Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58462.t1 | XP_003609028.1 | 100 | 152 | 0 | 0 | 4 | 155 | 1 | 152 | 2.60E-84 | 321.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58462.t1 | P35130 | 100.0 | 152 | 0 | 0 | 4 | 155 | 1 | 152 | 6.2e-87 | 321.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58462.t1 | B7FGK6 | 100.0 | 152 | 0 | 0 | 4 | 155 | 1 | 152 | 1.9e-84 | 321.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene060122 | MS.gene58462 | 0.822522 | 2.26E-53 | -1.69E-46 |
MS.gene060125 | MS.gene58462 | 0.80742 | 5.10E-50 | -1.69E-46 |
MS.gene060137 | MS.gene58462 | 0.82451 | 7.76E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene58462 | MS.gene30950 | PPI |
MS.gene58462 | MS.gene017247 | PPI |
MS.gene90484 | MS.gene58462 | PPI |
MS.gene059660 | MS.gene58462 | PPI |
MS.gene58462 | MS.gene26246 | PPI |
MS.gene56807 | MS.gene58462 | PPI |
MS.gene31164 | MS.gene58462 | PPI |
MS.gene75306 | MS.gene58462 | PPI |
MS.gene58462 | MS.gene05127 | PPI |
MS.gene58462 | MS.gene011789 | PPI |
MS.gene015187 | MS.gene58462 | PPI |
MS.gene58462 | MS.gene052128 | PPI |
MS.gene58462 | MS.gene99771 | PPI |
MS.gene98045 | MS.gene58462 | PPI |
MS.gene40316 | MS.gene58462 | PPI |
MS.gene58462 | MS.gene014659 | PPI |
MS.gene58462 | MS.gene009653 | PPI |
MS.gene58462 | MS.gene041043 | PPI |
MS.gene58462 | MS.gene53889 | PPI |
MS.gene58462 | MS.gene049594 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58462.t1 | MTR_4g108080 | 100.000 | 152 | 0 | 0 | 4 | 155 | 1 | 152 | 1.59e-113 | 318 |
MS.gene58462.t1 | MTR_8g468530 | 96.129 | 155 | 6 | 0 | 1 | 155 | 14 | 168 | 2.18e-112 | 316 |
MS.gene58462.t1 | MTR_4g108080 | 100.000 | 110 | 0 | 0 | 4 | 113 | 1 | 110 | 2.46e-80 | 233 |
MS.gene58462.t1 | MTR_4g108080 | 95.690 | 116 | 5 | 0 | 40 | 155 | 37 | 152 | 3.85e-80 | 234 |
MS.gene58462.t1 | MTR_5g075580 | 45.890 | 146 | 74 | 1 | 8 | 153 | 2 | 142 | 3.79e-45 | 145 |
MS.gene58462.t1 | MTR_3g062450 | 45.890 | 146 | 74 | 1 | 8 | 153 | 2 | 142 | 4.42e-45 | 145 |
MS.gene58462.t1 | MTR_8g071040 | 46.575 | 146 | 73 | 1 | 8 | 153 | 2 | 142 | 8.41e-45 | 144 |
MS.gene58462.t1 | MTR_7g116940 | 45.205 | 146 | 75 | 1 | 8 | 153 | 2 | 142 | 1.05e-44 | 144 |
MS.gene58462.t1 | MTR_1g021150 | 45.890 | 146 | 74 | 1 | 8 | 153 | 2 | 142 | 1.33e-44 | 144 |
MS.gene58462.t1 | MTR_4g073240 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 2.24e-43 | 140 |
MS.gene58462.t1 | MTR_7g116940 | 43.137 | 153 | 75 | 2 | 8 | 153 | 2 | 149 | 1.21e-41 | 136 |
MS.gene58462.t1 | MTR_4g076200 | 46.853 | 143 | 75 | 1 | 5 | 147 | 30 | 171 | 1.91e-40 | 134 |
MS.gene58462.t1 | MTR_5g009020 | 45.652 | 138 | 74 | 1 | 10 | 147 | 35 | 171 | 1.29e-38 | 129 |
MS.gene58462.t1 | MTR_4g076200 | 48.800 | 125 | 63 | 1 | 25 | 149 | 9 | 132 | 3.70e-38 | 127 |
MS.gene58462.t1 | MTR_4g094872 | 42.208 | 154 | 82 | 2 | 4 | 150 | 1 | 154 | 7.00e-38 | 127 |
MS.gene58462.t1 | MTR_5g016630 | 41.558 | 154 | 83 | 2 | 4 | 150 | 1 | 154 | 1.73e-37 | 126 |
MS.gene58462.t1 | MTR_2g078010 | 39.416 | 137 | 83 | 0 | 10 | 146 | 8 | 144 | 1.77e-37 | 125 |
MS.gene58462.t1 | MTR_2g078010 | 40.769 | 130 | 77 | 0 | 10 | 139 | 8 | 137 | 3.27e-37 | 125 |
MS.gene58462.t1 | MTR_5g075580 | 48.696 | 115 | 54 | 1 | 39 | 153 | 4 | 113 | 4.74e-36 | 121 |
MS.gene58462.t1 | MTR_1g021150 | 45.600 | 125 | 63 | 1 | 29 | 153 | 31 | 150 | 5.86e-36 | 122 |
MS.gene58462.t1 | MTR_4g073240 | 46.957 | 115 | 56 | 1 | 39 | 153 | 4 | 113 | 2.62e-34 | 116 |
MS.gene58462.t1 | MTR_4g063490 | 39.416 | 137 | 70 | 1 | 28 | 151 | 26 | 162 | 2.90e-34 | 118 |
MS.gene58462.t1 | MTR_7g116940 | 46.296 | 108 | 58 | 0 | 8 | 115 | 2 | 109 | 4.51e-34 | 116 |
MS.gene58462.t1 | MTR_3g110110 | 38.732 | 142 | 83 | 3 | 8 | 145 | 4 | 145 | 1.68e-33 | 115 |
MS.gene58462.t1 | MTR_2g078010 | 35.762 | 151 | 83 | 1 | 10 | 146 | 8 | 158 | 2.08e-33 | 115 |
MS.gene58462.t1 | MTR_1g095510 | 46.281 | 121 | 64 | 1 | 26 | 146 | 7 | 126 | 1.12e-32 | 113 |
MS.gene58462.t1 | MTR_1g095510 | 41.958 | 143 | 81 | 2 | 5 | 146 | 39 | 180 | 1.29e-32 | 114 |
MS.gene58462.t1 | MTR_2g096690 | 36.496 | 137 | 74 | 1 | 28 | 151 | 26 | 162 | 1.70e-30 | 108 |
MS.gene58462.t1 | MTR_7g087590 | 36.029 | 136 | 87 | 0 | 10 | 145 | 13 | 148 | 2.50e-29 | 108 |
MS.gene58462.t1 | MTR_2g078010 | 41.000 | 100 | 59 | 0 | 10 | 109 | 8 | 107 | 6.47e-29 | 102 |
MS.gene58462.t1 | MTR_2g096690 | 36.496 | 137 | 73 | 2 | 28 | 151 | 26 | 161 | 1.41e-28 | 103 |
MS.gene58462.t1 | MTR_8g085690 | 34.848 | 132 | 86 | 0 | 10 | 141 | 25 | 156 | 3.15e-28 | 102 |
MS.gene58462.t1 | MTR_1g095510 | 44.348 | 115 | 63 | 1 | 5 | 118 | 39 | 153 | 1.21e-27 | 101 |
MS.gene58462.t1 | MTR_3g098780 | 34.247 | 146 | 87 | 2 | 9 | 145 | 21 | 166 | 8.91e-27 | 100 |
MS.gene58462.t1 | MTR_3g098780 | 34.507 | 142 | 84 | 2 | 13 | 145 | 1 | 142 | 1.51e-26 | 99.4 |
