243 | 125 | 6 | 76 | 298 | 52 | 289 | 2.81e-40 | 142 |
MS.gene57371.t1 | MTR_4g097940 | 38.683 | 243 | 124 | 6 | 76 | 298 | 67 | 304 | 2.82e-40 | 143 |
MS.gene57371.t1 | MTR_4g097920 | 38.272 | 243 | 125 | 6 | 76 | 298 | 67 | 304 | 4.00e-40 | 142 |
MS.gene57371.t1 | MTR_2g104490 | 39.556 | 225 | 123 | 6 | 79 | 298 | 70 | 286 | 2.31e-37 | 135 |
MS.gene57371.t1 | MTR_2g104490 | 39.556 | 225 | 123 | 6 | 79 | 298 | 70 | 286 | 3.22e-37 | 134 |
MS.gene57371.t1 | MTR_5g014600 | 41.117 | 197 | 93 | 3 | 124 | 298 | 118 | 313 | 3.52e-37 | 135 |
MS.gene57371.t1 | MTR_2g010450 | 43.548 | 186 | 94 | 3 | 117 | 298 | 151 | 329 | 5.41e-37 | 135 |
MS.gene57371.t1 | MTR_2g104550 | 39.352 | 216 | 119 | 4 | 88 | 298 | 82 | 290 | 6.21e-37 | 134 |
MS.gene57371.t1 | MTR_8g009020 | 39.462 | 223 | 113 | 5 | 88 | 298 | 89 | 301 | 1.71e-36 | 133 |
MS.gene57371.t1 | MTR_5g014640 | 36.585 | 246 | 133 | 4 | 66 | 298 | 67 | 302 | 3.21e-36 | 132 |
MS.gene57371.t1 | MTR_4g097950 | 49.080 | 163 | 71 | 4 | 147 | 298 | 67 | 228 | 1.18e-35 | 129 |
MS.gene57371.t1 | MTR_4g092700 | 41.304 | 184 | 93 | 3 | 124 | 298 | 132 | 309 | 4.82e-35 | 129 |
MS.gene57371.t1 | MTR_4g009540 | 42.941 | 170 | 82 | 5 | 142 | 298 | 142 | 309 | 8.34e-35 | 128 |
MS.gene57371.t1 | MTR_8g069740 | 41.954 | 174 | 92 | 4 | 133 | 298 | 93 | 265 | 1.66e-34 | 126 |
MS.gene57371.t1 | MTR_4g009540 | 42.941 | 170 | 82 | 5 | 142 | 298 | 142 | 309 | 2.00e-34 | 127 |
MS.gene57371.t1 | MTR_4g009110 | 39.785 | 186 | 102 | 3 | 121 | 298 | 145 | 328 | 2.27e-34 | 128 |
MS.gene57371.t1 | MTR_7g080780 | 38.421 | 190 | 108 | 3 | 109 | 298 | 114 | 294 | 1.02e-30 | 117 |
MS.gene57371.t1 | MTR_7g080780 | 38.421 | 190 | 108 | 3 | 109 | 298 | 127 | 307 | 1.36e-30 | 117 |
MS.gene57371.t1 | MTR_2g104650 | 44.048 | 168 | 85 | 4 | 139 | 298 | 81 | 247 | 4.91e-29 | 112 |
MS.gene57371.t1 | MTR_2g104560 | 39.766 | 171 | 84 | 6 | 139 | 298 | 41 | 203 | 5.32e-29 | 110 |
MS.gene57371.t1 | MTR_8g009010 | 36.449 | 214 | 93 | 4 | 88 | 298 | 77 | 250 | 5.07e-28 | 110 |
MS.gene57371.t1 | MTR_2g104530 | 33.871 | 186 | 108 | 4 | 117 | 298 | 78 | 252 | 2.44e-23 | 97.1 |
MS.gene57371.t1 | MTR_5g014550 | 47.619 | 126 | 55 | 3 | 180 | 298 | 54 | 175 | 2.53e-23 | 95.1 |
MS.gene57371.t1 | MTR_2g104590 | 36.747 | 166 | 78 | 5 | 139 | 298 | 58 | 202 | 1.13e-21 | 91.7 |
MS.gene57371.t1 | MTR_2g104500 | 30.417 | 240 | 128 | 8 | 78 | 298 | 31 | 250 | 1.70e-21 | 92.0 |
MS.gene57371.t1 | MTR_8g024790 | 31.481 | 162 | 103 | 3 | 122 | 276 | 263 | 423 | 1.56e-17 | 82.8 |
MS.gene57371.t1 | MTR_8g067280 | 31.138 | 167 | 91 | 2 | 141 | 283 | 443 | 609 | 4.17e-17 | 82.0 |
MS.gene57371.t1 | MTR_1g072320 | 31.250 | 144 | 84 | 2 | 150 | 280 | 470 | 611 | 5.19e-17 | 81.6 |
MS.gene57371.t1 | MTR_5g030430 | 31.138 | 167 | 97 | 3 | 135 | 283 | 474 | 640 | 1.45e-15 | 77.4 |
MS.gene57371.t1 | MTR_4g009510 | 34.000 | 150 | 85 | 5 | 152 | 298 | 45 | 183 | 2.19e-15 | 73.9 |
MS.gene57371.t1 | MTR_3g030700 | 28.191 | 188 | 127 | 2 | 119 | 298 | 165 | 352 | 5.34e-15 | 75.1 |
MS.gene57371.t1 | MTR_7g451650 | 33.835 | 133 | 67 | 2 | 173 | 298 | 57 | 175 | 5.80e-15 | 72.4 |
MS.gene57371.t1 | MTR_7g451650 | 33.835 | 133 | 67 | 2 | 173 | 298 | 57 | 175 | 6.03e-15 | 72.4 |
MS.gene57371.t1 | MTR_8g064700 | 26.596 | 188 | 118 | 5 | 121 | 296 | 219 | 398 | 1.65e-14 | 73.6 |
MS.gene57371.t1 | MTR_8g024770 | 30.263 | 152 | 72 | 5 | 134 | 256 | 246 | 392 | 2.24e-14 | 73.6 |
MS.gene57371.t1 | MTR_4g009420 | 32.667 | 150 | 69 | 4 | 157 | 298 | 50 | 175 | 6.91e-14 | 69.3 |
MS.gene57371.t1 | MTR_7g117670 | 30.323 | 155 | 99 | 2 | 146 | 296 | 394 | 543 | 1.09e-13 | 71.6 |
MS.gene57371.t1 | MTR_4g009420 | 34.328 | 134 | 57 | 3 | 173 | 298 | 65 | 175 | 1.50e-13 | 68.6 |
MS.gene57371.t1 | MTR_7g096350 | 42.529 | 87 | 46 | 1 | 135 | 217 | 336 | 422 | 2.79e-13 | 70.1 |
MS.gene57371.t1 | MTR_3g498695 | 27.485 | 171 | 111 | 2 | 136 | 293 | 284 | 454 | 5.58e-13 | 69.3 |
