Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57706.t1 | XP_024637800.1 | 96.6 | 291 | 0 | 1 | 1 | 281 | 52 | 342 | 1.30E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57706.t1 | P48000 | 74.1 | 274 | 52 | 3 | 19 | 278 | 159 | 427 | 8.0e-109 | 394.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57706.t1 | I3SDT1 | 96.2 | 291 | 1 | 1 | 1 | 281 | 52 | 342 | 2.8e-147 | 530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene57706.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051122 | MS.gene57706 | 0.826583 | 2.51E-54 | -1.69E-46 |
| MS.gene052493 | MS.gene57706 | 0.807 | 6.26E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene57706 | 0.809156 | 2.18E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene57706 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene052677 | MS.gene57706 | 0.809001 | 2.35E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene57706 | 0.824763 | 6.77E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene57706 | 0.806681 | 7.31E-50 | -1.69E-46 |
| MS.gene056779 | MS.gene57706 | 0.835803 | 1.36E-56 | -1.69E-46 |
| MS.gene057155 | MS.gene57706 | 0.817107 | 3.92E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene57706 | 0.826221 | 3.05E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene57706 | -0.805235 | 1.47E-49 | -1.69E-46 |
| MS.gene060520 | MS.gene57706 | 0.807851 | 4.13E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene57706 | 0.844721 | 6.35E-59 | -1.69E-46 |
| MS.gene060851 | MS.gene57706 | 0.860658 | 1.77E-63 | -1.69E-46 |
| MS.gene060852 | MS.gene57706 | 0.8584 | 8.46E-63 | -1.69E-46 |
| MS.gene060932 | MS.gene57706 | 0.827188 | 1.80E-54 | -1.69E-46 |
| MS.gene06121 | MS.gene57706 | 0.80788 | 4.07E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57706.t1 | MTR_4g116545 | 96.220 | 291 | 0 | 2 | 1 | 281 | 52 | 341 | 0.0 | 574 |
| MS.gene57706.t1 | MTR_4g116545 | 96.416 | 279 | 0 | 1 | 1 | 269 | 52 | 330 | 0.0 | 556 |
| MS.gene57706.t1 | MTR_2g461240 | 81.570 | 293 | 39 | 5 | 2 | 281 | 77 | 367 | 8.81e-169 | 472 |
| MS.gene57706.t1 | MTR_1g012960 | 76.296 | 270 | 50 | 4 | 15 | 271 | 169 | 437 | 8.16e-148 | 421 |
| MS.gene57706.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 2.26e-142 | 405 |
| MS.gene57706.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 2.53e-142 | 405 |
| MS.gene57706.t1 | MTR_3g106400 | 75.000 | 268 | 49 | 4 | 18 | 269 | 105 | 370 | 1.19e-141 | 405 |
| MS.gene57706.t1 | MTR_5g011070 | 64.388 | 278 | 85 | 3 | 15 | 278 | 23 | 300 | 5.73e-123 | 353 |
| MS.gene57706.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 17 | 254 | 17 | 245 | 5.18e-28 | 108 |
| MS.gene57706.t1 | MTR_1g084060 | 33.473 | 239 | 148 | 5 | 17 | 254 | 17 | 245 | 1.08e-27 | 108 |
| MS.gene57706.t1 | MTR_2g024390 | 31.933 | 238 | 141 | 6 | 20 | 254 | 118 | 337 | 1.28e-26 | 107 |
| MS.gene57706.t1 | MTR_1g017080 | 32.794 | 247 | 147 | 6 | 10 | 254 | 113 | 342 | 1.30e-25 | 104 |
| MS.gene57706.t1 | MTR_5g033720 | 32.500 | 240 | 139 | 7 | 20 | 254 | 73 | 294 | 7.38e-24 | 99.0 |
| MS.gene57706.t1 | MTR_5g085860 | 29.339 | 242 | 135 | 8 | 22 | 254 | 49 | 263 | 2.18e-19 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57706.t1 | AT5G11060 | 77.007 | 274 | 44 | 4 | 19 | 278 | 123 | 391 | 1.00e-149 | 424 |
| MS.gene57706.t1 | AT5G25220 | 76.838 | 272 | 44 | 3 | 19 | 276 | 159 | 425 | 1.28e-149 | 426 |
| MS.gene57706.t1 | AT5G25220 | 76.981 | 265 | 42 | 3 | 19 | 269 | 159 | 418 | 6.49e-146 | 416 |
| MS.gene57706.t1 | AT4G32040 | 70.037 | 267 | 64 | 6 | 19 | 272 | 118 | 381 | 7.26e-127 | 366 |
| MS.gene57706.t1 | AT4G32040 | 70.833 | 264 | 61 | 6 | 19 | 269 | 118 | 378 | 1.09e-126 | 365 |
| MS.gene57706.t1 | AT1G62990 | 61.957 | 276 | 88 | 4 | 8 | 269 | 18 | 290 | 2.45e-120 | 346 |
| MS.gene57706.t1 | AT1G23380 | 34.483 | 261 | 129 | 10 | 6 | 254 | 75 | 305 | 4.64e-29 | 113 |
| MS.gene57706.t1 | AT4G08150 | 34.553 | 246 | 130 | 7 | 20 | 254 | 135 | 360 | 2.01e-28 | 112 |
| MS.gene57706.t1 | AT1G70510 | 33.197 | 244 | 130 | 9 | 20 | 254 | 70 | 289 | 4.73e-28 | 110 |
| MS.gene57706.t1 | AT1G23380 | 34.221 | 263 | 129 | 11 | 6 | 254 | 75 | 307 | 3.21e-27 | 108 |
| MS.gene57706.t1 | AT1G70510 | 31.967 | 244 | 137 | 8 | 20 | 254 | 70 | 293 | 9.39e-27 | 106 |
| MS.gene57706.t1 | AT1G62360 | 33.473 | 239 | 138 | 6 | 20 | 254 | 122 | 343 | 1.33e-23 | 99.4 |
Find 69 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAGCTTGATCACTTTA+TGG | 0.159839 | 8.3:+9395183 | MS.gene57706:CDS |
| TTCTGTTGGAATTGGAAATA+TGG | 0.205132 | 8.3:+9395156 | MS.gene57706:CDS |
| CTACCTCTTGCGCTTGGTTT+TGG | 0.213600 | 8.3:-9400483 | None:intergenic |
| AAATATTCTTCTGTTGGAAT+TGG | 0.277819 | 8.3:+9395148 | MS.gene57706:CDS |
| GAATACAAAGCAGAGATATT+AGG | 0.306187 | 8.3:+9395007 | MS.gene57706:CDS |
| AATTAAAGCAAATAAATAAC+TGG | 0.339856 | 8.3:+9400405 | MS.gene57706:CDS |
| GGTGGCAATCACATTCTAAA+TGG | 0.351052 | 8.3:+9400225 | MS.gene57706:CDS |
| TTTCACAATTGTTGTCATTC+CGG | 0.359823 | 8.3:-9394970 | None:intergenic |
| GCTAGATTGGTGCAGGAAAC+AGG | 0.372105 | 8.3:+9400377 | MS.gene57706:CDS |
| GGTCTTTGATGGAACGAGTT+AGG | 0.372149 | 8.3:+9400078 | MS.gene57706:CDS |
| AACGAAGGAAGCAGCCTTGA+TGG | 0.386285 | 8.3:+9400008 | MS.gene57706:CDS |
| AGAGACTGAAAGGTCTTTGA+TGG | 0.405462 | 8.3:+9400067 | MS.gene57706:CDS |
