AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene57806

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57806.t1 MTR_6g078450 83.977 518 81 2 1 516 1 518 0.0 920
MS.gene57806.t1 MTR_6g078380 85.632 522 72 3 1 519 1 522 0.0 920
MS.gene57806.t1 MTR_6g078330 74.951 515 129 0 5 519 8 522 0.0 833
MS.gene57806.t1 MTR_6g078450 85.120 457 66 2 1 455 1 457 0.0 822
MS.gene57806.t1 MTR_4g066580 67.568 518 161 3 1 512 1 517 0.0 741
MS.gene57806.t1 MTR_3g028720 66.667 519 163 3 1 512 1 516 0.0 739
MS.gene57806.t1 MTR_2g098520 70.332 482 142 1 29 510 30 510 0.0 733
MS.gene57806.t1 MTR_2g098790 66.926 514 164 3 1 509 1 513 0.0 732
MS.gene57806.t1 MTR_2g098540 68.200 500 155 2 11 510 12 507 0.0 728
MS.gene57806.t1 MTR_4g066590 67.835 485 156 0 24 508 23 507 0.0 717
MS.gene57806.t1 MTR_4g066240 65.873 504 168 1 10 509 8 511 0.0 716
MS.gene57806.t1 MTR_4g066240 65.743 505 168 2 10 509 8 512 0.0 711
MS.gene57806.t1 MTR_4g066210 68.487 476 150 0 34 509 43 518 0.0 711
MS.gene57806.t1 MTR_4g066630 68.067 476 152 0 33 508 38 513 0.0 710
MS.gene57806.t1 MTR_6g078330 76.794 418 97 0 102 519 1 418 0.0 694
MS.gene57806.t1 MTR_2g098540 69.651 458 139 0 53 510 6 463 0.0 693
MS.gene57806.t1 MTR_5g071520 64.695 524 171 2 1 510 1 524 0.0 682
MS.gene57806.t1 MTR_4g066640 61.144 507 193 2 5 510 10 513 0.0 670
MS.gene57806.t1 MTR_4g066330 62.305 512 160 5 2 511 14 494 0.0 659
MS.gene57806.t1 MTR_3g028720 66.667 462 144 3 1 455 1 459 0.0 655
MS.gene57806.t1 MTR_6g078330 74.631 406 101 1 114 519 15 418 0.0 654
MS.gene57806.t1 MTR_4g066340 68.981 432 134 0 78 509 7 438 0.0 644
MS.gene57806.t1 MTR_4g066280 60.159 502 171 4 11 509 17 492 0.0 636
MS.gene57806.t1 MTR_4g066630 68.483 422 133 0 33 454 38 459 0.0 634
MS.gene57806.t1 MTR_3g026280 62.083 480 177 2 31 510 19 493 0.0 630
MS.gene57806.t1 MTR_4g066580 68.765 429 127 3 1 423 1 428 0.0 617
MS.gene57806.t1 MTR_3g028720 68.075 426 126 3 1 419 1 423 0.0 613
MS.gene57806.t1 MTR_6g078330 75.946 370 89 0 5 374 8 377 0.0 613
MS.gene57806.t1 MTR_4g023000 58.704 494 198 3 16 509 6 493 0.0 613
MS.gene57806.t1 MTR_4g066630 70.543 387 114 0 33 419 38 424 0.0 597
MS.gene57806.t1 MTR_4g066240 65.459 414 139 1 10 419 8 421 0.0 581
MS.gene57806.t1 MTR_4g067040 70.133 375 112 0 33 407 33 407 0.0 574
MS.gene57806.t1 MTR_4g083000 54.455 505 223 4 7 509 3 502 0.0 572
MS.gene57806.t1 MTR_4g015420 56.600 500 177 7 22 509 53 524 0.0 565
MS.gene57806.t1 MTR_3g026400 55.975 477 204 4 33 508 36 507 0.0 564
MS.gene57806.t1 MTR_3g028720 67.609 389 116 3 1 382 1 386 0.0 560
MS.gene57806.t1 MTR_2g043200 57.023 477 171 5 39 509 70 518 0.0 551
MS.gene57806.t1 MTR_4g067040 72.000 350 98 0 33 382 33 382 0.0 551
MS.gene57806.t1 MTR_3g026620 53.438 509 226 4 7 508 4 508 0.0 545
MS.gene57806.t1 MTR_3g026400 55.246 467 201 5 43 508 17 476 0.0 540
MS.gene57806.t1 MTR_5g044000 51.434 523 224 7 13 508 1 520 0.0 538
MS.gene57806.t1 MTR_4g066630 71.137 343 99 0 33 375 38 380 0.0 536
MS.gene57806.t1 MTR_4g015460 54.365 504 191 8 21 513 29 504 0.0 532
MS.gene57806.t1 MTR_4g081530 51.881 505 235 5 11 512 3 502 0.0 522
MS.gene57806.t1 MTR_0110s0040 50.000 502 243 6 10 511 20 513 1.12e-176 507
MS.gene57806.t1 MTR_4g066640 60.677 384 140 4 11 386 9 389 4.94e-175 498
MS.gene57806.t1 MTR_0110s0030 49.004 502 248 6 10 511 20 513 5.81e-174 500
MS.gene57806.t1 MTR_3g033790 49.378 482 230 5 31 512 16 483 4.16e-170 489
MS.gene57806.t1 MTR_3g033810 50.000 478 226 4 32 509 19 483 3.13e-169 488
MS.gene57806.t1 MTR_4g131810 49.260 473 235 4 39 508 33 503 8.86e-167 482
MS.gene57806.t1 MTR_2g079580 47.347 490 247 6 27 512 25 507 2.65e-162 471
MS.gene57806.t1 MTR_2g079550 47.942 486 242 6 27 508 23 501 5.67e-161 468
MS.gene57806.t1 MTR_4g083000 54.634 410 182 2 102 509 1 408 1.17e-160 462
MS.gene57806.t1 MTR_2g022760 46.457 508 262 7 10 512 12 514 3.59e-160 466
MS.gene57806.t1 MTR_4g131800 48.016 504 253 9 13 512 495 993 5.03e-157 474
MS.gene57806.t1 MTR_7g068910 44.834 513 264 8 1 511 1 496 3.57e-151 442
MS.gene57806.t1 MTR_2g022710 44.737 494 262 7 24 514 29 514 4.73e-151 442
MS.gene57806.t1 MTR_7g068910 43.977 523 264 9 1 511 1 506 7.11e-148 434
MS.gene57806.t1 MTR_4g016920 45.248 484 247 7 33 513 26 494 2.62e-147 432
MS.gene57806.t1 MTR_5g068740 42.996 514 263 10 1 509 1 489 1.76e-141 417
MS.gene57806.t1 MTR_3g026400 59.561 319 126 2 33 351 36 351 5.59e-141 411
MS.gene57806.t1 MTR_7g033860 44.444 477 246 7 36 508 50 511 6.20e-141 416
MS.gene57806.t1 MTR_1g088610 42.940 517 258 10 1 509 1 488 2.97e-140 419
MS.gene57806.t1 MTR_1g088610 34.722 144 71 3 383 509 476 613 8.58e-20 93.2
MS.gene57806.t1 MTR_0108s0030 42.706 473 242 4 36 508 5 448 5.11e-137 404
MS.gene57806.t1 MTR_2g079580 48.866 397 193 5 27 419 25 415 2.18e-134 396
MS.gene57806.t1 MTR_7g051610 43.515 478 248 8 35 510 76 533 1.47e-128 385
MS.gene57806.t1 MTR_2g022760 46.154 416 214 7 102 512 1 411 2.51e-128 380
MS.gene57806.t1 MTR_7g051510 44.561 478 239 10 35 508 76 531 6.11e-128 384
MS.gene57806.t1 MTR_2g022710 44.240 434 233 5 24 455 29 455 1.06e-127 381
MS.gene57806.t1 MTR_2g022710 44.240 434 233 5 24 455 29 455 2.37e-127 380
MS.gene57806.t1 MTR_7g051650 42.857 483 251 7 35 513 76 537 5.45e-125 376
MS.gene57806.t1 MTR_0110s0040 49.441 358 176 4 10 367 20 372 2.74e-124 370
MS.gene57806.t1 MTR_7g051650 42.443 483 249 7 35 513 76 533 3.33e-123 371
MS.gene57806.t1 MTR_2g022710 45.729 398 207 5 24 419 29 419 3.43e-123 367
MS.gene57806.t1 MTR_2g022710 43.269 416 230 5 102 514 1 413 1.15e-121 363
MS.gene57806.t1 MTR_1g088630 42.151 465 215 10 53 509 14 432 2.39e-120 362
MS.gene57806.t1 MTR_7g068900 44.048 420 219 5 97 513 17 423 4.62e-119 359
MS.gene57806.t1 MTR_4g016920 43.373 415 218 6 102 513 1 401 3.06e-118 355
MS.gene57806.t1 MTR_2g022710 45.312 384 201 5 24 405 29 405 3.62e-117 352
MS.gene57806.t1 MTR_2g022710 46.260 361 185 5 24 382 29 382 2.46e-110 335
MS.gene57806.t1 MTR_7g056747 41.050 419 221 4 96 513 9 402 1.33e-104 319
MS.gene57806.t1 MTR_1g088630 46.018 339 152 6 36 372 29 338 1.44e-99 305
MS.gene57806.t1 MTR_4g016920 49.817 273 134 2 102 373 1 271 1.25e-92 285
MS.gene57806.t1 MTR_1g088630 51.504 266 123 3 36 300 29 289 4.42e-91 281
MS.gene57806.t1 MTR_0110s0020 51.867 241 112 3 34 274 43 279 5.85e-87 271
MS.gene57806.t1 MTR_5g069350 44.382 178 46 5 348 509 48 188 3.71e-33 125
MS.gene57806.t1 MTR_4g122980 26.230 427 240 13 98 517 183 541 1.99e-28 119
MS.gene57806.t1 MTR_8g038650 41.525 118 59 1 248 355 35 152 1.67e-23 97.4
MS.gene57806.t1 MTR_8g038650 57.407 54 22 1 43 96 7 59 5.99e-13 67.4
MS.gene57806.t1 MTR_6g078770 50.000 80 22 2 1 79 1 63 8.20e-13 70.1
MS.gene57806.t1 MTR_6g078770 50.000 80 22 2 1 79 1 63 9.92e-13 70.1
MS.gene57806.t1 MTR_4g061170 53.846 52 22 1 446 495 13 64 7.11e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene57806.t1 AT2G44480 55.738 488 215 1 30 517 31 517 0.0 580
MS.gene57806.t1 AT2G44480 55.738 488 215 1 30 517 62 548 0.0 580
MS.gene57806.t1 AT5G42260 54.871 503 215 4 3 504 6 497 0.0 577
MS.gene57806.t1 AT5G44640 54.234 496 214 4 24 511 14 504 0.0 576
MS.gene57806.t1 AT2G44450 54.959 484 213 2 28 511 25 503 0.0 573