MS.gene57371.t1 | MTR_3g498695 | 27.485 | 171 | 111 | 2 | 136 | 293 | 284 | 454 | 5.69e-13 | 69.3 |
MS.gene57371.t1 | MTR_8g027495 | 45.000 | 80 | 36 | 2 | 146 | 217 | 450 | 529 | 7.86e-13 | 68.9 |
MS.gene57371.t1 | MTR_7g050350 | 32.283 | 127 | 65 | 2 | 179 | 298 | 1 | 113 | 9.45e-13 | 64.7 |
MS.gene57371.t1 | MTR_7g451650 | 32.283 | 127 | 65 | 2 | 179 | 298 | 1 | 113 | 9.45e-13 | 64.7 |
MS.gene57371.t1 | MTR_3g104100 | 26.452 | 155 | 101 | 2 | 152 | 293 | 197 | 351 | 8.19e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57371.t1 | AT4G37850 | 47.853 | 163 | 75 | 5 | 143 | 298 | 145 | 304 | 2.94e-36 | 132 |
MS.gene57371.t1 | AT4G37850 | 47.853 | 163 | 75 | 5 | 143 | 298 | 145 | 304 | 2.94e-36 | 132 |
MS.gene57371.t1 | AT2G22760 | 40.361 | 166 | 93 | 2 | 139 | 298 | 108 | 273 | 2.69e-33 | 124 |
MS.gene57371.t1 | AT2G22760 | 40.361 | 166 | 93 | 2 | 139 | 298 | 108 | 273 | 5.04e-33 | 123 |
MS.gene57371.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 111 | 281 | 3.95e-31 | 118 |
MS.gene57371.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 139 | 309 | 4.17e-31 | 119 |
MS.gene57371.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 111 | 281 | 4.57e-31 | 118 |
MS.gene57371.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 139 | 309 | 4.75e-31 | 119 |
MS.gene57371.t1 | AT2G22750 | 45.349 | 172 | 84 | 4 | 136 | 298 | 135 | 305 | 4.95e-31 | 119 |
MS.gene57371.t1 | AT2G22770 | 37.500 | 168 | 87 | 1 | 149 | 298 | 131 | 298 | 1.26e-27 | 109 |
MS.gene57371.t1 | AT4G17880 | 32.558 | 215 | 109 | 5 | 93 | 283 | 350 | 552 | 2.08e-20 | 91.7 |
MS.gene57371.t1 | AT5G46760 | 35.542 | 166 | 85 | 6 | 135 | 280 | 396 | 559 | 1.41e-19 | 89.4 |
MS.gene57371.t1 | AT1G32640 | 32.099 | 162 | 94 | 4 | 134 | 283 | 432 | 589 | 2.50e-17 | 82.4 |
MS.gene57371.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene57371.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene57371.t1 | AT1G01260 | 29.775 | 178 | 111 | 3 | 74 | 241 | 351 | 524 | 8.20e-15 | 75.1 |
MS.gene57371.t1 | AT2G46510 | 47.297 | 74 | 29 | 1 | 142 | 205 | 377 | 450 | 1.26e-14 | 74.3 |
MS.gene57371.t1 | AT4G16430 | 39.216 | 102 | 58 | 1 | 135 | 232 | 301 | 402 | 2.90e-14 | 73.2 |
MS.gene57371.t1 | AT4G09820 | 30.769 | 130 | 73 | 1 | 139 | 268 | 352 | 464 | 3.17e-13 | 70.1 |
MS.gene57371.t1 | AT5G46830 | 41.667 | 96 | 42 | 2 | 146 | 227 | 335 | 430 | 8.28e-13 | 68.9 |
MS.gene57371.t1 | AT4G00870 | 34.188 | 117 | 65 | 2 | 151 | 258 | 250 | 363 | 1.30e-12 | 68.2 |
MS.gene57371.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 441 | 611 | 1.17e-11 | 65.5 |
MS.gene57371.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 446 | 616 | 1.26e-11 | 65.5 |
MS.gene57371.t1 | AT5G41315 | 29.310 | 174 | 92 | 6 | 150 | 295 | 449 | 619 | 1.34e-11 | 65.5 |
MS.gene57371.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
MS.gene57371.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
MS.gene57371.t1 | AT1G63650 | 27.811 | 169 | 96 | 6 | 150 | 295 | 405 | 570 | 5.66e-11 | 63.5 |
Find 43 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGTGGAAGCAAGAGTATT+AGG | 0.274085 | 4.4:+39823685 | MS.gene57371:CDS |
TCTTGTTCCTAACCTTAAAA+AGG | 0.274757 | 4.4:+39820268 | MS.gene57371:CDS |
TCAAGAGCACAAGGGGCTTT+TGG | 0.303932 | 4.4:+39823735 | MS.gene57371:CDS |
CATCAGCATCAAGGAAATTC+AGG | 0.324134 | 4.4:-39819794 | None:intergenic |
GATGGTGATGGAGAAATATT+TGG | 0.350142 | 4.4:-39819972 | None:intergenic |
CTGCAAGAGCAATGAAGGTT+TGG | 0.363766 | 4.4:-39820244 | None:intergenic |
ATCAGTGTCTCCAACCGAAT+TGG | 0.364748 | 4.4:+39820079 | MS.gene57371:CDS |
GATAGTGTTGAATGTGTTGT+TGG | 0.376948 | 4.4:+39823652 | MS.gene57371:CDS |
ACTCTTGCTTCCACTTGAAA+TGG | 0.401306 | 4.4:-39823679 | None:intergenic |
ATCGCTGCATAGGCATGGTT+TGG | 0.409003 | 4.4:-39823608 | None:intergenic |
AATAGCAGTGTCTTACCCTT+TGG | 0.414898 | 4.4:+39823802 | MS.gene57371:CDS |
TAGGAAAACAAATGTTGATT+CGG | 0.415655 | 4.4:+39823704 | MS.gene57371:CDS |