MS.gene58462.t1 | MTR_8g028920 | 30.201 | 149 | 98 | 3 | 4 | 150 | 1 | 145 | 3.31e-25 | 95.5 |
MS.gene58462.t1 | MTR_4g106690 | 29.530 | 149 | 99 | 3 | 4 | 150 | 1 | 145 | 8.26e-25 | 94.4 |
MS.gene58462.t1 | MTR_8g028920 | 34.951 | 103 | 65 | 2 | 50 | 150 | 4 | 106 | 7.85e-22 | 85.9 |
MS.gene58462.t1 | MTR_8g098595 | 34.259 | 108 | 69 | 2 | 45 | 150 | 23 | 130 | 1.01e-21 | 85.9 |
MS.gene58462.t1 | MTR_5g019480 | 26.797 | 153 | 111 | 1 | 2 | 154 | 24 | 175 | 2.67e-21 | 85.5 |
MS.gene58462.t1 | MTR_5g019480 | 26.797 | 153 | 111 | 1 | 2 | 154 | 27 | 178 | 3.29e-21 | 85.1 |
MS.gene58462.t1 | MTR_5g019480 | 30.088 | 113 | 79 | 0 | 42 | 154 | 15 | 127 | 9.55e-21 | 82.8 |
MS.gene58462.t1 | MTR_4g073240 | 45.679 | 81 | 39 | 1 | 73 | 153 | 5 | 80 | 5.95e-19 | 76.6 |
MS.gene58462.t1 | MTR_2g096690 | 43.478 | 69 | 39 | 0 | 28 | 96 | 26 | 94 | 6.24e-18 | 75.1 |
MS.gene58462.t1 | MTR_4g086440 | 33.571 | 140 | 81 | 4 | 10 | 137 | 37 | 176 | 2.48e-17 | 77.4 |
MS.gene58462.t1 | MTR_7g047570 | 33.571 | 140 | 81 | 4 | 10 | 137 | 38 | 177 | 8.20e-17 | 75.9 |
MS.gene58462.t1 | MTR_7g451770 | 33.571 | 140 | 81 | 4 | 10 | 137 | 38 | 177 | 8.20e-17 | 75.9 |
MS.gene58462.t1 | MTR_8g076490 | 36.449 | 107 | 66 | 2 | 3 | 108 | 11 | 116 | 1.43e-16 | 72.4 |
MS.gene58462.t1 | MTR_7g451800 | 31.410 | 156 | 89 | 5 | 10 | 153 | 38 | 187 | 2.50e-16 | 74.7 |
MS.gene58462.t1 | MTR_7g047620 | 31.410 | 156 | 89 | 5 | 10 | 153 | 38 | 187 | 2.50e-16 | 74.7 |
MS.gene58462.t1 | MTR_5g021260 | 35.514 | 107 | 67 | 2 | 3 | 108 | 11 | 116 | 1.02e-15 | 70.5 |
MS.gene58462.t1 | MTR_8g023380 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 1.32e-15 | 71.6 |
MS.gene58462.t1 | MTR_1g073600 | 26.852 | 108 | 65 | 2 | 39 | 145 | 25 | 119 | 5.45e-14 | 65.1 |
MS.gene58462.t1 | MTR_0274s0030 | 29.932 | 147 | 89 | 5 | 10 | 142 | 114 | 260 | 1.59e-12 | 64.3 |
MS.gene58462.t1 | MTR_4g121960 | 29.231 | 130 | 82 | 4 | 3 | 127 | 6 | 130 | 4.90e-12 | 62.4 |
MS.gene58462.t1 | MTR_1g092460 | 31.973 | 147 | 86 | 6 | 10 | 142 | 177 | 323 | 5.21e-12 | 62.8 |
MS.gene58462.t1 | MTR_1g092465 | 28.667 | 150 | 87 | 7 | 6 | 141 | 238 | 381 | 1.20e-11 | 61.6 |
MS.gene58462.t1 | MTR_2g079270 | 31.148 | 122 | 74 | 4 | 10 | 121 | 307 | 428 | 3.03e-11 | 60.8 |
MS.gene58462.t1 | MTR_1g112730 | 30.081 | 123 | 74 | 4 | 10 | 121 | 856 | 977 | 5.60e-11 | 60.1 |
MS.gene58462.t1 | MTR_4g020620 | 29.268 | 123 | 75 | 3 | 10 | 121 | 629 | 750 | 8.04e-11 | 59.7 |
MS.gene58462.t1 | MTR_2g013650 | 29.268 | 123 | 75 | 3 | 10 | 121 | 682 | 803 | 8.40e-11 | 59.3 |
MS.gene58462.t1 | MTR_4g020620 | 29.268 | 123 | 75 | 3 | 10 | 121 | 571 | 692 | 8.92e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58462.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 4 | 155 | 1 | 152 | 8.65e-112 | 314 |
MS.gene58462.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 4 | 155 | 1 | 152 | 8.65e-112 | 314 |
MS.gene58462.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 4 | 155 | 1 | 152 | 8.65e-112 | 314 |
MS.gene58462.t1 | AT2G02760 | 98.684 | 152 | 2 | 0 | 4 | 155 | 1 | 152 | 8.65e-112 | 314 |
MS.gene58462.t1 | AT1G14400 | 97.368 | 152 | 4 | 0 | 4 | 155 | 1 | 152 | 9.47e-111 | 311 |
MS.gene58462.t1 | AT1G14400 | 97.368 | 152 | 4 | 0 | 4 | 155 | 1 | 152 | 9.47e-111 | 311 |
MS.gene58462.t1 | AT5G62540 | 86.000 | 150 | 21 | 0 | 4 | 153 | 1 | 150 | 1.60e-98 | 280 |
MS.gene58462.t1 | AT4G27960 | 45.205 | 146 | 75 | 1 | 8 | 153 | 2 | 142 | 4.99e-45 | 145 |
MS.gene58462.t1 | AT1G64230 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 1.11e-44 | 144 |
MS.gene58462.t1 | AT1G64230 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 1.11e-44 | 144 |
MS.gene58462.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 8 | 153 | 2 | 142 | 1.21e-44 | 144 |
MS.gene58462.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 8 | 153 | 2 | 142 | 1.21e-44 | 144 |
MS.gene58462.t1 | AT5G53300 | 45.205 | 146 | 75 | 1 | 8 | 153 | 2 | 142 | 1.21e-44 | 144 |
MS.gene58462.t1 | AT4G27960 | 45.205 | 146 | 75 | 1 | 8 | 153 | 32 | 172 | 3.55e-44 | 144 |
MS.gene58462.t1 | AT3G08690 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 4.38e-44 | 142 |
MS.gene58462.t1 | AT3G08690 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 4.38e-44 | 142 |
MS.gene58462.t1 | AT2G16740 | 43.151 | 146 | 78 | 1 | 8 | 153 | 2 | 142 | 7.81e-44 | 142 |
MS.gene58462.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 8 | 153 | 2 | 142 | 1.13e-43 | 141 |
MS.gene58462.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 8 | 153 | 2 | 142 | 1.13e-43 | 141 |
MS.gene58462.t1 | AT5G41700 | 43.836 | 146 | 77 | 1 | 8 | 153 | 2 | 142 | 1.13e-43 | 141 |
MS.gene58462.t1 | AT3G08700 | 46.259 | 147 | 73 | 2 | 8 | 153 | 2 | 143 | 3.83e-43 | 140 |