| GGCGTCGATACTCTTGGCTT+TGG | 0.416116 | 8.3:+9400029 | MS.gene57706:CDS |
| TGGAGGCAGTGATGGCTTGT+TGG | 0.423089 | 8.3:+9398143 | MS.gene57706:CDS |
| GGAGGCAGTGATGGCTTGTT+GGG | 0.429166 | 8.3:+9398144 | MS.gene57706:CDS |
| ATTATGAGCAGGTGTATCTT+CGG | 0.435057 | 8.3:+9399917 | MS.gene57706:intron |
| ATTCTACGAAAGAGAAGAGC+TGG | 0.436569 | 8.3:+9400164 | MS.gene57706:CDS |
| CTTGATGGCGTCGATACTCT+TGG | 0.437382 | 8.3:+9400023 | MS.gene57706:CDS |
| CAGTCTCTGCAAAGCTTGAC+AGG | 0.437852 | 8.3:+9398175 | MS.gene57706:CDS |
| CATAAAGTGATCAAGCTCCT+TGG | 0.444189 | 8.3:-9395182 | None:intergenic |
| ATCCTTGGAAGCTGATCAAC+CGG | 0.446297 | 8.3:-9395088 | None:intergenic |
| ATTGCCACCAAGCTTTCAAA+AGG | 0.450033 | 8.3:-9400211 | None:intergenic |
| ATGATATCTTACAGTTGGAT+AGG | 0.451403 | 8.3:-9400249 | None:intergenic |
| GGAGGAAGATAAGGCTAGAT+TGG | 0.457401 | 8.3:+9400364 | MS.gene57706:intron |
| TTGTTGCAACTGTTCTTTGA+AGG | 0.460514 | 8.3:-9398101 | None:intergenic |
| GATTGATGCTCAGCTTCAAC+AGG | 0.462130 | 8.3:+9395108 | MS.gene57706:CDS |
| TCAATCAAAGGAAAAGGAAC+TGG | 0.471396 | 8.3:+9400432 | MS.gene57706:CDS |
| AGAAGAGCTGGGAAACTCCC+TGG | 0.471897 | 8.3:+9400176 | MS.gene57706:CDS |
| GTATCTTCGGGTGAAGGAAC+AGG | 0.474653 | 8.3:+9399930 | MS.gene57706:CDS |
| ATAAAGTGATCAAGCTCCTT+GGG | 0.475708 | 8.3:-9395181 | None:intergenic |
| AAAAGGGATGTGGTGTCCCC+AGG | 0.478534 | 8.3:-9400194 | None:intergenic |
| TTATGAGCAGGTGTATCTTC+GGG | 0.502400 | 8.3:+9399918 | MS.gene57706:intron |
| GTCAGACGATGAAGATGAGC+AGG | 0.503765 | 8.3:+9399962 | MS.gene57706:CDS |
| TCAGTCTCTGTGGGGACTAG+AGG | 0.508899 | 8.3:-9400053 | None:intergenic |
| CACCGGTTGATCAGCTTCCA+AGG | 0.508909 | 8.3:+9395086 | MS.gene57706:CDS |
| GAAGAGCTGGGAAACTCCCT+GGG | 0.514675 | 8.3:+9400177 | MS.gene57706:CDS |
| TGAAGCTGAGCATCAATCCT+TGG | 0.515964 | 8.3:-9395103 | None:intergenic |
| ATGGTACTACCTCTTGCGCT+TGG | 0.518902 | 8.3:-9400489 | None:intergenic |
| GGTTTATCAATCAAAGGAAA+AGG | 0.523630 | 8.3:+9400426 | MS.gene57706:CDS |
| TCATGCCATGGAGGCAGTGA+TGG | 0.523998 | 8.3:+9398135 | MS.gene57706:CDS |
| GCTCCAAAACCAAGCGCAAG+AGG | 0.527063 | 8.3:+9400480 | MS.gene57706:CDS |
| TGATATCTTACAGTTGGATA+GGG | 0.527756 | 8.3:-9400248 | None:intergenic |
| AGATAAGGCTAGATTGGTGC+AGG | 0.536981 | 8.3:+9400370 | MS.gene57706:CDS |
| GAATGACAACAATTGTGAAA+CGG | 0.541672 | 8.3:+9394973 | MS.gene57706:CDS |
| TTTGGAGCTACTAGAGGATG+GGG | 0.544084 | 8.3:-9400465 | None:intergenic |
| AAAGACCTTTCAGTCTCTGT+GGG | 0.544199 | 8.3:-9400062 | None:intergenic |
| AAAGCATGGATCGGAACCAC+CGG | 0.544529 | 8.3:+9394951 | None:intergenic |
| GTGTCTCAGAATTGCGACAC+CGG | 0.547847 | 8.3:+9395069 | MS.gene57706:CDS |
| CACAATTGTTGTCATTCCGG+TGG | 0.548848 | 8.3:-9394967 | None:intergenic |
| ACAAGCCATCACTGCCTCCA+TGG | 0.554613 | 8.3:-9398140 | None:intergenic |
| GCAGGTGTATCTTCGGGTGA+AGG | 0.559026 | 8.3:+9399924 | MS.gene57706:intron |
| ATAACTGGTTTATCAATCAA+AGG | 0.563797 | 8.3:+9400420 | MS.gene57706:CDS |
| CCAAGCTTTCAAAAGGGATG+TGG | 0.573990 | 8.3:-9400204 | None:intergenic |
| AAAGGGATGTGGTGTCCCCA+GGG | 0.576707 | 8.3:-9400193 | None:intergenic |
| TTCTACGAAAGAGAAGAGCT+GGG | 0.579028 | 8.3:+9400165 | MS.gene57706:CDS |
| ACATGTCCGTGTTCATGCCA+TGG | 0.585181 | 8.3:+9398123 | MS.gene57706:CDS |
| TAGTCCCCACAGAGACTGAA+AGG | 0.587654 | 8.3:+9400057 | MS.gene57706:CDS |
| CAAAGACCTTTCAGTCTCTG+TGG | 0.597386 | 8.3:-9400063 | None:intergenic |
| GATAATAATTGATCATAGAG+TGG | 0.604741 | 8.3:-9395034 | None:intergenic |
| CAAGAGTATCGACGCCATCA+AGG | 0.607066 | 8.3:-9400022 | None:intergenic |
| TTGCCACCAAGCTTTCAAAA+GGG | 0.608799 | 8.3:-9400210 | None:intergenic |
| AATTGGAAATATGGATCCCA+AGG | 0.614560 | 8.3:+9395165 | MS.gene57706:CDS |
| CTGCCTCCATGGCATGAACA+CGG | 0.617572 | 8.3:-9398129 | None:intergenic |
| AACGCTAGGTTATACAACGA+AGG | 0.654984 | 8.3:+9399993 | MS.gene57706:CDS |
| TTGAAGCATGAACTCAAACA+AGG | 0.656993 | 8.3:+9400107 | MS.gene57706:CDS |
| AGCAGGCAGAGAGTAACGCT+AGG | 0.662764 | 8.3:+9399979 | MS.gene57706:CDS |
| TGTCCGTGTTCATGCCATGG+AGG | 0.690107 | 8.3:+9398126 | MS.gene57706:CDS |
| AAGACCTTTCAGTCTCTGTG+GGG | 0.730543 | 8.3:-9400061 | None:intergenic |
| AAGAGCTGGGAAACTCCCTG+GGG | 0.766388 | 8.3:+9400178 | MS.gene57706:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGACATATTTATA+GGG | - | chr8.3:9395952-9395971 | None:intergenic | 10.0% |
| !! | AAATAATGTTGTATTTAAAA+AGG | + | chr8.3:9399354-9399373 | MS.gene57706:intron | 10.0% |
| !! | AATTATAAACATTAAATGTA+CGG | - | chr8.3:9399679-9399698 | None:intergenic | 10.0% |
| !! | CATTTAAATTTATAATATGT+AGG | - | chr8.3:9395671-9395690 | None:intergenic | 10.0% |
| !! | CTACATATTATAAATTTAAA+TGG | + | chr8.3:9395669-9395688 | MS.gene57706:intron | 10.0% |
| !! | TAAAAACAAACATAATAAAA+TGG | + | chr8.3:9395539-9395558 | MS.gene57706:intron | 10.0% |
| !! | TATTCATAATAGATTATTAT+AGG | + | chr8.3:9397074-9397093 | MS.gene57706:intron | 10.0% |
| !!! | AAAAATTCTAATTTTTTTTC+AGG | - | chr8.3:9396116-9396135 | None:intergenic | 10.0% |
| !!! | AAAATTTTTTATCTTGAAAA+TGG | + | chr8.3:9397135-9397154 | MS.gene57706:intron | 10.0% |
| !!! | ATATATATGAATTGTTTTAT+AGG | + | chr8.3:9400343-9400362 | MS.gene57706:intron | 10.0% |