TGCAAGAGCAATGAAGGTTT+GGG | 0.438568 | 4.4:-39820243 | None:intergenic |
CACTCAACAGAAACCTCAAA+AGG | 0.444007 | 4.4:+39820113 | MS.gene57371:CDS |
CAAACAACAATGTTTAACTC+TGG | 0.449913 | 4.4:+39819866 | MS.gene57371:CDS |
AAAGAGGAGTTAGATGGTGA+TGG | 0.464747 | 4.4:-39819984 | None:intergenic |
AAACAACAATGTTTAACTCT+GGG | 0.467228 | 4.4:+39819867 | MS.gene57371:CDS |
TGACTTGCTGAGATTATTTG+TGG | 0.472239 | 4.4:-39819898 | None:intergenic |
GCTGAGATTATTTGTGGAAG+TGG | 0.485912 | 4.4:-39819892 | None:intergenic |
AAGAGCTGCAAGAGCAATGA+AGG | 0.494766 | 4.4:-39820249 | None:intergenic |
AACTGAAAAGAGGAGTTAGA+TGG | 0.496291 | 4.4:-39819990 | None:intergenic |
AATTTCCTTGATGCTGATGT+AGG | 0.503309 | 4.4:+39819798 | MS.gene57371:CDS |
GGTAACTACCTGAGCAATGA+TGG | 0.506977 | 4.4:-39823845 | None:intergenic |
AGCAAAAGGCCTCGTGCTCA+TGG | 0.511731 | 4.4:+39820176 | MS.gene57371:CDS |
TTCCTTGATGCTGATGTAGG+AGG | 0.513457 | 4.4:+39819801 | MS.gene57371:CDS |
TGACATTACCATCATTGCTC+AGG | 0.520672 | 4.4:+39823837 | MS.gene57371:CDS |
AGAAACCTCAAAAGGGTCGT+TGG | 0.545529 | 4.4:+39820121 | MS.gene57371:CDS |
TCCTTGATGCTGATGTAGGA+GGG | 0.555978 | 4.4:+39819802 | MS.gene57371:CDS |
GTCAAGTGTAGAATCTCCAA+AGG | 0.576619 | 4.4:-39823818 | None:intergenic |
TCTTCATCGCTGCATAGGCA+TGG | 0.581383 | 4.4:-39823613 | None:intergenic |
AAGAATCTTCATCGCTGCAT+AGG | 0.581886 | 4.4:-39823618 | None:intergenic |
ACCCTCCTACATCAGCATCA+AGG | 0.584158 | 4.4:-39819803 | None:intergenic |
TGGTATTTGAAACTGAAAAG+AGG | 0.585974 | 4.4:-39820000 | None:intergenic |
ACTCAACAGAAACCTCAAAA+GGG | 0.587077 | 4.4:+39820114 | MS.gene57371:CDS |
TACAATGTCAAGAGCACAAG+GGG | 0.594830 | 4.4:+39823728 | MS.gene57371:CDS |
TGTTGGTTCACCATTTCAAG+TGG | 0.611743 | 4.4:+39823669 | MS.gene57371:CDS |
GATACAATGTCAAGAGCACA+AGG | 0.611765 | 4.4:+39823726 | MS.gene57371:CDS |
TCAAGTGTAGAATCTCCAAA+GGG | 0.613125 | 4.4:-39823817 | None:intergenic |
CGAATACAATATATTTGCTG+AGG | 0.615306 | 4.4:+39819764 | MS.gene57371:CDS |
AACAACAATGTTTAACTCTG+GGG | 0.649069 | 4.4:+39819868 | MS.gene57371:CDS |
TCATGGTAGAGATCACATCA+TGG | 0.685356 | 4.4:+39820193 | MS.gene57371:CDS |
TGATCTCTACCATGAGCACG+AGG | 0.691122 | 4.4:-39820185 | None:intergenic |
ATACAATGTCAAGAGCACAA+GGG | 0.744485 | 4.4:+39823727 | MS.gene57371:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATTAAGGAATTAA+TGG | + | chr4.4:39822599-39822618 | MS.gene57371:intron | 10.0% |
!! | AAAAATGATTGTTAATTTAT+TGG | + | chr4.4:39822640-39822659 | MS.gene57371:intron | 10.0% |
!! | AAAATAATTAAGGAATTAAT+GGG | + | chr4.4:39822600-39822619 | MS.gene57371:intron | 10.0% |
!! | AAAATTGATTGTTAATTTAT+TGG | + | chr4.4:39822676-39822695 | MS.gene57371:intron | 10.0% |
!! | ACAAATTAGTAATATTAATT+GGG | + | chr4.4:39821724-39821743 | MS.gene57371:intron | 10.0% |
!! | TATTTGTTTATAAATGTAAT+CGG | - | chr4.4:39821907-39821926 | None:intergenic | 10.0% |
!!! | TTTTTTTAAAATTTCGTTTT+AGG | - | chr4.4:39822855-39822874 | None:intergenic | 10.0% |
!! | AAATTAGTAATATTAATTGG+GGG | + | chr4.4:39821726-39821745 | MS.gene57371:intron | 15.0% |
!! | ATGAAAAAGGTAAAAAAAAT+AGG | + | chr4.4:39822569-39822588 | MS.gene57371:intron | 15.0% |
!! | ATTTGTTTATAAATGTAATC+GGG | - | chr4.4:39821906-39821925 | None:intergenic | 15.0% |
!! | CAAATTAGTAATATTAATTG+GGG | + | chr4.4:39821725-39821744 | MS.gene57371:intron | 15.0% |
!! | GACAAATTAGTAATATTAAT+TGG | + | chr4.4:39821723-39821742 | MS.gene57371:intron | 15.0% |
!! | TGTTGTTCTATAAAATAAAA+TGG | + | chr4.4:39821252-39821271 | MS.gene57371:intron | 15.0% |
!! | TTCTCTTAAATAAAATCAAA+GGG | - | chr4.4:39820911-39820930 | None:intergenic | 15.0% |
!! | TTTCTCTTAAATAAAATCAA+AGG | - | chr4.4:39820912-39820931 | None:intergenic | 15.0% |
!!! | AAATTGTAGAGTATTTTATT+TGG | - | chr4.4:39821451-39821470 | None:intergenic | 15.0% |
!!! | AATTGTAGAGTATTTTATTT+GGG | - | chr4.4:39821450-39821469 | None:intergenic | 15.0% |