MS.gene58462.t1 | AT3G08700 | 46.259 | 147 | 73 | 2 | 8 | 153 | 2 | 143 | 3.83e-43 | 140 |
MS.gene58462.t1 | AT5G56150 | 44.521 | 146 | 76 | 1 | 8 | 153 | 2 | 142 | 6.21e-43 | 139 |
MS.gene58462.t1 | AT1G64230 | 43.226 | 155 | 74 | 3 | 8 | 153 | 2 | 151 | 1.09e-41 | 136 |
MS.gene58462.t1 | AT5G41700 | 43.537 | 147 | 77 | 2 | 8 | 153 | 2 | 143 | 1.37e-41 | 136 |
MS.gene58462.t1 | AT3G20060 | 46.429 | 140 | 74 | 1 | 10 | 149 | 39 | 177 | 2.79e-39 | 131 |
MS.gene58462.t1 | AT1G50490 | 47.143 | 140 | 73 | 1 | 10 | 149 | 38 | 176 | 2.33e-38 | 129 |
MS.gene58462.t1 | AT1G16890 | 40.146 | 137 | 82 | 0 | 10 | 146 | 8 | 144 | 4.44e-38 | 127 |
MS.gene58462.t1 | AT3G20060 | 49.194 | 124 | 62 | 1 | 26 | 149 | 10 | 132 | 7.33e-38 | 126 |
MS.gene58462.t1 | AT1G78870 | 40.146 | 137 | 82 | 0 | 10 | 146 | 8 | 144 | 8.92e-38 | 126 |
MS.gene58462.t1 | AT1G64230 | 34.574 | 188 | 76 | 2 | 8 | 153 | 2 | 184 | 2.15e-36 | 124 |
MS.gene58462.t1 | AT1G64230 | 34.574 | 188 | 76 | 2 | 8 | 153 | 2 | 184 | 2.15e-36 | 124 |
MS.gene58462.t1 | AT1G16890 | 38.356 | 146 | 81 | 1 | 10 | 146 | 8 | 153 | 1.43e-35 | 121 |
MS.gene58462.t1 | AT3G57870 | 40.000 | 145 | 80 | 2 | 8 | 145 | 6 | 150 | 8.21e-35 | 119 |
MS.gene58462.t1 | AT5G59300 | 39.416 | 137 | 70 | 1 | 28 | 151 | 26 | 162 | 2.34e-33 | 115 |
MS.gene58462.t1 | AT5G25760 | 39.130 | 138 | 80 | 3 | 8 | 141 | 4 | 141 | 5.56e-33 | 114 |
MS.gene58462.t1 | AT5G25760 | 39.130 | 138 | 80 | 3 | 8 | 141 | 4 | 141 | 5.56e-33 | 114 |
MS.gene58462.t1 | AT3G46460 | 39.416 | 137 | 70 | 1 | 28 | 151 | 26 | 162 | 1.04e-32 | 114 |
MS.gene58462.t1 | AT5G41700 | 44.340 | 106 | 59 | 0 | 8 | 113 | 2 | 107 | 1.51e-32 | 113 |
MS.gene58462.t1 | AT3G55380 | 38.686 | 137 | 71 | 1 | 28 | 151 | 27 | 163 | 3.04e-32 | 113 |
MS.gene58462.t1 | AT5G53300 | 45.545 | 101 | 55 | 0 | 8 | 108 | 2 | 102 | 3.43e-32 | 111 |
MS.gene58462.t1 | AT5G56150 | 43.519 | 108 | 61 | 0 | 8 | 115 | 2 | 109 | 1.62e-31 | 109 |
MS.gene58462.t1 | AT3G13550 | 35.766 | 137 | 88 | 0 | 10 | 146 | 39 | 175 | 2.31e-31 | 111 |
MS.gene58462.t1 | AT1G36340 | 46.087 | 115 | 62 | 0 | 34 | 148 | 34 | 148 | 1.40e-30 | 108 |
MS.gene58462.t1 | AT1G36340 | 46.087 | 115 | 62 | 0 | 34 | 148 | 34 | 148 | 1.40e-30 | 108 |
MS.gene58462.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 10 | 145 | 13 | 148 | 2.79e-30 | 110 |
MS.gene58462.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 10 | 145 | 13 | 148 | 2.79e-30 | 110 |
MS.gene58462.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 10 | 145 | 13 | 148 | 2.79e-30 | 110 |
MS.gene58462.t1 | AT5G05080 | 36.029 | 136 | 87 | 0 | 10 | 145 | 13 | 148 | 2.79e-30 | 110 |
MS.gene58462.t1 | AT1G16890 | 42.593 | 108 | 62 | 0 | 39 | 146 | 4 | 111 | 4.86e-30 | 105 |
MS.gene58462.t1 | AT1G78870 | 40.952 | 105 | 62 | 0 | 10 | 114 | 8 | 112 | 6.58e-30 | 105 |
MS.gene58462.t1 | AT1G78870 | 42.593 | 108 | 62 | 0 | 39 | 146 | 4 | 111 | 1.16e-29 | 105 |
MS.gene58462.t1 | AT1G78870 | 44.118 | 102 | 56 | 1 | 39 | 139 | 4 | 105 | 8.08e-28 | 100 |
MS.gene58462.t1 | AT5G50870 | 35.211 | 142 | 83 | 2 | 13 | 145 | 1 | 142 | 2.29e-27 | 101 |
MS.gene58462.t1 | AT3G13550 | 38.393 | 112 | 69 | 0 | 10 | 121 | 39 | 150 | 1.32e-26 | 99.0 |
MS.gene58462.t1 | AT2G46030 | 30.872 | 149 | 97 | 3 | 4 | 150 | 1 | 145 | 1.96e-26 | 98.6 |
MS.gene58462.t1 | AT2G46030 | 30.872 | 149 | 97 | 3 | 4 | 150 | 1 | 145 | 1.96e-26 | 98.6 |
MS.gene58462.t1 | AT3G24515 | 34.641 | 153 | 87 | 2 | 11 | 150 | 10 | 162 | 3.93e-26 | 102 |
MS.gene58462.t1 | AT3G46460 | 39.823 | 113 | 55 | 1 | 52 | 151 | 8 | 120 | 4.97e-26 | 95.9 |
MS.gene58462.t1 | AT3G46460 | 39.823 | 113 | 55 | 1 | 52 | 151 | 8 | 120 | 4.97e-26 | 95.9 |
MS.gene58462.t1 | AT5G50870 | 37.500 | 128 | 71 | 2 | 13 | 131 | 1 | 128 | 6.49e-26 | 97.8 |
MS.gene58462.t1 | AT2G46030 | 30.667 | 150 | 98 | 3 | 3 | 150 | 72 | 217 | 8.62e-26 | 99.0 |
MS.gene58462.t1 | AT1G63800 | 34.000 | 150 | 91 | 4 | 4 | 150 | 1 | 145 | 1.55e-25 | 96.3 |
MS.gene58462.t1 | AT5G41340 | 34.000 | 150 | 91 | 4 | 4 | 150 | 1 | 145 | 3.84e-25 | 95.5 |
MS.gene58462.t1 | AT3G55380 | 30.409 | 171 | 72 | 2 | 28 | 151 | 27 | 197 | 7.85e-25 | 95.1 |
MS.gene58462.t1 | AT2G46030 | 33.333 | 120 | 78 | 2 | 33 | 150 | 29 | 148 | 1.21e-24 | 94.4 |
MS.gene58462.t1 | AT2G46030 | 33.333 | 120 | 78 | 2 | 33 | 150 | 29 | 148 | 1.21e-24 | 94.4 |
MS.gene58462.t1 | AT1G63800 | 37.037 | 108 | 66 | 2 | 45 | 150 | 23 | 130 | 3.43e-24 | 92.4 |
MS.gene58462.t1 | AT3G24515 | 38.393 | 112 | 65 | 1 | 43 | 150 | 76 | 187 | 1.26e-22 | 92.8 |
MS.gene58462.t1 | AT5G41340 | 36.275 | 102 | 63 | 2 | 51 | 150 | 9 | 110 | 5.82e-22 | 86.3 |
MS.gene58462.t1 | AT4G36800 | 27.451 | 153 | 110 | 1 | 2 | 154 | 25 | 176 | 1.23e-21 | 86.3 |
MS.gene58462.t1 | AT4G36800 | 27.451 | 153 | 110 | 1 | 2 | 154 | 25 | 176 | 1.23e-21 | 86.3 |