| !!! | TATAATATTTTGAATTTTTC+TGG | + | chr8.3:9396242-9396261 | MS.gene57706:intron | 10.0% |
| !!! | TTAGTCATATAAAATTTTAA+TGG | - | chr8.3:9399585-9399604 | None:intergenic | 10.0% |
| !!! | TTTTTTAAGACATTATTTTA+TGG | + | chr8.3:9395464-9395483 | MS.gene57706:intron | 10.0% |
| !! | AAAAAAAACTCACTAAAAAA+AGG | - | chr8.3:9397324-9397343 | None:intergenic | 15.0% |
| !! | AAAAATAATAAACAATCCTT+TGG | - | chr8.3:9399096-9399115 | None:intergenic | 15.0% |
| !! | AAAAGTTCTTCAAATAAAAA+AGG | - | chr8.3:9399651-9399670 | None:intergenic | 15.0% |
| !! | AAAGTTCTTCAAATAAAAAA+GGG | - | chr8.3:9399650-9399669 | None:intergenic | 15.0% |
| !! | AACCCTAAATAAATATTATT+TGG | + | chr8.3:9397883-9397902 | MS.gene57706:intron | 15.0% |
| !! | AATTAAAGCAAATAAATAAC+TGG | + | chr8.3:9400405-9400424 | MS.gene57706:CDS | 15.0% |
| !! | ATTCAAATTCAAATAATGAT+CGG | + | chr8.3:9397821-9397840 | MS.gene57706:intron | 15.0% |
| !! | CAAAAAAAAAAAATTGTTTC+TGG | + | chr8.3:9397790-9397809 | MS.gene57706:intron | 15.0% |
| !! | CAAAAAATTGACATATTTAT+AGG | - | chr8.3:9395953-9395972 | None:intergenic | 15.0% |
| !! | CTAAAATAATCCATATAAAA+TGG | - | chr8.3:9399476-9399495 | None:intergenic | 15.0% |
| !! | GAAAAGTTAACATATTTATA+GGG | + | chr8.3:9396386-9396405 | MS.gene57706:intron | 15.0% |
| !! | GACTATTTAACAATTAAATA+AGG | + | chr8.3:9395827-9395846 | MS.gene57706:intron | 15.0% |
| !! | GTCCAAATAATATTTATTTA+GGG | - | chr8.3:9397888-9397907 | None:intergenic | 15.0% |
| !! | TCTTATAAACTACATTATTA+TGG | + | chr8.3:9399546-9399565 | MS.gene57706:intron | 15.0% |
| !! | TGTCCAAATAATATTTATTT+AGG | - | chr8.3:9397889-9397908 | None:intergenic | 15.0% |
| !! | TTTAACAATTAAATAAGGAT+AGG | + | chr8.3:9395832-9395851 | MS.gene57706:intron | 15.0% |
| !!! | ACATAAATTAAGTTGAAAAT+AGG | - | chr8.3:9396043-9396062 | None:intergenic | 15.0% |
| !!! | ATTCTGTGTTATTATTATTA+GGG | + | chr8.3:9395909-9395928 | MS.gene57706:intron | 15.0% |
| !!! | ATTTGTTAATGATTCAAAAA+AGG | - | chr8.3:9397221-9397240 | None:intergenic | 15.0% |
| !!! | CATAAATTAAGTTGAAAATA+GGG | - | chr8.3:9396042-9396061 | None:intergenic | 15.0% |
| !!! | TAGTGATTGAAAATTTTATA+GGG | - | chr8.3:9396011-9396030 | None:intergenic | 15.0% |
| !!! | TATTCTGTGTTATTATTATT+AGG | + | chr8.3:9395908-9395927 | MS.gene57706:intron | 15.0% |
| !!! | TGAAGATTGAAAATTTTATA+GGG | + | chr8.3:9396326-9396345 | MS.gene57706:intron | 15.0% |
| !!! | TGTGTAATTTTTTTTATTGA+GGG | + | chr8.3:9395881-9395900 | MS.gene57706:intron | 15.0% |
| !!! | TTATTATGATTAGTTGTATA+GGG | + | chr8.3:9398290-9398309 | MS.gene57706:intron | 15.0% |
| !!! | TTTCTAAGATATTTTATGAA+AGG | + | chr8.3:9395570-9395589 | MS.gene57706:intron | 15.0% |
| !!! | TTTTATATGGATTATTTTAG+AGG | + | chr8.3:9399476-9399495 | MS.gene57706:intron | 15.0% |
| !! | AAAAAGAGAGAAAATAGTAA+AGG | - | chr8.3:9396479-9396498 | None:intergenic | 20.0% |
| !! | AACTAACATAAAATGGTTTA+TGG | - | chr8.3:9400511-9400530 | None:intergenic | 20.0% |
| !! | AAGTCATAACTAACATAAAA+TGG | - | chr8.3:9400518-9400537 | None:intergenic | 20.0% |
| !! | AATCTCAAATATTAAAAGAG+TGG | - | chr8.3:9395620-9395639 | None:intergenic | 20.0% |
| !! | ATCCATATAAAATGGAAATA+TGG | - | chr8.3:9399468-9399487 | None:intergenic | 20.0% |
| !! | ATGGCAAAAGTTATTAAAAT+TGG | + | chr8.3:9395246-9395265 | MS.gene57706:intron | 20.0% |
| !! | ATTAAATCACACTAAAAAAG+AGG | - | chr8.3:9397723-9397742 | None:intergenic | 20.0% |
| !! | CATAATTTAGTGCAATAAAT+TGG | - | chr8.3:9395643-9395662 | None:intergenic | 20.0% |
| !! | CATACTAGTTATATAATAGA+AGG | + | chr8.3:9399159-9399178 | MS.gene57706:intron | 20.0% |
| !! | CGAAAAGTTAACATATTTAT+AGG | + | chr8.3:9396385-9396404 | MS.gene57706:intron | 20.0% |
| !! | TAAATAATGCCTCAATTATT+TGG | - | chr8.3:9398007-9398026 | None:intergenic | 20.0% |
| !! | TAGTACAAATAGAAGATTAT+GGG | + | chr8.3:9396560-9396579 | MS.gene57706:intron | 20.0% |
| !! | TATAAACTACATTATTATGG+AGG | + | chr8.3:9399549-9399568 | MS.gene57706:intron | 20.0% |
| !! | TATCTTTACAAATACGTAAT+TGG | - | chr8.3:9395516-9395535 | None:intergenic | 20.0% |
| !! | TCTAACAAGACAATAAATAA+TGG | + | chr8.3:9395227-9395246 | MS.gene57706:intron | 20.0% |
| !! | TTACTATGTCTCTAAATTTA+TGG | + | chr8.3:9395290-9395309 | MS.gene57706:intron | 20.0% |
| !!! | AAATTTTCAATCACTACTTT+TGG | + | chr8.3:9396015-9396034 | MS.gene57706:intron | 20.0% |
| !!! | AAATTTTCAATCTTCACTTT+TGG | - | chr8.3:9396322-9396341 | None:intergenic | 20.0% |
| !!! | AAGTTGAAAGAAAATTTTAG+AGG | + | chr8.3:9396354-9396373 | MS.gene57706:intron | 20.0% |
| !!! | AATTTGTCTCATTTTGTATT+GGG | + | chr8.3:9399394-9399413 | MS.gene57706:intron | 20.0% |
| !!! | AGTTGAAAGAAAATTTTAGA+GGG | + | chr8.3:9396355-9396374 | MS.gene57706:intron | 20.0% |
| !!! | ATAAGGGTTAAATATGTTTT+TGG | - | chr8.3:9396413-9396432 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr8.3:9396294-9396313 | MS.gene57706:intron | 20.0% |
| !!! | ATTAGGGTTAAATATGTTTT+TGG | + | chr8.3:9395925-9395944 | MS.gene57706:intron | 20.0% |
| !!! | CAACTTTTATTATTTTCTGA+TGG | + | chr8.3:9396673-9396692 | MS.gene57706:intron | 20.0% |
| !!! | CTGTGTAATTTTTTTTATTG+AGG | + | chr8.3:9395880-9395899 | MS.gene57706:intron | 20.0% |
| !!! | GTAGTGATTGAAAATTTTAT+AGG | - | chr8.3:9396012-9396031 | None:intergenic | 20.0% |
| !!! | GTGAAGATTGAAAATTTTAT+AGG | + | chr8.3:9396325-9396344 | MS.gene57706:intron | 20.0% |