!!! | AGTATTTTTATAATAATGAC+CGG | - | chr4.4:39820590-39820609 | None:intergenic | 15.0% |
!!! | ATTTTATGATCTCTAATAAT+TGG | - | chr4.4:39823076-39823095 | None:intergenic | 15.0% |
!!! | ATTTTTTTTTTTTTGACAAG+AGG | - | chr4.4:39820517-39820536 | None:intergenic | 15.0% |
!!! | TATTTTGACCAATATATAAA+GGG | - | chr4.4:39820548-39820567 | None:intergenic | 15.0% |
!!! | TCAATAAAATCACATTTTTA+AGG | - | chr4.4:39822158-39822177 | None:intergenic | 15.0% |
!!! | TTATTTTGACCATATATTAA+CGG | - | chr4.4:39822217-39822236 | None:intergenic | 15.0% |
!! | AAAAGGTAAAAAAAATAGGA+AGG | + | chr4.4:39822573-39822592 | MS.gene57371:intron | 20.0% |
!! | AAATGGAAAATGTTATCTTA+AGG | + | chr4.4:39821269-39821288 | MS.gene57371:intron | 20.0% |
!! | AAATTCTTGATAAAAAGCTT+CGG | + | chr4.4:39821217-39821236 | MS.gene57371:intron | 20.0% |
!! | AACAATTAGAATTATCATGA+GGG | + | chr4.4:39822088-39822107 | MS.gene57371:intron | 20.0% |
!! | AACATATTAATTCTCTTACT+TGG | - | chr4.4:39822768-39822787 | None:intergenic | 20.0% |
!! | AATGGAAAATGTTATCTTAA+GGG | + | chr4.4:39821270-39821289 | MS.gene57371:intron | 20.0% |
!! | ACATATTAATTCTCTTACTT+GGG | - | chr4.4:39822767-39822786 | None:intergenic | 20.0% |
!! | ACATTCTTATCTTTCTATAA+AGG | + | chr4.4:39820821-39820840 | MS.gene57371:intron | 20.0% |
!! | AGTAAGAGAATTAATATGTT+TGG | + | chr4.4:39822768-39822787 | MS.gene57371:intron | 20.0% |
!! | ATTCAATTAACCTAAAAAGT+TGG | - | chr4.4:39821930-39821949 | None:intergenic | 20.0% |
!! | GGACAAAAATAAAATCAAAT+GGG | + | chr4.4:39821808-39821827 | MS.gene57371:intron | 20.0% |
!! | TAACATTTCCCTTTATATAT+TGG | + | chr4.4:39820537-39820556 | MS.gene57371:intron | 20.0% |
!! | TACTCATATTTAATTAGTGT+CGG | - | chr4.4:39822923-39822942 | None:intergenic | 20.0% |
!! | TTAGAGATAAAGATAAATCT+TGG | + | chr4.4:39823422-39823441 | MS.gene57371:intron | 20.0% |
!! | TTTAATACACATACAAACAA+AGG | - | chr4.4:39821683-39821702 | None:intergenic | 20.0% |
!! | TTTGTTTATAAATGTAATCG+GGG | - | chr4.4:39821905-39821924 | None:intergenic | 20.0% |
!!! | AAAGTATACTACTACTTTTA+AGG | - | chr4.4:39821496-39821515 | None:intergenic | 20.0% |
!!! | CACTTTAGTTCAAAATAAAT+AGG | + | chr4.4:39822120-39822139 | MS.gene57371:intron | 20.0% |
!!! | CTATTTTGACCAATATATAA+AGG | - | chr4.4:39820549-39820568 | None:intergenic | 20.0% |
!!! | TAAACAAATACCAACTTTTT+AGG | + | chr4.4:39821917-39821936 | MS.gene57371:intron | 20.0% |
!!! | TAATTGATGATTTTAAGAGT+TGG | - | chr4.4:39820324-39820343 | None:intergenic | 20.0% |
!!! | TTAACTTTTCCGTTAATATA+TGG | + | chr4.4:39822205-39822224 | MS.gene57371:intron | 20.0% |
!!! | TTGATTTTGTTTATTTGCAA+CGG | + | chr4.4:39822174-39822193 | MS.gene57371:intron | 20.0% |
! | AAACAACAATGTTTAACTCT+GGG | + | chr4.4:39819867-39819886 | MS.gene57371:CDS | 25.0% |
! | AAGAAATGTGAAAAATGCAA+AGG | - | chr4.4:39821601-39821620 | None:intergenic | 25.0% |
! | AATAAGAAGTGAGAAAAACA+AGG | + | chr4.4:39821041-39821060 | MS.gene57371:intron | 25.0% |
! | AATTCTTGATAAAAAGCTTC+GGG | + | chr4.4:39821218-39821237 | MS.gene57371:intron | 25.0% |
! | ACAAGTTAAGGATCTATAAA+AGG | - | chr4.4:39821402-39821421 | None:intergenic | 25.0% |
! | AGAAATGTGAAAAATGCAAA+GGG | - | chr4.4:39821600-39821619 | None:intergenic | 25.0% |
! | AGTTATATAAATAGTGCACA+TGG | + | chr4.4:39822236-39822255 | MS.gene57371:intron | 25.0% |
! | ATGATTCAATCACAAATGTA+AGG | - | chr4.4:39822738-39822757 | None:intergenic | 25.0% |
! | ATGCATCTAGTAATTTGAAA+AGG | + | chr4.4:39821772-39821791 | MS.gene57371:intron | 25.0% |
! | CAAAAAAATGAAGCCTAATA+CGG | + | chr4.4:39823268-39823287 | MS.gene57371:intron | 25.0% |
! | CAAAAATAAAATCAAATGGG+TGG | + | chr4.4:39821811-39821830 | MS.gene57371:intron | 25.0% |
! | CAACAATTAGAATTATCATG+AGG | + | chr4.4:39822087-39822106 | MS.gene57371:intron | 25.0% |
! | CTCATGATAATTCTAATTGT+TGG | - | chr4.4:39822089-39822108 | None:intergenic | 25.0% |
! | GGAAGGAGAAAAAATAATTA+AGG | + | chr4.4:39822590-39822609 | MS.gene57371:intron | 25.0% |