MS.gene58462.t1 | AT2G18600 | 29.054 | 148 | 104 | 1 | 1 | 148 | 25 | 171 | 1.68e-21 | 85.9 |
MS.gene58462.t1 | AT2G18600 | 29.054 | 148 | 104 | 1 | 1 | 148 | 25 | 171 | 1.68e-21 | 85.9 |
MS.gene58462.t1 | AT2G32790 | 32.653 | 147 | 94 | 2 | 3 | 146 | 25 | 169 | 3.65e-19 | 79.7 |
MS.gene58462.t1 | AT1G45050 | 35.593 | 118 | 66 | 3 | 1 | 109 | 1 | 117 | 1.95e-16 | 72.4 |
MS.gene58462.t1 | AT1G75440 | 35.514 | 107 | 67 | 2 | 3 | 108 | 11 | 116 | 5.02e-16 | 71.2 |
MS.gene58462.t1 | AT5G42990 | 33.898 | 118 | 68 | 3 | 1 | 109 | 1 | 117 | 1.43e-15 | 70.1 |
MS.gene58462.t1 | AT4G36410 | 33.645 | 107 | 69 | 2 | 3 | 108 | 11 | 116 | 1.70e-15 | 69.7 |
MS.gene58462.t1 | AT5G50430 | 30.597 | 134 | 81 | 4 | 10 | 138 | 8 | 134 | 1.76e-15 | 71.2 |
MS.gene58462.t1 | AT5G50430 | 30.597 | 134 | 81 | 4 | 10 | 138 | 8 | 134 | 1.76e-15 | 71.2 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 31.092 | 119 | 73 | 3 | 10 | 123 | 8 | 122 | 3.67e-15 | 70.5 |
MS.gene58462.t1 | AT1G17280 | 27.273 | 121 | 81 | 1 | 10 | 123 | 8 | 128 | 2.97e-14 | 68.2 |
MS.gene58462.t1 | AT1G53025 | 31.081 | 148 | 81 | 5 | 10 | 136 | 274 | 421 | 6.11e-14 | 68.6 |
MS.gene58462.t1 | AT1G53025 | 31.081 | 148 | 81 | 5 | 10 | 136 | 274 | 421 | 6.63e-14 | 68.6 |
MS.gene58462.t1 | AT3G17000 | 28.467 | 137 | 85 | 4 | 7 | 138 | 11 | 139 | 1.52e-12 | 63.9 |
MS.gene58462.t1 | AT1G45050 | 34.951 | 103 | 57 | 3 | 1 | 94 | 1 | 102 | 3.79e-12 | 60.1 |
MS.gene58462.t1 | AT2G16920 | 30.894 | 123 | 73 | 4 | 10 | 121 | 853 | 974 | 9.09e-12 | 62.4 |
MS.gene58462.t1 | AT2G16920 | 30.894 | 123 | 73 | 4 | 10 | 121 | 853 | 974 | 9.09e-12 | 62.4 |
MS.gene58462.t1 | AT1G53023 | 27.703 | 148 | 86 | 4 | 10 | 136 | 60 | 207 | 2.16e-11 | 60.8 |
Find 42 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGAGTTTGCAGGAGAATT+TGG | 0.151098 | 8.4:+18994519 | None:intergenic |
CTGTGGAATGCTGTTATATT+TGG | 0.236507 | 8.4:-18997594 | MS.gene58462:CDS |
CAGAGTTTGCAGGAGAATTT+GGG | 0.319027 | 8.4:+18994520 | None:intergenic |
TACTGTTTGGATGAAACATT+CGG | 0.376250 | 8.4:+18996162 | None:intergenic |
CGTACAGTGGGTGGCTTGTT+CGG | 0.389561 | 8.4:+18996194 | None:intergenic |
AGGAATTAGTGGTGCTCCTC+AGG | 0.412828 | 8.4:-18997631 | MS.gene58462:CDS |
TGCAGATGGAAGTATTTGTC+TGG | 0.414767 | 8.4:-18996059 | MS.gene58462:CDS |
ACTGTTTGGATGAAACATTC+GGG | 0.426596 | 8.4:+18996163 | None:intergenic |
CTCATCAGTCTCTTCCTAGC+TGG | 0.440813 | 8.4:+18997687 | None:intergenic |
GACCCACCTGCAGGAATTAG+TGG | 0.459602 | 8.4:-18997642 | MS.gene58462:CDS |
TGTGGAATGCTGTTATATTT+GGG | 0.459892 | 8.4:-18997593 | MS.gene58462:intron |
TTTGCAGGAGAATTTGGGTT+GGG | 0.465291 | 8.4:+18994525 | None:intergenic |
TGCGATTCTCACTTCTATCC+AGG | 0.480462 | 8.4:-18995996 | MS.gene58462:intron |
GATAATCCTCGGAAAATTGA+AGG | 0.484718 | 8.4:+18996216 | None:intergenic |
CGAGCCGCTTCAGAGTTTGC+AGG | 0.492725 | 8.4:+18994510 | None:intergenic |
CTCTGAACAGTTTATGCAGA+TGG | 0.494635 | 8.4:-18996073 | MS.gene58462:intron |
TCGTAGAGTGCGGGAAGTTG+TGG | 0.496064 | 8.4:-18994457 | MS.gene58462:CDS |
ATCGCAGCAACATCATATAT+AGG | 0.498248 | 8.4:+18996013 | None:intergenic |
CCATCCCATGGAGTATCATC+AGG | 0.520795 | 8.4:+18997416 | None:intergenic |
CAGAGTTGGACAGCTGACTA+AGG | 0.541375 | 8.4:-18994432 | None:intergenic |
TGAGTACAATCGTAGAGTGC+GGG | 0.565704 | 8.4:-18994466 | MS.gene58462:CDS |
GCAGTCCTGATGATACTCCA+TGG | 0.566145 | 8.4:-18997421 | MS.gene58462:intron |
TTCTCCTGCAAACTCTGAAG+CGG | 0.568993 | 8.4:-18994514 | MS.gene58462:CDS |
TTGCAACATGACCCACCTGC+AGG | 0.570976 | 8.4:-18997651 | MS.gene58462:CDS |
GGAGCACCACTAATTCCTGC+AGG | 0.573494 | 8.4:+18997636 | None:intergenic |
GGGAAGTTGTGGAGCAGAGT+TGG | 0.573831 | 8.4:-18994446 | MS.gene58462:CDS |
TGGCTTGTTCGGATAATCCT+CGG | 0.581252 | 8.4:+18996205 | None:intergenic |
GTTTGCAGGAGAATTTGGGT+TGG | 0.582593 | 8.4:+18994524 | None:intergenic |
GCACCACTAATTCCTGCAGG+TGG | 0.583819 | 8.4:+18997639 | None:intergenic |
CCTGATGATACTCCATGGGA+TGG | 0.589928 | 8.4:-18997416 | MS.gene58462:CDS |
TGGATATATTGCAAAATCAG+TGG | 0.599561 | 8.4:-18996039 | MS.gene58462:CDS |
CGGGAAACAAATCGTACAGT+GGG | 0.600227 | 8.4:+18996182 | None:intergenic |
TATCGATGTCGACTCCAGCT+AGG | 0.611943 | 8.4:-18997701 | MS.gene58462:CDS |
ACTGACTCACCTCCATCCCA+TGG | 0.613625 | 8.4:+18997404 | None:intergenic |
GAAACAAATCGTACAGTGGG+TGG | 0.628016 | 8.4:+18996185 | None:intergenic |
CACCACTAATTCCTGCAGGT+GGG | 0.640442 | 8.4:+18997640 | None:intergenic |
AGGATAACAATATCATGCTG+TGG | 0.645864 | 8.4:-18997611 | MS.gene58462:CDS |
CAGTCCTGATGATACTCCAT+GGG | 0.646431 | 8.4:-18997420 | MS.gene58462:CDS |
GATGATACTCCATGGGATGG+AGG | 0.662516 | 8.4:-18997413 | MS.gene58462:intron |
GTGAGTACAATCGTAGAGTG+CGG | 0.663013 | 8.4:-18994467 | MS.gene58462:CDS |
AGCATGATATTGTTATCCTG+AGG | 0.673403 | 8.4:+18997615 | None:intergenic |