MS.gene57806.t1 AT3G60130 55.346 477 207 3 34 509 30 501 0.0 552
MS.gene57806.t1 AT1G26560 53.734 482 217 4 30 508 28 506 0.0 546
MS.gene57806.t1 AT5G54570 52.990 485 215 4 31 508 27 505 0.0 532
MS.gene57806.t1 AT2G25630 50.895 503 217 5 17 511 6 486 0.0 530
MS.gene57806.t1 AT3G60140 50.400 500 241 6 25 519 16 513 0.0 525
MS.gene57806.t1 AT5G24550 50.520 481 233 4 34 510 32 511 0.0 520
MS.gene57806.t1 AT1G47600 52.807 481 215 5 29 508 40 509 0.0 519
MS.gene57806.t1 AT1G51470 53.015 481 214 5 29 508 40 509 0.0 518
MS.gene57806.t1 AT1G47600 52.391 481 216 5 29 508 40 508 7.31e-180 515
MS.gene57806.t1 AT2G44460 51.139 483 227 7 31 508 26 504 2.65e-175 506
MS.gene57806.t1 AT3G60120 51.037 482 229 6 33 510 13 491 7.57e-175 504
MS.gene57806.t1 AT3G18080 52.301 478 220 6 34 510 39 509 1.64e-174 502
MS.gene57806.t1 AT5G24540 48.350 515 257 6 1 510 1 511 1.36e-173 500
MS.gene57806.t1 AT3G18070 50.203 492 223 9 21 510 21 492 1.19e-172 496
MS.gene57806.t1 AT3G18070 50.203 492 229 9 21 510 21 498 6.61e-172 494
MS.gene57806.t1 AT2G44470 46.761 494 255 6 31 519 26 516 4.19e-170 493
MS.gene57806.t1 AT2G44480 54.087 416 190 1 102 517 1 415 1.63e-169 485
MS.gene57806.t1 AT5G36890 49.177 486 234 4 25 509 7 480 8.03e-167 481
MS.gene57806.t1 AT5G36890 49.177 486 234 4 25 509 7 480 9.08e-167 481
MS.gene57806.t1 AT5G25980 47.025 521 265 9 1 517 17 530 2.74e-166 482
MS.gene57806.t1 AT2G44490 47.412 483 246 6 33 509 13 493 3.62e-165 480
MS.gene57806.t1 AT3G60130 54.699 415 182 3 96 509 40 449 9.63e-165 475
MS.gene57806.t1 AT5G26000 47.429 525 258 10 1 518 5 518 1.89e-161 469
MS.gene57806.t1 AT5G54570 51.740 431 196 3 31 455 27 451 2.26e-160 463
MS.gene57806.t1 AT3G21370 46.296 486 251 7 31 509 30 512 1.63e-159 464
MS.gene57806.t1 AT1G75940 46.414 502 255 8 18 509 21 518 4.18e-158 461
MS.gene57806.t1 AT1G61820 47.718 482 244 6 33 510 29 506 9.07e-158 459
MS.gene57806.t1 AT3G09260 45.868 484 255 6 31 510 32 512 1.06e-156 457
MS.gene57806.t1 AT2G32860 46.058 482 256 4 33 511 93 573 1.32e-156 460
MS.gene57806.t1 AT5G28510 44.272 515 274 8 3 508 9 519 1.85e-156 456
MS.gene57806.t1 AT2G32860 45.643 482 259 3 33 511 93 574 3.00e-156 459
MS.gene57806.t1 AT3G03640 43.340 533 283 8 1 519 1 528 5.85e-156 455
MS.gene57806.t1 AT3G60130 52.771 415 179 4 96 509 40 438 1.62e-155 451
MS.gene57806.t1 AT1G52400 46.012 489 248 10 30 509 35 516 2.45e-153 448
MS.gene57806.t1 AT1G52400 46.012 489 248 10 30 509 35 516 2.45e-153 448
MS.gene57806.t1 AT4G21760 45.661 484 249 8 38 517 58 531 2.88e-152 446
MS.gene57806.t1 AT4G27830 45.582 498 252 6 14 508 3 484 3.81e-152 444
MS.gene57806.t1 AT1G61810 44.379 507 274 6 10 512 9 511 4.31e-152 445
MS.gene57806.t1 AT1G66280 45.669 508 263 8 6 508 11 510 1.11e-151 444
MS.gene57806.t1 AT5G54570 51.691 414 187 4 102 508 1 408 5.60e-150 436
MS.gene57806.t1 AT1G02850 45.912 477 239 6 35 509 27 486 3.23e-148 434
MS.gene57806.t1 AT5G25980 47.046 457 234 6 1 455 17 467 1.46e-147 431
MS.gene57806.t1 AT5G25980 47.046 457 234 6 1 455 17 467 1.46e-147 431
MS.gene57806.t1 AT1G66270 46.170 483 250 7 31 508 33 510 7.28e-147 432
MS.gene57806.t1 AT5G24540 46.943 458 235 5 1 454 1 454 1.31e-146 429
MS.gene57806.t1 AT1G61810 44.694 490 263 6 10 495 9 494 1.96e-146 431
MS.gene57806.t1 AT4G21760 44.835 484 243 9 38 517 58 521 4.01e-145 427
MS.gene57806.t1 AT4G27820 45.322 481 242 6 31 508 20 482 3.39e-144 424
MS.gene57806.t1 AT5G26000 47.609 460 228 7 1 455 5 456 4.89e-144 422
MS.gene57806.t1 AT1G02850 44.000 500 238 7 35 509 27 509 6.70e-144 424
MS.gene57806.t1 AT1G66270 45.963 483 249 8 31 508 33 508 8.32e-144 424
MS.gene57806.t1 AT3G60140 49.637 413 200 6 25 433 16 424 1.17e-143 421
MS.gene57806.t1 AT1G02850 44.112 501 237 8 35 509 27 510 1.87e-142 420
MS.gene57806.t1 AT2G44470 45.794 428 225 5 31 454 26 450 1.89e-142 418
MS.gene57806.t1 AT2G44480 60.000 315 124 2 30 344 62 374 1.62e-139 408
MS.gene57806.t1 AT2G44450 52.661 357 164 2 155 511 1 352 6.90e-139 405
MS.gene57806.t1 AT3G62750 43.000 500 250 9 14 508 4 473 2.49e-138 409
MS.gene57806.t1 AT3G62750 43.000 500 250 9 14 508 30 499 6.72e-138 409
MS.gene57806.t1 AT1G02850 44.235 477 220 7 35 509 27 459 1.41e-137 406
MS.gene57806.t1 AT1G60090 42.032 502 272 8 13 513 4 487 1.76e-136 404
MS.gene57806.t1 AT4G22100 42.430 502 267 9 16 513 4 487 1.93e-136 404
MS.gene57806.t1 AT1G60090 41.602 512 267 10 13 513 4 494 4.22e-135 401
MS.gene57806.t1 AT3G62740 40.954 503 259 10 10 508 10 478 5.53e-132 393
MS.gene57806.t1 AT1G45191 42.620 481 254 9 35 511 30 492 2.97e-130 389
MS.gene57806.t1 AT1G45191 42.975 484 253 10 35 511 30 497 7.41e-130 388
MS.gene57806.t1 AT1G45191 42.355 484 245 10 35 511 30 486 1.17e-129 387
MS.gene57806.t1 AT1G45191 42.713 494 252 11 35 511 30 509 8.78e-129 385
MS.gene57806.t1 AT1G52400 45.035 433 223 9 30 454 35 460 5.35e-127 379
MS.gene57806.t1 AT2G44470 47.788 339 173 3 31 367 26 362 9.36e-123 365
MS.gene57806.t1 AT1G61810 43.855 415 225 6 102 512 1 411 4.06e-122 365
MS.gene57806.t1 AT4G27830 45.122 410 208 5 102 508 1 396 7.21e-122 364
MS.gene57806.t1 AT1G02850 45.721 409 187 5 35 419 27 424 1.22e-121 364
MS.gene57806.t1 AT3G62750 42.188 448 225 8 14 457 30 447 3.81e-118 356
MS.gene57806.t1 AT1G61810 43.478 414 227 5 10 419 9 419 4.44e-118 354
MS.gene57806.t1 AT2G44460 50.139 361 172 6 153 508 1 358 5.25e-117 352
MS.gene57806.t1 AT4G27820 44.878 410 210 5 102 508 1 397 7.32e-117 351
MS.gene57806.t1 AT4G27820 44.878 410 210 5 102 508 1 397 7.32e-117 351
MS.gene57806.t1 AT3G18070 49.704 338 159 6 21 358 21 347 4.97e-116 348
MS.gene57806.t1 AT5G48375 39.014 487 221 8 20 501 24 439 1.07e-115 349
MS.gene57806.t1 AT3G62740 41.071 448 227 9 10 454 10 423 1.01e-114 346
MS.gene57806.t1 AT1G51490 48.851 348 163 6 41 386 27 361 1.12e-110 335
MS.gene57806.t1 AT1G60270 46.409 362 181 6 16 373 6 358 5.54e-110 332
MS.gene57806.t1 AT3G18070 49.550 333 161 5 180 510 94 421 2.83e-109 332
MS.gene57806.t1 AT3G18070 52.632 76 31 2 21 96 21 91 1.18e-16 82.8
MS.gene57806.t1 AT3G62750 46.784 342 165 5 14 355 4 328 6.80e-109 329
MS.gene57806.t1 AT3G62750 46.784 342 165 5 14 355 4 328 6.80e-109 329
MS.gene57806.t1 AT1G61820 44.687 367 196 5 148 510 4 367 1.80e-108 328
MS.gene57806.t1 AT3G62750 46.784 342 165 5 14 355 30 354 6.19e-108 329
MS.gene57806.t1 AT2G44480 49.518 311 156 1 207 517 2 311 3.20e-107 323
MS.gene57806.t1 AT3G62750 41.262 412 213 7 102 508 1 388 1.06e-106 325
MS.gene57806.t1 AT3G62750 41.262 412 213 7 102 508 1 388 1.06e-106 325
MS.gene57806.t1 AT1G45191 44.699 349 181 5 35 380 30 369 5.97e-104 318
MS.gene57806.t1 AT1G45191 42.784 388 196 8 35 416 30 397 2.12e-103 317
MS.gene57806.t1 AT3G18070 49.682 314 151 5 199 510 1 309 9.09e-103 311
MS.gene57806.t1 AT1G61810 48.136 295 149 3 10 303 9 300 3.16e-93 286
MS.gene57806.t1 AT1G60270 47.464 276 136 5 102 373 1 271 3.84e-81 255
MS.gene57806.t1 AT3G18070 45.267 243 129 3 180 420 94 334 9.22e-69 224
MS.gene57806.t1 AT3G18070 52.632 76 31 2 21 96 21 91 4.98e-17 82.8
MS.gene57806.t1 AT3G18070 45.089 224 119 3 199 420 1 222 2.08e-62 204