| !!! | GTTATTATGATTAGTTGTAT+AGG | + | chr8.3:9398289-9398308 | MS.gene57706:intron | 20.0% |
| !!! | TAAATGGATAAAAGAGTATT+TGG | + | chr8.3:9395685-9395704 | MS.gene57706:intron | 20.0% |
| !!! | TATATGAATTGTTTTATAGG+AGG | + | chr8.3:9400346-9400365 | MS.gene57706:intron | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr8.3:9396295-9396314 | MS.gene57706:intron | 20.0% |
| !!! | TGAAAACTTTTTACAAAGAA+TGG | - | chr8.3:9399513-9399532 | None:intergenic | 20.0% |
| !!! | TGATAATAGTTAATTTGCTT+TGG | + | chr8.3:9397654-9397673 | MS.gene57706:intron | 20.0% |
| ! | AAAAAACTGAAAGAAAGCTT+GGG | - | chr8.3:9395450-9395469 | None:intergenic | 25.0% |
| ! | AAAGTTGAAGGAAAATTTAG+AGG | - | chr8.3:9395984-9396003 | None:intergenic | 25.0% |
| ! | AAATATTCTTCTGTTGGAAT+TGG | + | chr8.3:9395148-9395167 | MS.gene57706:CDS | 25.0% |
| ! | AACGATAAGAATCAAAGATA+CGG | - | chr8.3:9397609-9397628 | None:intergenic | 25.0% |
| ! | AAGAATAATAGTGAGGATAA+TGG | + | chr8.3:9396630-9396649 | MS.gene57706:intron | 25.0% |
| ! | AAGACACTATGAATTAAACT+AGG | - | chr8.3:9395409-9395428 | None:intergenic | 25.0% |
| ! | AAGTTGAAGGAAAATTTAGA+GGG | - | chr8.3:9395983-9396002 | None:intergenic | 25.0% |
| ! | AATAAAAAATTCCCCTCATT+TGG | - | chr8.3:9398733-9398752 | None:intergenic | 25.0% |
| ! | AATAATGAGAATGTACATCT+TGG | + | chr8.3:9397040-9397059 | MS.gene57706:intron | 25.0% |
| ! | AATAGACTTAGATGCATATT+GGG | + | chr8.3:9397423-9397442 | MS.gene57706:intron | 25.0% |
| ! | ACAAGCTTATCATATAATCT+AGG | - | chr8.3:9397252-9397271 | None:intergenic | 25.0% |
| ! | ATAAAAAATTCCCCTCATTT+GGG | - | chr8.3:9398732-9398751 | None:intergenic | 25.0% |
| ! | ATATGATTACATTCATCAGA+AGG | + | chr8.3:9399302-9399321 | MS.gene57706:intron | 25.0% |
| ! | ATATTTAGTCACATCAATTG+AGG | + | chr8.3:9397942-9397961 | MS.gene57706:intron | 25.0% |
| ! | ATCTTTACATTCTAACTTTG+AGG | + | chr8.3:9397510-9397529 | MS.gene57706:intron | 25.0% |
| ! | ATGCTTTGTACCATTATTAA+AGG | - | chr8.3:9396812-9396831 | None:intergenic | 25.0% |
| ! | ATTATTTAAGCATGGCTAAT+TGG | + | chr8.3:9398019-9398038 | MS.gene57706:intron | 25.0% |
| ! | CAAAAAGATATGAAACTCTT+AGG | + | chr8.3:9398462-9398481 | MS.gene57706:intron | 25.0% |
| ! | CAAGATAATAACCCTTAAAT+TGG | - | chr8.3:9396773-9396792 | None:intergenic | 25.0% |
| ! | CAAGCTTATCATATAATCTA+GGG | - | chr8.3:9397251-9397270 | None:intergenic | 25.0% |
| ! | CTAGTACAAATAGAAGATTA+TGG | + | chr8.3:9396559-9396578 | MS.gene57706:intron | 25.0% |
| ! | CTTCAAAAATATTCTTCTGT+TGG | + | chr8.3:9395142-9395161 | MS.gene57706:CDS | 25.0% |
| ! | GATAATAATTGATCATAGAG+TGG | - | chr8.3:9395037-9395056 | None:intergenic | 25.0% |
| ! | GATTATATGATAAGCTTGTA+AGG | + | chr8.3:9397253-9397272 | MS.gene57706:intron | 25.0% |
| ! | TAAAAAACTGAAAGAAAGCT+TGG | - | chr8.3:9395451-9395470 | None:intergenic | 25.0% |
| ! | TACAGCATTACTATAAAAAG+AGG | - | chr8.3:9399814-9399833 | None:intergenic | 25.0% |
| ! | TACTATACTCCCTTTAATAA+TGG | + | chr8.3:9396799-9396818 | MS.gene57706:intron | 25.0% |
| ! | TCACAAAAAGAATAATAGTG+AGG | + | chr8.3:9396623-9396642 | MS.gene57706:intron | 25.0% |
| ! | TCTTAAATGTGGAGAAATAA+AGG | - | chr8.3:9395787-9395806 | None:intergenic | 25.0% |
| ! | TGAAAGAAATAGAAGACATT+GGG | - | chr8.3:9398790-9398809 | None:intergenic | 25.0% |
| ! | TGCTTTGTACCATTATTAAA+GGG | - | chr8.3:9396811-9396830 | None:intergenic | 25.0% |
| ! | TTATTTAAGCATGGCTAATT+GGG | + | chr8.3:9398020-9398039 | MS.gene57706:intron | 25.0% |
| ! | TTATTTGCATATCTCTATGT+TGG | + | chr8.3:9400281-9400300 | MS.gene57706:intron | 25.0% |
| ! | TTGTGCAAGCATAATAATAA+GGG | - | chr8.3:9396429-9396448 | None:intergenic | 25.0% |
| ! | TTTATCCAAGAATCAAATTC+TGG | + | chr8.3:9399042-9399061 | MS.gene57706:intron | 25.0% |
| !! | AAGCCAAAAGAATTTTTGTT+TGG | - | chr8.3:9397386-9397405 | None:intergenic | 25.0% |
| !! | AATAATGGTACAAAGCATTT+AGG | + | chr8.3:9396814-9396833 | MS.gene57706:intron | 25.0% |
| !! | AGTTTCATATCTTTTTGTAG+AGG | - | chr8.3:9398459-9398478 | None:intergenic | 25.0% |
| !! | ATAACTGGTTTATCAATCAA+AGG | + | chr8.3:9400420-9400439 | MS.gene57706:CDS | 25.0% |
| !! | ATGATTTTCAACATTGTTTC+TGG | + | chr8.3:9397759-9397778 | MS.gene57706:intron | 25.0% |
| !! | CAATTTGTCTCATTTTGTAT+TGG | + | chr8.3:9399393-9399412 | MS.gene57706:intron | 25.0% |
| !! | CATTTTCACTGTTTAAAAAG+AGG | + | chr8.3:9398938-9398957 | MS.gene57706:intron | 25.0% |
| !! | CTAAATTTTCCTTCAACTTT+TGG | + | chr8.3:9395984-9396003 | MS.gene57706:intron | 25.0% |
| !! | GTCCATATTTCCATTTTATA+TGG | + | chr8.3:9399463-9399482 | MS.gene57706:intron | 25.0% |
| !! | TATTGATGATATCTTACAGT+TGG | - | chr8.3:9400257-9400276 | None:intergenic | 25.0% |
| !! | TGCATATTGGGTTTTTAAAT+CGG | + | chr8.3:9397435-9397454 | MS.gene57706:intron | 25.0% |
| !! | TGTCCAAACAAAAATTCTTT+TGG | + | chr8.3:9397380-9397399 | MS.gene57706:intron | 25.0% |
| !! | TTATTGTCTTGTTAGAAAAC+AGG | - | chr8.3:9395223-9395242 | None:intergenic | 25.0% |
| !! | TTGAAAGCTTGTAATTTTGT+AGG | - | chr8.3:9399438-9399457 | None:intergenic | 25.0% |
| !!! | AACTCTTTTTTCTTCTTCAT+AGG | - | chr8.3:9399330-9399349 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTCAAGTACTTGT+TGG | - | chr8.3:9397109-9397128 | None:intergenic | 25.0% |