TCGGGAAACAAATCGTACAG+TGG | 0.686954 | 8.4:+18996181 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTAATATTGAAAAACAA+AGG | + | chr8.4:18995615-18995634 | None:intergenic | 10.0% |
!! | TTAGATTAATGAAAATTAAA+TGG | - | chr8.4:18996443-18996462 | MS.gene58462:intron | 10.0% |
!!! | AATATTTTTTTTTTTTGTCA+AGG | - | chr8.4:18995046-18995065 | MS.gene58462:intron | 10.0% |
!! | TCCAAATACAATAATATAAT+GGG | + | chr8.4:18997456-18997475 | None:intergenic | 15.0% |
!! | TTCCAAATACAATAATATAA+TGG | + | chr8.4:18997457-18997476 | None:intergenic | 15.0% |
!!! | AGTTTTTTAAAATCTAAAAC+TGG | - | chr8.4:18995548-18995567 | MS.gene58462:intron | 15.0% |
!! | AAAAAAATTAAGAGCAATCT+CGG | + | chr8.4:18995395-18995414 | None:intergenic | 20.0% |
!! | AAATAAGTATGCTAAACAAA+GGG | + | chr8.4:18996736-18996755 | None:intergenic | 20.0% |
!! | AAGTTTGATTCTATTTAGTA+TGG | + | chr8.4:18997501-18997520 | None:intergenic | 20.0% |
!! | TATCATTTGATATTTCACAT+AGG | + | chr8.4:18997210-18997229 | None:intergenic | 20.0% |
!! | TCCCATTATATTATTGTATT+TGG | - | chr8.4:18997452-18997471 | MS.gene58462:intron | 20.0% |
!! | TTGTTCTGACTTATAAATTA+TGG | + | chr8.4:18996356-18996375 | None:intergenic | 20.0% |
!!! | AATACAATAATATAATGGGA+TGG | + | chr8.4:18997452-18997471 | None:intergenic | 20.0% |
!!! | ACTTTGTTTAAGTATATGAA+TGG | - | chr8.4:18994658-18994677 | MS.gene58462:intron | 20.0% |
!!! | AGATGTAATAATTTTCTTTG+TGG | - | chr8.4:18997385-18997404 | MS.gene58462:intron | 20.0% |
!!! | ATACAATAATATAATGGGAT+GGG | + | chr8.4:18997451-18997470 | None:intergenic | 20.0% |
!!! | GATTGCTCTTAATTTTTTTT+AGG | - | chr8.4:18995396-18995415 | MS.gene58462:intron | 20.0% |
!!! | GTATATATTTTGAGTTATTC+AGG | - | chr8.4:18995885-18995904 | MS.gene58462:intron | 20.0% |
!!! | TTAATTCTCATTTTTCAAAG+AGG | + | chr8.4:18997103-18997122 | None:intergenic | 20.0% |
! | AAAAAATTAAGAGCAATCTC+GGG | + | chr8.4:18995394-18995413 | None:intergenic | 25.0% |
! | AAAACTACAAAAAGCAATAC+AGG | + | chr8.4:18996872-18996891 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | + | chr8.4:18995080-18995099 | None:intergenic | 25.0% |
! | AATACTTGTAACACACAAAA+TGG | + | chr8.4:18994823-18994842 | None:intergenic | 25.0% |
! | AATTGCAGGTTATTGAAAAA+TGG | + | chr8.4:18997344-18997363 | None:intergenic | 25.0% |
! | ATCAAAACATGTTGTACATT+TGG | - | chr8.4:18995758-18995777 | MS.gene58462:intron | 25.0% |
! | ATTAAATGGAAATGCCAAAT+AGG | - | chr8.4:18996457-18996476 | MS.gene58462:intron | 25.0% |
! | GAAATAAGTATGCTAAACAA+AGG | + | chr8.4:18996737-18996756 | None:intergenic | 25.0% |
! | TATAATCAATGAGATACACA+TGG | - | chr8.4:18996386-18996405 | MS.gene58462:intron | 25.0% |
! | TCAAAACATGTTGTACATTT+GGG | - | chr8.4:18995759-18995778 | MS.gene58462:intron | 25.0% |
! | TTAAATGGAAATGCCAAATA+GGG | - | chr8.4:18996458-18996477 | MS.gene58462:intron | 25.0% |
! | TTATTGTATTTGGAAGTTTC+CGG | - | chr8.4:18997462-18997481 | MS.gene58462:intron | 25.0% |
! | TTGAATAGTAAAGTCCAATT+TGG | - | chr8.4:18994868-18994887 | MS.gene58462:intron | 25.0% |
!! | AAAATCTTTTATAGGATGGA+AGG | + | chr8.4:18995489-18995508 | None:intergenic | 25.0% |
!! | TCCATCCTATAAAAGATTTT+GGG | - | chr8.4:18995489-18995508 | MS.gene58462:intron | 25.0% |
!! | TTCCATCCTATAAAAGATTT+TGG | - | chr8.4:18995488-18995507 | MS.gene58462:intron | 25.0% |
!! | TTTTTATACTAGTGTCAGTT+AGG | - | chr8.4:18994789-18994808 | MS.gene58462:intron | 25.0% |
!!! | AATTTTAAGACTGTTTTGGA+GGG | - | chr8.4:18997043-18997062 | MS.gene58462:intron | 25.0% |
!!! | TACAACATGTTTTGATTTGA+TGG | + | chr8.4:18995754-18995773 | None:intergenic | 25.0% |
AAAACATGTTGTACATTTGG+GGG | - | chr8.4:18995761-18995780 | MS.gene58462:intron | 30.0% | |
AAAGGGAATCATTTCAAAAC+AGG | + | chr8.4:18996520-18996539 | None:intergenic | 30.0% | |
AAGGGAATCATTTCAAAACA+GGG | + | chr8.4:18996519-18996538 | None:intergenic | 30.0% | |
ACACTATACTAAATGATACC+TGG | + | chr8.4:18996164-18996183 | None:intergenic | 30.0% | |
AGAAAATAATCACACAATGC+TGG | + | chr8.4:18997553-18997572 | None:intergenic | 30.0% | |
ATGTTAATATTAGCCGAACT+TGG | - | chr8.4:18995421-18995440 | MS.gene58462:intron | 30.0% | |
CAAAACATGTTGTACATTTG+GGG | - | chr8.4:18995760-18995779 | MS.gene58462:intron | 30.0% | |
CCAATTCTCATCAAAGAAAT+TGG | + | chr8.4:18996591-18996610 | None:intergenic | 30.0% | |
CCAATTTCTTTGATGAGAAT+TGG | - | chr8.4:18996588-18996607 | MS.gene58462:intron | 30.0% | |
GAAAAAGACAGTAAACTTTG+TGG | + | chr8.4:18996996-18997015 | None:intergenic | 30.0% | |
GAAAGAGAAATCTACAAAAC+AGG | + | chr8.4:18996912-18996931 | None:intergenic | 30.0% | |
TACTGTTTGGATGAAACATT+CGG | + | chr8.4:18995980-18995999 | None:intergenic | 30.0% | |
TATGTTGCAAAGAACATCAT+AGG | - | chr8.4:18995463-18995482 | MS.gene58462:intron | 30.0% | |
TATTGTATTTGGAAGTTTCC+GGG | - | chr8.4:18997463-18997482 | MS.gene58462:intron | 30.0% | |