MS.gene57806.t1 AT5G16580 39.519 291 153 7 180 465 27 299 9.23e-52 178
MS.gene57806.t1 AT3G06510 26.835 436 228 15 97 517 159 518 2.12e-28 119
MS.gene57806.t1 AT3G06510 26.593 455 239 17 97 517 159 552 3.12e-28 119

Find 114 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTAAATGTTCTTCTTTC+TGG 0.049327 6.1:+69393121 MS.gene57806:CDS
AATATCAGCCATTTGGTTTA+AGG 0.097589 6.1:+69398513 MS.gene57806:CDS
TTGATCTATATCACTGAAAA+TGG 0.261422 6.1:+69397883 MS.gene57806:CDS
TGTTGTGATTCTTAACTCTT+TGG 0.264243 6.1:+69393147 MS.gene57806:CDS
TTGCTTACTTGGAAGTATTC+TGG 0.267931 6.1:-69394000 None:intergenic
GAGGAAGGTCCCAATGAAAA+AGG 0.297919 6.1:-69394887 None:intergenic
GCCACTCTATGATACAAAAT+TGG 0.298973 6.1:+69396074 MS.gene57806:CDS
AGAGCCATTGATTTCATGTT+TGG 0.306421 6.1:+69396114 MS.gene57806:CDS
TGATCAATACCATCGTTATA+AGG 0.309617 6.1:+69393736 MS.gene57806:CDS
TTGTAACTGTTCTATGTTGT+AGG 0.315056 6.1:-69398540 None:intergenic
TAACCTCATCAATGAGCTTC+TGG 0.326995 6.1:+69394768 MS.gene57806:CDS
ACATCTCAACAGGGCAAGAT+AGG 0.328217 6.1:+69396024 MS.gene57806:CDS
CATTGATTGACAACTTTGAA+TGG 0.334348 6.1:+69398419 MS.gene57806:CDS
CAAACTCTTGAAGAAGAATA+TGG 0.340474 6.1:+69394909 MS.gene57806:CDS
AACATCTTCATCTGCATATC+AGG 0.343664 6.1:+69393255 MS.gene57806:CDS
ATCTGTGATGTAGCTGGGTT+TGG 0.344206 6.1:-69396525 None:intergenic
GTGGCAAAGGACCAAGTATA+TGG 0.345591 6.1:+69393464 MS.gene57806:CDS
TGATTATGAGCCGCGATATA+GGG 0.348212 6.1:-69395228 None:intergenic
CAATCCTTTGTGTGTCTTCA+AGG 0.355425 6.1:-69398191 None:intergenic
ACATGCAGGCAGCTTCAAAA+TGG 0.356308 6.1:+69397794 MS.gene57806:intron
GACAACTTTGAATGGACTTC+AGG 0.356473 6.1:+69398427 MS.gene57806:CDS
TGTCTACAAAACTAAGTATC+AGG 0.359104 6.1:+69395278 MS.gene57806:CDS
GATTGGTGGAGGTGTAAATA+AGG 0.373123 6.1:+69394726 MS.gene57806:CDS
GAGGGATTTGCTAATATCAT+TGG 0.373239 6.1:-69393197 None:intergenic
TTGATTATGAGCCGCGATAT+AGG 0.376943 6.1:-69395229 None:intergenic
TAACTTTACAGGTAAGATAA+AGG 0.377900 6.1:+69393688 MS.gene57806:intron
TTAATTGCAGAAGGAAAGAT+TGG 0.380831 6.1:+69394709 MS.gene57806:intron
GATGTGAATTACACTATATT+AGG 0.385976 6.1:-69394945 None:intergenic
TCAGGCTACACTTCAAGGTT+TGG 0.387145 6.1:+69398445 MS.gene57806:CDS
AATGATGAAGGACATCAATA+TGG 0.390972 6.1:+69393950 MS.gene57806:CDS
ACTTGATATGTAGAAAACTT+TGG 0.393184 6.1:-69396416 None:intergenic
TTTATGGATCCATTGACAAT+AGG 0.394559 6.1:+69396350 MS.gene57806:CDS
GGACTTCAGGCTACACTTCA+AGG 0.395818 6.1:+69398440 MS.gene57806:CDS
GCACATACCGTTGGGCCAAT+AGG 0.402277 6.1:-69397644 None:intergenic
GGGTGCATTAGTTGCATAAT+GGG 0.404463 6.1:-69396489 None:intergenic
AATCGACAAATTTAGTATGA+AGG 0.412084 6.1:+69393427 MS.gene57806:intron
TATCAAGTAAAGCTTGTAAG+AGG 0.412431 6.1:+69396431 MS.gene57806:CDS
GTGTACACAGACATCTCAAC+AGG 0.414741 6.1:+69396014 MS.gene57806:intron
CGGGTGCATTAGTTGCATAA+TGG 0.417931 6.1:-69396490 None:intergenic
TGGGAAATTACTTCGATTGA+GGG 0.422951 6.1:-69393215 None:intergenic
TATTCTTCTTCAAGAGTTTG+AGG 0.425331 6.1:-69394906 None:intergenic
GGGTTTGGCTTCACTTAACT+CGG 0.442075 6.1:-69396510 None:intergenic
TTTCAGTGATATAGATCAAC+GGG 0.447228 6.1:-69397879 None:intergenic
AGCTCCATGCGGTCCTTGGT+AGG 0.451981 6.1:+69396383 MS.gene57806:CDS
CCCTAGCTCCATGCGGTCCT+TGG 0.454487 6.1:+69396379 MS.gene57806:CDS
TAGGAAATCCTTAAACCAAA+TGG 0.458885 6.1:-69398521 None:intergenic
GTGGGAAATTACTTCGATTG+AGG 0.468623 6.1:-69393216 None:intergenic
TCCATCAGCATAAGCATGCT+TGG 0.472004 6.1:-69395136 None:intergenic
AAGCGCAATGGAATACCTAT+TGG 0.478134 6.1:+69397629 MS.gene57806:CDS
CAAAGGATTGATTACTATCA+TGG 0.481431 6.1:+69398204 MS.gene57806:CDS
CATCAATGAGCTTCTGGCCA+AGG 0.482325 6.1:+69394774 MS.gene57806:CDS
AATCCTTTGTGTGTCTTCAA+GGG 0.484608 6.1:-69398190 None:intergenic
TGGTTATCAATTTATCCAAA+GGG 0.494731 6.1:+69397814 MS.gene57806:CDS
AAGATAAAGGACAAAAGTAA+TGG 0.495706 6.1:+69393701 MS.gene57806:CDS
TGGTCCTTTGCCACCAACAT+TGG 0.500603 6.1:-69393455 None:intergenic
AAGTGAATCTGTGATGTAGC+TGG 0.501010 6.1:-69396531 None:intergenic
GGGTAGTCTCCTATTGTCAA+TGG 0.501063 6.1:-69396359 None:intergenic
AATAGGTCATGAATTCCCTT+TGG 0.502202 6.1:-69397829 None:intergenic
GCAGCCAATGTTGGTGGCAA+AGG 0.506097 6.1:+69393451 MS.gene57806:CDS
CCATCCAAACATGAAATCAA+TGG 0.508555 6.1:-69396118 None:intergenic
ATGGTTATCAATTTATCCAA+AGG 0.512637 6.1:+69397813 MS.gene57806:CDS
GCCAAGCATGCTTATGCTGA+TGG 0.514658 6.1:+69395135 MS.gene57806:CDS
ATAACGATGGTATTGATCAA+TGG 0.515743 6.1:-69393732 None:intergenic
ACCAAGGACCGCATGGAGCT+AGG 0.516896 6.1:-69396380 None:intergenic
GGGATGGTGCGAATGTGAAC+GGG 0.519031 6.1:+69398383 MS.gene57806:intron
ACTTTCACACATAATTATCC+AGG 0.520794 6.1:+69393490 MS.gene57806:CDS
CCAAGGACCGCATGGAGCTA+GGG 0.523458 6.1:-69396379 None:intergenic
CCATTGATTTCATGTTTGGA+TGG 0.528755 6.1:+69396118 MS.gene57806:CDS
GCTTTCTCAAGAGGGAGTGT+TGG 0.529097 6.1:-69398168 None:intergenic
TTCAGTGGCGGAATCTCCAC+CGG 0.537381 6.1:-69395205 None:intergenic
ATTGCAGAAGGAAAGATTGG+TGG 0.538980 6.1:+69394712 MS.gene57806:intron
TTGGAGATAGAGTAAAGCAT+TGG 0.540163 6.1:+69395085 MS.gene57806:CDS
AGGGATGGTGCGAATGTGAA+CGG 0.547980 6.1:+69398382 MS.gene57806:intron
TGCCAGGGTGAACATCGACC+AGG 0.548000 6.1:-69395168 None:intergenic
CTTCTTCAAGAGTTTGAGGA+AGG 0.549021 6.1:-69394902 None:intergenic
TGGCAAAGGACCAAGTATAT+GGG 0.550285 6.1:+69393465 MS.gene57806:CDS
GCTCCATGCGGTCCTTGGTA+GGG 0.552456 6.1:+69396384 MS.gene57806:CDS
CTTCAAGGGCTTTCTCAAGA+GGG 0.553607 6.1:-69398176 None:intergenic
CATCTCAACAGGGCAAGATA+GGG 0.554782 6.1:+69396025 MS.gene57806:CDS
TCTTCAAGGGCTTTCTCAAG+AGG 0.557439 6.1:-69398177 None:intergenic
GCAGAAGGAAAGATTGGTGG+AGG 0.557751 6.1:+69394715 MS.gene57806:intron
AAGTATTCTGGACCAAGAGA+TGG 0.559511 6.1:-69393988 None:intergenic
ATCAATGAGCTTCTGGCCAA+GGG 0.562187 6.1:+69394775 MS.gene57806:CDS
GGTTTGGCTTCACTTAACTC+GGG 0.563688 6.1:-69396509 None:intergenic
GGTGGAGGTGTAAATAAGGA+AGG 0.565682 6.1:+69394730 MS.gene57806:CDS
TGGCAAAACTTGAATTGCAC+CGG 0.571341 6.1:+69395186 MS.gene57806:CDS
GTGAAAGTATCCCATATACT+TGG 0.571422 6.1:-69393475 None:intergenic
GTTTAATCCAATAAAATCAA+AGG 0.577644 6.1:-69396456 None:intergenic
ATGTGAACGGGTACTTTGCA+TGG 0.582215 6.1:+69398395 MS.gene57806:CDS
GCATGCTTGGCAAAGCTCCA+TGG 0.583054 6.1:-69395123 None:intergenic
AACATTAATGTGTCAGTGGA+TGG 0.588696 6.1:+69396050 MS.gene57806:CDS
GGAAGATGTTGAAATGATGA+AGG 0.589403 6.1:+69393938 MS.gene57806:intron
CACCTGGTCGATGTTCACCC+TGG 0.589434 6.1:+69395166 MS.gene57806:CDS
ACTCCCTACCAAGGACCGCA+TGG 0.592541 6.1:-69396387 None:intergenic
AATCGAAGTAATTTCCCACA+AGG 0.607295 6.1:+69393220 MS.gene57806:CDS
GAAGGTGCAGCCAATGTTGG+TGG 0.614271 6.1:+69393445 MS.gene57806:CDS
TGGAATACCTATTGGCCCAA+CGG 0.614932 6.1:+69397637 MS.gene57806:CDS
AGTATTGAACCTTATAACGA+TGG 0.618495 6.1:-69393745 None:intergenic
TATGAAGGTGCAGCCAATGT+TGG 0.618565 6.1:+69393442 MS.gene57806:CDS
CAAAACTTGAATTGCACCGG+TGG 0.620786 6.1:+69395189 MS.gene57806:CDS
TGGCCAGAAGCTCATTGATG+AGG 0.621990 6.1:-69394771 None:intergenic
ATCAAGTAAAGCTTGTAAGA+GGG 0.625020 6.1:+69396432 MS.gene57806:CDS
GGATAACATTAATGTGTCAG+TGG 0.627418 6.1:+69396046 MS.gene57806:CDS
GCTGATGGAAAGTTAGCACC+TGG 0.627941 6.1:+69395150 MS.gene57806:CDS