| !!! | CTTGAAAACTCTGATTTTTT+AGG | + | chr8.3:9399606-9399625 | MS.gene57706:intron | 25.0% |
| !!! | TAAAAGAGTATTTGGTTTCA+TGG | + | chr8.3:9395693-9395712 | MS.gene57706:intron | 25.0% |
| !!! | TTACTACTTTCTAGTTTCTA+TGG | - | chr8.3:9399769-9399788 | None:intergenic | 25.0% |
| AAAAACAGTGTCATCAAGTT+TGG | - | chr8.3:9396971-9396990 | None:intergenic | 30.0% | |
| AGATTATGGGATTTGTATTG+TGG | + | chr8.3:9396573-9396592 | MS.gene57706:intron | 30.0% | |
| ATAAAAAGAGGCAAAATCTG+AGG | - | chr8.3:9399802-9399821 | None:intergenic | 30.0% | |
| ATCGTTCTTGTATTGAACAT+TGG | + | chr8.3:9397623-9397642 | MS.gene57706:intron | 30.0% | |
| ATGATATCTTACAGTTGGAT+AGG | - | chr8.3:9400252-9400271 | None:intergenic | 30.0% | |
| CAAATTCAAATAATGATCGG+AGG | + | chr8.3:9397824-9397843 | MS.gene57706:intron | 30.0% | |
| CTTGTGCAAGCATAATAATA+AGG | - | chr8.3:9396430-9396449 | None:intergenic | 30.0% | |
| GAATACAAAGCAGAGATATT+AGG | + | chr8.3:9395007-9395026 | MS.gene57706:CDS | 30.0% | |
| GAATAGACTTAGATGCATAT+TGG | + | chr8.3:9397422-9397441 | MS.gene57706:intron | 30.0% | |
| GAATGACAACAATTGTGAAA+CGG | + | chr8.3:9394973-9394992 | MS.gene57706:CDS | 30.0% | |
| GGTTTATCAATCAAAGGAAA+AGG | + | chr8.3:9400426-9400445 | MS.gene57706:CDS | 30.0% | |
| GTAAACCAGAATTTGATTCT+TGG | - | chr8.3:9399050-9399069 | None:intergenic | 30.0% | |
| GTGAAAGAAATAGAAGACAT+TGG | - | chr8.3:9398791-9398810 | None:intergenic | 30.0% | |
| GTTTGAACTATAGTAAGAAG+TGG | - | chr8.3:9395375-9395394 | None:intergenic | 30.0% | |
| TAAAAAATTCCCCTCATTTG+GGG | - | chr8.3:9398731-9398750 | None:intergenic | 30.0% | |
| TAAAAAGAGGCAAAATCTGA+GGG | - | chr8.3:9399801-9399820 | None:intergenic | 30.0% | |
| TCCACAAAATTAGGGAAATA+AGG | - | chr8.3:9396518-9396537 | None:intergenic | 30.0% | |
| TGAAATCCAACTAGAAACAA+TGG | + | chr8.3:9398901-9398920 | MS.gene57706:intron | 30.0% | |
| TGATATCTTACAGTTGGATA+GGG | - | chr8.3:9400251-9400270 | None:intergenic | 30.0% | |
| TTCTGTTGGAATTGGAAATA+TGG | + | chr8.3:9395156-9395175 | MS.gene57706:CDS | 30.0% | |
| TTGGTTGCATGGAAAAAATT+TGG | - | chr8.3:9399077-9399096 | None:intergenic | 30.0% | |
| TTTCACAATTGTTGTCATTC+CGG | - | chr8.3:9394973-9394992 | None:intergenic | 30.0% | |
| TTTGTGTGTCCAAATAATTG+AGG | + | chr8.3:9397995-9398014 | MS.gene57706:intron | 30.0% | |
| ! | ATTGAGGCATTATTTAAGCA+TGG | + | chr8.3:9398011-9398030 | MS.gene57706:intron | 30.0% |
| ! | GATAATGGTAGAAAAATCAG+TGG | + | chr8.3:9396645-9396664 | MS.gene57706:intron | 30.0% |
| ! | GCATATTGGGTTTTTAAATC+GGG | + | chr8.3:9397436-9397455 | MS.gene57706:intron | 30.0% |
| ! | GGATATAGTCTTAAACAATG+TGG | + | chr8.3:9399213-9399232 | MS.gene57706:intron | 30.0% |
| ! | GTCTAAGATCAATGAAACTA+TGG | + | chr8.3:9399888-9399907 | MS.gene57706:intron | 30.0% |
| ! | TGTTTTATAGGAGGAAGATA+AGG | + | chr8.3:9400355-9400374 | MS.gene57706:intron | 30.0% |
| !! | ACCTTATTTCCCTAATTTTG+TGG | + | chr8.3:9396514-9396533 | MS.gene57706:intron | 30.0% |
| !! | TTGTTTCCATTGTTTCTAGT+TGG | - | chr8.3:9398910-9398929 | None:intergenic | 30.0% |
| !!! | AATTTTTTCCATGCAACCAA+AGG | + | chr8.3:9399077-9399096 | MS.gene57706:intron | 30.0% |
| !!! | ATTTTTTATGATAGCAGTGC+AGG | + | chr8.3:9400650-9400669 | MS.gene57706:intron | 30.0% |
| !!! | TTTTTTGCTGAAACCTTCAT+GGG | + | chr8.3:9396909-9396928 | MS.gene57706:intron | 30.0% |
| AAAAAATTCCCCTCATTTGG+GGG | - | chr8.3:9398730-9398749 | None:intergenic | 35.0% | |
| AAAAAGAGGCAAAATCTGAG+GGG | - | chr8.3:9399800-9399819 | None:intergenic | 35.0% | |
| AAAGCCTTAAAGAACCATCA+TGG | + | chr8.3:9398867-9398886 | MS.gene57706:intron | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | - | chr8.3:9398787-9398806 | None:intergenic | 35.0% | |
| AATCTTGTCCCACTTGTTTA+GGG | + | chr8.3:9396866-9396885 | MS.gene57706:intron | 35.0% | |
| AATTGGAAATATGGATCCCA+AGG | + | chr8.3:9395165-9395184 | MS.gene57706:CDS | 35.0% | |
| ACCACAGAAATGTACAATGA+TGG | - | chr8.3:9397008-9397027 | None:intergenic | 35.0% | |
| ACCTTAAGCTCCACAAAATT+AGG | - | chr8.3:9396527-9396546 | None:intergenic | 35.0% | |
| AGACTCACACATCTTAAATG+TGG | - | chr8.3:9395798-9395817 | None:intergenic | 35.0% | |
| ATAAAGTGATCAAGCTCCTT+GGG | - | chr8.3:9395184-9395203 | None:intergenic | 35.0% | |
| ATCACACTAAAAAAGAGGAG+TGG | - | chr8.3:9397718-9397737 | None:intergenic | 35.0% | |
| ATTATGAGCAGGTGTATCTT+CGG | + | chr8.3:9399917-9399936 | MS.gene57706:intron | 35.0% | |
| CACAGAAATGTACAATGATG+GGG | - | chr8.3:9397006-9397025 | None:intergenic | 35.0% | |
| CCACAGAAATGTACAATGAT+GGG | - | chr8.3:9397007-9397026 | None:intergenic | 35.0% | |
| CCTTAAGCTCCACAAAATTA+GGG | - | chr8.3:9396526-9396545 | None:intergenic | 35.0% | |
| GAACTCAAAAATTGTGTTGG+GGG | - | chr8.3:9398708-9398727 | None:intergenic | 35.0% | |
| GGAACTCAAAAATTGTGTTG+GGG | - | chr8.3:9398709-9398728 | None:intergenic | 35.0% | |
| GGGAACTCAAAAATTGTGTT+GGG | - | chr8.3:9398710-9398729 | None:intergenic | 35.0% | |
| GTAAAGACTGCATTTGTCAA+GGG | - | chr8.3:9398267-9398286 | None:intergenic | 35.0% | |
| TAAACAATCCTTTGGTTGCA+TGG | - | chr8.3:9399088-9399107 | None:intergenic | 35.0% | |
| TAAAGACTGCATTTGTCAAG+GGG | - | chr8.3:9398266-9398285 | None:intergenic | 35.0% | |
| TAATCTTGTCCCACTTGTTT+AGG | + | chr8.3:9396865-9396884 | MS.gene57706:intron | 35.0% | |