TCATCCAAACAGTAAGTATT+AGG | - | chr8.4:18995986-18996005 | MS.gene58462:intron | 30.0% | |
TCTTAAGTCTGATATGCAAA+TGG | - | chr8.4:18996800-18996819 | MS.gene58462:intron | 30.0% | |
TGAGAATTAAACCTGTTATG+AGG | - | chr8.4:18997113-18997132 | MS.gene58462:intron | 30.0% | |
TGATATGCAAGTATTCAATG+TGG | - | chr8.4:18997290-18997309 | MS.gene58462:intron | 30.0% | |
TGGATATATTGCAAAATCAG+TGG | - | chr8.4:18996100-18996119 | MS.gene58462:intron | 30.0% | |
TGTGGAAAACAAACATAACA+AGG | + | chr8.4:18996978-18996997 | None:intergenic | 30.0% | |
TGTGGAATGCTGTTATATTT+GGG | - | chr8.4:18994546-18994565 | MS.gene58462:intron | 30.0% | |
TTCTCATCAAAGAAATTGGA+AGG | + | chr8.4:18996587-18996606 | None:intergenic | 30.0% | |
TTGAACTGTGCAATTCATAT+TGG | - | chr8.4:18996644-18996663 | MS.gene58462:intron | 30.0% | |
! | ACCCAAAATCTTTTATAGGA+TGG | + | chr8.4:18995493-18995512 | None:intergenic | 30.0% |
! | AGCAACCCAAAATCTTTTAT+AGG | + | chr8.4:18995497-18995516 | None:intergenic | 30.0% |
! | AGTTCCTCGCATTTTATATA+GGG | - | chr8.4:18994949-18994968 | MS.gene58462:intron | 30.0% |
! | ATCTCATTGATTATATGCTC+TGG | + | chr8.4:18996381-18996400 | None:intergenic | 30.0% |
! | CAAAGTTTACTGTCTTTTTC+TGG | - | chr8.4:18996996-18997015 | MS.gene58462:intron | 30.0% |
! | TAACCCTCAGATTTTCATAT+GGG | + | chr8.4:18995021-18995040 | None:intergenic | 30.0% |
! | TTAACCCTCAGATTTTCATA+TGG | + | chr8.4:18995022-18995041 | None:intergenic | 30.0% |
!! | ATAAGTTTTGTGAGACTGTT+TGG | + | chr8.4:18995334-18995353 | None:intergenic | 30.0% |
!! | ATTTTGTCTGAGACTGAATT+GGG | + | chr8.4:18994915-18994934 | None:intergenic | 30.0% |
!! | TAAGTTTTGTGAGACTGTTT+GGG | + | chr8.4:18995333-18995352 | None:intergenic | 30.0% |
!! | TATTTTGTCTGAGACTGAAT+TGG | + | chr8.4:18994916-18994935 | None:intergenic | 30.0% |
!!! | AGGGAATTTTAAGACTGTTT+TGG | - | chr8.4:18997039-18997058 | MS.gene58462:intron | 30.0% |
!!! | ATTTTAAGACTGTTTTGGAG+GGG | - | chr8.4:18997044-18997063 | MS.gene58462:intron | 30.0% |
!!! | GAATTTTAAGACTGTTTTGG+AGG | - | chr8.4:18997042-18997061 | MS.gene58462:intron | 30.0% |
!!! | TTTTTTTTGTCAAGGACTGA+AGG | - | chr8.4:18995054-18995073 | MS.gene58462:intron | 30.0% |
AAAGCAATACAGGAGAAAGA+AGG | + | chr8.4:18996862-18996881 | None:intergenic | 35.0% | |
AAATGCCAAATAGGGTGAAT+GGG | - | chr8.4:18996466-18996485 | MS.gene58462:intron | 35.0% | |
AAGCAATACAGGAGAAAGAA+GGG | + | chr8.4:18996861-18996880 | None:intergenic | 35.0% | |
AATGCTGGTCAATACATAAC+AGG | + | chr8.4:18997538-18997557 | None:intergenic | 35.0% | |
AATTCCCTAGTAAACAGAAG+TGG | + | chr8.4:18997027-18997046 | None:intergenic | 35.0% | |
ACTGTAATATCTGCCAATGA+TGG | + | chr8.4:18997176-18997195 | None:intergenic | 35.0% | |
ACTGTTTGGATGAAACATTC+GGG | + | chr8.4:18995979-18995998 | None:intergenic | 35.0% | |
ACTTAAACTGTTCAGTGCAA+AGG | + | chr8.4:18996556-18996575 | None:intergenic | 35.0% | |
AGAGAAATCTACAAAACAGG+AGG | + | chr8.4:18996909-18996928 | None:intergenic | 35.0% | |
AGAGCAGCAATTACATTAGT+TGG | + | chr8.4:18996050-18996069 | None:intergenic | 35.0% | |
AGCATGATATTGTTATCCTG+AGG | + | chr8.4:18994527-18994546 | None:intergenic | 35.0% | |
AGGATAACAATATCATGCTG+TGG | - | chr8.4:18994528-18994547 | MS.gene58462:CDS | 35.0% | |
AGGGAATCATTTCAAAACAG+GGG | + | chr8.4:18996518-18996537 | None:intergenic | 35.0% | |
ATATCACACTCTTGCATCAA+GGG | + | chr8.4:18997276-18997295 | None:intergenic | 35.0% | |
ATCGCAGCAACATCATATAT+AGG | + | chr8.4:18996129-18996148 | None:intergenic | 35.0% | |
ATTCCCTAGTAAACAGAAGT+GGG | + | chr8.4:18997026-18997045 | None:intergenic | 35.0% | |
ATTGTATTTGGAAGTTTCCG+GGG | - | chr8.4:18997464-18997483 | MS.gene58462:intron | 35.0% | |
CAAAGCAATGACTGTCAAAA+AGG | + | chr8.4:18997590-18997609 | None:intergenic | 35.0% | |
CTGTGGAATGCTGTTATATT+TGG | - | chr8.4:18994545-18994564 | MS.gene58462:intron | 35.0% | |
CTTAAACTGTTCAGTGCAAA+GGG | + | chr8.4:18996555-18996574 | None:intergenic | 35.0% | |
GACACAACTAACAGATAAGA+AGG | + | chr8.4:18996025-18996044 | None:intergenic | 35.0% | |
GATAATCCTCGGAAAATTGA+AGG | + | chr8.4:18995926-18995945 | None:intergenic | 35.0% | |
GCTTGCAACCTAAAAATCTA+AGG | - | chr8.4:18996947-18996966 | MS.gene58462:intron | 35.0% | |
TATAGCACAAGCGATTATCA+TGG | - | chr8.4:18995107-18995126 | MS.gene58462:intron | 35.0% | |
TCCAAACAGTAAGTATTAGG+TGG | - | chr8.4:18995989-18996008 | MS.gene58462:intron | 35.0% | |
TCCACCTAATACTTACTGTT+TGG | + | chr8.4:18995993-18996012 | None:intergenic | 35.0% | |
TCTCCCATATGAAAATCTGA+GGG | - | chr8.4:18995015-18995034 | MS.gene58462:intron | 35.0% | |
TGTACCCTATATAAAATGCG+AGG | + | chr8.4:18994956-18994975 | None:intergenic | 35.0% | |
TTAAACTGTTCAGTGCAAAG+GGG | + | chr8.4:18996554-18996573 | None:intergenic | 35.0% | |
TTAAATCAGCCAATCCAAAC+AGG | - | chr8.4:18995368-18995387 | MS.gene58462:intron | 35.0% | |