AGTGAATCTGTGATGTAGCT+GGG 0.637641 6.1:-69396530 None:intergenic
ACTCTTGAAGAAGAATATGG+TGG 0.648422 6.1:+69394912 MS.gene57806:CDS
GGATCACATTGAATGAACCA+TGG 0.651187 6.1:+69395106 MS.gene57806:CDS
CGCGATATAGGGTTCAGTGG+CGG 0.664027 6.1:-69395217 None:intergenic
AGCCGCGATATAGGGTTCAG+TGG 0.679947 6.1:-69395220 None:intergenic
AAGCCCTTGAAGACACACAA+AGG 0.680808 6.1:+69398187 MS.gene57806:CDS
CGCCACTGAACCCTATATCG+CGG 0.707233 6.1:+69395218 MS.gene57806:CDS
TGGTAATCTACTCCCTACCA+AGG 0.720145 6.1:-69396396 None:intergenic
TGTACACAGACATCTCAACA+GGG 0.744686 6.1:+69396015 MS.gene57806:intron
GAGACTACCCTAGCTCCATG+CGG 0.758435 6.1:+69396372 MS.gene57806:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATATTATAAATTTAT+AGG - chr6.1:69394670-69394689 None:intergenic 0.0%
!! ATTAATATTATAAATTTATA+GGG - chr6.1:69394669-69394688 None:intergenic 0.0%
!! AATTAAAATGTAAAAACATT+AGG - chr6.1:69397689-69397708 None:intergenic 10.0%
!! ATAATAATTGTTCAAAAAAA+AGG + chr6.1:69393853-69393872 MS.gene57806:intron 10.0%
!! TAAAAGAATATTGAAATATT+TGG - chr6.1:69393285-69393304 None:intergenic 10.0%
!! TACTGTATTATTAATATTAA+TGG - chr6.1:69396595-69396614 None:intergenic 10.0%
!! TATATTGTGAATTTATATAT+AGG + chr6.1:69398126-69398145 MS.gene57806:intron 10.0%
!!! ACTTTTTTTTAAAAATAGTA+AGG - chr6.1:69394617-69394636 None:intergenic 10.0%
!!! GTTTTCATTTTATATTTTTT+TGG + chr6.1:69397740-69397759 MS.gene57806:intron 10.0%
!! AACAATATCTTTGTAAATTA+TGG + chr6.1:69398302-69398321 MS.gene57806:intron 15.0%
!! ATCAACAAAAAATAAAAAAG+AGG - chr6.1:69393523-69393542 None:intergenic 15.0%
!! TACATAAATGAAAAAAGTAA+TGG - chr6.1:69393610-69393629 None:intergenic 15.0%
!! TATATATGATAGTATATGAT+AGG + chr6.1:69395455-69395474 MS.gene57806:intron 15.0%
!!! AATTTTATCCAAATTTTACA+AGG + chr6.1:69398362-69398381 MS.gene57806:intron 15.0%
!!! AGTTACATTATTTTATGTTT+AGG - chr6.1:69396237-69396256 None:intergenic 15.0%
!!! ATTTTATCCAAATTTTACAA+GGG + chr6.1:69398363-69398382 MS.gene57806:intron 15.0%
!!! ATTTTTTAAGGAGTTTATTT+TGG - chr6.1:69395854-69395873 None:intergenic 15.0%
!!! CTTTTTAAAAAATGTATTGT+AGG + chr6.1:69396327-69396346 MS.gene57806:intron 15.0%
!!! TTTTTTAAGGAGTTTATTTT+GGG - chr6.1:69395853-69395872 None:intergenic 15.0%
!!! TTTTTTTTATTACAATTGCA+TGG + chr6.1:69394207-69394226 MS.gene57806:intron 15.0%
!! AAAAATGTATTGTAGGTTTA+TGG + chr6.1:69396334-69396353 MS.gene57806:intron 20.0%
!! AAAGTACAATAAAAGAATCT+AGG + chr6.1:69396982-69397001 MS.gene57806:intron 20.0%
!! AAGTACAATAAAAGAATCTA+GGG + chr6.1:69396983-69397002 MS.gene57806:intron 20.0%
!! ATATAATGCTTATTTCAGTT+AGG + chr6.1:69397718-69397737 MS.gene57806:intron 20.0%
!! GTTTAATCCAATAAAATCAA+AGG - chr6.1:69396459-69396478 None:intergenic 20.0%
!! GTTTATACTCAAATTTAGAT+AGG + chr6.1:69397972-69397991 MS.gene57806:intron 20.0%
!! TAATCAAATATCATGAAGTT+AGG + chr6.1:69394983-69395002 MS.gene57806:intron 20.0%
!! TACACAAAGTAAAGAAAATA+AGG - chr6.1:69395999-69396018 None:intergenic 20.0%
!! TCATGATATTTGATTATCTT+TGG - chr6.1:69394979-69394998 None:intergenic 20.0%
!! TGAGTTTCACATATAATTTA+TGG - chr6.1:69396163-69396182 None:intergenic 20.0%
!!! AACATTAACCACTTATTTTA+TGG - chr6.1:69396800-69396819 None:intergenic 20.0%
!!! AAGACATTAAACTCTTTTAA+AGG + chr6.1:69396206-69396225 MS.gene57806:intron 20.0%
!!! ACATTAACCACTTATTTTAT+GGG - chr6.1:69396799-69396818 None:intergenic 20.0%
!!! AGCATTTTCCATTAATAAAT+TGG + chr6.1:69394465-69394484 MS.gene57806:intron 20.0%
!!! ATAATTTTTAACTAGCTAGT+AGG + chr6.1:69397479-69397498 MS.gene57806:intron 20.0%
!!! ATATTTTTGGATATCTTTTG+AGG - chr6.1:69398498-69398517 None:intergenic 20.0%
!!! CTTTGAGAATTTTTTTGAAT+CGG + chr6.1:69397026-69397045 MS.gene57806:intron 20.0%
!!! GAACTTTGTTTTAAAGAATT+TGG + chr6.1:69395066-69395085 MS.gene57806:CDS 20.0%
!!! GTATATGTTTTATGTTTTCA+TGG + chr6.1:69396842-69396861 MS.gene57806:intron 20.0%
!!! TAGCATTTTCCTAAAAAAAA+AGG + chr6.1:69394102-69394121 MS.gene57806:intron 20.0%
!!! TAGCATTTTCCTTTTTTTTT+AGG - chr6.1:69394114-69394133 None:intergenic 20.0%
!!! TCTTCAATGGTTATTTTTTA+AGG - chr6.1:69395866-69395885 None:intergenic 20.0%
!!! TCTTTCAATCTATTTCTTTA+AGG + chr6.1:69397931-69397950 MS.gene57806:intron 20.0%
!!! TTATTTTAATGTAGAGCAAT+AGG - chr6.1:69397849-69397868 None:intergenic 20.0%
!!! TTTTGCAAGTACAAAAATAA+TGG - chr6.1:69396965-69396984 None:intergenic 20.0%
! AAATGAAGAAGAAGTTCATA+TGG - chr6.1:69394806-69394825 None:intergenic 25.0%
! AACATGCTCCAATTTATTAA+TGG - chr6.1:69394476-69394495 None:intergenic 25.0%
! AAGATAAAGGACAAAAGTAA+TGG + chr6.1:69393701-69393720 MS.gene57806:CDS 25.0%
! AATAACAAAAACAATGATGC+TGG + chr6.1:69393884-69393903 MS.gene57806:intron 25.0%
! AATCGACAAATTTAGTATGA+AGG + chr6.1:69393427-69393446 MS.gene57806:intron 25.0%
! ACTTGATATGTAGAAAACTT+TGG - chr6.1:69396419-69396438 None:intergenic 25.0%
! AGACATTTCTGATATAATGT+AGG + chr6.1:69393917-69393936 MS.gene57806:intron 25.0%
! AGATTGAAAGAAAATCTAGT+TGG - chr6.1:69397922-69397941 None:intergenic 25.0%
! AGTTAAGCAACAAAATTTGT+TGG - chr6.1:69393673-69393692 None:intergenic 25.0%
! ATAATTATGTGAGTTAGATC+CGG - chr6.1:69393587-69393606 None:intergenic 25.0%
! ATGGTTATCAATTTATCCAA+AGG + chr6.1:69397813-69397832 MS.gene57806:CDS 25.0%
! ATTCCTTTATTAATTGCAGA+AGG + chr6.1:69394700-69394719 MS.gene57806:intron 25.0%
! GATGAAGAAATACATAGTAT+TGG - chr6.1:69395949-69395968 None:intergenic 25.0%
! GATGTGAATTACACTATATT+AGG - chr6.1:69394948-69394967 None:intergenic 25.0%
! TAAAAAAGAGGAAAAATACC+TGG - chr6.1:69393511-69393530 None:intergenic 25.0%
! TAACTTTACAGGTAAGATAA+AGG + chr6.1:69393688-69393707 MS.gene57806:intron 25.0%
! TATAAACCAATGCTTAACTT+TGG - chr6.1:69397959-69397978 None:intergenic 25.0%
! TGGTTATCAATTTATCCAAA+GGG + chr6.1:69397814-69397833 MS.gene57806:CDS 25.0%
! TGTGAATTTATATATAGGCA+TGG + chr6.1:69398131-69398150 MS.gene57806:intron 25.0%
! TTCCAAAAATAAAACCTTGT+GGG - chr6.1:69393237-69393256 None:intergenic 25.0%
! TTGATCTATATCACTGAAAA+TGG + chr6.1:69397883-69397902 MS.gene57806:CDS 25.0%
! TTGATTATCTTTGGTCATAT+GGG - chr6.1:69394970-69394989 None:intergenic 25.0%
! TTTCCTTCTGCAATTAATAA+AGG - chr6.1:69394706-69394725 None:intergenic 25.0%
! TTTGATTATCTTTGGTCATA+TGG - chr6.1:69394971-69394990 None:intergenic 25.0%
!! AAAGAATAGCCTTAATTAAG+TGG - chr6.1:69395907-69395926 None:intergenic 25.0%
!! AATTTATAGGGTGTCTAATA+TGG - chr6.1:69394657-69394676 None:intergenic 25.0%
!! AATTTTTATGCTAACCACTT+TGG - chr6.1:69395617-69395636 None:intergenic 25.0%
!! ACTCTTTTATTAGATGCAAA+TGG - chr6.1:69398060-69398079 None:intergenic 25.0%
!! GTTAATGTTTTACGTTTTGA+TGG + chr6.1:69396811-69396830 MS.gene57806:intron 25.0%
!! TAAAAATTGTTTCTTAGTCC+TGG - chr6.1:69394033-69394052 None:intergenic 25.0%
!! TAAGGTATCAATAGTCAATA+TGG - chr6.1:69395981-69396000 None:intergenic 25.0%
!! TTAATTTTCCAATCCATTGA+AGG + chr6.1:69395580-69395599 MS.gene57806:intron 25.0%
!! TTTATGTTTTCATGGTTAGT+GGG + chr6.1:69396850-69396869 MS.gene57806:intron 25.0%
!! TTTTATGTTTTCATGGTTAG+TGG + chr6.1:69396849-69396868 MS.gene57806:intron 25.0%
!! TTTTCAGTGATATAGATCAA+CGG - chr6.1:69397883-69397902 None:intergenic 25.0%