! | GGGACAAAAATAAAATCAAA+TGG | + | chr4.4:39821807-39821826 | MS.gene57371:intron | 25.0% |
! | TAAAACAATGCTACATAGTA+GGG | - | chr4.4:39823352-39823371 | None:intergenic | 25.0% |
! | TGATTCAATCACAAATGTAA+GGG | - | chr4.4:39822737-39822756 | None:intergenic | 25.0% |
! | TGCATCTAGTAATTTGAAAA+GGG | + | chr4.4:39821773-39821792 | MS.gene57371:intron | 25.0% |
! | TTAATACAGCAACAAATTGT+AGG | + | chr4.4:39822057-39822076 | MS.gene57371:intron | 25.0% |
! | TTCTTATTGGTCAAAAACAA+TGG | - | chr4.4:39821029-39821048 | None:intergenic | 25.0% |
! | TTTAGGCCTAAAAATACATT+GGG | - | chr4.4:39822838-39822857 | None:intergenic | 25.0% |
!! | ACTGCTACTTCAAAAAAATA+TGG | + | chr4.4:39821130-39821149 | MS.gene57371:intron | 25.0% |
!! | CTGCTACTTCAAAAAAATAT+GGG | + | chr4.4:39821131-39821150 | MS.gene57371:intron | 25.0% |
!! | GTGATTCATATTTTCCAATT+CGG | - | chr4.4:39820096-39820115 | None:intergenic | 25.0% |
!! | TAATTAAGGAATTAATGGGT+TGG | + | chr4.4:39822604-39822623 | MS.gene57371:intron | 25.0% |
!! | TAGGAAAACAAATGTTGATT+CGG | + | chr4.4:39823704-39823723 | MS.gene57371:CDS | 25.0% |
!! | TTTTAGGCCTAAAAATACAT+TGG | - | chr4.4:39822839-39822858 | None:intergenic | 25.0% |
!! | TTTTTATAATAATGACCGGA+AGG | - | chr4.4:39820586-39820605 | None:intergenic | 25.0% |
!!! | AATCACATTTTTAAGGAATG+TGG | - | chr4.4:39822151-39822170 | None:intergenic | 25.0% |
!!! | GTTTTAATGAATACTTACTC+TGG | - | chr4.4:39822018-39822037 | None:intergenic | 25.0% |
!!! | TAAAGTATCGTACCTTTTTA+AGG | - | chr4.4:39820283-39820302 | None:intergenic | 25.0% |
!!! | TAAGCAAAAGACTACTTTTT+AGG | - | chr4.4:39820709-39820728 | None:intergenic | 25.0% |
!!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr4.4:39821042-39821061 | None:intergenic | 25.0% |
AAAACAATGGAGAGAGAAAA+AGG | - | chr4.4:39821016-39821035 | None:intergenic | 30.0% | |
AAATGTGAAAAATGCAAAGG+GGG | - | chr4.4:39821598-39821617 | None:intergenic | 30.0% | |
AACAACAATGTTTAACTCTG+GGG | + | chr4.4:39819868-39819887 | MS.gene57371:CDS | 30.0% | |
ATCTGTAAAAATCTGCTAGA+TGG | + | chr4.4:39823480-39823499 | MS.gene57371:intron | 30.0% | |
ATGAAATTTCCAGAATGTGT+TGG | + | chr4.4:39820874-39820893 | MS.gene57371:intron | 30.0% | |
CAAAAACCTCAAAAAGCAAA+AGG | + | chr4.4:39820162-39820181 | MS.gene57371:CDS | 30.0% | |
CAAACAACAATGTTTAACTC+TGG | + | chr4.4:39819866-39819885 | MS.gene57371:CDS | 30.0% | |
CATACAAACAAAGGACAATT+TGG | - | chr4.4:39821674-39821693 | None:intergenic | 30.0% | |
CATCTAGTAATTTGAAAAGG+GGG | + | chr4.4:39821775-39821794 | MS.gene57371:intron | 30.0% | |
CTTTCTATAAAGGAAAATGC+TGG | + | chr4.4:39820831-39820850 | MS.gene57371:intron | 30.0% | |
GAAAGAGCTTAAAAATCGTT+TGG | + | chr4.4:39823540-39823559 | MS.gene57371:CDS | 30.0% | |
GAAATGTGAAAAATGCAAAG+GGG | - | chr4.4:39821599-39821618 | None:intergenic | 30.0% | |
GCATCTAGTAATTTGAAAAG+GGG | + | chr4.4:39821774-39821793 | MS.gene57371:intron | 30.0% | |
GCTGTATTAATTACTACAAG+TGG | - | chr4.4:39822047-39822066 | None:intergenic | 30.0% | |
GGTTTAGAAAACAAATACTC+CGG | + | chr4.4:39822697-39822716 | MS.gene57371:intron | 30.0% | |
GTAAAACAATGCTACATAGT+AGG | - | chr4.4:39823353-39823372 | None:intergenic | 30.0% | |
TATAGAATCACTTTCGATTG+AGG | - | chr4.4:39822890-39822909 | None:intergenic | 30.0% | |
TATGAAATGAGTGATGTATG+TGG | - | chr4.4:39820684-39820703 | None:intergenic | 30.0% | |
TCAACAAAGTTGTCATCAAA+TGG | + | chr4.4:39821067-39821086 | MS.gene57371:intron | 30.0% | |
TCTTGTTCCTAACCTTAAAA+AGG | + | chr4.4:39820268-39820287 | MS.gene57371:CDS | 30.0% | |
! | AGTATTTAGTTCCAGTTGAT+AGG | - | chr4.4:39821554-39821573 | None:intergenic | 30.0% |
! | CGAATACAATATATTTGCTG+AGG | + | chr4.4:39819764-39819783 | MS.gene57371:CDS | 30.0% |
! | TATTAATTGGGGGTATGTTT+AGG | + | chr4.4:39821736-39821755 | MS.gene57371:intron | 30.0% |
! | TGGTATTTGAAACTGAAAAG+AGG | - | chr4.4:39820003-39820022 | None:intergenic | 30.0% |
! | TTCATATTTTCCAATTCGGT+TGG | - | chr4.4:39820092-39820111 | None:intergenic | 30.0% |