TTCTGTAGTTTCTTTGTTCG+TGG | - | chr8.4:18996754-18996773 | MS.gene58462:intron | 35.0% | |
! | AGGCTCTTCCTTAGATTTTT+AGG | + | chr8.4:18996958-18996977 | None:intergenic | 35.0% |
! | ATGCCATCTAAAACCAAGTT+CGG | + | chr8.4:18995437-18995456 | None:intergenic | 35.0% |
! | CAGTTCCTCGCATTTTATAT+AGG | - | chr8.4:18994948-18994967 | MS.gene58462:intron | 35.0% |
! | GCTTTAATGTTTTCCTGTGT+GGG | - | chr8.4:18997233-18997252 | MS.gene58462:intron | 35.0% |
!! | TAAAACTGGCTTCTGTTTTG+TGG | - | chr8.4:18995562-18995581 | MS.gene58462:intron | 35.0% |
AAAGGGGGGTTGAAGAAAAA+AGG | + | chr8.4:18996538-18996557 | None:intergenic | 40.0% | |
AAGGGGGGTTGAAGAAAAAA+GGG | + | chr8.4:18996537-18996556 | None:intergenic | 40.0% | |
AATGCCAAATAGGGTGAATG+GGG | - | chr8.4:18996467-18996486 | MS.gene58462:intron | 40.0% | |
AGCAATACAGGAGAAAGAAG+GGG | + | chr8.4:18996860-18996879 | None:intergenic | 40.0% | |
ATTGGGCCGTAAGAAAAATG+CGG | + | chr8.4:18994898-18994917 | None:intergenic | 40.0% | |
CAATTACTCAGCTTCTACAC+TGG | - | chr8.4:18997359-18997378 | MS.gene58462:intron | 40.0% | |
CAGAGTTTGCAGGAGAATTT+GGG | + | chr8.4:18997622-18997641 | None:intergenic | 40.0% | |
CATATCACACTCTTGCATCA+AGG | + | chr8.4:18997277-18997296 | None:intergenic | 40.0% | |
CCCTCTATCATTATAGCAGA+GGG | - | chr8.4:18994983-18995002 | MS.gene58462:intron | 40.0% | |
CCCTCTGCTATAATGATAGA+GGG | + | chr8.4:18994986-18995005 | None:intergenic | 40.0% | |
CTCTGAACAGTTTATGCAGA+TGG | - | chr8.4:18996066-18996085 | MS.gene58462:CDS | 40.0% | |
GAAATGCCAAATAGGGTGAA+TGG | - | chr8.4:18996465-18996484 | MS.gene58462:intron | 40.0% | |
GCTGTTATATTTGGGTGAGT+TGG | - | chr8.4:18994554-18994573 | MS.gene58462:intron | 40.0% | |
GTATGGAGATAAAAGTTCCC+CGG | + | chr8.4:18997484-18997503 | None:intergenic | 40.0% | |
GTCTCCCATATGAAAATCTG+AGG | - | chr8.4:18995014-18995033 | MS.gene58462:intron | 40.0% | |
TAAACTGTTCAGTGCAAAGG+GGG | + | chr8.4:18996553-18996572 | None:intergenic | 40.0% | |
TATGAATGACTCTGCGATGA+AGG | - | chr8.4:18996413-18996432 | MS.gene58462:intron | 40.0% | |
TCAGAGTTTGCAGGAGAATT+TGG | + | chr8.4:18997623-18997642 | None:intergenic | 40.0% | |
TCCCTCTATCATTATAGCAG+AGG | - | chr8.4:18994982-18995001 | MS.gene58462:intron | 40.0% | |
TCCCTCTGCTATAATGATAG+AGG | + | chr8.4:18994987-18995006 | None:intergenic | 40.0% | |
TCTCCCACTTCTGTTTACTA+GGG | - | chr8.4:18997020-18997039 | MS.gene58462:intron | 40.0% | |
TGTAGAAGCTGAGTAATTGC+AGG | + | chr8.4:18997358-18997377 | None:intergenic | 40.0% | |
TTCTCCCACTTCTGTTTACT+AGG | - | chr8.4:18997019-18997038 | MS.gene58462:intron | 40.0% | |
! | CGCTTTAATGTTTTCCTGTG+TGG | - | chr8.4:18997232-18997251 | MS.gene58462:intron | 40.0% |
! | TTTGCAGGAGAATTTGGGTT+GGG | + | chr8.4:18997617-18997636 | None:intergenic | 40.0% |
!! | TGCAGATGGAAGTATTTGTC+TGG | - | chr8.4:18996080-18996099 | MS.gene58462:intron | 40.0% |
!!! | GATTTTGGGTTGCTCTAGAT+AGG | - | chr8.4:18995503-18995522 | MS.gene58462:intron | 40.0% |
!!! | TAGCCGAACTTGGTTTTAGA+TGG | - | chr8.4:18995431-18995450 | MS.gene58462:intron | 40.0% |
AAAAATGCGGGGGACCAAAT+TGG | + | chr8.4:18994885-18994904 | None:intergenic | 45.0% | |
AAACTGTTCAGTGCAAAGGG+GGG | + | chr8.4:18996552-18996571 | None:intergenic | 45.0% | |
ACTATCAGCACACAGTCCTT+TGG | + | chr8.4:18997145-18997164 | None:intergenic | 45.0% | |
ATAGTCTGCAAGGCCATCAT+TGG | - | chr8.4:18997160-18997179 | MS.gene58462:intron | 45.0% | |
CAGTCCTGATGATACTCCAT+GGG | - | chr8.4:18994719-18994738 | MS.gene58462:intron | 45.0% | |
CGGGAAACAAATCGTACAGT+GGG | + | chr8.4:18995960-18995979 | None:intergenic | 45.0% | |
CTATCAGCACACAGTCCTTT+GGG | + | chr8.4:18997144-18997163 | None:intergenic | 45.0% | |
CTCTGCTTTCTTGTCTGCTT+TGG | - | chr8.4:18994692-18994711 | MS.gene58462:intron | 45.0% | |
GAAACAAATCGTACAGTGGG+TGG | + | chr8.4:18995957-18995976 | None:intergenic | 45.0% | |
GAGTCAGGAAGACGAAGATT+AGG | + | chr8.4:18997415-18997434 | None:intergenic | 45.0% | |
GCAATACAGGAGAAAGAAGG+GGG | + | chr8.4:18996859-18996878 | None:intergenic | 45.0% | |
GGATGTTAAAGAGTGGAGTC+AGG | + | chr8.4:18997430-18997449 | None:intergenic | 45.0% | |
GTGAGTACAATCGTAGAGTG+CGG | - | chr8.4:18997672-18997691 | MS.gene58462:CDS | 45.0% | |
GTGCAAATGTAGCCTGTAAC+AGG | + | chr8.4:18995680-18995699 | None:intergenic | 45.0% | |
GTTTGCAGGAGAATTTGGGT+TGG | + | chr8.4:18997618-18997637 | None:intergenic | 45.0% | |
TCGGGAAACAAATCGTACAG+TGG | + | chr8.4:18995961-18995980 | None:intergenic | 45.0% | |
TGAAGGGTCAACTAGCTGAA+AGG | - | chr8.4:18997070-18997089 | MS.gene58462:intron | 45.0% | |
TGAGTACAATCGTAGAGTGC+GGG | - | chr8.4:18997673-18997692 | MS.gene58462:CDS | 45.0% | |
TGCGATTCTCACTTCTATCC+AGG | - | chr8.4:18996143-18996162 | MS.gene58462:intron | 45.0% | |
TGGGATGGGATGTTAAAGAG+TGG | + | chr8.4:18997437-18997456 | None:intergenic | 45.0% | |