!!! ATTTTGTTGCTTAACTTTAC+AGG + chr6.1:69393677-69393696 MS.gene57806:intron 25.0%
!!! GGGTTATAAATACCATTTTT+TGG - chr6.1:69397132-69397151 None:intergenic 25.0%
!!! GTTAATATCATCCATTTTTG+TGG + chr6.1:69396912-69396931 MS.gene57806:intron 25.0%
AAACACTTTATAAGTGAGAG+AGG + chr6.1:69396772-69396791 MS.gene57806:intron 30.0%
AAATATGTATGAGTTGCATC+AGG + chr6.1:69395785-69395804 MS.gene57806:intron 30.0%
AATGATGAAGGACATCAATA+TGG + chr6.1:69393950-69393969 MS.gene57806:CDS 30.0%
ACACACAAGTTATAACATCA+TGG - chr6.1:69393787-69393806 None:intergenic 30.0%
ACTTTCACACATAATTATCC+AGG + chr6.1:69393490-69393509 MS.gene57806:CDS 30.0%
ATCAAGTAAAGCTTGTAAGA+GGG + chr6.1:69396432-69396451 MS.gene57806:CDS 30.0%
ATCAATTGCTATGTCAATGT+AGG + chr6.1:69394846-69394865 MS.gene57806:intron 30.0%
ATCCAAAAATATCAGCCATT+TGG + chr6.1:69398506-69398525 MS.gene57806:CDS 30.0%
ATTAAACTCCTTCAATGGAT+TGG - chr6.1:69395591-69395610 None:intergenic 30.0%
CAAACTCTTGAAGAAGAATA+TGG + chr6.1:69394909-69394928 MS.gene57806:CDS 30.0%
CAAAGGATTGATTACTATCA+TGG + chr6.1:69398204-69398223 MS.gene57806:CDS 30.0%
CTCTAACTATGATTATATCC+AGG + chr6.1:69395022-69395041 MS.gene57806:intron 30.0%
CTGGATATAATCATAGTTAG+AGG - chr6.1:69395024-69395043 None:intergenic 30.0%
CTTGAGAATGATCCAAAAAA+TGG + chr6.1:69397117-69397136 MS.gene57806:intron 30.0%
GTTCCAAAAATAAAACCTTG+TGG - chr6.1:69393238-69393257 None:intergenic 30.0%
TACACCATTAACCACAAAAA+TGG - chr6.1:69396926-69396945 None:intergenic 30.0%
TAGGAAATCCTTAAACCAAA+TGG - chr6.1:69398524-69398543 None:intergenic 30.0%
TATCAAGTAAAGCTTGTAAG+AGG + chr6.1:69396431-69396450 MS.gene57806:CDS 30.0%
TATTCTTCTTCAAGAGTTTG+AGG - chr6.1:69394909-69394928 None:intergenic 30.0%
TGATCAATACCATCGTTATA+AGG + chr6.1:69393736-69393755 MS.gene57806:CDS 30.0%
TGTCTACAAAACTAAGTATC+AGG + chr6.1:69395278-69395297 MS.gene57806:CDS 30.0%
TGTTGTGATTCTTAACTCTT+TGG + chr6.1:69393147-69393166 MS.gene57806:CDS 30.0%
TTAATTGCAGAAGGAAAGAT+TGG + chr6.1:69394709-69394728 MS.gene57806:intron 30.0%
TTGTAACTGTTCTATGTTGT+AGG - chr6.1:69398543-69398562 None:intergenic 30.0%
TTTATGGATCCATTGACAAT+AGG + chr6.1:69396350-69396369 MS.gene57806:CDS 30.0%
TTTCAGTGATATAGATCAAC+GGG - chr6.1:69397882-69397901 None:intergenic 30.0%
! AACCAAATGGCTGATATTTT+TGG - chr6.1:69398511-69398530 None:intergenic 30.0%
! AATAGCCTTAATTAAGTGGT+TGG - chr6.1:69395903-69395922 None:intergenic 30.0%
! AATATCAGCCATTTGGTTTA+AGG + chr6.1:69398513-69398532 MS.gene57806:CDS 30.0%
! AGAGTGTTTAGATATAGAGA+CGG + chr6.1:69398075-69398094 MS.gene57806:intron 30.0%
! AGTATTGAACCTTATAACGA+TGG - chr6.1:69393748-69393767 None:intergenic 30.0%
! CATTGATTGACAACTTTGAA+TGG + chr6.1:69398419-69398438 MS.gene57806:CDS 30.0%
! TATCCAAATTTTACAAGGGA+TGG + chr6.1:69398367-69398386 MS.gene57806:intron 30.0%
! TCCAATTTTGTATCATAGAG+TGG - chr6.1:69396078-69396097 None:intergenic 30.0%
! TTATGTTTTCATGGTTAGTG+GGG + chr6.1:69396851-69396870 MS.gene57806:intron 30.0%
!! AGAATTTTTGAAGACACATG+TGG - chr6.1:69394422-69394441 None:intergenic 30.0%
!! ATAACGATGGTATTGATCAA+TGG - chr6.1:69393735-69393754 None:intergenic 30.0%
!! ATAGACTTCTAGAAGCTTTT+AGG + chr6.1:69397211-69397230 MS.gene57806:intron 30.0%
!! ATTTTTAACTAGCTAGTAGG+AGG + chr6.1:69397482-69397501 MS.gene57806:intron 30.0%
!! TCATCCATTTTTGTGGTTAA+TGG + chr6.1:69396919-69396938 MS.gene57806:intron 30.0%
!! TTACGTTTTGATGGTTAGTA+GGG + chr6.1:69396820-69396839 MS.gene57806:intron 30.0%
!! TTTACGTTTTGATGGTTAGT+AGG + chr6.1:69396819-69396838 MS.gene57806:intron 30.0%
!!! CATTTTTTGGATCATTCTCA+AGG - chr6.1:69397119-69397138 None:intergenic 30.0%
!!! GTGCAAAGATTTTAGTTTGA+GGG - chr6.1:69398267-69398286 None:intergenic 30.0%
!!! TTCCCACAAGGTTTTATTTT+TGG + chr6.1:69393232-69393251 MS.gene57806:CDS 30.0%
AACATCTTCATCTGCATATC+AGG + chr6.1:69393255-69393274 MS.gene57806:CDS 35.0%
AACATTAATGTGTCAGTGGA+TGG + chr6.1:69396050-69396069 MS.gene57806:CDS 35.0%
AATACTTCCAAGTAAGCAAC+GGG + chr6.1:69394004-69394023 MS.gene57806:intron 35.0%
AATAGCTAGCCAAAGCATAA+AGG - chr6.1:69395424-69395443 None:intergenic 35.0%
AATAGGTCATGAATTCCCTT+TGG - chr6.1:69397832-69397851 None:intergenic 35.0%
AATCCTTTGTGTGTCTTCAA+GGG - chr6.1:69398193-69398212 None:intergenic 35.0%
AATCGAAGTAATTTCCCACA+AGG + chr6.1:69393220-69393239 MS.gene57806:CDS 35.0%
ACTCTTGAAGAAGAATATGG+TGG + chr6.1:69394912-69394931 MS.gene57806:CDS 35.0%
AGCTAGTAGGAGGAAAATTT+GGG + chr6.1:69397492-69397511 MS.gene57806:intron 35.0%
AGTTCATATGGTATTACCCT+TGG - chr6.1:69394794-69394813 None:intergenic 35.0%
ATAGCTAGCCAAAGCATAAA+GGG - chr6.1:69395423-69395442 None:intergenic 35.0%
ATGGTATTTATAACCCTCTG+TGG + chr6.1:69397136-69397155 MS.gene57806:intron 35.0%
CAAAAACAAATGGCAAGGTA+GGG + chr6.1:69395374-69395393 MS.gene57806:intron 35.0%
CAATGAAAAAGGGTCACAAA+GGG - chr6.1:69394879-69394898 None:intergenic 35.0%
CCATCCAAACATGAAATCAA+TGG - chr6.1:69396121-69396140 None:intergenic 35.0%
CTCAACCTTGCAAAAACAAA+TGG + chr6.1:69395364-69395383 MS.gene57806:intron 35.0%
GAAATGTTAATCGATACCTC+CGG - chr6.1:69396308-69396327 None:intergenic 35.0%
GAATACTTCCAAGTAAGCAA+CGG + chr6.1:69394003-69394022 MS.gene57806:intron 35.0%
GCACTAAATGTTCTTCTTTC+TGG + chr6.1:69393121-69393140 MS.gene57806:CDS 35.0%
GCCACTCTATGATACAAAAT+TGG + chr6.1:69396074-69396093 MS.gene57806:CDS 35.0%
GGAAGATGTTGAAATGATGA+AGG + chr6.1:69393938-69393957 MS.gene57806:intron 35.0%
GGATAACATTAATGTGTCAG+TGG + chr6.1:69396046-69396065 MS.gene57806:CDS 35.0%
TAACGCGAAAACCTTTATCA+CGG - chr6.1:69394514-69394533 None:intergenic 35.0%
TAGCTAGTAGGAGGAAAATT+TGG + chr6.1:69397491-69397510 MS.gene57806:intron 35.0%
TCTCACATTGGATAGAAAAG+TGG + chr6.1:69396744-69396763 MS.gene57806:intron 35.0%
TGCTTACATACAGGAACATA+GGG - chr6.1:69398037-69398056 None:intergenic 35.0%
TGGGAAATTACTTCGATTGA+GGG - chr6.1:69393218-69393237 None:intergenic 35.0%
TGTGACTGAAAAATAGGAAG+TGG + chr6.1:69394369-69394388 MS.gene57806:intron 35.0%
TGTTTAGATATAGAGACGGA+GGG + chr6.1:69398079-69398098 MS.gene57806:intron 35.0%
TTGGACTTCGTTGACATAAA+AGG + chr6.1:69397759-69397778 MS.gene57806:intron 35.0%
TTGGAGATAGAGTAAAGCAT+TGG + chr6.1:69395085-69395104 MS.gene57806:CDS 35.0%
TTGGGTGAACATATGAGTAT+GGG + chr6.1:69397510-69397529 MS.gene57806:intron 35.0%
TTTCATTTATGATGAGCCAC+CGG + chr6.1:69393565-69393584 MS.gene57806:intron 35.0%
TTTGGGTGAACATATGAGTA+TGG + chr6.1:69397509-69397528 MS.gene57806:intron 35.0%
! CGTATAGATTTTCCATCTCT+TGG + chr6.1:69393976-69393995 MS.gene57806:CDS 35.0%
! GCTAGCATTTATTGATTGCA+TGG + chr6.1:69394178-69394197 MS.gene57806:intron 35.0%
! TCTTGCTGTGTGTTAAACTA+AGG - chr6.1:69396625-69396644 None:intergenic 35.0%
!! AGAGCCATTGATTTCATGTT+TGG + chr6.1:69396114-69396133 MS.gene57806:CDS 35.0%
!! AGAGGGTCCTTTGATTTTAT+TGG + chr6.1:69396449-69396468 MS.gene57806:CDS 35.0%
!! CCATTGATTTCATGTTTGGA+TGG + chr6.1:69396118-69396137 MS.gene57806:CDS 35.0%
!! CTTTGTGACCCTTTTTCATT+GGG + chr6.1:69394878-69394897 MS.gene57806:CDS 35.0%
!! GAGGGATTTGCTAATATCAT+TGG - chr6.1:69393200-69393219 None:intergenic 35.0%
!! GTGAAAGTATCCCATATACT+TGG - chr6.1:69393478-69393497 None:intergenic 35.0%