!! | AAGGGTTTTGATATATACTC+CGG | - | chr4.4:39822719-39822738 | None:intergenic | 30.0% |
!! | ATCCTTAACTTGTATCCTTA+GGG | + | chr4.4:39821409-39821428 | MS.gene57371:intron | 30.0% |
!! | ATTTTGTTTATTTGCAACGG+AGG | + | chr4.4:39822177-39822196 | MS.gene57371:intron | 30.0% |
!! | CTTCTTTTAAAGATGAGTAG+TGG | + | chr4.4:39822525-39822544 | MS.gene57371:intron | 30.0% |
!! | CTTTGACTTGTATTTATGAG+CGG | + | chr4.4:39822294-39822313 | MS.gene57371:intron | 30.0% |
!! | GATTTTAAGAGTTGGCTAAT+AGG | - | chr4.4:39820316-39820335 | None:intergenic | 30.0% |
!! | TTTTGTTTATTTGCAACGGA+GGG | + | chr4.4:39822178-39822197 | MS.gene57371:intron | 30.0% |
!!! | AACCACTTTTTGACAACTTT+TGG | + | chr4.4:39820944-39820963 | MS.gene57371:intron | 30.0% |
!!! | AATTTTTTAGGCTCCGTATT+AGG | - | chr4.4:39823284-39823303 | None:intergenic | 30.0% |
!!! | ATTCTCTTTTGAGTTACTAG+GGG | - | chr4.4:39820051-39820070 | None:intergenic | 30.0% |
!!! | CATTCTCTTTTGAGTTACTA+GGG | - | chr4.4:39820052-39820071 | None:intergenic | 30.0% |
!!! | TATCGTACCTTTTTAAGGTT+AGG | - | chr4.4:39820278-39820297 | None:intergenic | 30.0% |
!!! | TCATTCTCTTTTGAGTTACT+AGG | - | chr4.4:39820053-39820072 | None:intergenic | 30.0% |
AACTGAAAAGAGGAGTTAGA+TGG | - | chr4.4:39819993-39820012 | None:intergenic | 35.0% | |
AATGTGAAAAATGCAAAGGG+GGG | - | chr4.4:39821597-39821616 | None:intergenic | 35.0% | |
AATTTCCTTGATGCTGATGT+AGG | + | chr4.4:39819798-39819817 | MS.gene57371:CDS | 35.0% | |
ACTCAACAGAAACCTCAAAA+GGG | + | chr4.4:39820114-39820133 | MS.gene57371:CDS | 35.0% | |
AGTGCAAGGAGTCATAATAT+AGG | + | chr4.4:39820777-39820796 | MS.gene57371:intron | 35.0% | |
AGTGGTATGTAATTCGATGT+CGG | - | chr4.4:39823193-39823212 | None:intergenic | 35.0% | |
ATAGTGACTAGTAGTGTACA+TGG | + | chr4.4:39820731-39820750 | MS.gene57371:intron | 35.0% | |
CAAATGGGTGGTTACATTAA+GGG | + | chr4.4:39821823-39821842 | MS.gene57371:intron | 35.0% | |
CATCGAAGAAATGATGTATG+TGG | + | chr4.4:39820619-39820638 | MS.gene57371:intron | 35.0% | |
CTTTCGATTGAGGAAACTTA+TGG | - | chr4.4:39822880-39822899 | None:intergenic | 35.0% | |
GACATGTATTTATGAGTGCA+AGG | + | chr4.4:39820763-39820782 | MS.gene57371:intron | 35.0% | |
GATGTATGTGGTCTATTATG+TGG | + | chr4.4:39820631-39820650 | MS.gene57371:intron | 35.0% | |
GATTACATTGATACTCCTTC+CGG | + | chr4.4:39820568-39820587 | MS.gene57371:intron | 35.0% | |
GTCCAAAAGTTGTCAAAAAG+TGG | - | chr4.4:39820949-39820968 | None:intergenic | 35.0% | |
GTCGTTGGAAAAAGAAAACA+TGG | + | chr4.4:39820136-39820155 | MS.gene57371:CDS | 35.0% | |
TACCCTAAGGATACAAGTTA+AGG | - | chr4.4:39821414-39821433 | None:intergenic | 35.0% | |
TCAAATGGGTGGTTACATTA+AGG | + | chr4.4:39821822-39821841 | MS.gene57371:intron | 35.0% | |
TCAAGTGTAGAATCTCCAAA+GGG | - | chr4.4:39823820-39823839 | None:intergenic | 35.0% | |
TGAAAAGGGGGTTACATTTA+GGG | + | chr4.4:39821787-39821806 | MS.gene57371:intron | 35.0% | |
TTGAAAAGGGGGTTACATTT+AGG | + | chr4.4:39821786-39821805 | MS.gene57371:intron | 35.0% | |
TTGACAATTACTCTGTAGCA+GGG | + | chr4.4:39822808-39822827 | MS.gene57371:intron | 35.0% | |
TTTATCAAGAATTTGTCCCG+AGG | - | chr4.4:39821211-39821230 | None:intergenic | 35.0% | |
! | AGCGGATGAAGTACTAATAT+AGG | + | chr4.4:39822312-39822331 | MS.gene57371:intron | 35.0% |
! | ATACAATGTCAAGAGCACAA+GGG | + | chr4.4:39823727-39823746 | MS.gene57371:CDS | 35.0% |
! | CACATTCTGGAAATTTCATG+AGG | - | chr4.4:39820873-39820892 | None:intergenic | 35.0% |
! | GATAGTGTTGAATGTGTTGT+TGG | + | chr4.4:39823652-39823671 | MS.gene57371:CDS | 35.0% |
! | TAATGCTAACTTGTACCCTA+AGG | - | chr4.4:39821427-39821446 | None:intergenic | 35.0% |
!! | GATCCTTAACTTGTATCCTT+AGG | + | chr4.4:39821408-39821427 | MS.gene57371:intron | 35.0% |
!! | GATGGTGATGGAGAAATATT+TGG | - | chr4.4:39819975-39819994 | None:intergenic | 35.0% |
!! | TGACTTGCTGAGATTATTTG+TGG | - | chr4.4:39819901-39819920 | None:intergenic | 35.0% |