TTCTTTGTTCGTGGCTGCTA+AGG | - | chr8.4:18996763-18996782 | MS.gene58462:intron | 45.0% | |
TTGGGCCGTAAGAAAAATGC+GGG | + | chr8.4:18994897-18994916 | None:intergenic | 45.0% | |
! | GTTGAGCCTTCAATTTTCCG+AGG | - | chr8.4:18995917-18995936 | MS.gene58462:intron | 45.0% |
! | TGTTATGAGGTGCTTCCCAA+AGG | - | chr8.4:18997126-18997145 | MS.gene58462:intron | 45.0% |
! | TGTTTTCCTGTGTGGGATCA+CGG | - | chr8.4:18997240-18997259 | MS.gene58462:intron | 45.0% |
! | TTCTCCTGCAAACTCTGAAG+CGG | - | chr8.4:18997625-18997644 | MS.gene58462:CDS | 45.0% |
! | TTTGGGATGAAAACAGCGCA+TGG | + | chr8.4:18995316-18995335 | None:intergenic | 45.0% |
!! | TGGCTTGTTCGGATAATCCT+CGG | + | chr8.4:18995937-18995956 | None:intergenic | 45.0% |
!! | TTTGGGAAGCACCTCATAAC+AGG | + | chr8.4:18997127-18997146 | None:intergenic | 45.0% |
!!! | TGTTTTGGAGGGGTTGTGAA+GGG | - | chr8.4:18997054-18997073 | MS.gene58462:intron | 45.0% |
AATCTCGGGCCTGTTTGGAT+TGG | + | chr8.4:18995380-18995399 | None:intergenic | 50.0% | |
AGGAATTAGTGGTGCTCCTC+AGG | - | chr8.4:18994508-18994527 | MS.gene58462:CDS | 50.0% | |
CACCACTAATTCCTGCAGGT+GGG | + | chr8.4:18994502-18994521 | None:intergenic | 50.0% | |
CCTGATGATACTCCATGGGA+TGG | - | chr8.4:18994723-18994742 | MS.gene58462:intron | 50.0% | |
CTCACCCCATTCACCCTATT+TGG | + | chr8.4:18996474-18996493 | None:intergenic | 50.0% | |
CTCATCAGTCTCTTCCTAGC+TGG | + | chr8.4:18994455-18994474 | None:intergenic | 50.0% | |
GATGATACTCCATGGGATGG+AGG | - | chr8.4:18994726-18994745 | MS.gene58462:intron | 50.0% | |
GCAGTCCTGATGATACTCCA+TGG | - | chr8.4:18994718-18994737 | MS.gene58462:intron | 50.0% | |
TCAAGGACTGAAGGCCTGTT+TGG | - | chr8.4:18995063-18995082 | MS.gene58462:intron | 50.0% | |
TGGGCCGTAAGAAAAATGCG+GGG | + | chr8.4:18994896-18994915 | None:intergenic | 50.0% | |
! | CCATCCCATGGAGTATCATC+AGG | + | chr8.4:18994726-18994745 | None:intergenic | 50.0% |
! | CTCTTGCATCAAGGGCACAT+TGG | + | chr8.4:18997268-18997287 | None:intergenic | 50.0% |
! | CTGTGTGCTGATAGTCTGCA+AGG | - | chr8.4:18997150-18997169 | MS.gene58462:intron | 50.0% |
! | GGTCCCCCGCATTTTTCTTA+CGG | - | chr8.4:18994889-18994908 | MS.gene58462:intron | 50.0% |
!! | TATCGATGTCGACTCCAGCT+AGG | - | chr8.4:18994438-18994457 | MS.gene58462:CDS | 50.0% |
!!! | CTGTTTTGGAGGGGTTGTGA+AGG | - | chr8.4:18997053-18997072 | MS.gene58462:intron | 50.0% |
AGAGCAATCTCGGGCCTGTT+TGG | + | chr8.4:18995385-18995404 | None:intergenic | 55.0% | |
CTACCTGATGCGCCTGTTAC+AGG | - | chr8.4:18995665-18995684 | MS.gene58462:intron | 55.0% | |
GACCCACCTGCAGGAATTAG+TGG | - | chr8.4:18994497-18994516 | MS.gene58462:CDS | 55.0% | |
GCACCACTAATTCCTGCAGG+TGG | + | chr8.4:18994503-18994522 | None:intergenic | 55.0% | |
GGGAAGTTGTGGAGCAGAGT+TGG | - | chr8.4:18997693-18997712 | MS.gene58462:CDS | 55.0% | |
GGGCCGTAAGAAAAATGCGG+GGG | + | chr8.4:18994895-18994914 | None:intergenic | 55.0% | |
TAGCCTGTAACAGGCGCATC+AGG | + | chr8.4:18995671-18995690 | None:intergenic | 55.0% | |
TCGTAGAGTGCGGGAAGTTG+TGG | - | chr8.4:18997682-18997701 | MS.gene58462:CDS | 55.0% | |
TTGCAACATGACCCACCTGC+AGG | - | chr8.4:18994488-18994507 | MS.gene58462:CDS | 55.0% | |
TTGGAACCGTGATCCCACAC+AGG | + | chr8.4:18997249-18997268 | None:intergenic | 55.0% | |
! | ACTGACTCACCTCCATCCCA+TGG | + | chr8.4:18994738-18994757 | None:intergenic | 55.0% |
! | GGAGCACCACTAATTCCTGC+AGG | + | chr8.4:18994506-18994525 | None:intergenic | 55.0% |
!! | CGTACAGTGGGTGGCTTGTT+CGG | + | chr8.4:18995948-18995967 | None:intergenic | 55.0% |
CGAGCCGCTTCAGAGTTTGC+AGG | + | chr8.4:18997632-18997651 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 18994434 | 18997727 | 18994434 | ID=MS.gene58462 |
chr8.4 | mRNA | 18994434 | 18997727 | 18994434 | ID=MS.gene58462.t1;Parent=MS.gene58462 |
chr8.4 | exon | 18997594 | 18997727 | 18997594 | ID=MS.gene58462.t1.exon1;Parent=MS.gene58462.t1 |
chr8.4 | CDS | 18997594 | 18997727 | 18997594 | ID=cds.MS.gene58462.t1;Parent=MS.gene58462.t1 |
chr8.4 | exon | 18997414 | 18997439 | 18997414 | ID=MS.gene58462.t1.exon2;Parent=MS.gene58462.t1 |
chr8.4 | CDS | 18997414 | 18997439 | 18997414 | ID=cds.MS.gene58462.t1;Parent=MS.gene58462.t1 |
chr8.4 | exon | 18996165 | 18996254 | 18996165 | ID=MS.gene58462.t1.exon3;Parent=MS.gene58462.t1 |
chr8.4 | CDS | 18996165 | 18996254 | 18996165 | ID=cds.MS.gene58462.t1;Parent=MS.gene58462.t1 |
chr8.4 | exon | 18995997 | 18996085 | 18995997 | ID=MS.gene58462.t1.exon4;Parent=MS.gene58462.t1 |
chr8.4 | CDS | 18995997 | 18996085 | 18995997 | ID=cds.MS.gene58462.t1;Parent=MS.gene58462.t1 |
chr8.4 | exon | 18994434 | 18994562 | 18994434 | ID=MS.gene58462.t1.exon5;Parent=MS.gene58462.t1 |
chr8.4 | CDS | 18994434 | 18994562 | 18994434 | ID=cds.MS.gene58462.t1;Parent=MS.gene58462.t1 |
Gene Sequence |
Protein sequence |