!! TTGCTTACTTGGAAGTATTC+TGG - chr6.1:69394003-69394022 None:intergenic 35.0%
!!! GGTGCAAAGATTTTAGTTTG+AGG - chr6.1:69398268-69398287 None:intergenic 35.0%
!!! TTTTTTACAGACAAGCGCAA+TGG + chr6.1:69397617-69397636 MS.gene57806:intron 35.0%
AACCATTGAAGACGCTCTAA+GGG + chr6.1:69395874-69395893 MS.gene57806:intron 40.0%
AACCGTCAATCTACTCCTAA+GGG - chr6.1:69397347-69397366 None:intergenic 40.0%
AAGCAAAAACAAGTCCACAG+AGG - chr6.1:69397153-69397172 None:intergenic 40.0%
AAGCGCAATGGAATACCTAT+TGG + chr6.1:69397629-69397648 MS.gene57806:CDS 40.0%
AAGTATTCTGGACCAAGAGA+TGG - chr6.1:69393991-69394010 None:intergenic 40.0%
AAGTGAATCTGTGATGTAGC+TGG - chr6.1:69396534-69396553 None:intergenic 40.0%
AATACGTCCCCTTTATGCTT+TGG + chr6.1:69395412-69395431 MS.gene57806:intron 40.0%
AATTATCACGCACATACCGT+TGG - chr6.1:69397656-69397675 None:intergenic 40.0%
AGCAAAAACAAGTCCACAGA+GGG - chr6.1:69397152-69397171 None:intergenic 40.0%
AGCTGTGTCAAGAAATGCTA+GGG + chr6.1:69394059-69394078 MS.gene57806:intron 40.0%
AGGAAGGTCCCAATGAAAAA+GGG - chr6.1:69394889-69394908 None:intergenic 40.0%
AGGAGTTTAATGTGCCAAAG+TGG + chr6.1:69395600-69395619 MS.gene57806:intron 40.0%
AGTGAATCTGTGATGTAGCT+GGG - chr6.1:69396533-69396552 None:intergenic 40.0%
ATTATCACGCACATACCGTT+GGG - chr6.1:69397655-69397674 None:intergenic 40.0%
ATTATGTGAGTTAGATCCGG+TGG - chr6.1:69393584-69393603 None:intergenic 40.0%
ATTGCAGAAGGAAAGATTGG+TGG + chr6.1:69394712-69394731 MS.gene57806:intron 40.0%
CAATCCTTTGTGTGTCTTCA+AGG - chr6.1:69398194-69398213 None:intergenic 40.0%
CACATTGGATAGAAAAGTGG+AGG + chr6.1:69396747-69396766 MS.gene57806:intron 40.0%
CCAATGAAAAAGGGTCACAA+AGG - chr6.1:69394880-69394899 None:intergenic 40.0%
CCTTGCAAAAACAAATGGCA+AGG + chr6.1:69395369-69395388 MS.gene57806:intron 40.0%
CTTCTTCAAGAGTTTGAGGA+AGG - chr6.1:69394905-69394924 None:intergenic 40.0%
GAGAGGACCCATAAAATAAG+TGG + chr6.1:69396789-69396808 MS.gene57806:intron 40.0%
GCAAAAACAAATGGCAAGGT+AGG + chr6.1:69395373-69395392 MS.gene57806:intron 40.0%
GCACCATCCCTTGTAAAATT+TGG - chr6.1:69398373-69398392 None:intergenic 40.0%
GCGAGTAATAAGTCTCACAT+TGG + chr6.1:69396732-69396751 MS.gene57806:intron 40.0%
GGAACCTATATTACACATGC+AGG + chr6.1:69397780-69397799 MS.gene57806:intron 40.0%
GGATCACATTGAATGAACCA+TGG + chr6.1:69395106-69395125 MS.gene57806:CDS 40.0%
GGCACATTAAACTCCTTCAA+TGG - chr6.1:69395596-69395615 None:intergenic 40.0%
GGGTGCATTAGTTGCATAAT+GGG - chr6.1:69396492-69396511 None:intergenic 40.0%
GGTTGCCAACCACTTAATTA+AGG + chr6.1:69395895-69395914 MS.gene57806:intron 40.0%
GTGCTTACATACAGGAACAT+AGG - chr6.1:69398038-69398057 None:intergenic 40.0%
GTGGGAAATTACTTCGATTG+AGG - chr6.1:69393219-69393238 None:intergenic 40.0%
GTGTTTAGATATAGAGACGG+AGG + chr6.1:69398078-69398097 MS.gene57806:intron 40.0%
TAACCATTGAAGACGCTCTA+AGG + chr6.1:69395873-69395892 MS.gene57806:intron 40.0%
TAACCTCATCAATGAGCTTC+TGG + chr6.1:69394768-69394787 MS.gene57806:CDS 40.0%
TAGCTAGCCAAAGCATAAAG+GGG - chr6.1:69395422-69395441 None:intergenic 40.0%
TGATTATGAGCCGCGATATA+GGG - chr6.1:69395231-69395250 None:intergenic 40.0%
TGCAAATGGTGCTTACATAC+AGG - chr6.1:69398046-69398065 None:intergenic 40.0%
TGGCAAAACTTGAATTGCAC+CGG + chr6.1:69395186-69395205 MS.gene57806:CDS 40.0%
TGGCAAAGGACCAAGTATAT+GGG + chr6.1:69393465-69393484 MS.gene57806:CDS 40.0%
TGTACACAGACATCTCAACA+GGG + chr6.1:69396015-69396034 MS.gene57806:intron 40.0%
TTGATTATGAGCCGCGATAT+AGG - chr6.1:69395232-69395251 None:intergenic 40.0%
! AAGGTGCCAAAGTTAAGCAT+TGG + chr6.1:69397950-69397969 MS.gene57806:intron 40.0%
! ACTTAAAGCACAGCTTGCTT+AGG - chr6.1:69397185-69397204 None:intergenic 40.0%
! AGGAGGTGTGACTGAAAAAT+AGG + chr6.1:69394363-69394382 MS.gene57806:intron 40.0%
! ATAGTCTTGAAAGTCGTTCC+TGG - chr6.1:69395043-69395062 None:intergenic 40.0%
! CTTAAAGCACAGCTTGCTTA+GGG - chr6.1:69397184-69397203 None:intergenic 40.0%
! GACAACTTTGAATGGACTTC+AGG + chr6.1:69398427-69398446 MS.gene57806:CDS 40.0%
! GATTGGTGGAGGTGTAAATA+AGG + chr6.1:69394726-69394745 MS.gene57806:CDS 40.0%
!! AAGCTTTTAGGAGACTGTTG+AGG + chr6.1:69397223-69397242 MS.gene57806:intron 40.0%
!! CCTTTGTGACCCTTTTTCAT+TGG + chr6.1:69394877-69394896 MS.gene57806:CDS 40.0%
!! GTGCAATTCAAGTTTTGCCA+GGG - chr6.1:69395186-69395205 None:intergenic 40.0%
!!! CCTTGCCATTTGTTTTTGCA+AGG - chr6.1:69395372-69395391 None:intergenic 40.0%
AAGCCCTTGAAGACACACAA+AGG + chr6.1:69398187-69398206 MS.gene57806:CDS 45.0%
ACATCTCAACAGGGCAAGAT+AGG + chr6.1:69396024-69396043 MS.gene57806:CDS 45.0%
ACATGCAGGCAGCTTCAAAA+TGG + chr6.1:69397794-69397813 MS.gene57806:intron 45.0%
AGCCCTTAGGAGTAGATTGA+CGG + chr6.1:69397342-69397361 MS.gene57806:intron 45.0%
AGTCACACCTCCTTGAATTG+TGG - chr6.1:69394356-69394375 None:intergenic 45.0%
ATCAATGAGCTTCTGGCCAA+GGG + chr6.1:69394775-69394794 MS.gene57806:CDS 45.0%
ATCTGTGATGTAGCTGGGTT+TGG - chr6.1:69396528-69396547 None:intergenic 45.0%
ATGTGAACGGGTACTTTGCA+TGG + chr6.1:69398395-69398414 MS.gene57806:CDS 45.0%
CAAAACTTGAATTGCACCGG+TGG + chr6.1:69395189-69395208 MS.gene57806:CDS 45.0%
CAATCTACTCCTAAGGGCTT+AGG - chr6.1:69397341-69397360 None:intergenic 45.0%
CAGCTGTGTCAAGAAATGCT+AGG + chr6.1:69394058-69394077 MS.gene57806:intron 45.0%
CATCTCAACAGGGCAAGATA+GGG + chr6.1:69396025-69396044 MS.gene57806:CDS 45.0%
CCATTTGCCACAATTCAAGG+AGG + chr6.1:69394346-69394365 MS.gene57806:intron 45.0%
CCTCCTTGAATTGTGGCAAA+TGG - chr6.1:69394349-69394368 None:intergenic 45.0%
CGGGTGCATTAGTTGCATAA+TGG - chr6.1:69396493-69396512 None:intergenic 45.0%
CTAGCATTTCTTGACACAGC+TGG - chr6.1:69394060-69394079 None:intergenic 45.0%
CTTATTACTCGCACTTGCAG+AGG - chr6.1:69396724-69396743 None:intergenic 45.0%
CTTCAAGGGCTTTCTCAAGA+GGG - chr6.1:69398179-69398198 None:intergenic 45.0%
GAACCGTCAATCTACTCCTA+AGG - chr6.1:69397348-69397367 None:intergenic 45.0%
GAGGAAGGTCCCAATGAAAA+AGG - chr6.1:69394890-69394909 None:intergenic 45.0%
GCACCATTTGCCACAATTCA+AGG + chr6.1:69394343-69394362 MS.gene57806:intron 45.0%
GCTGCCTGCATGTGTAATAT+AGG - chr6.1:69397787-69397806 None:intergenic 45.0%
GGCAAATGGTGCATTGTGAT+TGG - chr6.1:69394335-69394354 None:intergenic 45.0%
GGGTAGTCTCCTATTGTCAA+TGG - chr6.1:69396362-69396381 None:intergenic 45.0%
GTGGCAAAGGACCAAGTATA+TGG + chr6.1:69393464-69393483 MS.gene57806:CDS 45.0%
GTGTACACAGACATCTCAAC+AGG + chr6.1:69396014-69396033 MS.gene57806:intron 45.0%
GTTGCGTCTTGCATGAGTTT+CGG - chr6.1:69397068-69397087 None:intergenic 45.0%
TCAGGCTACACTTCAAGGTT+TGG + chr6.1:69398445-69398464 MS.gene57806:CDS 45.0%
TCCATCAGCATAAGCATGCT+TGG - chr6.1:69395139-69395158 None:intergenic 45.0%
TCTTCAAGGGCTTTCTCAAG+AGG - chr6.1:69398180-69398199 None:intergenic 45.0%
TGGAATACCTATTGGCCCAA+CGG + chr6.1:69397637-69397656 MS.gene57806:CDS 45.0%
TGGTAATCTACTCCCTACCA+AGG - chr6.1:69396399-69396418 None:intergenic 45.0%
TGTTTCCTTAACCAGTGCTC+CGG + chr6.1:69396286-69396305 MS.gene57806:intron 45.0%
! AACCCTTAGAGCGTCTTCAA+TGG - chr6.1:69395879-69395898 None:intergenic 45.0%
! GGGTTTGGCTTCACTTAACT+CGG - chr6.1:69396513-69396532 None:intergenic 45.0%
! GGTGGAGGTGTAAATAAGGA+AGG + chr6.1:69394730-69394749 MS.gene57806:CDS 45.0%