!!! | TTCTCTTTTGAGTTACTAGG+GGG | - | chr4.4:39820050-39820069 | None:intergenic | 35.0% |
!!! | TTTAGGCCCTCGAATTTTTT+AGG | - | chr4.4:39823296-39823315 | None:intergenic | 35.0% |
AAAGAGGAGTTAGATGGTGA+TGG | - | chr4.4:39819987-39820006 | None:intergenic | 40.0% | |
AAGAATCTTCATCGCTGCAT+AGG | - | chr4.4:39823621-39823640 | None:intergenic | 40.0% | |
AATAGCAGTGTCTTACCCTT+TGG | + | chr4.4:39823802-39823821 | MS.gene57371:CDS | 40.0% | |
ACGGAGCCTAAAAAATTCGA+GGG | + | chr4.4:39823287-39823306 | MS.gene57371:intron | 40.0% | |
ACTCTTGCTTCCACTTGAAA+TGG | - | chr4.4:39823682-39823701 | None:intergenic | 40.0% | |
AGAATGTTGCCAACACATTC+TGG | - | chr4.4:39820886-39820905 | None:intergenic | 40.0% | |
AGAGAGAAAAAGGAAGAGAG+AGG | - | chr4.4:39821006-39821025 | None:intergenic | 40.0% | |
CACTCAACAGAAACCTCAAA+AGG | + | chr4.4:39820113-39820132 | MS.gene57371:CDS | 40.0% | |
CATCAGCATCAAGGAAATTC+AGG | - | chr4.4:39819797-39819816 | None:intergenic | 40.0% | |
GACATTACCATCATTGCTCA+GGG | + | chr4.4:39823838-39823857 | MS.gene57371:CDS | 40.0% | |
GAGTTTATGAACCCGAAACA+CGG | + | chr4.4:39821525-39821544 | MS.gene57371:intron | 40.0% | |
GCTGAGATTATTTGTGGAAG+TGG | - | chr4.4:39819895-39819914 | None:intergenic | 40.0% | |
GGCCTAAAAATACATTGGGA+CGG | - | chr4.4:39822834-39822853 | None:intergenic | 40.0% | |
GTCAAGTGTAGAATCTCCAA+AGG | - | chr4.4:39823821-39823840 | None:intergenic | 40.0% | |
GTTGACAATTACTCTGTAGC+AGG | + | chr4.4:39822807-39822826 | MS.gene57371:intron | 40.0% | |
TACGGAGCCTAAAAAATTCG+AGG | + | chr4.4:39823286-39823305 | MS.gene57371:intron | 40.0% | |
TCATGGTAGAGATCACATCA+TGG | + | chr4.4:39820193-39820212 | MS.gene57371:CDS | 40.0% | |
TGACATTACCATCATTGCTC+AGG | + | chr4.4:39823837-39823856 | MS.gene57371:CDS | 40.0% | |
TGCAAGAGCAATGAAGGTTT+GGG | - | chr4.4:39820246-39820265 | None:intergenic | 40.0% | |
! | AGTTACTAGGGGGTGAATTT+TGG | - | chr4.4:39820040-39820059 | None:intergenic | 40.0% |
! | GATACAATGTCAAGAGCACA+AGG | + | chr4.4:39823726-39823745 | MS.gene57371:CDS | 40.0% |
! | GTTACTAGGGGGTGAATTTT+GGG | - | chr4.4:39820039-39820058 | None:intergenic | 40.0% |
! | TACAATGTCAAGAGCACAAG+GGG | + | chr4.4:39823728-39823747 | MS.gene57371:CDS | 40.0% |
! | TTACTAGGGGGTGAATTTTG+GGG | - | chr4.4:39820038-39820057 | None:intergenic | 40.0% |
! | TTTTTCCAACGACCCTTTTG+AGG | - | chr4.4:39820129-39820148 | None:intergenic | 40.0% |
!! | CAAGTGGAAGCAAGAGTATT+AGG | + | chr4.4:39823685-39823704 | MS.gene57371:CDS | 40.0% |
!! | TGTTGGTTCACCATTTCAAG+TGG | + | chr4.4:39823669-39823688 | MS.gene57371:CDS | 40.0% |
!! | TTTTGGGGGTTGTCAAAAGA+TGG | - | chr4.4:39820023-39820042 | None:intergenic | 40.0% |
AAGAGCTGCAAGAGCAATGA+AGG | - | chr4.4:39820252-39820271 | None:intergenic | 45.0% | |
AATCACAATTCATGCTGGCC+CGG | - | chr4.4:39821176-39821195 | None:intergenic | 45.0% | |
ACAATGCTACATAGTAGGGC+TGG | - | chr4.4:39823348-39823367 | None:intergenic | 45.0% | |
AGAAACCTCAAAAGGGTCGT+TGG | + | chr4.4:39820121-39820140 | MS.gene57371:CDS | 45.0% | |
ATCAGTGTCTCCAACCGAAT+TGG | + | chr4.4:39820079-39820098 | MS.gene57371:CDS | 45.0% | |
ATGTTCACTCGAAGCTCAAG+TGG | - | chr4.4:39823211-39823230 | None:intergenic | 45.0% | |
CTGCAAGAGCAATGAAGGTT+TGG | - | chr4.4:39820247-39820266 | None:intergenic | 45.0% | |
GCAAAGGGGGGTTACATTAA+GGG | - | chr4.4:39821585-39821604 | None:intergenic | 45.0% | |
GGACCAATCACAATTCATGC+TGG | - | chr4.4:39821181-39821200 | None:intergenic | 45.0% | |
TCCTTGATGCTGATGTAGGA+GGG | + | chr4.4:39819802-39819821 | MS.gene57371:CDS | 45.0% | |
TGCAAAGGGGGGTTACATTA+AGG | - | chr4.4:39821586-39821605 | None:intergenic | 45.0% | |
TGGGTGGTTACATTAAGGGA+CGG | + | chr4.4:39821827-39821846 | MS.gene57371:intron | 45.0% | |
TGGTTACATTAAGGGACGGA+GGG | + | chr4.4:39821831-39821850 | MS.gene57371:intron | 45.0% | |
TTCCTTGATGCTGATGTAGG+AGG | + | chr4.4:39819801-39819820 | MS.gene57371:CDS | 45.0% | |
TTTATGAACCCGAAACACGG+TGG | + | chr4.4:39821528-39821547 | MS.gene57371:intron | 45.0% | |