| TCAATCAAAGGAAAAGGAAC+TGG | + | chr8.3:9400432-9400451 | MS.gene57706:CDS | 35.0% | |
| TCACACTAAAAAAGAGGAGT+GGG | - | chr8.3:9397717-9397736 | None:intergenic | 35.0% | |
| TCAGTGAATCAGATTTGTCT+TGG | + | chr8.3:9396734-9396753 | MS.gene57706:intron | 35.0% | |
| TGAACTCAAACAAGGTTACA+AGG | + | chr8.3:9400115-9400134 | MS.gene57706:intron | 35.0% | |
| TTATAGGGACCAAAAGTTGA+AGG | - | chr8.3:9395996-9396015 | None:intergenic | 35.0% | |
| TTCACCATGATGGTTCTTTA+AGG | - | chr8.3:9398874-9398893 | None:intergenic | 35.0% | |
| TTGAAGCATGAACTCAAACA+AGG | + | chr8.3:9400107-9400126 | MS.gene57706:CDS | 35.0% | |
| TTGTTGCAACTGTTCTTTGA+AGG | - | chr8.3:9398104-9398123 | None:intergenic | 35.0% | |
| TTTATGCTTCCACTAGAAAC+TGG | - | chr8.3:9399002-9399021 | None:intergenic | 35.0% | |
| ! | TCAAATACTCCAGTTTCTAG+TGG | + | chr8.3:9398990-9399009 | MS.gene57706:intron | 35.0% |
| ! | TGATTAGTTGTATAGGGTGA+TGG | + | chr8.3:9398296-9398315 | MS.gene57706:intron | 35.0% |
| ! | TGTGGCTAGTTCCAATTTAA+GGG | + | chr8.3:9396759-9396778 | MS.gene57706:intron | 35.0% |
| ! | TTTTTGCTGAAACCTTCATG+GGG | + | chr8.3:9396910-9396929 | MS.gene57706:intron | 35.0% |
| !! | ACTTTGAGGTGAAGTTTGTT+AGG | + | chr8.3:9397524-9397543 | MS.gene57706:intron | 35.0% |
| !! | CTTTAAAACGTATGAGGTCT+AGG | + | chr8.3:9399186-9399205 | MS.gene57706:intron | 35.0% |
| !! | GAAACTCTTAGGCTTTGTTT+GGG | + | chr8.3:9398473-9398492 | MS.gene57706:intron | 35.0% |
| !! | GAGGATTTTGGAAAAAAGGA+AGG | - | chr8.3:9398819-9398838 | None:intergenic | 35.0% |
| !! | GGTTCTTTAAGGCTTTGTTT+GGG | - | chr8.3:9398863-9398882 | None:intergenic | 35.0% |
| !! | TGAAACTCTTAGGCTTTGTT+TGG | + | chr8.3:9398472-9398491 | MS.gene57706:intron | 35.0% |
| !! | TGGTTCTTTAAGGCTTTGTT+TGG | - | chr8.3:9398864-9398883 | None:intergenic | 35.0% |
| !! | TGTACATCTTGGTATTGATG+TGG | + | chr8.3:9397051-9397070 | MS.gene57706:intron | 35.0% |
| !!! | CTTTTTTGCTGAAACCTTCA+TGG | + | chr8.3:9396908-9396927 | MS.gene57706:intron | 35.0% |
| AAAAGAGGCAAAATCTGAGG+GGG | - | chr8.3:9399799-9399818 | None:intergenic | 40.0% | |
| AAAGACCTTTCAGTCTCTGT+GGG | - | chr8.3:9400065-9400084 | None:intergenic | 40.0% | |
| AACGCTAGGTTATACAACGA+AGG | + | chr8.3:9399993-9400012 | MS.gene57706:CDS | 40.0% | |
| AGAGACTGAAAGGTCTTTGA+TGG | + | chr8.3:9400067-9400086 | MS.gene57706:CDS | 40.0% | |
| ATCTTGTCCCACTTGTTTAG+GGG | + | chr8.3:9396867-9396886 | MS.gene57706:intron | 40.0% | |
| ATTCTACGAAAGAGAAGAGC+TGG | + | chr8.3:9400164-9400183 | MS.gene57706:CDS | 40.0% | |
| ATTGCCACCAAGCTTTCAAA+AGG | - | chr8.3:9400214-9400233 | None:intergenic | 40.0% | |
| CAAGGAGCTTGATCACTTTA+TGG | + | chr8.3:9395183-9395202 | MS.gene57706:CDS | 40.0% | |
| CATAAAGTGATCAAGCTCCT+TGG | - | chr8.3:9395185-9395204 | None:intergenic | 40.0% | |
| CCCATCATTGTACATTTCTG+TGG | + | chr8.3:9397004-9397023 | MS.gene57706:intron | 40.0% | |
| CGTAAAGACTGCATTTGTCA+AGG | - | chr8.3:9398268-9398287 | None:intergenic | 40.0% | |
| GGGGAACTCAAAAATTGTGT+TGG | - | chr8.3:9398711-9398730 | None:intergenic | 40.0% | |
| GGTGGCAATCACATTCTAAA+TGG | + | chr8.3:9400225-9400244 | MS.gene57706:CDS | 40.0% | |
| TATGGTGCATCATTATGAGC+AGG | + | chr8.3:9399906-9399925 | MS.gene57706:intron | 40.0% | |
| TCAAAAATTGTGTTGGGGGA+GGG | - | chr8.3:9398704-9398723 | None:intergenic | 40.0% | |
| TCAAAATCTGATCCCCATGA+AGG | - | chr8.3:9396925-9396944 | None:intergenic | 40.0% | |
| TCACATTCTCTTCACCATGA+TGG | - | chr8.3:9398884-9398903 | None:intergenic | 40.0% | |
| TGCGAAGACATCAACATGTA+GGG | + | chr8.3:9395741-9395760 | MS.gene57706:intron | 40.0% | |
| TGCTCATACTTTAGCTAGGA+CGG | + | chr8.3:9397564-9397583 | MS.gene57706:intron | 40.0% | |
| TGGTTGCTCATACTTTAGCT+AGG | + | chr8.3:9397560-9397579 | MS.gene57706:intron | 40.0% | |
| TTATGAGCAGGTGTATCTTC+GGG | + | chr8.3:9399918-9399937 | MS.gene57706:intron | 40.0% | |
| TTCTACGAAAGAGAAGAGCT+GGG | + | chr8.3:9400165-9400184 | MS.gene57706:CDS | 40.0% | |
| TTGCCACCAAGCTTTCAAAA+GGG | - | chr8.3:9400213-9400232 | None:intergenic | 40.0% | |
| ! | ATCAGATTTGTCTTGGTGTG+TGG | + | chr8.3:9396741-9396760 | MS.gene57706:intron | 40.0% |
| ! | CCCTAATTTTGTGGAGCTTA+AGG | + | chr8.3:9396523-9396542 | MS.gene57706:intron | 40.0% |
| ! | CTTTGTTTGGGAGTTTGGAA+GGG | + | chr8.3:9398485-9398504 | MS.gene57706:intron | 40.0% |
| ! | GTGTGGCTAGTTCCAATTTA+AGG | + | chr8.3:9396758-9396777 | MS.gene57706:intron | 40.0% |
| !! | AGGGGAGGATTTTGGAAAAA+AGG | - | chr8.3:9398823-9398842 | None:intergenic | 40.0% |
| !! | AGTGTCTTAATTTGCCTCAC+TGG | + | chr8.3:9395421-9395440 | MS.gene57706:intron | 40.0% |
| !! | GGAGCTCTTTAAAACGTATG+AGG | + | chr8.3:9399180-9399199 | MS.gene57706:intron | 40.0% |
| !! | TAAGGCTTTGTTTGGGAGTT+TGG | - | chr8.3:9398856-9398875 | None:intergenic | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | + | chr8.3:9398480-9398499 | MS.gene57706:intron | 40.0% |
| !!! | TTTTGAGTTCCCCCAAATGA+GGG | + | chr8.3:9398718-9398737 | MS.gene57706:intron | 40.0% |
| !!! | TTTTGGAGCTACTAGAGGAT+GGG | - | chr8.3:9400469-9400488 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTTCCCCCAAATG+AGG | + | chr8.3:9398717-9398736 | MS.gene57706:intron | 40.0% |
| AACGTATGAGGTCTAGGTCT+AGG | + | chr8.3:9399192-9399211 | MS.gene57706:intron | 45.0% | |
| AAGACCTTTCAGTCTCTGTG+GGG | - | chr8.3:9400064-9400083 | None:intergenic | 45.0% | |