! GGTTTGGCTTCACTTAACTC+GGG - chr6.1:69396512-69396531 None:intergenic 45.0%
! TATGAAGGTGCAGCCAATGT+TGG + chr6.1:69393442-69393461 MS.gene57806:CDS 45.0%
!! CTTTTAGGAGACTGTTGAGG+TGG + chr6.1:69397226-69397245 MS.gene57806:intron 45.0%
!! GGTGCAATTCAAGTTTTGCC+AGG - chr6.1:69395187-69395206 None:intergenic 45.0%
!!! TATTGTTAATTTAATTTTTT+CGG - chr6.1:69398289-69398308 None:intergenic 5.0%
!!! TCTTTTTTTTTTTTTTTTTA+AGG + chr6.1:69394545-69394564 MS.gene57806:intron 5.0%
!!! TTATATATAACTTTTTTTAA+GGG - chr6.1:69394586-69394605 None:intergenic 5.0%
!!! TTTATATATAACTTTTTTTA+AGG - chr6.1:69394587-69394606 None:intergenic 5.0%
AACTCATGCAAGACGCAACG+AGG + chr6.1:69397069-69397088 MS.gene57806:intron 50.0%
AGGGATGGTGCGAATGTGAA+CGG + chr6.1:69398382-69398401 MS.gene57806:intron 50.0%
ATCAGGATGACGTGGCATTG+TGG + chr6.1:69395802-69395821 MS.gene57806:intron 50.0%
CAAGTAAGCAACGGGAAACC+AGG + chr6.1:69394012-69394031 MS.gene57806:intron 50.0%
CATCAATGAGCTTCTGGCCA+AGG + chr6.1:69394774-69394793 MS.gene57806:CDS 50.0%
CTGGTTTCCCGTTGCTTACT+TGG - chr6.1:69394014-69394033 None:intergenic 50.0%
GCAGAAGGAAAGATTGGTGG+AGG + chr6.1:69394715-69394734 MS.gene57806:intron 50.0%
GCCAAGCATGCTTATGCTGA+TGG + chr6.1:69395135-69395154 MS.gene57806:CDS 50.0%
GCTGATGGAAAGTTAGCACC+TGG + chr6.1:69395150-69395169 MS.gene57806:CDS 50.0%
GGACTTCAGGCTACACTTCA+AGG + chr6.1:69398440-69398459 MS.gene57806:CDS 50.0%
TCAGGATGACGTGGCATTGT+GGG + chr6.1:69395803-69395822 MS.gene57806:intron 50.0%
TCGCGAGACAACCGTGATAA+AGG + chr6.1:69394500-69394519 MS.gene57806:intron 50.0%
TGAGTTGCATCAGGATGACG+TGG + chr6.1:69395794-69395813 MS.gene57806:intron 50.0%
TGGCCAGAAGCTCATTGATG+AGG - chr6.1:69394774-69394793 None:intergenic 50.0%
TGGTCCTTTGCCACCAACAT+TGG - chr6.1:69393458-69393477 None:intergenic 50.0%
! GCTTTCTCAAGAGGGAGTGT+TGG - chr6.1:69398171-69398190 None:intergenic 50.0%
AATCGATACCTCCGGAGCAC+TGG - chr6.1:69396300-69396319 None:intergenic 55.0%
AGCCGCGATATAGGGTTCAG+TGG - chr6.1:69395223-69395242 None:intergenic 55.0%
CGCCACTGAACCCTATATCG+CGG + chr6.1:69395218-69395237 MS.gene57806:CDS 55.0%
CGCGATATAGGGTTCAGTGG+CGG - chr6.1:69395220-69395239 None:intergenic 55.0%
GAGACTACCCTAGCTCCATG+CGG + chr6.1:69396372-69396391 MS.gene57806:CDS 55.0%
GCACATACCGTTGGGCCAAT+AGG - chr6.1:69397647-69397666 None:intergenic 55.0%
GCATGCTTGGCAAAGCTCCA+TGG - chr6.1:69395126-69395145 None:intergenic 55.0%
GGCCTACACGACCTCAAGAA+GGG - chr6.1:69397305-69397324 None:intergenic 55.0%
GGGATGGTGCGAATGTGAAC+GGG + chr6.1:69398383-69398402 MS.gene57806:intron 55.0%
TCATGCAAGACGCAACGAGG+CGG + chr6.1:69397072-69397091 MS.gene57806:intron 55.0%
TTCCTTAACCAGTGCTCCGG+AGG + chr6.1:69396289-69396308 MS.gene57806:intron 55.0%
! GAAGGTGCAGCCAATGTTGG+TGG + chr6.1:69393445-69393464 MS.gene57806:CDS 55.0%
! TTCAGTGGCGGAATCTCCAC+CGG - chr6.1:69395208-69395227 None:intergenic 55.0%
!! GCAGCCAATGTTGGTGGCAA+AGG + chr6.1:69393451-69393470 MS.gene57806:CDS 55.0%
!! TACCTCCGGAGCACTGGTTA+AGG - chr6.1:69396294-69396313 None:intergenic 55.0%
ACCAAGGACCGCATGGAGCT+AGG - chr6.1:69396383-69396402 None:intergenic 60.0%
ACTCCCTACCAAGGACCGCA+TGG - chr6.1:69396390-69396409 None:intergenic 60.0%
AGCTCCATGCGGTCCTTGGT+AGG + chr6.1:69396383-69396402 MS.gene57806:CDS 60.0%
CACCTGGTCGATGTTCACCC+TGG + chr6.1:69395166-69395185 MS.gene57806:CDS 60.0%
CACGACCTCAAGAAGGGCCT+AGG - chr6.1:69397299-69397318 None:intergenic 60.0%
CCAAGGACCGCATGGAGCTA+GGG - chr6.1:69396382-69396401 None:intergenic 60.0%
GACTGTTGAGGTGGCGCCTT+TGG + chr6.1:69397235-69397254 MS.gene57806:intron 60.0%
GCTCCATGCGGTCCTTGGTA+GGG + chr6.1:69396384-69396403 MS.gene57806:CDS 60.0%
GGCCCTTCTTGAGGTCGTGT+AGG + chr6.1:69397300-69397319 MS.gene57806:intron 60.0%
GGCTTAGGCGCTCTCCAGAA+GGG - chr6.1:69397326-69397345 None:intergenic 60.0%
GGGCCTACACGACCTCAAGA+AGG - chr6.1:69397306-69397325 None:intergenic 60.0%
GTTGAGGTGGCGCCTTTGGA+GGG + chr6.1:69397239-69397258 MS.gene57806:intron 60.0%
TGAGGTCGTGTAGGCCCTTC+TGG + chr6.1:69397309-69397328 MS.gene57806:intron 60.0%
TGCCAGGGTGAACATCGACC+AGG - chr6.1:69395171-69395190 None:intergenic 60.0%
TGTTGAGGTGGCGCCTTTGG+AGG + chr6.1:69397238-69397257 MS.gene57806:intron 60.0%
! TTGAGGTGGCGCCTTTGGAG+GGG + chr6.1:69397240-69397259 MS.gene57806:intron 60.0%
!! TGGAGAGCGCCTAAGCCCTT+AGG + chr6.1:69397329-69397348 MS.gene57806:intron 60.0%
CCCTAGCTCCATGCGGTCCT+TGG + chr6.1:69396379-69396398 MS.gene57806:CDS 65.0%
GGGCTTAGGCGCTCTCCAGA+AGG - chr6.1:69397327-69397346 None:intergenic 65.0%
GGGCGCCTAGGCCCTTCTTG+AGG + chr6.1:69397291-69397310 MS.gene57806:intron 70.0%
CCTGGGCCTCAGGGGCCTTC+GGG + chr6.1:69397267-69397286 MS.gene57806:intron 75.0%
GCCTGGGCCTCAGGGGCCTT+CGG + chr6.1:69397266-69397285 MS.gene57806:intron 75.0%
GGCCTCAGGGGCCTTCGGGA+GGG + chr6.1:69397271-69397290 MS.gene57806:intron 75.0%
! GCCTTTGGAGGGGCGCGCCT+GGG + chr6.1:69397250-69397269 MS.gene57806:intron 75.0%
! CCCGAAGGCCCCTGAGGCCC+AGG - chr6.1:69397270-69397289 None:intergenic 80.0%
! CGCCCTCCCGAAGGCCCCTG+AGG - chr6.1:69397276-69397295 None:intergenic 80.0%
! GCCCAGGCGCGCCCCTCCAA+AGG - chr6.1:69397254-69397273 None:intergenic 80.0%
! GGGCCTAGGCGCCCTCCCGA+AGG - chr6.1:69397285-69397304 None:intergenic 80.0%
! GGGCCTCAGGGGCCTTCGGG+AGG + chr6.1:69397270-69397289 MS.gene57806:intron 80.0%
!! AGGGGCGCGCCTGGGCCTCA+GGG + chr6.1:69397258-69397277 MS.gene57806:intron 80.0%
!! CGCCTTTGGAGGGGCGCGCC+TGG + chr6.1:69397249-69397268 MS.gene57806:intron 80.0%
!!! GGGCCTTCGGGAGGGCGCCT+AGG + chr6.1:69397279-69397298 MS.gene57806:intron 80.0%
! GGGGCGCGCCTGGGCCTCAG+GGG + chr6.1:69397259-69397278 MS.gene57806:intron 85.0%
!! GAGGGGCGCGCCTGGGCCTC+AGG + chr6.1:69397257-69397276 MS.gene57806:intron 85.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 69393118 69398579 69393118 ID=MS.gene57806
chr6.1 mRNA 69393118 69398579 69393118 ID=MS.gene57806.t1;Parent=MS.gene57806
chr6.1 exon 69393118 69393276 69393118 ID=MS.gene57806.t1.exon1;Parent=MS.gene57806.t1
chr6.1 CDS 69393118 69393276 69393118 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69393442 69393511 69393442 ID=MS.gene57806.t1.exon2;Parent=MS.gene57806.t1
chr6.1 CDS 69393442 69393511 69393442 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69393699 69393757 69393699 ID=MS.gene57806.t1.exon3;Parent=MS.gene57806.t1
chr6.1 CDS 69393699 69393757 69393699 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69393939 69394014 69393939 ID=MS.gene57806.t1.exon4;Parent=MS.gene57806.t1
chr6.1 CDS 69393939 69394014 69393939 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69394719 69394796 69394719 ID=MS.gene57806.t1.exon5;Parent=MS.gene57806.t1
chr6.1 CDS 69394719 69394796 69394719 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69394868 69394955 69394868 ID=MS.gene57806.t1.exon6;Parent=MS.gene57806.t1
chr6.1 CDS 69394868 69394955 69394868 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69395044 69395299 69395044 ID=MS.gene57806.t1.exon7;Parent=MS.gene57806.t1
chr6.1 CDS 69395044 69395299 69395044 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69396024 69396139 69396024 ID=MS.gene57806.t1.exon8;Parent=MS.gene57806.t1