! | AATTTGTCCCGAGGCTTTGT+TGG | - | chr4.4:39821202-39821221 | None:intergenic | 45.0% |
! | GGCCGTCCCAATGTATTTTT+AGG | + | chr4.4:39822829-39822848 | MS.gene57371:intron | 45.0% |
! | TACTAGGGGGTGAATTTTGG+GGG | - | chr4.4:39820037-39820056 | None:intergenic | 45.0% |
! | TGATTGGTCCAACAAAGCCT+CGG | + | chr4.4:39821191-39821210 | MS.gene57371:intron | 45.0% |
!! | ACATAGTAGGGCTGGTCTAA+GGG | - | chr4.4:39823340-39823359 | None:intergenic | 45.0% |
!! | TACATAGTAGGGCTGGTCTA+AGG | - | chr4.4:39823341-39823360 | None:intergenic | 45.0% |
!!! | AACCACGATGCCGTTTTTTC+CGG | + | chr4.4:39821154-39821173 | MS.gene57371:intron | 45.0% |
!!! | ACGAGGCCTTTTGCTTTTTG+AGG | - | chr4.4:39820171-39820190 | None:intergenic | 45.0% |
!! | ATATAATAAAAAAATGAAAA+AGG | + | chr4.4:39822556-39822575 | MS.gene57371:intron | 5.0% |
!!! | TAAAAGTAAAATTATTTTTT+TGG | + | chr4.4:39821308-39821327 | MS.gene57371:intron | 5.0% |
!!! | TTATATTTTAAAAATATTGA+AGG | + | chr4.4:39820459-39820478 | MS.gene57371:intron | 5.0% |
AAACACGGTGGCCTATCAAC+TGG | + | chr4.4:39821540-39821559 | MS.gene57371:intron | 50.0% | |
AAATGCTGGATAACGCGAGG+TGG | + | chr4.4:39820845-39820864 | MS.gene57371:intron | 50.0% | |
ACCCTCCTACATCAGCATCA+AGG | - | chr4.4:39819806-39819825 | None:intergenic | 50.0% | |
AGGGGGGTTACATTAAGGGA+CGG | - | chr4.4:39821581-39821600 | None:intergenic | 50.0% | |
ATCGCTGCATAGGCATGGTT+TGG | - | chr4.4:39823611-39823630 | None:intergenic | 50.0% | |
GGAAAATGCTGGATAACGCG+AGG | + | chr4.4:39820842-39820861 | MS.gene57371:intron | 50.0% | |
GGGCCAGCATGAATTGTGAT+TGG | + | chr4.4:39821175-39821194 | MS.gene57371:intron | 50.0% | |
GGGTTACATTAAGGGACGGA+GGG | - | chr4.4:39821577-39821596 | None:intergenic | 50.0% | |
GTGGTTACATTAAGGGACGG+AGG | + | chr4.4:39821830-39821849 | MS.gene57371:intron | 50.0% | |
TCATGCTGGCCCGGAAAAAA+CGG | - | chr4.4:39821167-39821186 | None:intergenic | 50.0% | |
TCTTCATCGCTGCATAGGCA+TGG | - | chr4.4:39823616-39823635 | None:intergenic | 50.0% | |
TGATCTCTACCATGAGCACG+AGG | - | chr4.4:39820188-39820207 | None:intergenic | 50.0% | |
TTGATAGGCCACCGTGTTTC+GGG | - | chr4.4:39821539-39821558 | None:intergenic | 50.0% | |
! | GATTGGTCCAACAAAGCCTC+GGG | + | chr4.4:39821192-39821211 | MS.gene57371:intron | 50.0% |
! | GTTGATAGGCCACCGTGTTT+CGG | - | chr4.4:39821540-39821559 | None:intergenic | 50.0% |
!! | ATAGTAGGGCTGGTCTAAGG+GGG | - | chr4.4:39823338-39823357 | None:intergenic | 50.0% |
!! | CATAGTAGGGCTGGTCTAAG+GGG | - | chr4.4:39823339-39823358 | None:intergenic | 50.0% |
!!! | ACCACGATGCCGTTTTTTCC+GGG | + | chr4.4:39821155-39821174 | MS.gene57371:intron | 50.0% |
AGCAAAAGGCCTCGTGCTCA+TGG | + | chr4.4:39820176-39820195 | MS.gene57371:CDS | 55.0% | |
GCCACTAAAGCAGGGGCTTT+AGG | - | chr4.4:39823313-39823332 | None:intergenic | 55.0% | |
GCCTAAAGCCCCTGCTTTAG+TGG | + | chr4.4:39823309-39823328 | MS.gene57371:intron | 55.0% | |
GGGGTTACATTAAGGGACGG+AGG | - | chr4.4:39821578-39821597 | None:intergenic | 55.0% | |
AAGGGGGCTGCCACTAAAGC+AGG | - | chr4.4:39823322-39823341 | None:intergenic | 60.0% | |
AGGGGGCTGCCACTAAAGCA+GGG | - | chr4.4:39823321-39823340 | None:intergenic | 60.0% | |
GCCCGGAAAAAACGGCATCG+TGG | - | chr4.4:39821159-39821178 | None:intergenic | 60.0% | |
GGGGGCTGCCACTAAAGCAG+GGG | - | chr4.4:39823320-39823339 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 39819756 | 39823858 | 39819756 | ID=MS.gene57371 |
chr4.4 | mRNA | 39819756 | 39823858 | 39819756 | ID=MS.gene57371.t1;Parent=MS.gene57371 |
chr4.4 | exon | 39819756 | 39820289 | 39819756 | ID=MS.gene57371.t1.exon1;Parent=MS.gene57371.t1 |
chr4.4 | CDS | 39819756 | 39820289 | 39819756 | ID=cds.MS.gene57371.t1;Parent=MS.gene57371.t1 |
chr4.4 | exon | 39823499 | 39823858 | 39823499 | ID=MS.gene57371.t1.exon2;Parent=MS.gene57371.t1 |
chr4.4 | CDS | 39823499 | 39823858 | 39823499 | ID=cds.MS.gene57371.t1;Parent=MS.gene57371.t1 |
Gene Sequence |
Protein sequence |