| AGAACACACCCCTAAACAAG+TGG | - | chr8.3:9396878-9396897 | None:intergenic | 45.0% | |
| AGATAAGGCTAGATTGGTGC+AGG | + | chr8.3:9400370-9400389 | MS.gene57706:CDS | 45.0% | |
| ATAGAAGACATTGGGAGGAG+AGG | - | chr8.3:9398782-9398801 | None:intergenic | 45.0% | |
| ATCCTTGGAAGCTGATCAAC+CGG | - | chr8.3:9395091-9395110 | None:intergenic | 45.0% | |
| CAAAGACCTTTCAGTCTCTG+TGG | - | chr8.3:9400066-9400085 | None:intergenic | 45.0% | |
| CACAATTGTTGTCATTCCGG+TGG | - | chr8.3:9394970-9394989 | None:intergenic | 45.0% | |
| CCAAGCTTTCAAAAGGGATG+TGG | - | chr8.3:9400207-9400226 | None:intergenic | 45.0% | |
| CTCAAAAATTGTGTTGGGGG+AGG | - | chr8.3:9398705-9398724 | None:intergenic | 45.0% | |
| CTGCGAAGACATCAACATGT+AGG | + | chr8.3:9395740-9395759 | MS.gene57706:intron | 45.0% | |
| GAACACACCCCTAAACAAGT+GGG | - | chr8.3:9396877-9396896 | None:intergenic | 45.0% | |
| GATTGATGCTCAGCTTCAAC+AGG | + | chr8.3:9395108-9395127 | MS.gene57706:CDS | 45.0% | |
| GCGAAGACATCAACATGTAG+GGG | + | chr8.3:9395742-9395761 | MS.gene57706:intron | 45.0% | |
| GGAGGAAGATAAGGCTAGAT+TGG | + | chr8.3:9400364-9400383 | MS.gene57706:intron | 45.0% | |
| GGAGGCAGATAAACACATGA+GGG | + | chr8.3:9397842-9397861 | MS.gene57706:intron | 45.0% | |
| GGTCTTTGATGGAACGAGTT+AGG | + | chr8.3:9400078-9400097 | MS.gene57706:CDS | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | - | chr8.3:9398781-9398800 | None:intergenic | 45.0% | |
| TGAAGCTGAGCATCAATCCT+TGG | - | chr8.3:9395106-9395125 | None:intergenic | 45.0% | |
| TGTTAGGAGACAAGCGAACA+TGG | + | chr8.3:9397540-9397559 | MS.gene57706:intron | 45.0% | |
| TTTGGGAGTTTGGAAGGGAA+GGG | + | chr8.3:9398490-9398509 | MS.gene57706:intron | 45.0% | |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr8.3:9398851-9398870 | None:intergenic | 45.0% |
| ! | TTTGAGTTCCCCCAAATGAG+GGG | + | chr8.3:9398719-9398738 | MS.gene57706:intron | 45.0% |
| ! | TTTGGAGCTACTAGAGGATG+GGG | - | chr8.3:9400468-9400487 | None:intergenic | 45.0% |
| !! | CATCCCTTTTGAAAGCTTGG+TGG | + | chr8.3:9400207-9400226 | MS.gene57706:CDS | 45.0% |
| !! | CCACATCCCTTTTGAAAGCT+TGG | + | chr8.3:9400204-9400223 | MS.gene57706:CDS | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+AGG | + | chr8.3:9398484-9398503 | MS.gene57706:intron | 45.0% |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr8.3:9398503-9398484 | None:intergenic | 45.0% |
| !! | GTTGTATAGGGTGATGGAAG+TGG | + | chr8.3:9398302-9398321 | MS.gene57706:intron | 45.0% |
| !!! | CTTGGTTTTGGAGCTACTAG+AGG | - | chr8.3:9400474-9400493 | None:intergenic | 45.0% |
| !!! | GTTTTGGAGCTACTAGAGGA+TGG | - | chr8.3:9400470-9400489 | None:intergenic | 45.0% |
| !!! | AAAAAATTCTAAATTTTTTT+TGG | + | chr8.3:9396210-9396229 | MS.gene57706:intron | 5.0% |
| !!! | ATGAATTTTTATATTTTTTA+CGG | - | chr8.3:9396171-9396190 | None:intergenic | 5.0% |
| AACGAAGGAAGCAGCCTTGA+TGG | + | chr8.3:9400008-9400027 | MS.gene57706:CDS | 50.0% | |
| ACATGTCCGTGTTCATGCCA+TGG | + | chr8.3:9398123-9398142 | MS.gene57706:CDS | 50.0% | |
| AGCTAGGACGGTCTGTTCTT+GGG | + | chr8.3:9397576-9397595 | MS.gene57706:intron | 50.0% | |
| ATGGTACTACCTCTTGCGCT+TGG | - | chr8.3:9400492-9400511 | None:intergenic | 50.0% | |
| CAGTCTCTGCAAAGCTTGAC+AGG | + | chr8.3:9398175-9398194 | MS.gene57706:CDS | 50.0% | |
| CGGAGGCAGATAAACACATG+AGG | + | chr8.3:9397841-9397860 | MS.gene57706:intron | 50.0% | |
| GCTAGATTGGTGCAGGAAAC+AGG | + | chr8.3:9400377-9400396 | MS.gene57706:CDS | 50.0% | |
| GTATCTTCGGGTGAAGGAAC+AGG | + | chr8.3:9399930-9399949 | MS.gene57706:CDS | 50.0% | |
| GTCAGACGATGAAGATGAGC+AGG | + | chr8.3:9399962-9399981 | MS.gene57706:CDS | 50.0% | |
| GTGTCTCAGAATTGCGACAC+CGG | + | chr8.3:9395069-9395088 | MS.gene57706:CDS | 50.0% | |
| GTTTGGGAGTTTGGAAGGGA+AGG | + | chr8.3:9398489-9398508 | MS.gene57706:intron | 50.0% | |
| TAGCTAGGACGGTCTGTTCT+TGG | + | chr8.3:9397575-9397594 | MS.gene57706:intron | 50.0% | |
| TAGTCCCCACAGAGACTGAA+AGG | + | chr8.3:9400057-9400076 | MS.gene57706:CDS | 50.0% | |
| ! | ATTGTGTTGGGGGAGGGTTT+TGG | - | chr8.3:9398698-9398717 | None:intergenic | 50.0% |
| ! | CTACCTCTTGCGCTTGGTTT+TGG | - | chr8.3:9400486-9400505 | None:intergenic | 50.0% |
| ! | GACAGCAGTACGAGGCATTT+GGG | + | chr8.3:9396695-9396714 | MS.gene57706:intron | 50.0% |
| ! | TTCTGATGGACAGCAGTACG+AGG | + | chr8.3:9396687-9396706 | MS.gene57706:intron | 50.0% |
| ! | TTGTGTTGGGGGAGGGTTTT+GGG | - | chr8.3:9398697-9398716 | None:intergenic | 50.0% |
| !! | CAAGAGTATCGACGCCATCA+AGG | - | chr8.3:9400025-9400044 | None:intergenic | 50.0% |
| !! | CTTGATGGCGTCGATACTCT+TGG | + | chr8.3:9400023-9400042 | MS.gene57706:CDS | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr8.3:9398502-9398483 | None:intergenic | 50.0% |
| AAAAGGGATGTGGTGTCCCC+AGG | - | chr8.3:9400197-9400216 | None:intergenic | 55.0% | |
| AAAGGGATGTGGTGTCCCCA+GGG | - | chr8.3:9400196-9400215 | None:intergenic | 55.0% | |
| AAGAGCTGGGAAACTCCCTG+GGG | + | chr8.3:9400178-9400197 | MS.gene57706:CDS | 55.0% | |
| ACAAGCCATCACTGCCTCCA+TGG | - | chr8.3:9398143-9398162 | None:intergenic | 55.0% | |
| ACATTGGGAGGAGAGGGCTT+TGG | - | chr8.3:9398775-9398794 | None:intergenic | 55.0% | |
| AGAAGAGCTGGGAAACTCCC+TGG | + | chr8.3:9400176-9400195 | MS.gene57706:CDS | 55.0% | |