chr6.1 CDS 69396024 69396139 69396024 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69396349 69396566 69396349 ID=MS.gene57806.t1.exon9;Parent=MS.gene57806.t1
chr6.1 CDS 69396349 69396566 69396349 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69397627 69397658 69397627 ID=MS.gene57806.t1.exon10;Parent=MS.gene57806.t1
chr6.1 CDS 69397627 69397658 69397627 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69397802 69397904 69397802 ID=MS.gene57806.t1.exon11;Parent=MS.gene57806.t1
chr6.1 CDS 69397802 69397904 69397802 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69398148 69398256 69398148 ID=MS.gene57806.t1.exon12;Parent=MS.gene57806.t1
chr6.1 CDS 69398148 69398256 69398148 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
chr6.1 exon 69398384 69398579 69398384 ID=MS.gene57806.t1.exon13;Parent=MS.gene57806.t1
chr6.1 CDS 69398384 69398579 69398384 ID=cds.MS.gene57806.t1;Parent=MS.gene57806.t1
Gene Sequence

>MS.gene57806

ATGGCACTAAATGTTCTTCTTTCTGGAATTGTTGTGATTCTTAACTCTTTGGCTATAATTGATGCTACAATATTGTTAACCAATGATATTAGCAAATCCCTCAATCGAAGTAATTTCCCACAAGGTTTTATTTTTGGAACATCTTCATCTGCATATCAGGTATTCCAAATATTTCAATATTCTTTTACTAGAAAGAGTCAAATCAATAAAAAAAAAATGAAATTCATCTCTTATTTAGTGTTAGAAACATTATAAAAAGTCAACTATACATTTTCTATCTCTAATTTATGTTTCTACTGCTATTAATTTAATCGACAAATTTAGTATGAAGGTGCAGCCAATGTTGGTGGCAAAGGACCAAGTATATGGGATACTTTCACACATAATTATCCAGGTATTTTTCCTCTTTTTTATTTTTTGTTGATGAAGTCTTATGTTTTTTTTTTTTTTCATTTATGATGAGCCACCGGATCTAACTCACATAATTATCCATTACTTTTTTCATTTATGTATTAATTCTACATTCATACTATGTATGTTTTGCTGAAAACACCAACAAATTTTGTTGCTTAACTTTACAGGTAAGATAAAGGACAAAAGTAATGGAGATATAGCCATTGATCAATACCATCGTTATAAGGTTCAATACTAAGATCTAATATGTTACCATGATGTTATAACTTGTGTGTTATAAATTCTCTAAAAAAAAAAAAAACTTGTGTTATTAAGATTATTATAATAATTGTTCAAAAAAAAGGATTATTATAATAACAAAAACAATGATGCTGGATCATAGTTAAGACATTTCTGATATAATGTAGGAAGATGTTGAAATGATGAAGGACATCAATATGGATGCGTATAGATTTTCCATCTCTTGGTCCAGAATACTTCCAAGTAAGCAACGGGAAACCAGGACTAAGAAACAATTTTTAAATGCCAGCTGTGTCAAGAAATGCTAGGGAAACATATTCTCGCTTGATGTAGCATTTTCCTAAAAAAAAAGGAAAATGCTACTTCAAGCGAGAATATGTTTCACGAGCATTTTCAGACATATATAGCTAGCATTTATTGATTGCATGGTTAATTTTTTTTTTATTACAATTGCATGGTTAATTAATTTTTTTTTATTACAATTGCATGGTTAATTAATAAAGAGCAATGCTATATCTCTAGAAAAAAAACATCAAGAATTCTTCAAGAATAAAAAGCAACCAATCACAATGCACCATTTGCCACAATTCAAGGAGGTGTGACTGAAAAATAGGAAGTGGACAAATAAATCATGCAATTAAAACTTGCCACATGTGTCTTCAAAAATTCTTGATGCTATTTTTCTAGATAAATAGCATTTTCCATTAATAAATTGGAGCATGTTTAATTCGCGAGACAACCGTGATAAAGGTTTTCGCGTTATTTAGCATTGCTCTTTTTTTTTTTTTTTTTAAGGTGTGTTTAATGTTTACCCTTAAAAAAAGTTATATATAAAGATGTATCCTTACTATTTTTAAAAAAAAGTTCATCTTTAAATCAAGTCCATATTAGACACCCTATAAATTTATAATATTAATTTACATGTTAAATTCCTTTATTAATTGCAGAAGGAAAGATTGGTGGAGGTGTAAATAAGGAAGGAATCAACTATTACAATAACCTCATCAATGAGCTTCTGGCCAAGGGTAATACCATATGAACTTCTTCTTCATTTAATGATTTTGTCTAAAATACATCAATTGCTATGTCAATGTAGGTCTTCAACCCTTTGTGACCCTTTTTCATTGGGACCTTCCTCAAACTCTTGAAGAAGAATATGGTGGATTTTTAAGTCCTAATATAGTGTAATTCACATCCCATATGACCAAAGATAATCAAATATCATGAAGTTAGGTATATAGTGTTTTTTCCTCTAACTATGATTATATCCAGGAACGACTTTCAAGACTATTCAGAACTTTGTTTTAAAGAATTTGGAGATAGAGTAAAGCATTGGATCACATTGAATGAACCATGGAGCTTTGCCAAGCATGCTTATGCTGATGGAAAGTTAGCACCTGGTCGATGTTCACCCTGGCAAAACTTGAATTGCACCGGTGGAGATTCCGCCACTGAACCCTATATCGCGGCTCATAATCAAATACTTGCTCATGCATCTGCTGTCAATGTCTACAAAACTAAGTATCAGGTTTGAATTTATTTTAATTAAATCAATTCTCGTACGTAGTGTATGTCTTAGATTTTGATGTCTACTCAACCTTGCAAAAACAAATGGCAAGGTAGGGTTTGTACTTTTCTCTAATACGTCCCCTTTATGCTTTGGCTAGCTATTGAGTTATGCGCTATATATGATAGTATATGATAGGTTTTCAAGTTTAGATTGACACGAAATCAATCAACATTACTAGTTTATATAGTAAGAGCATGTCGAGTGTCATAGATATTTCTATAAGTTGATGAACTGTATCTTAATTTTCCAATCCATTGAAGGAGTTTAATGTGCCAAAGTGGTTAGCATAAAAATTGCTGAAGTATTTTAAATAAAGATATTATATCATAGAAATTAATCAACTAATGTTTAACTTTATGACAATATTGAGTAGAAATAAAAAAATAAAAAAATATAAAAATGTGACTTGCTTAAGAGTTGCATAATTATTTACAATTGAAGCTAAATATGTATGAGTTGCATCAGGATGACGTGGCATTGTGGGACTATCTCTTAGTAGTTTATGAAACCCAAAATAAACTCCTTAAAAAATAACCATTGAAGACGCTCTAAGGGTTGCCAACCACTTAATTAAGGCTATTCTTTATACTTAAGTTTTTTTATTCCAATACTATGTATTTCTTCATCAATTAATATCCATATTGACTATTGATACCTTATTTTCTTTACTTTGTGTACACAGACATCTCAACAGGGCAAGATAGGGATAACATTAATGTGTCAGTGGATGGTGCCACTCTATGATACAAAATTGGATCATCATGCTTCACAAAGAGCCATTGATTTCATGTTTGGATGGTAATTAACTACTTTATGAACCATAAATTATATGTGAAACTCAACTATATATAGTAGTAATTATGCAAGACATTAAACTCTTTTAAAGGAGAAGCCTAAACATAAAATAATGTAACTTCATTGTTGACATTTTCAATTACTATATTTGTTTCCTTAACCAGTGCTCCGGAGGTATCGATTAACATTTCTTTTTAAAAAATGTATTGTAGGTTTATGGATCCATTGACAATAGGAGACTACCCTAGCTCCATGCGGTCCTTGGTAGGGAGTAGATTACCAAAGTTTTCTACATATCAAGTAAAGCTTGTAAGAGGGTCCTTTGATTTTATTGGATTAAACTATTATACTTCCCATTATGCAACTAATGCACCCGAGTTAAGTGAAGCCAAACCCAGCTACATCACAGATTCACTTGTTATTCTTACAAGTAAGTGTCTTAGTGATGATATTTTCCATTAATATTAATAATACAGTAGAATACACCTTAGTTTAACACACAGCAAGATTCATTACTATCACATCTTAAATGTGTGACACTCTAATGCATCAATTAATTCAATTTAAAGAAAAAAATAATCATACCTCTGCAAGTGCGAGTAATAAGTCTCACATTGGATAGAAAAGTGGAGGTTAAACACTTTATAAGTGAGAGAGGACCCATAAAATAAGTGGTTAATGTTTTACGTTTTGATGGTTAGTAGGGTATATGTTTTATGTTTTCATGGTTAGTGGGGTATTCTAAATTGTTAATTAAATACATGTGAAATAAGTTGTTAATATCATCCATTTTTGTGGTTAATGGTGTAGTGAAAGTTTTTAATGCCATTATTTTTGTACTTGCAAAAGTACAATAAAAGAATCTAGGGTTTAGACTGTTTATAAGATGCTTTGAGAATTTTTTTGAATCGGCAAAATTTTATTAAAACCGAAACTCATGCAAGACGCAACGAGGCGGTGAAACAACAATACAAAGATGCCTTGAGAATGATCCAAAAAATGGTATTTATAACCCTCTGTGGACTTGTTTTTGCTTGACTTAAGCCCTAAGCAAGCTGTGCTTTAAGTCTTTTCATAGACTTCTAGAAGCTTTTAGGAGACTGTTGAGGTGGCGCCTTTGGAGGGGCGCGCCTGGGCCTCAGGGGCCTTCGGGAGGGCGCCTAGGCCCTTCTTGAGGTCGTGTAGGCCCTTCTGGAGAGCGCCTAAGCCCTTAGGAGTAGATTGACGGTTCAATTTTGTATTTGTGTTATGAAAGTTCTCCAATATTAAAAAAAACGACAAATAAAAGTATTGTTCATATGTATATGTGTAAAAAGTTGTGTTAGAATAAATGTTGTTGTTAATAATTTTTAACTAGCTAGTAGGAGGAAAATTTGGGTGAACATATGAGTATGGGAATAAATTTGAGTGACATGTAACAACTAAATTTAGTGTAAGCAGCTACATATATTTATGTTAACAGTTGACTATTATGTATTTTTTTTTTACAGACAAGCGCAATGGAATACCTATTGGCCCAACGGTATGTGCGTGATAATTAAGTTGTAAACCTAATGTTTTTACATTTTAATTACAAACAATATATAATGCTTATTTCAGTTAGGTTTTCATTTTATATTTTTTTGGACTTCGTTGACATAAAAGGAACCTATATTACACATGCAGGCAGCTTCAAAATGGTTATCAATTTATCCAAAGGGAATTCATGACCTATTGCTCTACATTAAAATAAAGTACAACAACCCGTTGATCTATATCACTGAAAATGGTAATTCTAATACACCAACTAGATTTTCTTTCAATCTATTTCTTTAAGGTGCCAAAGTTAAGCATTGGTTTATACTCAAATTTAGATAGGAAATTTACGTTAGTCGCAGTTATTTCTTTCTAATATACTCCCTATGTTCCTGTATGTAAGCACCATTTGCATCTAATAAAAGAGTGTTTAGATATAGAGACGGAGGGAGTACAATTTTATTGTAAACACATTATATTGTGAATTTATATATAGGCATGGATGATTTTAATGATCCAACACTCCCTCTTGAGAAAGCCCTTGAAGACACACAAAGGATTGATTACTATCATGGTCATCTCTACTATCTTCAAACTGCAATAAAGTATGTGCCCTCAAACTAAAATCTTTGCACCGAAAAAATTAAATTAACAATATCTTTGTAAATTATGGTTGTTAAATAAGTTGTCAATCAAATAGTTGTTCAAATAATTTTATCCAAATTTTACAAGGGATGGTGCGAATGTGAACGGGTACTTTGCATGGTCATTGATTGACAACTTTGAATGGACTTCAGGCTACACTTCAAGGTTTGGAATATACTTTGTAGATTATAACAATGACCTCAAAAGATATCCAAAAATATCAGCCATTTGGTTTAAGGATTTCCTACAACATAGAACAGTTACAAATAGTGATTCACGCTGA
Protein sequence

>MS.gene57806.t1

MALNVLLSGIVVILNSLAIIDATILLTNDISKSLNRSNFPQGFIFGTSSSAYQYEGAANVGGKGPSIWDTFTHNYPGKIKDKSNGDIAIDQYHRYKEDVEMMKDINMDAYRFSISWSRILPKGKIGGGVNKEGINYYNNLINELLAKGLQPFVTLFHWDLPQTLEEEYGGFLSPNIVNDFQDYSELCFKEFGDRVKHWITLNEPWSFAKHAYADGKLAPGRCSPWQNLNCTGGDSATEPYIAAHNQILAHASAVNVYKTKYQTSQQGKIGITLMCQWMVPLYDTKLDHHASQRAIDFMFGWFMDPLTIGDYPSSMRSLVGSRLPKFSTYQVKLVRGSFDFIGLNYYTSHYATNAPELSEAKPSYITDSLVILTNKRNGIPIGPTAASKWLSIYPKGIHDLLLYIKIKYNNPLIYITENGMDDFNDPTLPLEKALEDTQRIDYYHGHLYYLQTAIKDGANVNGYFAWSLIDNFEWTSGYTSRFGIYFVDYNNDLKRYPKISAIWFKDFLQHRTVTNSDSR