| AGCAGGCAGAGAGTAACGCT+AGG | + | chr8.3:9399979-9399998 | MS.gene57706:CDS | 55.0% | |
| CTGCCTCCATGGCATGAACA+CGG | - | chr8.3:9398132-9398151 | None:intergenic | 55.0% | |
| GAAAGCTTGGGAGTCCAGTG+AGG | - | chr8.3:9395438-9395457 | None:intergenic | 55.0% | |
| GAAGAGCTGGGAAACTCCCT+GGG | + | chr8.3:9400177-9400196 | MS.gene57706:CDS | 55.0% | |
| GAGGCAAAATCTGAGGGGGT+TGG | - | chr8.3:9399795-9399814 | None:intergenic | 55.0% | |
| GAGTTTGGAAGGGAAGGGAG+GGG | + | chr8.3:9398495-9398514 | MS.gene57706:intron | 55.0% | |
| GCAGGTGTATCTTCGGGTGA+AGG | + | chr8.3:9399924-9399943 | MS.gene57706:intron | 55.0% | |
| GCTCCAAAACCAAGCGCAAG+AGG | + | chr8.3:9400480-9400499 | MS.gene57706:CDS | 55.0% | |
| GGAGTTTGGAAGGGAAGGGA+GGG | + | chr8.3:9398494-9398513 | MS.gene57706:intron | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+GGG | - | chr8.3:9398847-9398866 | None:intergenic | 55.0% | |
| TCAGTCTCTGTGGGGACTAG+AGG | - | chr8.3:9400056-9400075 | None:intergenic | 55.0% | |
| TCATGCCATGGAGGCAGTGA+TGG | + | chr8.3:9398135-9398154 | MS.gene57706:CDS | 55.0% | |
| TGTCCGTGTTCATGCCATGG+AGG | + | chr8.3:9398126-9398145 | MS.gene57706:CDS | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+AGG | - | chr8.3:9398848-9398867 | None:intergenic | 55.0% | |
| TTTGGGAGTTTGGAGGGGAG+GGG | - | chr8.3:9398846-9398865 | None:intergenic | 55.0% | |
| ! | CACCGGTTGATCAGCTTCCA+AGG | + | chr8.3:9395086-9395105 | MS.gene57706:CDS | 55.0% |
| ! | GGACAGCAGTACGAGGCATT+TGG | + | chr8.3:9396694-9396713 | MS.gene57706:intron | 55.0% |
| ! | TGGAGGCAGTGATGGCTTGT+TGG | + | chr8.3:9398143-9398162 | MS.gene57706:CDS | 55.0% |
| ! | TGTGTTGGGGGAGGGTTTTG+GGG | - | chr8.3:9398696-9398715 | None:intergenic | 55.0% |
| !! | GGAGGCAGTGATGGCTTGTT+GGG | + | chr8.3:9398144-9398163 | MS.gene57706:CDS | 55.0% |
| !! | GGCGTCGATACTCTTGGCTT+TGG | + | chr8.3:9400029-9400048 | MS.gene57706:CDS | 55.0% |
| !!! | AGGGTTTTGGGGGGTTATGG+AGG | - | chr8.3:9398685-9398704 | None:intergenic | 55.0% |
| !!! | GGGTTTTGGGGGGTTATGGA+GGG | - | chr8.3:9398684-9398703 | None:intergenic | 55.0% |
| GGGAGTTTGGAAGGGAAGGG+AGG | + | chr8.3:9398493-9398512 | MS.gene57706:intron | 60.0% | |
| TTGGAAGGGAAGGGAGGGGA+GGG | + | chr8.3:9398499-9398518 | MS.gene57706:intron | 60.0% | |
| TTTGGAAGGGAAGGGAGGGG+AGG | + | chr8.3:9398498-9398517 | MS.gene57706:intron | 60.0% | |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | - | chr8.3:9398772-9398791 | None:intergenic | 60.0% |
| !! | GTGTTGGGGGAGGGTTTTGG+GGG | - | chr8.3:9398695-9398714 | None:intergenic | 60.0% |
| !!! | GGGAGGGTTTTGGGGGGTTA+TGG | - | chr8.3:9398688-9398707 | None:intergenic | 60.0% |
| !!! | TGTTGGGGGAGGGTTTTGGG+GGG | - | chr8.3:9398694-9398713 | None:intergenic | 60.0% |
| GAAGGGAGGGGAGGGCTTTG+GGG | + | chr8.3:9398507-9398526 | MS.gene57706:intron | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | - | chr8.3:9398841-9398860 | None:intergenic | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | + | chr8.3:9398506-9398525 | MS.gene57706:intron | 65.0% | |
| GGAGTTTGGAGGGGAGGGGA+GGG | - | chr8.3:9398842-9398861 | None:intergenic | 65.0% | |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | + | chr8.3:9398508-9398527 | MS.gene57706:intron | 65.0% |
| ! | GGGAGGGGAGGGGAGGATTT+TGG | - | chr8.3:9398831-9398850 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | chr8.3:9398505-9398524 | MS.gene57706:intron | 70.0% | |
| GGGAGTTTGGAGGGGAGGGG+AGG | - | chr8.3:9398843-9398862 | None:intergenic | 70.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | - | chr8.3:9398838-9398857 | None:intergenic | 70.0% | |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | + | chr8.3:9398509-9398528 | MS.gene57706:intron | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | + | chr8.3:9398513-9398532 | MS.gene57706:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9394956 | 9400700 | 9394956 | ID=MS.gene57706 |
| chr8.3 | mRNA | 9394956 | 9400700 | 9394956 | ID=MS.gene57706.t1;Parent=MS.gene57706 |
| chr8.3 | exon | 9394956 | 9395204 | 9394956 | ID=MS.gene57706.t1.exon1;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9394956 | 9395204 | 9394956 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| chr8.3 | exon | 9398076 | 9398196 | 9398076 | ID=MS.gene57706.t1.exon2;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9398076 | 9398196 | 9398076 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| chr8.3 | exon | 9399928 | 9400128 | 9399928 | ID=MS.gene57706.t1.exon3;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9399928 | 9400128 | 9399928 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| chr8.3 | exon | 9400159 | 9400259 | 9400159 | ID=MS.gene57706.t1.exon4;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9400159 | 9400259 | 9400159 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| chr8.3 | exon | 9400365 | 9400501 | 9400365 | ID=MS.gene57706.t1.exon5;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9400365 | 9400501 | 9400365 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| chr8.3 | exon | 9400664 | 9400700 | 9400664 | ID=MS.gene57706.t1.exon6;Parent=MS.gene57706.t1 |
| chr8.3 | CDS | 9400664 | 9400700 | 9400664 | ID=cds.MS.gene57706.t1;Parent=MS.gene57706.t1 |
| Gene Sequence |
| Protein sequence |
